Lcy02g006270.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy02g006270.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ankyrin repeat family protein, putative
Location	Chr02: 8134188 .. 8136786 (-)
Sequence length	552
RNA-Seq Expression	Lcy02g006270.1
Synteny	Lcy02g006270.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCAAGGCTTATGAATGCAGTGAGACAGAACGACGTTGAGAGCTTCATGAATCTCATCGGCGAGGACGCCGCCGGAATAATTCTGAAGCAGAGATCGGAAGCCGGGAACACGGTGCTGCATGAGGCGGCGAGGCACGGCCACGTGAAGTTGGTGAAGGAGATAGTAAAGCGGTGGCCGGAATCTCCGGCGGAGAAGAATCTGAAGCTGGAGACTCCATTTCATGAAGCTTGTGCTCATGGGCATGCTGATATCTTGTTGTTTCTTCTGGAGACTGATCCATGGGCCAGTTTCGGACTCAGCCATGAAAATCAGAGCCTGTTGTTTGTGGCCTGTAGCCGAGGCCATGTCGACGTTGTTAAGATCCTCGCCAAGCAGCCATGGTTGCAGAATTTAAATGACCACGACCAAGGATTGGATCCATCTTGTTTTCTTGAGGCTGCGTCAAGAGGACACCTAGGTTTGTATCCTCCAAATAATTATGCCCCGTTTCATCATTTTTTGGTTTTTTGTTTTTAGCATTTGAAAATTAAATTTATAAACACCGCTCCTGCCTAAGTTTTTTTCGGTTAAGTTTTGAAAAATTAAGGCTCCGTTTGATAACCATTTGATTTTTTGTTTTTAGTTTTTGAAAATTAAGCTTATAAACACTACTTCTCTCACGACTTTCTTTGTTTTGTTATCTACAACCTTTCCATGTTTTCAAAAACCAAGTTGAATTTTGAAAACAAAAAAAAAACGTAGTTTTCAAAAACTTGTTTTTGGAATTTGGAATTTGGCTAAAAATTCAAGTGTCTACTTAACAAAAATGAAAATCATGATAAGGAAATTGAGAGATAACAAACATAATTTTCAAAAACCAAAAACTAAAAACCAAATGGTTATCAAACGGAGCCTAAAAAATGAAGTTTTTAAAAACTTGATTTTATTTTAGAATTTGGCTAAGAATTCAAATATTTCCTTACAAAAATGAAACCTAAAGAAATTGAGGAAACCAACACAATTTTCAAAACAAAAAACAAAATGATTTCAATGGACCTTGGTAATTTTTGAGAAAAGTTTTGGAATAATTCAGTCATTTGTTTAGAAAGTTTCAATTTCTTATGTTGAATGATAGGTAGGTTATGTTACTCTGTAAAGTTAGCAGACTTTGAGAGGAAAGAAATTAGATTACCTAAGAAACAGAAGGTCAAACTTTTTGCCAATTACTTAGCTAGAAATATCGTGGGATTAAAATTTGTCCATCGTTAGCTAGACTAGGACTAATTCTTAATCTAATTTTTTTTTCAACATACTAAATATTATAACTAACAAATTTTAATATAGAAAGCATATAATTAAAAAAAAAATGGATTTACTAACTTAGGCCCCGTTTGATAACCATTTGGTTTTTGGTTTTTGGTTTTTGAAAATTAAGCTTATAAACACCTATTCCTACCTATGAGTTTGTTTGTTTTAGTATCTACTTTCTTCCTTGTTTTCAAAAACCAAGTCAAATTTTAAAAACAAAAAAAAGTAGTTTCCAAAAACTTGTTTTTGTTTTTGAAATTTGGCAAGAAATTCAAATGGCTTCTTAATAAAGATGAAAACCATGATAGAGAATTTGGGAGAAAACAAGCATAATTTTCAAAAACCAAAAACCAAAAACCAAATTGTTATCAAACGGGGCCTTAGTGGTAATTGACATGTAACCTCGACCATGAGGTCAGAGGTTCGAATCCCTCCACCCCAAATATTGATGTCCTCAAAAAAAATGAAAAAAAAAATAGAGGGGAAAACGTATATTTAGTCCAAAATTATTCGGTAAGAAAAAAAAAAAAAAAATTAAAAAGTTAGATTGGTTTTAAAATACTTTTTTAAGAAACATTAGTATTTGGGATGCCTTTTGAAAAAAAAAATACTTTTAGATAAGAGCACTTCTTCCCTCAACGCTACCAAAAGAAACATGAATTAATGTGTCAAAGTGAACATATCTCAACAGTAATTGGCGTGTATCCTCGATCAAGAGGTCAAAGATTCGAATCTTCCACCCCAAAATGTTAATGTATTAAAAGAAAAACATGAATTAATATTTCTCATCAAACCATTTTAAGTGACATTTTTTAACTATATATATTTTGAAACTTTTAATTATAGTATTTTTGTCAGTAGACATTAAATCTGGGTATAATGATAAATTTATTAGTGATATTTAGTGATTTGATAAAAATTTAGAGGAGAAGTTACGTCAAATAGTTAGAGAAAAAAGCCAAATTTTCCTTTAAATCTCTACCGTCTCGCTAACTATATATCATACCATATAAGCATATTATTAGGTAATTAAACATGAGGTTTATCTGAAAATCAATTGACAATGAGGTGAATTAGTCCATGTATCTTACAAAGAAGGTGAGGTAACTGCATCCAACAAAGAGGAGAGAAAAAAAAATGTAATAATGTAATAGTTTCAAACACTAAATCAAACAAATAATGCCAGAATAGACTCATTATTTTGAAGATTGGTGCAGGCGTGGTTGAAGAACTATTAGACAACTTCCCAGAAGTGGGTTTGAAGGTTGATAAGAATGGATTTTCTGGTTTGCACAAGGCTTGTTGA

mRNA sequence

ATGGATCCAAGGCTTATGAATGCAGTGAGACAGAACGACGTTGAGAGCTTCATGAATCTCATCGGCGAGGACGCCGCCGGAATAATTCTGAAGCAGAGATCGGAAGCCGGGAACACGGTGCTGCATGAGGCGGCGAGGCACGGCCACGTGAAGTTGGTGAAGGAGATAGTAAAGCGGTGGCCGGAATCTCCGGCGGAGAAGAATCTGAAGCTGGAGACTCCATTTCATGAAGCTTGTGCTCATGGGCATGCTGATATCTTGTTGTTTCTTCTGGAGACTGATCCATGGGCCAGTTTCGGACTCAGCCATGAAAATCAGAGCCTGTTGTTTGTGGCCTGTAGCCGAGGCCATGTCGACGTTGTTAAGATCCTCGCCAAGCAGCCATGGTTGCAGAATTTAAATGACCACGACCAAGGATTGGATCCATCTTGTTTTCTTGAGGCTGCGTCAAGAGGACACCTAGGCGTGGTTGAAGAACTATTAGACAACTTCCCAGAAGTGGGTTTGAAGGTTGATAAGAATGGATTTTCTGGTTTGCACAAGGCTTGTTGA

Coding sequence (CDS)

ATGGATCCAAGGCTTATGAATGCAGTGAGACAGAACGACGTTGAGAGCTTCATGAATCTCATCGGCGAGGACGCCGCCGGAATAATTCTGAAGCAGAGATCGGAAGCCGGGAACACGGTGCTGCATGAGGCGGCGAGGCACGGCCACGTGAAGTTGGTGAAGGAGATAGTAAAGCGGTGGCCGGAATCTCCGGCGGAGAAGAATCTGAAGCTGGAGACTCCATTTCATGAAGCTTGTGCTCATGGGCATGCTGATATCTTGTTGTTTCTTCTGGAGACTGATCCATGGGCCAGTTTCGGACTCAGCCATGAAAATCAGAGCCTGTTGTTTGTGGCCTGTAGCCGAGGCCATGTCGACGTTGTTAAGATCCTCGCCAAGCAGCCATGGTTGCAGAATTTAAATGACCACGACCAAGGATTGGATCCATCTTGTTTTCTTGAGGCTGCGTCAAGAGGACACCTAGGCGTGGTTGAAGAACTATTAGACAACTTCCCAGAAGTGGGTTTGAAGGTTGATAAGAATGGATTTTCTGGTTTGCACAAGGCTTGTTGA

Protein sequence

MDPRLMNAVRQNDVESFMNLIGEDAAGIILKQRSEAGNTVLHEAARHGHVKLVKEIVKRWPESPAEKNLKLETPFHEACAHGHADILLFLLETDPWASFGLSHENQSLLFVACSRGHVDVVKILAKQPWLQNLNDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSGLHKAC

Homology

[Close]

BLAST of Lcy02g006270.1 vs. ExPASy Swiss-Prot
Match: Q9C7A2 (Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana OX=3702 GN=ITN1 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-15
Identity = 57/169 (33.73%), Postives = 84/169 (49.70%), Query Frame = 0


Query: 15  ESFMNLIGEDAAGIILKQRSEAGNTVLHEAARHGHVKLVKEIVK-RWPESPAEKNLKLET 74
           E F   + E  A I+  + +E G T L  AA  GH+ +VKE++K    ES A+KN     
Sbjct: 108 EEFDAEVAEIRASIV-NEVNELGETALFTAADKGHLDVVKELLKYSSRESIAKKNRSGYD 167

Query: 75  PFHEACAHGHADILLFLLETDPWASFGLSHENQSLLFVACSRGHVDVVKILAKQPWLQNL 134
           P H A   GH  I+  LL+ D   S      N + L  A  RGH +VV  L  +    NL
Sbjct: 168 PLHIAAIQGHHAIVEVLLDHDATLSQTFGPSNATPLVSAAMRGHTEVVNQLLSK--AGNL 227

Query: 135 NDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSGLHKA 183
            +  +  + +    AA +GH+ V++ LL   P++  ++DK G + LH A
Sbjct: 228 LEISRSNNKNALHLAARQGHVEVIKALLSKDPQLARRIDKKGQTALHMA 273

[Close]

BLAST of Lcy02g006270.1 vs. ExPASy Swiss-Prot
Match: A2CIR5 (Ankyrin repeat-containing protein NPR4 OS=Oryza sativa subsp. japonica OX=39947 GN=NPR4 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.3e-11
Identity = 56/170 (32.94%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 23  EDAAGIILKQRSEAGNTVLHEAARHGHVKLVKEIVKRW-PESPAEKNLKLETPFHEACAH 82
           E+    +  + +EAG T L  AA  GH+++V+E+++    E  A KN       H A   
Sbjct: 106 EEVRRAVAAEPNEAGETPLVAAAERGHLEVVRELLRHLDAEGVAAKNRSGYDALHVAARE 165

Query: 83  G-HADILLFLLETDPWA-SFGLSHENQSLLFVACSRGHVDVVKILAKQPWLQNLND---- 142
           G HA +   LL     A +FG +  N S L  A +RGH +VVK+L +      L+D    
Sbjct: 166 GRHAVVQEMLLHNRLLAKTFGPA--NTSPLISAATRGHTEVVKLLLE------LDDFGLV 225

Query: 143 ---HDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSGLHKA 183
               D G +   F  AA +GH+ +V+ LL+  P++  + DK G + LH A
Sbjct: 226 EMAKDNGKNSLHF--AARQGHVEIVKALLEKDPQLARRNDKKGQTALHMA 265

[Close]

BLAST of Lcy02g006270.1 vs. ExPASy Swiss-Prot
Match: P16157 (Ankyrin-1 OS=Homo sapiens OX=9606 GN=ANK1 PE=1 SV=3)

HSP 1 Score: 69.7 bits (169), Expect = 3.9e-11
Identity = 49/149 (32.89%), Postives = 76/149 (51.01%), Query Frame = 0


Query: 34  SEAGNTVLHEAARHGHVKLVKEIVKRWPESPAEKNLKLETPFHEACAHGHADILLFLLET 93
           +E+G T LH A+  GH+ +VK +++R   SP   N+K+ETP H A   GH ++  +LL+ 
Sbjct: 401 TESGLTPLHVASFMGHLPIVKNLLQR-GASPNVSNVKVETPLHMAARAGHTEVAKYLLQN 460

Query: 94  DPWASFGLSHENQSLLFVACSRGHVDVVKILAKQPWLQNLNDHDQGLDPSCFLEAASRGH 153
               +   + ++Q+ L  A   GH ++VK+L +     NL     G  P     AA  GH
Sbjct: 461 KAKVN-AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLAT-TAGHTPLHI--AAREGH 520

Query: 154 LGVVEELLDNFPEVGLKVDKNGFSGLHKA 183
           +  V  LL+        + K GF+ LH A
Sbjct: 521 VETVLALLEKEASQAC-MTKKGFTPLHVA 543

[Close]

BLAST of Lcy02g006270.1 vs. ExPASy Swiss-Prot
Match: Q02357 (Ankyrin-1 OS=Mus musculus OX=10090 GN=Ank1 PE=1 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 3.9e-11
Identity = 49/149 (32.89%), Postives = 75/149 (50.34%), Query Frame = 0


Query: 34  SEAGNTVLHEAARHGHVKLVKEIVKRWPESPAEKNLKLETPFHEACAHGHADILLFLLET 93
           +E+G T LH A+  GH+ +VK +++R   SP   N+K+ETP H A   GH ++  +LL+ 
Sbjct: 397 TESGLTPLHVASFMGHLPIVKNLLQR-GASPNVSNVKVETPLHMAARAGHTEVAKYLLQN 456

Query: 94  DPWASFGLSHENQSLLFVACSRGHVDVVKILAKQPWLQNLNDHDQGLDPSCFLEAASRGH 153
              A+   + ++Q+ L  A   GH  +VK+L +     NL     G  P     AA  GH
Sbjct: 457 KAKAN-AKAKDDQTPLHCAARIGHTGMVKLLLENGASPNLAT-TAGHTP--LHTAAREGH 516

Query: 154 LGVVEELLDNFPEVGLKVDKNGFSGLHKA 183
           +     LL+        + K GF+ LH A
Sbjct: 517 VDTALALLEKEASQAC-MTKKGFTPLHVA 539

[Close]

BLAST of Lcy02g006270.1 vs. ExPASy Swiss-Prot
Match: Q9VCA8 (Ankyrin repeat and KH domain-containing protein mask OS=Drosophila melanogaster OX=7227 GN=mask PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-10
Identity = 56/185 (30.27%), Postives = 86/185 (46.49%), Query Frame = 0


Query: 5   LMNAVRQNDVESFMNLIGEDAAGI-ILKQRSEAGNTVLHEAARHGHVKLVKEIVKRWPES 64
           L+ A   NDV +   L+ +    +      ++ G ++L  A   G+ +L + ++      
Sbjct: 552 LVAACTDNDVNTVKRLLCKGNVNLNDAAASTDDGESLLSMACSAGYYELAQVLLAMSAAQ 611

Query: 65  PAEKNLKLETPFHEACAHGHADILLFLLETDPWASFGLSHENQSLLFVACSRGHVDVVKI 124
             +K  K  TP  EA + GH DI+  LL  +   +   +  N  L+F AC+ G VDVVK+
Sbjct: 612 VEDKGQKDSTPLMEAASAGHLDIVKLLLNHNADVNAHCATGNTPLMF-ACAGGQVDVVKV 671

Query: 125 LAK---QPWLQNLNDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGF--SG 184
           L K       QN N H      +  +EAAS GH+ V + LL++    G+    N F  S 
Sbjct: 672 LLKHGANVEEQNENGH------TPLMEAASAGHVEVAKVLLEH--GAGINTHSNEFKESA 727

[Close]

BLAST of Lcy02g006270.1 vs. ExPASy TrEMBL
Match: A0A6J1DH91 (ankyrin repeat-containing protein At2g01680-like OS=Momordica charantia OX=3673 GN=LOC111021072 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.3e-54
Identity = 112/185 (60.54%), Postives = 138/185 (74.59%), Query Frame = 0


Query: 1   MDPRLMNAVRQNDVESFMNLIGEDAAGIILKQRSE-AGNTVLHEAARHGHVKLVKEIVKR 60
           MDPRL  AVR  D+ SFMN++G++    ILKQ+SE  G+T LH A R+G   +VK+I+K 
Sbjct: 1   MDPRLFEAVRWKDMRSFMNVVGKNVE--ILKQKSEVTGDTALHLAVRNGRGFMVKKILKL 60

Query: 61  WPESPAEKNLKLETPFHEACAHGHADILLFLLETDPWASFGLSHENQSLLFVACSRGHVD 120
           WPE+ AE+NLK ETPFHEAC  G A+IL+ LLE +P  S  L H++ SL+F ACS GH+D
Sbjct: 61  WPEAAAEENLKKETPFHEACKEGEAEILMLLLEMNPRLSSELGHQSHSLMFSACSHGHLD 120

Query: 121 VVKILAKQPWLQNLNDHDQGLDP-SCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSG 180
           VVKIL KQPWL+N       LDP +CFLEAAS+GHLGVV+E+L  FP+V  KVD NGFSG
Sbjct: 121 VVKILFKQPWLRN-------LDPAACFLEAASKGHLGVVKEILGKFPKVARKVDDNGFSG 176

Query: 181 LHKAC 184
           LHKAC
Sbjct: 181 LHKAC 176

[Close]

BLAST of Lcy02g006270.1 vs. ExPASy TrEMBL
Match: A0A6J1DJ89 (ankyrin repeat-containing protein At2g01680-like OS=Momordica charantia OX=3673 GN=LOC111021033 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.7e-52
Identity = 109/185 (58.92%), Postives = 130/185 (70.27%), Query Frame = 0


Query: 1   MDPRLMNAVRQNDVESFMNLIGEDAAGIILKQRS-EAGNTVLHEAARHGHVKLVKEIVKR 60
           MDPRL  AV+ ND   F NL+ E+    ILKQRS E GNT LH A RHG V  VKEI++ 
Sbjct: 1   MDPRLFQAVKWNDRRRFRNLVDENWE--ILKQRSEETGNTALHLAVRHGRVDFVKEILRL 60

Query: 61  WPESPAEKNLKLETPFHEACAHG-HADILLFLLETDPWASFGLSHENQSLLFVACSRGHV 120
           WPE+ A +NLK ETPF +AC  G   +IL+ LLE +PW    LSH NQSLLFVACS G V
Sbjct: 61  WPEAAAVENLKNETPFRKACKEGSEPEILMLLLEMEPWVRSELSHRNQSLLFVACSHGQV 120

Query: 121 DVVKILAKQPWLQNLNDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSG 180
           D VKIL K PWL +L+DH      +CFLEAAS+G+LG+V+E+L  FP+V  KVD NG+ G
Sbjct: 121 DAVKILLKHPWLHSLDDH-----AACFLEAASQGYLGLVKEILGKFPKVAEKVDDNGYCG 178

Query: 181 LHKAC 184
           LHKAC
Sbjct: 181 LHKAC 178

[Close]

BLAST of Lcy02g006270.1 vs. ExPASy TrEMBL
Match: A0A6J1DL07 (ankyrin repeat-containing protein At2g01680-like OS=Momordica charantia OX=3673 GN=LOC111021037 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.4e-51
Identity = 111/185 (60.00%), Postives = 131/185 (70.81%), Query Frame = 0


Query: 1   MDPRLMNAVRQNDVESFMNLIGEDAAGIILKQRS-EAGNTVLHEAARHGHVKLVKEIVKR 60
           MDPRL  AV  ND + FMNL+ E+  G ILK+ S E G+TVLH AARHG V  VK+I++ 
Sbjct: 1   MDPRLFQAVTWNDRKRFMNLVDEN--GEILKEISEETGDTVLHLAARHGRVDFVKDILRL 60

Query: 61  WPESPAEKNLKLETPFHEACAHG-HADILLFLLETDPWASFGLSHENQSLLFVACSRGHV 120
           WPE+ A +NLK ETPF EAC  G   +IL+ LLE +PW    LSH+ QSLL VACSRG V
Sbjct: 61  WPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEPWVRSELSHQKQSLLLVACSRGQV 120

Query: 121 DVVKILAKQPWLQNLNDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSG 180
           D VKIL K PWL NL+DH      +CFLEAASRG+LGVV+E+L  FP+V  KVD  G  G
Sbjct: 121 DAVKILLKHPWLHNLDDH-----AACFLEAASRGYLGVVKEILGKFPKVAEKVDDIGGHG 178

Query: 181 LHKAC 184
           LHKAC
Sbjct: 181 LHKAC 178

[Close]

BLAST of Lcy02g006270.1 vs. ExPASy TrEMBL
Match: A0A6J1DL48 (ankyrin repeat-containing protein NPR4-like OS=Momordica charantia OX=3673 GN=LOC111021073 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.4e-50
Identity = 106/185 (57.30%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 1   MDPRLMNAVRQNDVESFMNLIGEDAAGIILKQRS-EAGNTVLHEAARHGHVKLVKEIVKR 60
           MD RL  AV+ ND   F NL+ E+    I+KQ S E G+T LH A RHGHV  V EI++ 
Sbjct: 1   MDTRLFQAVKWNDRRRFRNLVDENWE--IMKQISEETGDTALHSAVRHGHVNFVTEILRL 60

Query: 61  WPESPAEKNLKLETPFHEACAHG-HADILLFLLETDPWASFGLSHENQSLLFVACSRGHV 120
           WPE+ A +N K ETPF EAC  G   +IL+ LL  +PW    LSH+NQSLL  ACS G V
Sbjct: 61  WPEAAAVENRKNETPFQEACREGSEPEILMLLLAMEPWVRSELSHQNQSLLLAACSHGQV 120

Query: 121 DVVKILAKQPWLQNLNDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSG 180
           D VKIL KQPWL NL+DH      +CFLEAASRG+LG+V+E+L  FP+V  KVD NGF G
Sbjct: 121 DAVKILLKQPWLHNLDDH-----AACFLEAASRGYLGLVKEILGKFPKVAEKVDDNGFCG 178

Query: 181 LHKAC 184
           LHKAC
Sbjct: 181 LHKAC 178

[Close]

BLAST of Lcy02g006270.1 vs. ExPASy TrEMBL
Match: A0A7N2LNW6 (ANK_REP_REGION domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 4.1e-48
Identity = 101/184 (54.89%), Postives = 130/184 (70.65%), Query Frame = 0


Query: 1   MDPRLMNAVRQNDVESFMNLIGEDAAGIILKQRSEAG-NTVLHEAARHGHVKLVKEIVKR 60
           MDPRL+ A+ +ND  +F+NL+ E+     L+QR++   +TVLH A+R GHVKLV EI+K 
Sbjct: 1   MDPRLLEAIARNDKSTFINLVQENEN--FLEQRTDGSRSTVLHLASRFGHVKLVMEILKL 60

Query: 61  WPESPAEKNLKLETPFHEACAHGHADILLFLLETDPWASFGLSHENQSLLFVACSRGHVD 120
            P   AE N KLETP HEAC+ GH ++L  LLE +PWA+  L+ +NQS  F+ACS GHVD
Sbjct: 61  RPMVAAENN-KLETPLHEACSRGHTEVLKLLLEHNPWAACKLNADNQSAFFMACSHGHVD 120

Query: 121 VVKILAKQPWLQNLNDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSGL 180
           +VK+L  Q WL  L   D+G DP+C   AASRGH GVV ELL+ FP++  KVDKNG+S L
Sbjct: 121 LVKLLLNQSWLVGL--EDEGFDPTCLHVAASRGHTGVVRELLNVFPDLAWKVDKNGYSPL 179

Query: 181 HKAC 184
           H AC
Sbjct: 181 HHAC 179

[Close]

BLAST of Lcy02g006270.1 vs. NCBI nr
Match: XP_022153605.1 (ankyrin repeat-containing protein At2g01680-like [Momordica charantia])

HSP 1 Score: 221.9 bits (564), Expect = 4.6e-54
Identity = 112/185 (60.54%), Postives = 138/185 (74.59%), Query Frame = 0


Query: 1   MDPRLMNAVRQNDVESFMNLIGEDAAGIILKQRSE-AGNTVLHEAARHGHVKLVKEIVKR 60
           MDPRL  AVR  D+ SFMN++G++    ILKQ+SE  G+T LH A R+G   +VK+I+K 
Sbjct: 1   MDPRLFEAVRWKDMRSFMNVVGKNVE--ILKQKSEVTGDTALHLAVRNGRGFMVKKILKL 60

Query: 61  WPESPAEKNLKLETPFHEACAHGHADILLFLLETDPWASFGLSHENQSLLFVACSRGHVD 120
           WPE+ AE+NLK ETPFHEAC  G A+IL+ LLE +P  S  L H++ SL+F ACS GH+D
Sbjct: 61  WPEAAAEENLKKETPFHEACKEGEAEILMLLLEMNPRLSSELGHQSHSLMFSACSHGHLD 120

Query: 121 VVKILAKQPWLQNLNDHDQGLDP-SCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSG 180
           VVKIL KQPWL+N       LDP +CFLEAAS+GHLGVV+E+L  FP+V  KVD NGFSG
Sbjct: 121 VVKILFKQPWLRN-------LDPAACFLEAASKGHLGVVKEILGKFPKVARKVDDNGFSG 176

Query: 181 LHKAC 184
           LHKAC
Sbjct: 181 LHKAC 176

[Close]

BLAST of Lcy02g006270.1 vs. NCBI nr
Match: XP_022153557.1 (ankyrin repeat-containing protein At2g01680-like [Momordica charantia])

HSP 1 Score: 214.2 bits (544), Expect = 9.7e-52
Identity = 109/185 (58.92%), Postives = 130/185 (70.27%), Query Frame = 0


Query: 1   MDPRLMNAVRQNDVESFMNLIGEDAAGIILKQRS-EAGNTVLHEAARHGHVKLVKEIVKR 60
           MDPRL  AV+ ND   F NL+ E+    ILKQRS E GNT LH A RHG V  VKEI++ 
Sbjct: 1   MDPRLFQAVKWNDRRRFRNLVDENWE--ILKQRSEETGNTALHLAVRHGRVDFVKEILRL 60

Query: 61  WPESPAEKNLKLETPFHEACAHG-HADILLFLLETDPWASFGLSHENQSLLFVACSRGHV 120
           WPE+ A +NLK ETPF +AC  G   +IL+ LLE +PW    LSH NQSLLFVACS G V
Sbjct: 61  WPEAAAVENLKNETPFRKACKEGSEPEILMLLLEMEPWVRSELSHRNQSLLFVACSHGQV 120

Query: 121 DVVKILAKQPWLQNLNDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSG 180
           D VKIL K PWL +L+DH      +CFLEAAS+G+LG+V+E+L  FP+V  KVD NG+ G
Sbjct: 121 DAVKILLKHPWLHSLDDH-----AACFLEAASQGYLGLVKEILGKFPKVAEKVDDNGYCG 178

Query: 181 LHKAC 184
           LHKAC
Sbjct: 181 LHKAC 178

[Close]

BLAST of Lcy02g006270.1 vs. NCBI nr
Match: XP_022153566.1 (ankyrin repeat-containing protein At2g01680-like [Momordica charantia])

HSP 1 Score: 212.6 bits (540), Expect = 2.8e-51
Identity = 111/185 (60.00%), Postives = 131/185 (70.81%), Query Frame = 0


Query: 1   MDPRLMNAVRQNDVESFMNLIGEDAAGIILKQRS-EAGNTVLHEAARHGHVKLVKEIVKR 60
           MDPRL  AV  ND + FMNL+ E+  G ILK+ S E G+TVLH AARHG V  VK+I++ 
Sbjct: 1   MDPRLFQAVTWNDRKRFMNLVDEN--GEILKEISEETGDTVLHLAARHGRVDFVKDILRL 60

Query: 61  WPESPAEKNLKLETPFHEACAHG-HADILLFLLETDPWASFGLSHENQSLLFVACSRGHV 120
           WPE+ A +NLK ETPF EAC  G   +IL+ LLE +PW    LSH+ QSLL VACSRG V
Sbjct: 61  WPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEPWVRSELSHQKQSLLLVACSRGQV 120

Query: 121 DVVKILAKQPWLQNLNDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSG 180
           D VKIL K PWL NL+DH      +CFLEAASRG+LGVV+E+L  FP+V  KVD  G  G
Sbjct: 121 DAVKILLKHPWLHNLDDH-----AACFLEAASRGYLGVVKEILGKFPKVAEKVDDIGGHG 178

Query: 181 LHKAC 184
           LHKAC
Sbjct: 181 LHKAC 178

[Close]

BLAST of Lcy02g006270.1 vs. NCBI nr
Match: XP_022153606.1 (ankyrin repeat-containing protein NPR4-like [Momordica charantia])

HSP 1 Score: 208.0 bits (528), Expect = 6.9e-50
Identity = 106/185 (57.30%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 1   MDPRLMNAVRQNDVESFMNLIGEDAAGIILKQRS-EAGNTVLHEAARHGHVKLVKEIVKR 60
           MD RL  AV+ ND   F NL+ E+    I+KQ S E G+T LH A RHGHV  V EI++ 
Sbjct: 1   MDTRLFQAVKWNDRRRFRNLVDENWE--IMKQISEETGDTALHSAVRHGHVNFVTEILRL 60

Query: 61  WPESPAEKNLKLETPFHEACAHG-HADILLFLLETDPWASFGLSHENQSLLFVACSRGHV 120
           WPE+ A +N K ETPF EAC  G   +IL+ LL  +PW    LSH+NQSLL  ACS G V
Sbjct: 61  WPEAAAVENRKNETPFQEACREGSEPEILMLLLAMEPWVRSELSHQNQSLLLAACSHGQV 120

Query: 121 DVVKILAKQPWLQNLNDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSG 180
           D VKIL KQPWL NL+DH      +CFLEAASRG+LG+V+E+L  FP+V  KVD NGF G
Sbjct: 121 DAVKILLKQPWLHNLDDH-----AACFLEAASRGYLGLVKEILGKFPKVAEKVDDNGFCG 178

Query: 181 LHKAC 184
           LHKAC
Sbjct: 181 LHKAC 178

[Close]

BLAST of Lcy02g006270.1 vs. NCBI nr
Match: XP_030969858.1 (uncharacterized protein LOC115990141 [Quercus lobata])

HSP 1 Score: 201.1 bits (510), Expect = 8.5e-48
Identity = 101/184 (54.89%), Postives = 130/184 (70.65%), Query Frame = 0


Query: 1   MDPRLMNAVRQNDVESFMNLIGEDAAGIILKQRSEAG-NTVLHEAARHGHVKLVKEIVKR 60
           MDPRL+ A+ +ND  +F+NL+ E+     L+QR++   +TVLH A+R GHVKLV EI+K 
Sbjct: 645 MDPRLLEAIARNDKSTFINLVQENEN--FLEQRTDGSRSTVLHLASRFGHVKLVMEILKL 704

Query: 61  WPESPAEKNLKLETPFHEACAHGHADILLFLLETDPWASFGLSHENQSLLFVACSRGHVD 120
            P   AE N KLETP HEAC+ GH ++L  LLE +PWA+  L+ +NQS  F+ACS GHVD
Sbjct: 705 RPMVAAENN-KLETPLHEACSRGHTEVLKLLLEHNPWAACKLNADNQSAFFMACSHGHVD 764

Query: 121 VVKILAKQPWLQNLNDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSGL 180
           +VK+L  Q WL  L   D+G DP+C   AASRGH GVV ELL+ FP++  KVDKNG+S L
Sbjct: 765 LVKLLLNQSWLVGL--EDEGFDPTCLHVAASRGHTGVVRELLNVFPDLAWKVDKNGYSPL 823

Query: 181 HKAC 184
           H AC
Sbjct: 825 HHAC 823

[Close]

BLAST of Lcy02g006270.1 vs. TAIR 10
Match: AT5G60070.1 (ankyrin repeat family protein )

HSP 1 Score: 87.8 bits (216), Expect = 9.8e-18
Identity = 54/187 (28.88%), Postives = 92/187 (49.20%), Query Frame = 0


Query: 2   DPRLMNAVRQNDVESFMNLI-----GEDAAGIILKQRSEAGNTVLHEAARHGHVKLVKEI 61
           D +L++AVR+ D  +   ++      ED    +L+++++ G T L+ AA +G   +V E+
Sbjct: 33  DSQLLSAVRRGDFSAVKEILSNHMESEDELRDLLRKQNQCGETALYVAAEYGDADVVAEL 92

Query: 62  VKRWPESPAEKNLKLE-TPFHEACAHGHADILLFLLETDPWASFGLSHENQSLLFVACSR 121
           +K +    AE   +    PFH A   G  D+L  L+E  P  S  +   N + L  A ++
Sbjct: 93  IKYYDLEDAETKARNGFDPFHIAAKQGELDVLRVLMEEHPELSMTVDLSNTTALHTAAAQ 152

Query: 122 GHVDVVKILAKQPWLQNLNDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNG 181
           GHV+VV+ L +     +L    +    +    AA  GH  VV+ ++   P+   + DK G
Sbjct: 153 GHVEVVEYLLEAAG-SSLAAIAKSNGKTALHSAARNGHAEVVKAIVAVEPDTATRTDKKG 212

Query: 182 FSGLHKA 183
            + LH A
Sbjct: 213 QTPLHMA 218

[Close]

BLAST of Lcy02g006270.1 vs. TAIR 10
Match: AT3G09550.1 (Ankyrin repeat family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 53/156 (33.97%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 29  ILKQRSEAGNTVLHEAARHGHVKLVKEIVKRWP-ESPAEKNLKLETPFHEACAHGHADIL 88
           ++ + +E G T L  AA  G++ +VKE++     ES  +KNL      H AC+ GH  I+
Sbjct: 135 VVNEVNELGETPLFTAAEKGNIDVVKELLPYTTIESLMQKNLSGFDALHIACSQGHRSIV 194

Query: 89  LFLLETDPWASFGLSHENQSLLFVACSRGHVDVV-KILAKQPWLQNLNDHDQGLDPSCFL 148
             LLE +P  S  ++  N + L  A +RGH +VV ++LAK     +L +  +    +   
Sbjct: 195 QLLLEHEPQLSKTVAQSNATPLVSAATRGHSEVVNELLAKD---SSLLEISRSNGKNALH 254

Query: 149 EAASRGHLGVVEELLDNFPEVGLKVDKNGFSGLHKA 183
            AA +GH+ +V  LLD  P++  + DK G + LH A
Sbjct: 255 LAARQGHVDIVRTLLDKDPQLARRTDKKGQTSLHMA 287

[Close]

BLAST of Lcy02g006270.1 vs. TAIR 10
Match: AT2G31820.1 (Ankyrin repeat family protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.7e-17
Identity = 58/185 (31.35%), Postives = 89/185 (48.11%), Query Frame = 0


Query: 2   DPRLMNAVRQNDVESFMNLI---GEDAAGIILKQRSEAGNTVLHEAARHGHVKLVKEIVK 61
           D  L  A R  ++     LI   G++   ++ KQ  E G T L+ AA +GH  +V+E++K
Sbjct: 152 DSSLHIAARTGNLSKVKELIRGCGDELKELLSKQNLE-GETPLYTAAENGHSIVVEEMLK 211

Query: 62  RWP-ESPAEKNLKLETPFHEACAHGHADILLFLLETDPWASFGLSHENQSLLFVACSRGH 121
               E+ +        PFH A   GH ++L  LLET P  +        + L  A ++GH
Sbjct: 212 HMDLETASIAARNGFDPFHVAAKQGHLEVLKILLETFPNLAMTTDLSCTTALHTAATQGH 271

Query: 122 VDVVKILAKQPWLQNLNDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFS 181
           +DVV +L +     NL    +    +    AA  GH+ VV+ L+   P +G + DK G +
Sbjct: 272 IDVVNLLLETD--SNLAKIAKNNGKTALHSAARMGHVEVVKSLIGKDPSIGFRTDKKGQT 331

Query: 182 GLHKA 183
            LH A
Sbjct: 332 ALHMA 333

[Close]

BLAST of Lcy02g006270.1 vs. TAIR 10
Match: AT3G12360.1 (Ankyrin repeat family protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 57/169 (33.73%), Postives = 84/169 (49.70%), Query Frame = 0


Query: 15  ESFMNLIGEDAAGIILKQRSEAGNTVLHEAARHGHVKLVKEIVK-RWPESPAEKNLKLET 74
           E F   + E  A I+  + +E G T L  AA  GH+ +VKE++K    ES A+KN     
Sbjct: 108 EEFDAEVAEIRASIV-NEVNELGETALFTAADKGHLDVVKELLKYSSRESIAKKNRSGYD 167

Query: 75  PFHEACAHGHADILLFLLETDPWASFGLSHENQSLLFVACSRGHVDVVKILAKQPWLQNL 134
           P H A   GH  I+  LL+ D   S      N + L  A  RGH +VV  L  +    NL
Sbjct: 168 PLHIAAIQGHHAIVEVLLDHDATLSQTFGPSNATPLVSAAMRGHTEVVNQLLSK--AGNL 227

Query: 135 NDHDQGLDPSCFLEAASRGHLGVVEELLDNFPEVGLKVDKNGFSGLHKA 183
            +  +  + +    AA +GH+ V++ LL   P++  ++DK G + LH A
Sbjct: 228 LEISRSNNKNALHLAARQGHVEVIKALLSKDPQLARRIDKKGQTALHMA 273

[Close]

BLAST of Lcy02g006270.1 vs. TAIR 10
Match: AT1G10340.1 (Ankyrin repeat family protein )

HSP 1 Score: 78.6 bits (192), Expect = 5.9e-15
Identity = 48/185 (25.95%), Postives = 89/185 (48.11%), Query Frame = 0


Query: 5   LMNAVRQNDVESFMNLIGEDAAGIILKQRSE-AGNTVLHEAARHGHVKLVKEIVKRWPES 64
           + +A+ +ND+ +F+ L+ +  + +  +   E   NTVLH AA+ GH +LV +I++  P  
Sbjct: 4   IFHAILKNDLPAFLELVEDSESSLEERNEEEHLNNTVLHMAAKFGHRELVSKIIELRPSL 63

Query: 65  PAEKNLKLETPFHEACAHGHADILLFLLETDPWASFGLSHENQSLLFVACSRGHVDVVKI 124
            + +N    TP H A   G  +I++ +LET        +  N + L +AC    ++  ++
Sbjct: 64  VSSRNAYRNTPLHLAAILGDVNIVMQMLETGLEVCSARNINNHTPLHLACRSNSIEAARL 123

Query: 125 LAKQPWLQNLNDHDQGLDPSCFLEAASRGHLGVVEELLDNFP-----EVGLKVDKNGFSG 184
           +A++          Q +     + A S G   +V  +L+ FP     E  +  D +  + 
Sbjct: 124 IAEK---------TQSIGLGELILAISSGSTSIVGTILERFPDLAREEAWVVEDGSQSTL 179

The following BLAST results are available for this feature:

BLAST of Lcy02g006270.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7A2	2.0e-15	33.73	Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana OX=3702 GN=ITN1 P...	[more]
A2CIR5	2.3e-11	32.94	Ankyrin repeat-containing protein NPR4 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
P16157	3.9e-11	32.89	Ankyrin-1 OS=Homo sapiens OX=9606 GN=ANK1 PE=1 SV=3	[more]
Q02357	3.9e-11	32.89	Ankyrin-1 OS=Mus musculus OX=10090 GN=Ank1 PE=1 SV=2	[more]
Q9VCA8	1.5e-10	30.27	Ankyrin repeat and KH domain-containing protein mask OS=Drosophila melanogaster ...	[more]

BLAST of Lcy02g006270.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DH91	2.3e-54	60.54	ankyrin repeat-containing protein At2g01680-like OS=Momordica charantia OX=3673 ...	[more]
A0A6J1DJ89	4.7e-52	58.92	ankyrin repeat-containing protein At2g01680-like OS=Momordica charantia OX=3673 ...	[more]
A0A6J1DL07	1.4e-51	60.00	ankyrin repeat-containing protein At2g01680-like OS=Momordica charantia OX=3673 ...	[more]
A0A6J1DL48	3.4e-50	57.30	ankyrin repeat-containing protein NPR4-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A7N2LNW6	4.1e-48	54.89	ANK_REP_REGION domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Lcy02g006270.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153605.1	4.6e-54	60.54	ankyrin repeat-containing protein At2g01680-like [Momordica charantia]	[more]
XP_022153557.1	9.7e-52	58.92	ankyrin repeat-containing protein At2g01680-like [Momordica charantia]	[more]
XP_022153566.1	2.8e-51	60.00	ankyrin repeat-containing protein At2g01680-like [Momordica charantia]	[more]
XP_022153606.1	6.9e-50	57.30	ankyrin repeat-containing protein NPR4-like [Momordica charantia]	[more]
XP_030969858.1	8.5e-48	54.89	uncharacterized protein LOC115990141 [Quercus lobata]	[more]

BLAST of Lcy02g006270.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60070.1	9.8e-18	28.88	ankyrin repeat family protein	[more]
AT3G09550.1	1.3e-17	33.97	Ankyrin repeat family protein	[more]
AT2G31820.1	1.7e-17	31.35	Ankyrin repeat family protein	[more]
AT3G12360.1	1.4e-16	33.73	Ankyrin repeat family protein	[more]
AT1G10340.1	5.9e-15	25.95	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 70..99 e-value: 0.15 score: 21.1 coord: 104..135 e-value: 3.5 score: 16.6 coord: 140..169 e-value: 92.0 score: 11.9 coord: 36..66 e-value: 1.3 score: 18.0
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 36..68 score: 8.68292
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 2..183 e-value: 9.6E-28 score: 98.8
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 5..183
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 5..92 e-value: 7.9E-10 score: 39.2
None	No IPR available	PANTHER	PTHR24177	CASKIN	coord: 27..171
None	No IPR available	PANTHER	PTHR24177:SF176	ANKYRIN REPEAT PLANT-LIKE PROTEIN	coord: 27..171
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 36..59 score: 8.613973

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy02g006270	Lcy02g006270	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy02g006270.1.exon2	Lcy02g006270.1.exon2	exon
Lcy02g006270.1.exon1	Lcy02g006270.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy02g006270.1.cds2	Lcy02g006270.1.cds2	CDS
Lcy02g006270.1.cds1	Lcy02g006270.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy02g006270.1	Lcy02g006270.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding