Lcy02g012770.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy02g012770.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	MYB transcription factor
Location	Chr02: 38047720 .. 38048655 (+)
Sequence length	840
RNA-Seq Expression	Lcy02g012770.1
Synteny	Lcy02g012770.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATAAAAAAGAGACTAGATTGTGTACACTCCCCTATCCCTCCATCTCCCTCTCAAAGAAAATGGGAAGAACATCATCATGTTGTTCCAAAGGAGGCTTACACAAAGGGCCTTGGACTGCCAGAGAAGATGCATTGCTTGTCAACTATATTCAAGAACATGGTGAAGGCCATTGGAGAGCTTTGCCAAAGAAAGCTGGTGAGTTCTTCTTCAATCCTCTTTTTTTTTTTAACTTCCTTCAAGCTCCATTCATGGAATTTAATTTAAAAAAATGTTCTCCATGAATGAATTTAGGTTTGCTTAGATGTGGGAAGAGTTGCAGATTGAGATGGATGAACTATCTCCGACCCGACATTAAACGCGGCAACATAACCGCCGACGAGGACGACTTGATTATAAAACTCCACTCTCTTCTCGGCAACCGGTGGTCCCTCATTGCTGGGAGACTCCCCGGTCGAACCGACAACGAGATAAAAAACTACTGGAACTCCCATCTCAGCAAAAGGTTGGCTGTTGCAACAGAAAAGGCAGGAGAGTTAAAGAAGGAAAAGATCATCATCACTTCAAACTCTGAGAATGGAGAGACATCAAACAGCAGAAAACCAACCCAAGTTTCGCCGTTTTGCAACGACGATAACTCGTGCGGCGGTGTGGCGAGCGGAGTGCCGTTGTTGTCGGGAAATCCGGGAGGTGACGGTGGCGGAGCTGAGACTGAGTTGGCTGTGAATGAAGGAGAGAATCAGAAGGAACTGGAAGAAAGTGAGGATCTTTTTGGTGGATGTGAGGTGTTCTATAAAGGGTCATGGAGTTGTTCTGCAAATGGTGAGATGATTGATGAGGTTGAAGATGATTCTTATCAGCAGTTACTCAACCTCCAAGGAGAAGATTATATTCAATTAGAATCCTTCATTGATTACTTCTTAATCTGAGTATATT

mRNA sequence

TATATAAAAAAGAGACTAGATTGTGTACACTCCCCTATCCCTCCATCTCCCTCTCAAAGAAAATGGGAAGAACATCATCATGTTGTTCCAAAGGAGGCTTACACAAAGGGCCTTGGACTGCCAGAGAAGATGCATTGCTTGTCAACTATATTCAAGAACATGGTGAAGGCCATTGGAGAGCTTTGCCAAAGAAAGCTGGTTTGCTTAGATGTGGGAAGAGTTGCAGATTGAGATGGATGAACTATCTCCGACCCGACATTAAACGCGGCAACATAACCGCCGACGAGGACGACTTGATTATAAAACTCCACTCTCTTCTCGGCAACCGGTGGTCCCTCATTGCTGGGAGACTCCCCGGTCGAACCGACAACGAGATAAAAAACTACTGGAACTCCCATCTCAGCAAAAGGTTGGCTGTTGCAACAGAAAAGGCAGGAGAGTTAAAGAAGGAAAAGATCATCATCACTTCAAACTCTGAGAATGGAGAGACATCAAACAGCAGAAAACCAACCCAAGTTTCGCCGTTTTGCAACGACGATAACTCGTGCGGCGGTGTGGCGAGCGGAGTGCCGTTGTTGTCGGGAAATCCGGGAGGTGACGGTGGCGGAGCTGAGACTGAGTTGGCTGTGAATGAAGGAGAGAATCAGAAGGAACTGGAAGAAAGTGAGGATCTTTTTGGTGGATGTGAGGTGTTCTATAAAGGGTCATGGAGTTGTTCTGCAAATGGTGAGATGATTGATGAGGTTGAAGATGATTCTTATCAGCAGTTACTCAACCTCCAAGGAGAAGATTATATTCAATTAGAATCCTTCATTGATTACTTCTTAATCTGAGTATATT

Coding sequence (CDS)

ATGGGAAGAACATCATCATGTTGTTCCAAAGGAGGCTTACACAAAGGGCCTTGGACTGCCAGAGAAGATGCATTGCTTGTCAACTATATTCAAGAACATGGTGAAGGCCATTGGAGAGCTTTGCCAAAGAAAGCTGGTTTGCTTAGATGTGGGAAGAGTTGCAGATTGAGATGGATGAACTATCTCCGACCCGACATTAAACGCGGCAACATAACCGCCGACGAGGACGACTTGATTATAAAACTCCACTCTCTTCTCGGCAACCGGTGGTCCCTCATTGCTGGGAGACTCCCCGGTCGAACCGACAACGAGATAAAAAACTACTGGAACTCCCATCTCAGCAAAAGGTTGGCTGTTGCAACAGAAAAGGCAGGAGAGTTAAAGAAGGAAAAGATCATCATCACTTCAAACTCTGAGAATGGAGAGACATCAAACAGCAGAAAACCAACCCAAGTTTCGCCGTTTTGCAACGACGATAACTCGTGCGGCGGTGTGGCGAGCGGAGTGCCGTTGTTGTCGGGAAATCCGGGAGGTGACGGTGGCGGAGCTGAGACTGAGTTGGCTGTGAATGAAGGAGAGAATCAGAAGGAACTGGAAGAAAGTGAGGATCTTTTTGGTGGATGTGAGGTGTTCTATAAAGGGTCATGGAGTTGTTCTGCAAATGGTGAGATGATTGATGAGGTTGAAGATGATTCTTATCAGCAGTTACTCAACCTCCAAGGAGAAGATTATATTCAATTAGAATCCTTCATTGATTACTTCTTAATCTGA

Protein sequence

MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVATEKAGELKKEKIIITSNSENGETSNSRKPTQVSPFCNDDNSCGGVASGVPLLSGNPGGDGGGAETELAVNEGENQKELEESEDLFGGCEVFYKGSWSCSANGEMIDEVEDDSYQQLLNLQGEDYIQLESFIDYFLI

Homology

[Close]

BLAST of Lcy02g012770.1 vs. ExPASy Swiss-Prot
Match: Q38850 (Transcription repressor MYB5 OS=Arabidopsis thaliana OX=3702 GN=MYB5 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 7.0e-51
Identity = 83/115 (72.17%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 3   RTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMNYL 62
           +T+ CC+K G+ +GPWT  ED +LV++I++ GEG WR+LPK+AGLLRCGKSCRLRWMNYL
Sbjct: 13  KTTPCCTKMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYL 72

Query: 63  RPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRL 118
           RP +KRG IT+DE+DLI++LH LLGNRWSLIAGR+PGRTDNEIKNYWN+HL K+L
Sbjct: 73  RPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKL 127

[Close]

BLAST of Lcy02g012770.1 vs. ExPASy Swiss-Prot
Match: Q9S9K9 (Transcription factor MYB3 OS=Arabidopsis thaliana OX=3702 GN=MYB3 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.7e-50
Identity = 87/117 (74.36%), Postives = 102/117 (87.18%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR S CC K  ++KG WT  ED LLV+YI++HGEG WR+LP+ AGL RCGKSCRLRWMN
Sbjct: 1   MGR-SPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRL 118
           YLRPD+KRGN T +ED+LIIKLHSLLGN+WSLIAGRLPGRTDNEIKNYWN+H+ ++L
Sbjct: 61  YLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of Lcy02g012770.1 vs. ExPASy Swiss-Prot
Match: P27898 (Myb-related protein P OS=Zea mays OX=4577 GN=P PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.5e-50
Identity = 88/117 (75.21%), Postives = 100/117 (85.47%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRT  CC K GL +G WTA ED LL NYI EHGEG WR+LPK AGLLRCGKSCRLRW+N
Sbjct: 1   MGRT-PCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRL 118
           YLR D+KRGNI+ +E+D+IIKLH+ LGNRWSLIA  LPGRTDNEIKNYWNSHLS+++
Sbjct: 61  YLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 116

[Close]

BLAST of Lcy02g012770.1 vs. ExPASy Swiss-Prot
Match: Q9FJ07 (Transcription factor MYB111 OS=Arabidopsis thaliana OX=3702 GN=MYB111 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.9e-50
Identity = 94/152 (61.84%), Postives = 116/152 (76.32%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR + CC K GL +G WTA ED +L  YIQ +GEG WR+LPKKAGLLRCGKSCRLRW+N
Sbjct: 1   MGR-APCCEKIGLKRGRWTAEEDEILTKYIQTNGEGSWRSLPKKAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVA 120
           YLR D+KRGNIT+DE+++I+KLHSLLGNRWSLIA  LPGRTDNEIKNYWNSHLS+++   
Sbjct: 61  YLRRDLKRGNITSDEEEIIVKLHSLLGNRWSLIATHLPGRTDNEIKNYWNSHLSRKIYAF 120

Query: 121 TEKAGE----LKKEKIIITSNSENGETSNSRK 149
           T  +G+    L  + ++  S S +    N+ K
Sbjct: 121 TAVSGDGHNLLVNDVVLKKSCSSSSGAKNNNK 151

[Close]

BLAST of Lcy02g012770.1 vs. ExPASy Swiss-Prot
Match: Q38851 (Transcription repressor MYB6 OS=Arabidopsis thaliana OX=3702 GN=MYB6 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.0e-49
Identity = 87/117 (74.36%), Postives = 99/117 (84.62%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR S CC K   +KG WT  ED  LV+YI+ HGEG WR+LPK AGLLRCGKSCRLRW+N
Sbjct: 1   MGR-SPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRL 118
           YLRPD+KRGN T DED +IIKLHSLLGN+WSLIAGRLPGRTDNEIKNYWN+H+ ++L
Sbjct: 61  YLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of Lcy02g012770.1 vs. ExPASy TrEMBL
Match: A0A6J1E0Q2 (transcription factor MYB8-like OS=Momordica charantia OX=3673 GN=LOC111024867 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 5.5e-115
Identity = 214/260 (82.31%), Postives = 230/260 (88.46%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRTSSCCS GGLHKGPWTAREDALLVNYIQ+HGEGHWR+LPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGRTSSCCSNGGLHKGPWTAREDALLVNYIQQHGEGHWRSLPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAV- 120
           YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAV 
Sbjct: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVT 120

Query: 121 ATEKA-GELKKEKIIITSNSENGETSNSRKPTQVSPFCNDDNSCGGVASGVPLLSGNP-- 180
           ATE    + +KE+I I SNSENGE+S + KPT+VS FC++DNS  GVAS +PL SGNP  
Sbjct: 121 ATENTRNQARKERITIPSNSENGESSKTTKPTRVSSFCDEDNSSSGVASALPLSSGNPGG 180

Query: 181 GGDGGGAETELAVNEGENQKELEESEDLFGGCEVFYKGSWSCSANGEMIDEVEDDSYQQL 240
           GG GGGAE ELA  +GE +K   ES DLFGGCE+ Y GSW+CSANGEMIDEVEDDSYQQL
Sbjct: 181 GGGGGGAEIELAA-KGEEEK--IESGDLFGGCEILYGGSWNCSANGEMIDEVEDDSYQQL 240

Query: 241 LNLQGEDYIQLESFIDYFLI 257
            NLQGEDYIQL+SFIDYFLI
Sbjct: 241 FNLQGEDYIQLDSFIDYFLI 257

[Close]

BLAST of Lcy02g012770.1 vs. ExPASy TrEMBL
Match: A0A6J1ELE7 (transcription factor WER-like OS=Cucurbita moschata OX=3662 GN=LOC111435631 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 6.7e-113
Identity = 209/262 (79.77%), Postives = 229/262 (87.40%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRTSSCCSKGGLHKGPWTAREDALLV+YIQ+HGEGHWRALPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVA 120
           YLRPDIKRGNIT DEDDLIIKLH+LLGNRWSLIAGRLPGRTDNEIKNYWNSHLSK+LA+ 
Sbjct: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLAIT 120

Query: 121 TEKAGELKKEKIIITSNSENGETSNSRKPTQVSPFCNDDNSCGGVASGVPLLSGNPGGDG 180
            + AGE KKEK +IT+NS NGETS+SRKP +VS   N DNS  G+ASG+P LSGN G  G
Sbjct: 121 KDNAGEAKKEK-VITTNSANGETSDSRKPARVS---NGDNSSTGMASGLPFLSGNQG--G 180

Query: 181 GGAETELAVNEG------ENQKELEESEDLFGGCEVFYKGSWSCSANGEMIDEVEDDSYQ 240
           GG    LAVN G      + ++E+EES DLFGGCEVFY+GSW+CS NGE I+EVEDDSYQ
Sbjct: 181 GGETDRLAVNGGGEIEKLKGREEMEESGDLFGGCEVFYEGSWNCSENGERIEEVEDDSYQ 240

Query: 241 QLLNLQGEDYIQLESFIDYFLI 257
           QLL+LQGEDYIQLESFIDYFLI
Sbjct: 241 QLLSLQGEDYIQLESFIDYFLI 256

[Close]

BLAST of Lcy02g012770.1 vs. ExPASy TrEMBL
Match: A0A6J1I0W3 (transcription factor MYB8-like OS=Cucurbita maxima OX=3661 GN=LOC111468870 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.6e-111
Identity = 207/262 (79.01%), Postives = 228/262 (87.02%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRTSSCCSKGGLHKGPWTAREDALLV+YIQ+HGEGHWRALPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVA 120
           YLRPDIKRGNIT DEDDLIIKLH+LLGNRWSLIAGRLPGRTDNEIKNYWNSHLSK+LA+ 
Sbjct: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLAIT 120

Query: 121 TEKAGELKKEKIIITSNSENGETSNSRKPTQVSPFCNDDNSCGGVASGVPLLSGNPGGDG 180
            + AGE K++  IIT+NS NGETS+SRKP +VS   N DNS  G+ASG+P LSGN G  G
Sbjct: 121 KDNAGEAKEK--IITTNSPNGETSDSRKPARVS---NGDNSGSGMASGLPFLSGNQG--G 180

Query: 181 GGAETELAVNEG------ENQKELEESEDLFGGCEVFYKGSWSCSANGEMIDEVEDDSYQ 240
           GG    LAVN G      + ++E+EES DLFGGCEVFY+GSW+CS NGE I+EVEDDSYQ
Sbjct: 181 GGETDRLAVNGGGEIEKLKGREEMEESGDLFGGCEVFYEGSWNCSENGERIEEVEDDSYQ 240

Query: 241 QLLNLQGEDYIQLESFIDYFLI 257
           QLL+LQGEDYIQLESFIDYFLI
Sbjct: 241 QLLSLQGEDYIQLESFIDYFLI 255

[Close]

BLAST of Lcy02g012770.1 vs. ExPASy TrEMBL
Match: A0A5A7TGY6 (Transcription factor WER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001650 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.5e-109
Identity = 207/271 (76.38%), Postives = 223/271 (82.29%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRTSSCCSKGGLHKGPWTAREDALLVNYIQ++GEGHWRALPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQQNGEGHWRALPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVA 120
           YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLA+ 
Sbjct: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAIT 120

Query: 121 TEKAGELKKEKIIITSNSENGETSNSRKPTQVSPFCNDDNSCGGVASGVPLLSGNPGGD- 180
            + AGE KKE         NGETSN+RKPT+VS FCNDDNS  G+ S + L SGN GG+ 
Sbjct: 121 KDNAGETKKE--------SNGETSNTRKPTEVSSFCNDDNSSNGIGSELLLSSGNQGGED 180

Query: 181 ----GGGAETE-LAVNEGE--------NQKELEESEDLFGGCEVFYKG-SWSCSANGEMI 240
               GGG ET+ L VN  E         ++ELEES D FGGCE  YKG SW+ S NGE +
Sbjct: 181 GGSRGGGGETDRLGVNGDEEIIEKVKAGREELEESGDFFGGCEGLYKGLSWNGSENGERV 240

Query: 241 DEVEDDSYQQLLNLQGEDYIQLESFIDYFLI 257
           DE+EDDSYQQLLNL+GEDYIQLESFIDYFLI
Sbjct: 241 DEIEDDSYQQLLNLEGEDYIQLESFIDYFLI 263

[Close]

BLAST of Lcy02g012770.1 vs. ExPASy TrEMBL
Match: A0A1S3AU00 (transcription factor WER-like OS=Cucumis melo OX=3656 GN=LOC103482846 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.9e-108
Identity = 206/271 (76.01%), Postives = 222/271 (81.92%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRTSSCCSKGGLHKGPWTAREDALLVNYIQ++GEGHWRALPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQQNGEGHWRALPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVA 120
           YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLA+ 
Sbjct: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAIT 120

Query: 121 TEKAGELKKEKIIITSNSENGETSNSRKPTQVSPFCNDDNSCGGVASGVPLLSGNPGGD- 180
            + AGE KKE         NGETSN+RKPT+VS FCNDDNS  G+ S + L SGN GG+ 
Sbjct: 121 KDNAGETKKE--------SNGETSNTRKPTEVSSFCNDDNSSNGIGSELLLSSGNQGGED 180

Query: 181 ----GGGAET-ELAVNEGE--------NQKELEESEDLFGGCEVFYKG-SWSCSANGEMI 240
               GGG ET +L VN  E         ++ELEES D F GCE  YKG SW+ S NGE +
Sbjct: 181 GGSRGGGGETDQLGVNGDEEIIEKVKAGREELEESGDFFDGCEGLYKGLSWNGSENGERV 240

Query: 241 DEVEDDSYQQLLNLQGEDYIQLESFIDYFLI 257
           DE+EDDSYQQLLNL+GEDYIQLESFIDYFLI
Sbjct: 241 DEIEDDSYQQLLNLEGEDYIQLESFIDYFLI 263

[Close]

BLAST of Lcy02g012770.1 vs. NCBI nr
Match: XP_022158366.1 (transcription factor MYB8-like [Momordica charantia])

HSP 1 Score: 423.7 bits (1088), Expect = 1.1e-114
Identity = 214/260 (82.31%), Postives = 230/260 (88.46%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRTSSCCS GGLHKGPWTAREDALLVNYIQ+HGEGHWR+LPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGRTSSCCSNGGLHKGPWTAREDALLVNYIQQHGEGHWRSLPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAV- 120
           YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAV 
Sbjct: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVT 120

Query: 121 ATEKA-GELKKEKIIITSNSENGETSNSRKPTQVSPFCNDDNSCGGVASGVPLLSGNP-- 180
           ATE    + +KE+I I SNSENGE+S + KPT+VS FC++DNS  GVAS +PL SGNP  
Sbjct: 121 ATENTRNQARKERITIPSNSENGESSKTTKPTRVSSFCDEDNSSSGVASALPLSSGNPGG 180

Query: 181 GGDGGGAETELAVNEGENQKELEESEDLFGGCEVFYKGSWSCSANGEMIDEVEDDSYQQL 240
           GG GGGAE ELA  +GE +K   ES DLFGGCE+ Y GSW+CSANGEMIDEVEDDSYQQL
Sbjct: 181 GGGGGGAEIELAA-KGEEEK--IESGDLFGGCEILYGGSWNCSANGEMIDEVEDDSYQQL 240

Query: 241 LNLQGEDYIQLESFIDYFLI 257
            NLQGEDYIQL+SFIDYFLI
Sbjct: 241 FNLQGEDYIQLDSFIDYFLI 257

[Close]

BLAST of Lcy02g012770.1 vs. NCBI nr
Match: XP_022928836.1 (transcription factor WER-like [Cucurbita moschata])

HSP 1 Score: 416.8 bits (1070), Expect = 1.4e-112
Identity = 209/262 (79.77%), Postives = 229/262 (87.40%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRTSSCCSKGGLHKGPWTAREDALLV+YIQ+HGEGHWRALPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVA 120
           YLRPDIKRGNIT DEDDLIIKLH+LLGNRWSLIAGRLPGRTDNEIKNYWNSHLSK+LA+ 
Sbjct: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLAIT 120

Query: 121 TEKAGELKKEKIIITSNSENGETSNSRKPTQVSPFCNDDNSCGGVASGVPLLSGNPGGDG 180
            + AGE KKEK +IT+NS NGETS+SRKP +VS   N DNS  G+ASG+P LSGN G  G
Sbjct: 121 KDNAGEAKKEK-VITTNSANGETSDSRKPARVS---NGDNSSTGMASGLPFLSGNQG--G 180

Query: 181 GGAETELAVNEG------ENQKELEESEDLFGGCEVFYKGSWSCSANGEMIDEVEDDSYQ 240
           GG    LAVN G      + ++E+EES DLFGGCEVFY+GSW+CS NGE I+EVEDDSYQ
Sbjct: 181 GGETDRLAVNGGGEIEKLKGREEMEESGDLFGGCEVFYEGSWNCSENGERIEEVEDDSYQ 240

Query: 241 QLLNLQGEDYIQLESFIDYFLI 257
           QLL+LQGEDYIQLESFIDYFLI
Sbjct: 241 QLLSLQGEDYIQLESFIDYFLI 256

[Close]

BLAST of Lcy02g012770.1 vs. NCBI nr
Match: KAG6579576.1 (Transcription repressor MYB5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 416.0 bits (1068), Expect = 2.3e-112
Identity = 208/262 (79.39%), Postives = 228/262 (87.02%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRTSSCCSKGGLHKGPWTAREDALLV+YIQ+HGEGHWRALPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVA 120
           YLRPDIKRGNIT DEDDLIIKLH+LLGNRWSLIAGRLPGRTDNEIKNYWNSHLSK+LA+ 
Sbjct: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLAIT 120

Query: 121 TEKAGELKKEKIIITSNSENGETSNSRKPTQVSPFCNDDNSCGGVASGVPLLSGNPGGDG 180
            + AGE KKEK +IT+NS NGETS+ RKP +VS   N DNS  G+ASG+P LSGN G  G
Sbjct: 121 KDNAGEAKKEK-VITTNSANGETSDGRKPARVS---NGDNSSSGMASGLPFLSGNQG--G 180

Query: 181 GGAETELAVNEG------ENQKELEESEDLFGGCEVFYKGSWSCSANGEMIDEVEDDSYQ 240
           GG    LAVN G      + ++E+EES DLFGGCEVFY+GSW+CS NGE I+EVEDDSYQ
Sbjct: 181 GGETDRLAVNGGGEIEKLKGREEMEESGDLFGGCEVFYEGSWNCSENGERIEEVEDDSYQ 240

Query: 241 QLLNLQGEDYIQLESFIDYFLI 257
           QLL+LQGEDYIQLESFIDYFLI
Sbjct: 241 QLLSLQGEDYIQLESFIDYFLI 256

[Close]

BLAST of Lcy02g012770.1 vs. NCBI nr
Match: XP_038874421.1 (transcription factor MYB8-like [Benincasa hispida])

HSP 1 Score: 416.0 bits (1068), Expect = 2.3e-112
Identity = 210/266 (78.95%), Postives = 224/266 (84.21%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRTSSCCSKGGLHKGPWTAREDALLVNYIQ++GEGHWRALPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQQNGEGHWRALPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVA 120
           YLRPDIKRGNIT DEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKR+A+ 
Sbjct: 61  YLRPDIKRGNITTDEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRVAIT 120

Query: 121 TEKAGELKKEKIIITSNSENGETSNSRKPTQVSPFCNDDNSCGGVASGVPLLSGNPGGD- 180
            + AGE KKE III    ENGETSN+RKP  + PFCN+DNS  G+AS +PL SGN GGD 
Sbjct: 121 KDNAGETKKENIII----ENGETSNTRKPIGILPFCNEDNSSNGMASRLPLSSGNQGGDN 180

Query: 181 --GGGAETELAVNEGE------NQKELEESEDLFGGCEVFYKG-SWSCSANGEMIDEVED 240
             GGG   +LAVN  E        +ELEES DLFGGCE  YK  SW+CS NGE IDE+ED
Sbjct: 181 GGGGGGTDQLAVNGDEEIQKVKGMEELEESGDLFGGCEGMYKELSWNCSENGERIDEIED 240

Query: 241 DSYQQLLNLQGEDYIQLESFIDYFLI 257
           DSYQQLLNL GEDYIQLESFIDYFLI
Sbjct: 241 DSYQQLLNLHGEDYIQLESFIDYFLI 262

[Close]

BLAST of Lcy02g012770.1 vs. NCBI nr
Match: XP_022969770.1 (transcription factor MYB8-like [Cucurbita maxima])

HSP 1 Score: 412.1 bits (1058), Expect = 3.4e-111
Identity = 207/262 (79.01%), Postives = 228/262 (87.02%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGRTSSCCSKGGLHKGPWTAREDALLV+YIQ+HGEGHWRALPKKAGLLRCGKSCRLRWMN
Sbjct: 1   MGRTSSCCSKGGLHKGPWTAREDALLVSYIQQHGEGHWRALPKKAGLLRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVA 120
           YLRPDIKRGNIT DEDDLIIKLH+LLGNRWSLIAGRLPGRTDNEIKNYWNSHLSK+LA+ 
Sbjct: 61  YLRPDIKRGNITPDEDDLIIKLHTLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLAIT 120

Query: 121 TEKAGELKKEKIIITSNSENGETSNSRKPTQVSPFCNDDNSCGGVASGVPLLSGNPGGDG 180
            + AGE K++  IIT+NS NGETS+SRKP +VS   N DNS  G+ASG+P LSGN G  G
Sbjct: 121 KDNAGEAKEK--IITTNSPNGETSDSRKPARVS---NGDNSGSGMASGLPFLSGNQG--G 180

Query: 181 GGAETELAVNEG------ENQKELEESEDLFGGCEVFYKGSWSCSANGEMIDEVEDDSYQ 240
           GG    LAVN G      + ++E+EES DLFGGCEVFY+GSW+CS NGE I+EVEDDSYQ
Sbjct: 181 GGETDRLAVNGGGEIEKLKGREEMEESGDLFGGCEVFYEGSWNCSENGERIEEVEDDSYQ 240

Query: 241 QLLNLQGEDYIQLESFIDYFLI 257
           QLL+LQGEDYIQLESFIDYFLI
Sbjct: 241 QLLSLQGEDYIQLESFIDYFLI 255

[Close]

BLAST of Lcy02g012770.1 vs. TAIR 10
Match: AT3G13540.1 (myb domain protein 5 )

HSP 1 Score: 202.2 bits (513), Expect = 5.0e-52
Identity = 83/115 (72.17%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 3   RTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMNYL 62
           +T+ CC+K G+ +GPWT  ED +LV++I++ GEG WR+LPK+AGLLRCGKSCRLRWMNYL
Sbjct: 13  KTTPCCTKMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYL 72

Query: 63  RPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRL 118
           RP +KRG IT+DE+DLI++LH LLGNRWSLIAGR+PGRTDNEIKNYWN+HL K+L
Sbjct: 73  RPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKL 127

[Close]

BLAST of Lcy02g012770.1 vs. TAIR 10
Match: AT1G22640.1 (myb domain protein 3 )

HSP 1 Score: 200.3 bits (508), Expect = 1.9e-51
Identity = 87/117 (74.36%), Postives = 102/117 (87.18%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR S CC K  ++KG WT  ED LLV+YI++HGEG WR+LP+ AGL RCGKSCRLRWMN
Sbjct: 1   MGR-SPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRL 118
           YLRPD+KRGN T +ED+LIIKLHSLLGN+WSLIAGRLPGRTDNEIKNYWN+H+ ++L
Sbjct: 61  YLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of Lcy02g012770.1 vs. TAIR 10
Match: AT5G49330.1 (myb domain protein 111 )

HSP 1 Score: 199.1 bits (505), Expect = 4.2e-51
Identity = 94/152 (61.84%), Postives = 116/152 (76.32%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR + CC K GL +G WTA ED +L  YIQ +GEG WR+LPKKAGLLRCGKSCRLRW+N
Sbjct: 1   MGR-APCCEKIGLKRGRWTAEEDEILTKYIQTNGEGSWRSLPKKAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVA 120
           YLR D+KRGNIT+DE+++I+KLHSLLGNRWSLIA  LPGRTDNEIKNYWNSHLS+++   
Sbjct: 61  YLRRDLKRGNITSDEEEIIVKLHSLLGNRWSLIATHLPGRTDNEIKNYWNSHLSRKIYAF 120

Query: 121 TEKAGE----LKKEKIIITSNSENGETSNSRK 149
           T  +G+    L  + ++  S S +    N+ K
Sbjct: 121 TAVSGDGHNLLVNDVVLKKSCSSSSGAKNNNK 151

[Close]

BLAST of Lcy02g012770.1 vs. TAIR 10
Match: AT4G09460.1 (myb domain protein 6 )

HSP 1 Score: 198.4 bits (503), Expect = 7.2e-51
Identity = 87/117 (74.36%), Postives = 99/117 (84.62%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR S CC K   +KG WT  ED  LV+YI+ HGEG WR+LPK AGLLRCGKSCRLRW+N
Sbjct: 1   MGR-SPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRL 118
           YLRPD+KRGN T DED +IIKLHSLLGN+WSLIAGRLPGRTDNEIKNYWN+H+ ++L
Sbjct: 61  YLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of Lcy02g012770.1 vs. TAIR 10
Match: AT4G38620.1 (myb domain protein 4 )

HSP 1 Score: 196.4 bits (498), Expect = 2.7e-50
Identity = 98/156 (62.82%), Postives = 114/156 (73.08%), Query Frame = 0


Query: 1   MGRTSSCCSKGGLHKGPWTAREDALLVNYIQEHGEGHWRALPKKAGLLRCGKSCRLRWMN 60
           MGR S CC K   +KG WT  ED  LV YI+ HGEG WR+LPK AGLLRCGKSCRLRW+N
Sbjct: 1   MGR-SPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGNITADEDDLIIKLHSLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRLAVA 120
           YLRPD+KRGN T +ED+LIIKLHSLLGN+WSLIAGRLPGRTDNEIKNYWN+H+ ++L   
Sbjct: 61  YLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLI-- 120

Query: 121 TEKAGELKKEKIIITSNSENGETSNSR--KPTQVSP 155
                      I  TS+    E+S S+  KPTQ+ P
Sbjct: 121 --------NRGIDPTSHRPIQESSASQDSKPTQLEP 145

The following BLAST results are available for this feature:

BLAST of Lcy02g012770.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38850	7.0e-51	72.17	Transcription repressor MYB5 OS=Arabidopsis thaliana OX=3702 GN=MYB5 PE=1 SV=1	[more]
Q9S9K9	2.7e-50	74.36	Transcription factor MYB3 OS=Arabidopsis thaliana OX=3702 GN=MYB3 PE=1 SV=1	[more]
P27898	3.5e-50	75.21	Myb-related protein P OS=Zea mays OX=4577 GN=P PE=2 SV=1	[more]
Q9FJ07	5.9e-50	61.84	Transcription factor MYB111 OS=Arabidopsis thaliana OX=3702 GN=MYB111 PE=1 SV=1	[more]
Q38851	1.0e-49	74.36	Transcription repressor MYB6 OS=Arabidopsis thaliana OX=3702 GN=MYB6 PE=1 SV=1	[more]

BLAST of Lcy02g012770.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0Q2	5.5e-115	82.31	transcription factor MYB8-like OS=Momordica charantia OX=3673 GN=LOC111024867 PE...	[more]
A0A6J1ELE7	6.7e-113	79.77	transcription factor WER-like OS=Cucurbita moschata OX=3662 GN=LOC111435631 PE=4...	[more]
A0A6J1I0W3	1.6e-111	79.01	transcription factor MYB8-like OS=Cucurbita maxima OX=3661 GN=LOC111468870 PE=4 ...	[more]
A0A5A7TGY6	4.5e-109	76.38	Transcription factor WER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3AU00	2.9e-108	76.01	transcription factor WER-like OS=Cucumis melo OX=3656 GN=LOC103482846 PE=4 SV=1	[more]

BLAST of Lcy02g012770.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158366.1	1.1e-114	82.31	transcription factor MYB8-like [Momordica charantia]	[more]
XP_022928836.1	1.4e-112	79.77	transcription factor WER-like [Cucurbita moschata]	[more]
KAG6579576.1	2.3e-112	79.39	Transcription repressor MYB5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038874421.1	2.3e-112	78.95	transcription factor MYB8-like [Benincasa hispida]	[more]
XP_022969770.1	3.4e-111	79.01	transcription factor MYB8-like [Cucurbita maxima]	[more]

BLAST of Lcy02g012770.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13540.1	5.0e-52	72.17	myb domain protein 5	[more]
AT1G22640.1	1.9e-51	74.36	myb domain protein 3	[more]
AT5G49330.1	4.2e-51	61.84	myb domain protein 111	[more]
AT4G09460.1	7.2e-51	74.36	myb domain protein 6	[more]
AT4G38620.1	2.7e-50	62.82	myb domain protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 110..130
None	No IPR available	GENE3D	1.10.10.60		coord: 72..149 e-value: 3.1E-21 score: 77.2
None	No IPR available	GENE3D	1.10.10.60		coord: 15..67 e-value: 4.0E-19 score: 70.3
None	No IPR available	PANTHER	PTHR47998	TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1	coord: 1..160
None	No IPR available	PANTHER	PTHR47998:SF32	MYB-RELATED PROTEIN 308-LIKE	coord: 1..160
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 67..115 e-value: 6.3E-16 score: 68.9 coord: 14..64 e-value: 3.0E-13 score: 60.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 63..113 score: 10.51063
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 10..62 score: 10.882227
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 72..113 e-value: 1.60801E-11 score: 56.0446
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 17..62 e-value: 9.68527E-11 score: 53.7334
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 68..113 e-value: 6.0E-14 score: 52.0 coord: 15..62 e-value: 9.8E-14 score: 51.3
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 63..117 score: 26.457317
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 10..62 score: 16.601435
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 12..109

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy02g012770	Lcy02g012770	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy02g012770.1.utr5p1	Lcy02g012770.1.utr5p1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy02g012770.1.exon1	Lcy02g012770.1.exon1	exon
Lcy02g012770.1.exon2	Lcy02g012770.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy02g012770.1.cds1	Lcy02g012770.1.cds1	CDS
Lcy02g012770.1.cds2	Lcy02g012770.1.cds2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy02g012770.1.utr3p1	Lcy02g012770.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy02g012770.1	Lcy02g012770.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding