Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAACTCGGTTCCTCGACATTGATTACTTCGCCACAGGAAATGAATCCTTCCACTGCCTCCCTCTCCCTCATCTCACTTCGAAGCCGCTTTCCACCGTCGGCGACCTCCTCCACTTTGATTTTGTCCCTGAAATCTCTCTCGGAATCGATAGGTTAACGATCGATTCTGCTCTTTCCAAGTTCTTTGACGACGTTCTTCCTCGGAGAATCGACGATGATAATGATTTTCGCGATGCTAGAGGTCAGTCTTCGAGGTTCCAAGGTTCCACGGAGAGGTTTTTCTCTACGGAAAGTGATGAAACTCGATTCCTGGAGGTAAATCTTTTTGCTTAATCAATGCAGTTTTCGATTTCATTTAAGAACTCGGATTAACGTTCTTTACTGATGTCGGCTGGAAAAAAATGCTGTTCATAAGAGATCCTACGACGTTTATGTTTAATAATAGGACAGCAAGCTTAATTGATTCGAGGAGCTCATCAGTTGAGTTTTTGCGATTCTCAAGGTTACCAAAGATAATGTTCTTCAGAGGCTATTCTCAATACAGCTTTGTTTGATTATGTAATCCTTTTTATGGGAAGCCGGAGCGGTGGTCGAACTCAAGAGTTAGGTCCTTGTGAGGCAAAATATTGTTAACTGAAGCATTGTTAAGAACATGAAATGAATTCCGATATGGATAATTTTATACATGTTTTTCATGTAAATCTAATTTGAGATGTTTTGGGTGAACTCTTGTGATTTATATTTCTGTCTTCCGATCTAACTTTTCCCCAGAAATGCATCTTAAAGAATGCTGTCCTTTCTCTGGCTCATTTTTATGGATTGCAGGAAGAAGACAAGGTTATTCGCAAAGATAATGTGGACGGGGACTGGAAGAACTTTGGATCTGAAACTTCAGAGACTGAATTTGTAAAAGTGCAATTCCGGCTTTCTTGTGCTAAATTACTTTTGTTACATTGTTATGGTTTAATGAGGATTTGAATGTATAAACTATGTTGTGGCAGAAGGATATTGGGACTGATATAAGGAATAGAAACCTCGCATACGATATGATCCAATTTGAAACACCTCAGCTTGATGCATTCTTGGTAGGATGTACGCCTATTGAGAGTGAAGATTTTAATGCAATTCTGGTTTATTCTACTTGACTAATCCTTGGTTACGTTTTATTTATTATTTTGCTTTATATCTGCAGGAAATTGCCTTCTTGTTTGAAAAGGAGGAGGTACTAATTCTTACGGTATTGCCAGAGGGTGAATTTAATCTTGTAAGTGGAATATCCTTGTAAATAATTTCCTTAATTGTTGTAATAAGCTAGACTTTATTGTGTCTTAGTATTCTTAGACATAACAGGAATATTAAGACTTTAAACATTTTTGCATATCATAGGATTCTGATAGACAATGGTATAAGAAACTATGGAATCTGGTTTAGAAGATATTATTTTAGAACAAGGGAAATGATAAAGTGATTATAATTGATTGACAATGGAATGAGCAGTTACAAAATCCGGTTTAGAAGGCATTATCTCAGAGCAAGGAAGATGATAAAATGATTATAATTGATAGACGATGAAATAAGATGTTATGAAATCTGGTTTAGAAGACATTATTTTAGAATAAAGTAGATGATAAAGTTATTGTAATTAGACAGTGGTGCAAAATGTTTTTCAAATCTTTGCACCTTATCTTAAGGGAGGATTTTGCTTGGAGGAGGAAGATAATGAGTTTTCTCTCATTCTTATTGTGACATTAGAGGATTGACAACTTAAAGTGTCTTGACTAGAAATAATGATTAATTCCTTTAGCTAGTTCTTGTTAACATCATTGGAGGTACATTGAAAGTCACATAGAAAGAATGCATAGTCTCTCTATTTTCTGTTTCCTGATTGAATATTTGTGGAATATGGAGATAATATACGTTTGCAACATTCTGTTTATTGCAGAATAATAAAAATGATAGCTTTTCCTTTCAAAATTTGAGTGATATATTCTGTCATTTAGTCAACTTTTTATATTCTGCACTCATTTTTCTTAAATCATTTTTTTGAATTATCCTGAAAATTGCTTTAAAAGGTTTACATATGTTTACTATAATCCTGGTGATGATAGTGTAAACCCGACTGTCGGTTGGTTTCTTATAACTAATTAGCTCTTTCTATTTAAGATTTTCACTACTATTTCTTTCACACGGATGAATTTTTTCGTTTTCTGAGTTTCTTTCTTTCTTGTAGAACCTTTTTTTTTTCCTGGGTGAAATCTAAAAAATTAAAGAAGTCTAACTGTTTTTTTAGTTCAACAATTGTGGGGATGAGATCAAACCATTAACCTCTGGGATGGTAATTGGTGCTTTATCTATTGAGTTATGCTTGGATTAGTTCTAAAGAAGTCTAACTTCCTCTGCATTTTCCTTTTTTCTTTTTTATTTTGCAATTTTTAGTTATAGGTAAACATGACGATAATCTGGATATTTATTGCAGGAGACTCTTAATCAAGGGCTTCTTAGATACCCTTCCGAGATCAAAGAATCAGTTTATGCCGTGGAACGCATTACCTCAGAATATCTCTTGGACCAAAGATCTTGCTTGTTTGAAGATGATTTTGCTCAGGACCAGAAGCTATTGCATCAATTGAATTTTCCATTTTTAGAAGTAGATGAGATGGTTCTTGAAATTTTGGCGTTCTTGTCCTTGCAGGATGAACTTTTTTTTATTCTTAAAAATACTGAATCATCACACAGGATACAAGATGATAATTTGCTTGTCAATAATGAAGAATATTTGTGCTCCATGAAGTATGACGTTGAAGAGTTTCTTTCAGATCATTTTTTGAGGCCATGTGCTGTTTCTGAGTTGGCATCCCATGTTAGTTCTGGAGGTTCAGACTTAATGAGCATGATGGAAACTTTGGAGATTCCAGTAAGCTCTGGAGTTCAAACAAAATCAAGTTGCGATTGGCTTGTAGGACCGGCTATTTTTGAAGAGTTCCAGCTGCTGGACATATACTCGAATCGACCTTTTGAAGTCTTCTTTGATTTGGAATTATCAGCCGTGTCAGAAATTAGTGACTGTATGACCATTGAAAACACAAATTTCAAGAGTTTCAATGAATTGATTGTTTGTCATGAACTTGCCCTGGTAGATGATACGTTCAAGTCATTACCTGTACCTATCCTATCTAGTCAGGGACCTGAAAGATCCTTGTATGCCTTCATAGAGGATGTATTAGCTAACCTAAATGGACAATCCTTATCTGCATCCGACAGCATATATTTGGATTGGCTTCTATTGGAAGAAAATAGCTGCAGCTCTGGAATTTATTCTTCGTATCAGAATATGTTGGAAGAAATTAATTTGAAACCAGTAGAATTTGATCAGGAACCTTGTGAAAAGGATAGTATATTTTATAGATATGTTTTCTCAGATGATACTTTAGTCAGAGAAAGAACAGAAGACGAGGTTGAGTTAAAGGAGTCTTTGACTGATGGTATTTCAATACTTCCTAGTCAGACTATTAACGTTGCTTCAAGCAAATTATTGAATGACAGATGTCAACAAAAAGGAAGGCAAATTCTTGCAGCTGTTGTAAATACCGAGAAGGCCTTATTGTCATGGAAATCAAAGTCAGAGTCCAATGATCTCAACTTTTTCTTGAATTCTCAAAAACCTGCTGGTTCGAGAAAGGGTGAATCTGTATTTAGTGCAATCGACTGCAATACTATGCTCCCCAAGGTTCCATGTGATGGACAATTGACCAACCAGCCTTCTATGTCCACTGCTGATGTTAGTATGAAGCAATTGAATGTTGCATTACATCAAGTTTGTCTGTCTGATAATATTCTAGATCTCATCAACAACTCTGAGAAAATTTATGTAGCTATCTTGCAGAATGAGACAGAGCTTAGGAAGACGTATCTTCCATATGTAGCTGAAGATTATTTTTTAATGGTCAGCCTTCCAAAACAGAAGTTGATAGACTGTATTAAAAAAATATATTTGCAGGGAACTAGTAATTACTGGGAAGAAAAAATAATGACATTAGCCACGTTATATGCCACTAAACAGATAGCTTGGTATTTGTGTTTCTATGGTATCCACCCAGCTCATCTATATCTAAAGAAGTTATGTCAGAGCTTGGAGTGCTTAAAATCGAGGTTGGGTTTCTTGGTGTCCTTGATTGAGGATGCAGGAAGAATGGTTGACAGAGAAATTACCCTATCACATCCAGCACTTACTACTATCCAGGACATCTTATGCTCAAAGACTTCTACTAGTACTCTCAAAGTTCTGGTTGTAGCAAACCAAATTTTCTGGTGGTCATTGAAAACATTGTTCGGGTCCATGGGATTATCTTTTGAAGAGCTAAATTATGAGAGTCCTACAGATCGGCAAGTATCTAACGCAAACATTATGGTGGATAACTTTGTTTCCAATTGCTTATTGGTATCCCAAGAGTAAGTTCCAGCTTTACTACGTAAACATTTCACGAGCTCCTTGTTGTAGGTACATGCTTTATATGCTTAACCAACTTAACATGTAATGAACAATGAGGGAGGTGGGCATGGATGCTTAAACATTCACTCCATTATCAGTTGATAACTTTCAATGCAGGCTATGCACCAACAGTTGAACCTATGGTCTGAGTTTCATGAGATTCTTAACTTTATTTTCTTCGATTATGATTTTTTAGTGCATTATAGATTTATTTTCCCTCAAGCTACCATTTCATTTGTTATTCAATGTTTGTCACACAAACTAATTAGAGCCATAAATAGGGAATATTCAATGTGGAATATCATATATTTGCATGCTGTAATCCATCACATGCAACATTTAAATGAAAAAGGACTGGAGAGAACTCTAGGAAACCATGTCAGAAAGAAAAAAAACCCTTTGTTTCATCGAATTGTTTTTCCTTATGGAATATTTTGTATCCAGGGCTAGATGTTGTGTTATATATTCTAATTTGAAACTAATTTTATCCCTTAATTTTGAATTGATGAGAAGAATACCTTCCTCGTTGATCTGACAAATTTAACTTGTACATGCCTATTGGAGTGCTTTTATTTTTTTTCCTTTGATAGGGTTTTTCCCCTTAAACTTATTGTCATAGCTGTCTTATCTTTCTTCAAAAATATGTATGTTAATTTTTCTTTTTCCTTTCGGTATTGTAAAGAAACTAGCCGATGCTCAAAAAGAGATTGAAATTCAAGTGTATGAGGTAGTTTTTTCTTTTAACAATAGTGAATTGTGACATTGTGTTCCCATGCTTCTTGTATGATTAAAAATAAATTTGAAATTGAAACGTATGGATTTAAAATGCAATACTCCTGGTACTGCAACTTCCAGAATATTTCTTTCATCCAATTTTTTGCTTTATGATATTGCGTTGAATTCTCAGTTATTATTATGGCACATTCTAAATTCAATTGTGTGCTTTAAAGATCTAAAAATGTTTGTTCTTCCCCAATTTCAAGGCACATATCTGGAAGTTTTCCATTCAACAAATTTAGCATTATCTTGGAATATGGAGGTCTGAATGGTTCTTCTCAGATCTCCACTTATTTTTCAAAATTAATCAACATGCCCCATCTACACTTTGTAATGTTGGAGCTGGATAAGTGTGGAAATTGCAAAGCATTTTGTGAAGCTGTTGATTTGCCTCAACATAATGAACTGACAATTGTAAGTTTGCTCCTTTTCGCATGCAAATTTGTTGATAATAATATCTATTGCTATGAAGTAAAGCCAATGATTAGTATGGGATTACATGCTTTTATTGAGTTGGCAAAACTATTTTAACTTATCTATACATAAATTACATTTGGTTAATGTTATCTGTATCTATTCTTAGGAAGAGAAGTCCTTGGTGGAGAATCAGACCAGGACGTTAGAGAAATTGTTGAACTTTTTACCTGTTGCGGAAAAGTATATACTGGCATCTCCAGAGGCAACAATTGAAGCAGAGGATGGCAGAGTGCCTCTGCAAGTGCCAGTAGTACCAGTTTTAGATAAATCTCAACATATTGACCTCATGTCCGTTCCTGAAGCAATTGTTATTGTGAACACTCAGAAATTTGAAAAGGAAATGATTGTATCTAGAAGAAGTTCTTATCAAAGAATTCTTGCATTGGAGAAAGAAGGTGTGCAGGTTGTGGAACGAGACTTGAGTTGGCCTGTGGATCTAATAATTACTTCTGGAGTTTGCTTAATGTGGTATGACTGCACAAACATTCACAGCAAAGCCAGTACTTCAAATGAAGCTTCTTCGTGCTTGAATTTATGCATAGAGAATATTGCAACAGATGTTTTGACATCTCTAAGTTTTGCTTTTAGTGGTTGCGTTCTGGTAATTTTTCTACCCTATGAAGACTGTCTATTTATTATTATTACTTATGAAGAGACTATCTCCCATTACCTTCTTCCTTTTCTGACTCCCTCCCTATGCATTTGACATCATTGTCATACTTTTATAGCTGAATTACTTGAGCATACCCTTGTGTTCTTGGAGATGCCAGAGTTATTTTAAATTTTATTGAAGGTTATAAACTGGATCTTGCTGCCAGCCACATGCTATGGGTCCAGATGATCAATATGAAAAATCATTGTTTTTAGTTACAAGGCAGGAAAGTGCCAGAAAAAGAAAGGTTTGCTAGATTACGAAATTGAACCAAACCTGTCAATTCAACACATTGTTTCCAAGTCCTAGGTAGTGGCATTTCATCAAAATCCACGGAATTTGATTGAAGCAATAATTTTAGATACTGATTCTTTGAACTTGTCCCTTCCCCAAAACACATCCCCGAGCACTTGGTCGTTCGTGGAAAATAGGAGTCCTTAATTTCCTGGAGTTTGCAAACAGGCTTGTATACTGTTTTTCATTTTCTTTTAGTATTCAAGATTTGGTTCGTATTCACTCATCTCTGATATTGCAATTATCAAAAGTGATGATCGAAATTGTGCAAAAACGAAAAAGAAAATTTAGGAAAGGGATTACAATGTTTGCATGATTATATCTGTCTCTAGAATCTTACATTCATTATTAGCTGTACTACAATTCCTGCATTTGCTAGCATGGACATGAAAATTCTGTCATCACAGTGCAGGAATTAATTGGTTAAAAGATCTCAGTAGACTGAAACTTGATTGTTGCTTGATGTTGGTTTATTTCAGCCAGCAGTGGGTCCATAATCCGTGATATTGGTTATTCTCTCTTTTGATACAAATAGTAGATTTTTCTTCAGGTCTTTGAGGGAGAAATCAGTTCCCTTTCCATCGTAATGGAATCATCCGATGGACTTTATGCTGCAGCAGCAAGTTTAGAAATTGATTTTCAGCTCTTCTGCTCCTATTCGTCCGATTTGACAGATGAAATTATCCTGAGCTGCATTGAGAATGTTTCTAAGTTGGTGGCTAGGCACCTATACCCCAAGATGTCTGAATCAGAAACTCTTGCAGAATCATTTCTTACGGGTTTCCCTTCAATTAATCCTTTGACAGCTCACGCGATACTTTCTTCAGAAAGCATTCTTGCTGACTTTCTAGAGTGGCCACATGAGCGCAGGCTCCATGCAATTAAAAAATATTGTATTCCTGATGAAAGTGTCTCTCTATTTAGTGCTCTGTGTAAATATGGTGAGCGGGAGGATTCAAAATCCGTGATGACTGACTGCTCCTCTTCGGTATCTTCTGGTCATGATTCAGAAAAGTGTCACTTTAATGGTAATTCTGAAAGAAAGAGAAGAAACTTCACTGGTGGTACCCAATGCATTGATAAAAATATGGATCTTTTGAATACCAATACGCTGAATCTATTTACTCCTGGCACTACAGAAACTTTAGCAGCATCCAAGTCATTTGGTTCTCAAATGTTTGAAGATTCCGAAATCTTTTGTGATCTCAAAGGGCTATCTTCATCTGTGAATCATTTCTTCGATCAAAACCATAATCTAGAGTCTTTTGATGCAACTATATTGATGGATCCTATCAGTGTCTGTAAGCCACGTGATTCTTGGATCTCTACGGCTCCTGAAATATCCGATGAGATTAGAAGGGGTTGTTCATCATATGTTCAGAATCAGGGATTAGACCCAAATGAAAAGAAATTACAGAACTTGCATAATATGAATAAGCCTGAGAATCAGCATGAGGAGCTCATAGGTGAAGTAGTCAACCTGATTGATAACCCTGTATTAAAAGATGACTTTGCAACTATGACTCCTATGAATTTCTTGCCTTCGATGCTTGATAATGAAAAAGATTCATCAAGAAAGTCTAAAATTCAAAAAAGATTGTCTTATGGACAAAGCGATCACCCTTTCTGTGCAGTTGATATTGCTAACAACTCAAGTTCAGATTTTTGGAGTTCTATCAATTTGCATAGGCAGAGTTCAGAAGGATTGGACAATCATTTTCCAGATCCTAGTTTCAAACCCAGTATTGTGCCTCTTAGGTACAAGGATGATCACTCAGATGAGGGTTTTATACAAAATTCTACAAGAGATTCAAAAGTATTATTTTCACTGTCAGAGAAGGACACATCACATTCTGATGTAACCCCATTGTCCATTGCTCTCCGTTCAAAACATCTGCAAGAAAGTTCACCTTGGACCATGGAGTTTCTTAACCGAGTTAGGGAAAAAAGCAGAAATCGTCGGCATTCTGTTCCACGTGGCTCATCTTCCCCTTTCCCCGAGCATTTGGGTAATGTAAAAAAAACTGTTAAAAGGAGAAGTCCCTCTATTCTTGAATTTTTTAAGTACCAAGGGGGCAGCACTCAGAGGAAGAAACCGGAGCAAAAGAGACAGAAACAATCAATGCAATCATCAAACTCATCCAAGAATGTATTAGCTCCAACTAGTGAACTTTCTTCAGGGACGCCTATTGATAAAAGATCAAGACAGGTTTGTATGTGCTTATTTCGGATATCACATGTTAGACATTATTTCTACATTCTTTTAAAAATTTTCACTGAAATCAATTTTAGACTTTATCTTTTGCAATTGATGGGAACGGGAGCCAAACTAAGCTAGTCTGGAGCAATGACAACTACGGTTTAGGAAAAAGCTGACAAAAACTTGGTAATAAATGATGCA
mRNA sequence
ATGCGAACTCGGTTCCTCGACATTGATTACTTCGCCACAGGAAATGAATCCTTCCACTGCCTCCCTCTCCCTCATCTCACTTCGAAGCCGCTTTCCACCGTCGGCGACCTCCTCCACTTTGATTTTGTCCCTGAAATCTCTCTCGGAATCGATAGGTTAACGATCGATTCTGCTCTTTCCAAGTTCTTTGACGACGTTCTTCCTCGGAGAATCGACGATGATAATGATTTTCGCGATGCTAGAGGTCAGTCTTCGAGGTTCCAAGGTTCCACGGAGAGGTTTTTCTCTACGGAAAGTGATGAAACTCGATTCCTGGAGGAAGAAGACAAGGTTATTCGCAAAGATAATGTGGACGGGGACTGGAAGAACTTTGGATCTGAAACTTCAGAGACTGAATTTAAGGATATTGGGACTGATATAAGGAATAGAAACCTCGCATACGATATGATCCAATTTGAAACACCTCAGCTTGATGCATTCTTGGAAATTGCCTTCTTGTTTGAAAAGGAGGAGGTACTAATTCTTACGGTATTGCCAGAGGGTGAATTTAATCTTGAGACTCTTAATCAAGGGCTTCTTAGATACCCTTCCGAGATCAAAGAATCAGTTTATGCCGTGGAACGCATTACCTCAGAATATCTCTTGGACCAAAGATCTTGCTTGTTTGAAGATGATTTTGCTCAGGACCAGAAGCTATTGCATCAATTGAATTTTCCATTTTTAGAAGTAGATGAGATGGTTCTTGAAATTTTGGCGTTCTTGTCCTTGCAGGATGAACTTTTTTTTATTCTTAAAAATACTGAATCATCACACAGGATACAAGATGATAATTTGCTTGTCAATAATGAAGAATATTTGTGCTCCATGAAGTATGACGTTGAAGAGTTTCTTTCAGATCATTTTTTGAGGCCATGTGCTGTTTCTGAGTTGGCATCCCATGTTAGTTCTGGAGGTTCAGACTTAATGAGCATGATGGAAACTTTGGAGATTCCAGTAAGCTCTGGAGTTCAAACAAAATCAAGTTGCGATTGGCTTGTAGGACCGGCTATTTTTGAAGAGTTCCAGCTGCTGGACATATACTCGAATCGACCTTTTGAAGTCTTCTTTGATTTGGAATTATCAGCCGTGTCAGAAATTAGTGACTGTATGACCATTGAAAACACAAATTTCAAGAGTTTCAATGAATTGATTGTTTGTCATGAACTTGCCCTGGTAGATGATACGTTCAAGTCATTACCTGTACCTATCCTATCTAGTCAGGGACCTGAAAGATCCTTGTATGCCTTCATAGAGGATGTATTAGCTAACCTAAATGGACAATCCTTATCTGCATCCGACAGCATATATTTGGATTGGCTTCTATTGGAAGAAAATAGCTGCAGCTCTGGAATTTATTCTTCGTATCAGAATATGTTGGAAGAAATTAATTTGAAACCAGTAGAATTTGATCAGGAACCTTGTGAAAAGGATAGTATATTTTATAGATATGTTTTCTCAGATGATACTTTAGTCAGAGAAAGAACAGAAGACGAGGTTGAGTTAAAGGAGTCTTTGACTGATGGTATTTCAATACTTCCTAGTCAGACTATTAACGTTGCTTCAAGCAAATTATTGAATGACAGATGTCAACAAAAAGGAAGGCAAATTCTTGCAGCTGTTGTAAATACCGAGAAGGCCTTATTGTCATGGAAATCAAAGTCAGAGTCCAATGATCTCAACTTTTTCTTGAATTCTCAAAAACCTGCTGGTTCGAGAAAGGGTGAATCTGTATTTAGTGCAATCGACTGCAATACTATGCTCCCCAAGGTTCCATGTGATGGACAATTGACCAACCAGCCTTCTATGTCCACTGCTGATGTTAGTATGAAGCAATTGAATGTTGCATTACATCAAGTTTGTCTGTCTGATAATATTCTAGATCTCATCAACAACTCTGAGAAAATTTATGTAGCTATCTTGCAGAATGAGACAGAGCTTAGGAAGACGTATCTTCCATATGTAGCTGAAGATTATTTTTTAATGGTCAGCCTTCCAAAACAGAAGTTGATAGACTGTATTAAAAAAATATATTTGCAGGGAACTAGTAATTACTGGGAAGAAAAAATAATGACATTAGCCACGTTATATGCCACTAAACAGATAGCTTGGTATTTGTGTTTCTATGGTATCCACCCAGCTCATCTATATCTAAAGAAGTTATGTCAGAGCTTGGAGTGCTTAAAATCGAGGTTGGGTTTCTTGGTGTCCTTGATTGAGGATGCAGGAAGAATGGTTGACAGAGAAATTACCCTATCACATCCAGCACTTACTACTATCCAGGACATCTTATGCTCAAAGACTTCTACTAGTACTCTCAAAGTTCTGGTTGTAGCAAACCAAATTTTCTGGTGGTCATTGAAAACATTGTTCGGGTCCATGGGATTATCTTTTGAAGAGCTAAATTATGAGAGTCCTACAGATCGGCAAGTATCTAACGCAAACATTATGGTGGATAACTTTGTTTCCAATTGCTTATTGGTATCCCAAGAGCACATATCTGGAAGTTTTCCATTCAACAAATTTAGCATTATCTTGGAATATGGAGGTCTGAATGGTTCTTCTCAGATCTCCACTTATTTTTCAAAATTAATCAACATGCCCCATCTACACTTTGTAATGTTGGAGCTGGATAAGTGTGGAAATTGCAAAGCATTTTGTGAAGCTGTTGATTTGCCTCAACATAATGAACTGACAATTGAAGAGAAGTCCTTGGTGGAGAATCAGACCAGGACGTTAGAGAAATTGTTGAACTTTTTACCTGTTGCGGAAAAGTATATACTGGCATCTCCAGAGGCAACAATTGAAGCAGAGGATGGCAGAGTGCCTCTGCAAGTGCCAGTAGTACCAGTTTTAGATAAATCTCAACATATTGACCTCATGTCCGTTCCTGAAGCAATTGTTATTGTGAACACTCAGAAATTTGAAAAGGAAATGATTGTATCTAGAAGAAGTTCTTATCAAAGAATTCTTGCATTGGAGAAAGAAGGTGTGCAGGTTGTGGAACGAGACTTGAGTTGGCCTGTGGATCTAATAATTACTTCTGGAGTTTGCTTAATGTGGTATGACTGCACAAACATTCACAGCAAAGCCAGTACTTCAAATGAAGCTTCTTCGTGCTTGAATTTATGCATAGAGAATATTGCAACAGATGTTTTGACATCTCTAAGTTTTGCTTTTAGTGGTTGCGTTCTGGTCTTTGAGGGAGAAATCAGTTCCCTTTCCATCGTAATGGAATCATCCGATGGACTTTATGCTGCAGCAGCAAGTTTAGAAATTGATTTTCAGCTCTTCTGCTCCTATTCGTCCGATTTGACAGATGAAATTATCCTGAGCTGCATTGAGAATGTTTCTAAGTTGGTGGCTAGGCACCTATACCCCAAGATGTCTGAATCAGAAACTCTTGCAGAATCATTTCTTACGGGTTTCCCTTCAATTAATCCTTTGACAGCTCACGCGATACTTTCTTCAGAAAGCATTCTTGCTGACTTTCTAGAGTGGCCACATGAGCGCAGGCTCCATGCAATTAAAAAATATTGTATTCCTGATGAAAGTGTCTCTCTATTTAGTGCTCTGTGTAAATATGGTGAGCGGGAGGATTCAAAATCCGTGATGACTGACTGCTCCTCTTCGGTATCTTCTGGTCATGATTCAGAAAAGTGTCACTTTAATGGTAATTCTGAAAGAAAGAGAAGAAACTTCACTGGTGGTACCCAATGCATTGATAAAAATATGGATCTTTTGAATACCAATACGCTGAATCTATTTACTCCTGGCACTACAGAAACTTTAGCAGCATCCAAGTCATTTGGTTCTCAAATGTTTGAAGATTCCGAAATCTTTTGTGATCTCAAAGGGCTATCTTCATCTGTGAATCATTTCTTCGATCAAAACCATAATCTAGAGTCTTTTGATGCAACTATATTGATGGATCCTATCAGTGTCTGTAAGCCACGTGATTCTTGGATCTCTACGGCTCCTGAAATATCCGATGAGATTAGAAGGGGTTGTTCATCATATGTTCAGAATCAGGGATTAGACCCAAATGAAAAGAAATTACAGAACTTGCATAATATGAATAAGCCTGAGAATCAGCATGAGGAGCTCATAGGTGAAGTAGTCAACCTGATTGATAACCCTGTATTAAAAGATGACTTTGCAACTATGACTCCTATGAATTTCTTGCCTTCGATGCTTGATAATGAAAAAGATTCATCAAGAAAGTCTAAAATTCAAAAAAGATTGTCTTATGGACAAAGCGATCACCCTTTCTGTGCAGTTGATATTGCTAACAACTCAAGTTCAGATTTTTGGAGTTCTATCAATTTGCATAGGCAGAGTTCAGAAGGATTGGACAATCATTTTCCAGATCCTAGTTTCAAACCCAGTATTGTGCCTCTTAGGTACAAGGATGATCACTCAGATGAGGGTTTTATACAAAATTCTACAAGAGATTCAAAAGTATTATTTTCACTGTCAGAGAAGGACACATCACATTCTGATGTAACCCCATTGTCCATTGCTCTCCGTTCAAAACATCTGCAAGAAAGTTCACCTTGGACCATGGAGTTTCTTAACCGAGTTAGGGAAAAAAGCAGAAATCGTCGGCATTCTGTTCCACGTGGCTCATCTTCCCCTTTCCCCGAGCATTTGGGTAATGTAAAAAAAACTGTTAAAAGGAGAAGTCCCTCTATTCTTGAATTTTTTAAGTACCAAGGGGGCAGCACTCAGAGGAAGAAACCGGAGCAAAAGAGACAGAAACAATCAATGCAATCATCAAACTCATCCAAGAATGTATTAGCTCCAACTAGTGAACTTTCTTCAGGGACGCCTATTGATAAAAGATCAAGACAGACTTTATCTTTTGCAATTGATGGGAACGGGAGCCAAACTAAGCTAGTCTGGAGCAATGACAACTACGGTTTAGGAAAAAGCTGACAAAAACTTGGTAATAAATGATGCA
Coding sequence (CDS)
ATGCGAACTCGGTTCCTCGACATTGATTACTTCGCCACAGGAAATGAATCCTTCCACTGCCTCCCTCTCCCTCATCTCACTTCGAAGCCGCTTTCCACCGTCGGCGACCTCCTCCACTTTGATTTTGTCCCTGAAATCTCTCTCGGAATCGATAGGTTAACGATCGATTCTGCTCTTTCCAAGTTCTTTGACGACGTTCTTCCTCGGAGAATCGACGATGATAATGATTTTCGCGATGCTAGAGGTCAGTCTTCGAGGTTCCAAGGTTCCACGGAGAGGTTTTTCTCTACGGAAAGTGATGAAACTCGATTCCTGGAGGAAGAAGACAAGGTTATTCGCAAAGATAATGTGGACGGGGACTGGAAGAACTTTGGATCTGAAACTTCAGAGACTGAATTTAAGGATATTGGGACTGATATAAGGAATAGAAACCTCGCATACGATATGATCCAATTTGAAACACCTCAGCTTGATGCATTCTTGGAAATTGCCTTCTTGTTTGAAAAGGAGGAGGTACTAATTCTTACGGTATTGCCAGAGGGTGAATTTAATCTTGAGACTCTTAATCAAGGGCTTCTTAGATACCCTTCCGAGATCAAAGAATCAGTTTATGCCGTGGAACGCATTACCTCAGAATATCTCTTGGACCAAAGATCTTGCTTGTTTGAAGATGATTTTGCTCAGGACCAGAAGCTATTGCATCAATTGAATTTTCCATTTTTAGAAGTAGATGAGATGGTTCTTGAAATTTTGGCGTTCTTGTCCTTGCAGGATGAACTTTTTTTTATTCTTAAAAATACTGAATCATCACACAGGATACAAGATGATAATTTGCTTGTCAATAATGAAGAATATTTGTGCTCCATGAAGTATGACGTTGAAGAGTTTCTTTCAGATCATTTTTTGAGGCCATGTGCTGTTTCTGAGTTGGCATCCCATGTTAGTTCTGGAGGTTCAGACTTAATGAGCATGATGGAAACTTTGGAGATTCCAGTAAGCTCTGGAGTTCAAACAAAATCAAGTTGCGATTGGCTTGTAGGACCGGCTATTTTTGAAGAGTTCCAGCTGCTGGACATATACTCGAATCGACCTTTTGAAGTCTTCTTTGATTTGGAATTATCAGCCGTGTCAGAAATTAGTGACTGTATGACCATTGAAAACACAAATTTCAAGAGTTTCAATGAATTGATTGTTTGTCATGAACTTGCCCTGGTAGATGATACGTTCAAGTCATTACCTGTACCTATCCTATCTAGTCAGGGACCTGAAAGATCCTTGTATGCCTTCATAGAGGATGTATTAGCTAACCTAAATGGACAATCCTTATCTGCATCCGACAGCATATATTTGGATTGGCTTCTATTGGAAGAAAATAGCTGCAGCTCTGGAATTTATTCTTCGTATCAGAATATGTTGGAAGAAATTAATTTGAAACCAGTAGAATTTGATCAGGAACCTTGTGAAAAGGATAGTATATTTTATAGATATGTTTTCTCAGATGATACTTTAGTCAGAGAAAGAACAGAAGACGAGGTTGAGTTAAAGGAGTCTTTGACTGATGGTATTTCAATACTTCCTAGTCAGACTATTAACGTTGCTTCAAGCAAATTATTGAATGACAGATGTCAACAAAAAGGAAGGCAAATTCTTGCAGCTGTTGTAAATACCGAGAAGGCCTTATTGTCATGGAAATCAAAGTCAGAGTCCAATGATCTCAACTTTTTCTTGAATTCTCAAAAACCTGCTGGTTCGAGAAAGGGTGAATCTGTATTTAGTGCAATCGACTGCAATACTATGCTCCCCAAGGTTCCATGTGATGGACAATTGACCAACCAGCCTTCTATGTCCACTGCTGATGTTAGTATGAAGCAATTGAATGTTGCATTACATCAAGTTTGTCTGTCTGATAATATTCTAGATCTCATCAACAACTCTGAGAAAATTTATGTAGCTATCTTGCAGAATGAGACAGAGCTTAGGAAGACGTATCTTCCATATGTAGCTGAAGATTATTTTTTAATGGTCAGCCTTCCAAAACAGAAGTTGATAGACTGTATTAAAAAAATATATTTGCAGGGAACTAGTAATTACTGGGAAGAAAAAATAATGACATTAGCCACGTTATATGCCACTAAACAGATAGCTTGGTATTTGTGTTTCTATGGTATCCACCCAGCTCATCTATATCTAAAGAAGTTATGTCAGAGCTTGGAGTGCTTAAAATCGAGGTTGGGTTTCTTGGTGTCCTTGATTGAGGATGCAGGAAGAATGGTTGACAGAGAAATTACCCTATCACATCCAGCACTTACTACTATCCAGGACATCTTATGCTCAAAGACTTCTACTAGTACTCTCAAAGTTCTGGTTGTAGCAAACCAAATTTTCTGGTGGTCATTGAAAACATTGTTCGGGTCCATGGGATTATCTTTTGAAGAGCTAAATTATGAGAGTCCTACAGATCGGCAAGTATCTAACGCAAACATTATGGTGGATAACTTTGTTTCCAATTGCTTATTGGTATCCCAAGAGCACATATCTGGAAGTTTTCCATTCAACAAATTTAGCATTATCTTGGAATATGGAGGTCTGAATGGTTCTTCTCAGATCTCCACTTATTTTTCAAAATTAATCAACATGCCCCATCTACACTTTGTAATGTTGGAGCTGGATAAGTGTGGAAATTGCAAAGCATTTTGTGAAGCTGTTGATTTGCCTCAACATAATGAACTGACAATTGAAGAGAAGTCCTTGGTGGAGAATCAGACCAGGACGTTAGAGAAATTGTTGAACTTTTTACCTGTTGCGGAAAAGTATATACTGGCATCTCCAGAGGCAACAATTGAAGCAGAGGATGGCAGAGTGCCTCTGCAAGTGCCAGTAGTACCAGTTTTAGATAAATCTCAACATATTGACCTCATGTCCGTTCCTGAAGCAATTGTTATTGTGAACACTCAGAAATTTGAAAAGGAAATGATTGTATCTAGAAGAAGTTCTTATCAAAGAATTCTTGCATTGGAGAAAGAAGGTGTGCAGGTTGTGGAACGAGACTTGAGTTGGCCTGTGGATCTAATAATTACTTCTGGAGTTTGCTTAATGTGGTATGACTGCACAAACATTCACAGCAAAGCCAGTACTTCAAATGAAGCTTCTTCGTGCTTGAATTTATGCATAGAGAATATTGCAACAGATGTTTTGACATCTCTAAGTTTTGCTTTTAGTGGTTGCGTTCTGGTCTTTGAGGGAGAAATCAGTTCCCTTTCCATCGTAATGGAATCATCCGATGGACTTTATGCTGCAGCAGCAAGTTTAGAAATTGATTTTCAGCTCTTCTGCTCCTATTCGTCCGATTTGACAGATGAAATTATCCTGAGCTGCATTGAGAATGTTTCTAAGTTGGTGGCTAGGCACCTATACCCCAAGATGTCTGAATCAGAAACTCTTGCAGAATCATTTCTTACGGGTTTCCCTTCAATTAATCCTTTGACAGCTCACGCGATACTTTCTTCAGAAAGCATTCTTGCTGACTTTCTAGAGTGGCCACATGAGCGCAGGCTCCATGCAATTAAAAAATATTGTATTCCTGATGAAAGTGTCTCTCTATTTAGTGCTCTGTGTAAATATGGTGAGCGGGAGGATTCAAAATCCGTGATGACTGACTGCTCCTCTTCGGTATCTTCTGGTCATGATTCAGAAAAGTGTCACTTTAATGGTAATTCTGAAAGAAAGAGAAGAAACTTCACTGGTGGTACCCAATGCATTGATAAAAATATGGATCTTTTGAATACCAATACGCTGAATCTATTTACTCCTGGCACTACAGAAACTTTAGCAGCATCCAAGTCATTTGGTTCTCAAATGTTTGAAGATTCCGAAATCTTTTGTGATCTCAAAGGGCTATCTTCATCTGTGAATCATTTCTTCGATCAAAACCATAATCTAGAGTCTTTTGATGCAACTATATTGATGGATCCTATCAGTGTCTGTAAGCCACGTGATTCTTGGATCTCTACGGCTCCTGAAATATCCGATGAGATTAGAAGGGGTTGTTCATCATATGTTCAGAATCAGGGATTAGACCCAAATGAAAAGAAATTACAGAACTTGCATAATATGAATAAGCCTGAGAATCAGCATGAGGAGCTCATAGGTGAAGTAGTCAACCTGATTGATAACCCTGTATTAAAAGATGACTTTGCAACTATGACTCCTATGAATTTCTTGCCTTCGATGCTTGATAATGAAAAAGATTCATCAAGAAAGTCTAAAATTCAAAAAAGATTGTCTTATGGACAAAGCGATCACCCTTTCTGTGCAGTTGATATTGCTAACAACTCAAGTTCAGATTTTTGGAGTTCTATCAATTTGCATAGGCAGAGTTCAGAAGGATTGGACAATCATTTTCCAGATCCTAGTTTCAAACCCAGTATTGTGCCTCTTAGGTACAAGGATGATCACTCAGATGAGGGTTTTATACAAAATTCTACAAGAGATTCAAAAGTATTATTTTCACTGTCAGAGAAGGACACATCACATTCTGATGTAACCCCATTGTCCATTGCTCTCCGTTCAAAACATCTGCAAGAAAGTTCACCTTGGACCATGGAGTTTCTTAACCGAGTTAGGGAAAAAAGCAGAAATCGTCGGCATTCTGTTCCACGTGGCTCATCTTCCCCTTTCCCCGAGCATTTGGGTAATGTAAAAAAAACTGTTAAAAGGAGAAGTCCCTCTATTCTTGAATTTTTTAAGTACCAAGGGGGCAGCACTCAGAGGAAGAAACCGGAGCAAAAGAGACAGAAACAATCAATGCAATCATCAAACTCATCCAAGAATGTATTAGCTCCAACTAGTGAACTTTCTTCAGGGACGCCTATTGATAAAAGATCAAGACAGACTTTATCTTTTGCAATTGATGGGAACGGGAGCCAAACTAAGCTAGTCTGGAGCAATGACAACTACGGTTTAGGAAAAAGCTGA
Protein sequence
MRTRFLDIDYFATGNESFHCLPLPHLTSKPLSTVGDLLHFDFVPEISLGIDRLTIDSALSKFFDDVLPRRIDDDNDFRDARGQSSRFQGSTERFFSTESDETRFLEEEDKVIRKDNVDGDWKNFGSETSETEFKDIGTDIRNRNLAYDMIQFETPQLDAFLEIAFLFEKEEVLILTVLPEGEFNLETLNQGLLRYPSEIKESVYAVERITSEYLLDQRSCLFEDDFAQDQKLLHQLNFPFLEVDEMVLEILAFLSLQDELFFILKNTESSHRIQDDNLLVNNEEYLCSMKYDVEEFLSDHFLRPCAVSELASHVSSGGSDLMSMMETLEIPVSSGVQTKSSCDWLVGPAIFEEFQLLDIYSNRPFEVFFDLELSAVSEISDCMTIENTNFKSFNELIVCHELALVDDTFKSLPVPILSSQGPERSLYAFIEDVLANLNGQSLSASDSIYLDWLLLEENSCSSGIYSSYQNMLEEINLKPVEFDQEPCEKDSIFYRYVFSDDTLVRERTEDEVELKESLTDGISILPSQTINVASSKLLNDRCQQKGRQILAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKGESVFSAIDCNTMLPKVPCDGQLTNQPSMSTADVSMKQLNVALHQVCLSDNILDLINNSEKIYVAILQNETELRKTYLPYVAEDYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEKIMTLATLYATKQIAWYLCFYGIHPAHLYLKKLCQSLECLKSRLGFLVSLIEDAGRMVDREITLSHPALTTIQDILCSKTSTSTLKVLVVANQIFWWSLKTLFGSMGLSFEELNYESPTDRQVSNANIMVDNFVSNCLLVSQEHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKCGNCKAFCEAVDLPQHNELTIEEKSLVENQTRTLEKLLNFLPVAEKYILASPEATIEAEDGRVPLQVPVVPVLDKSQHIDLMSVPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDLSWPVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIENIATDVLTSLSFAFSGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTDEIILSCIENVSKLVARHLYPKMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEWPHERRLHAIKKYCIPDESVSLFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNSERKRRNFTGGTQCIDKNMDLLNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGLSSSVNHFFDQNHNLESFDATILMDPISVCKPRDSWISTAPEISDEIRRGCSSYVQNQGLDPNEKKLQNLHNMNKPENQHEELIGEVVNLIDNPVLKDDFATMTPMNFLPSMLDNEKDSSRKSKIQKRLSYGQSDHPFCAVDIANNSSSDFWSSINLHRQSSEGLDNHFPDPSFKPSIVPLRYKDDHSDEGFIQNSTRDSKVLFSLSEKDTSHSDVTPLSIALRSKHLQESSPWTMEFLNRVREKSRNRRHSVPRGSSSPFPEHLGNVKKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLAPTSELSSGTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKS
Homology
BLAST of Lcy02g000120.1 vs. ExPASy Swiss-Prot
Match:
F4KG50 (Protein SHORTAGE IN CHIASMATA 1 OS=Arabidopsis thaliana OX=3702 GN=SHOC1 PE=1 SV=1)
HSP 1 Score: 781.2 bits (2016), Expect = 2.4e-224
Identity = 616/1709 (36.04%), Postives = 894/1709 (52.31%), Query Frame = 0
Query: 1 MRTRFLDIDYFATGNE------SFHCLPLPHLTSKPLSTVG--DLLHFDFVPEISLGIDR 60
MRTRFL+IDYF+T F LP P P+ G D L F + +S+ I
Sbjct: 1 MRTRFLNIDYFSTPPSHVFETLGFLNLPAPDNFPAPIVYNGEEDRLRFGSIENVSIPIGN 60
Query: 61 LTIDSALSKFFDDVLPRRIDDDNDFRDARGQSSRFQGSTERFFSTESDETRFLEEEDKVI 120
L I++ALSKF DV+P R+ D+R S S ++S E D
Sbjct: 61 LPIEAALSKFLSDVVPDRV--SVDYRVFEIDDS----SLGVYYSDEKD------------ 120
Query: 121 RKDNVDGDWKNFGSETSETEFKDIGTDIRNRNLAYDMIQFETPQLDAFLEIAFLFEKEEV 180
DGD D T +I+ ETP+LD +E L E+
Sbjct: 121 -----DGD-----------AIADKATP--------KIIELETPELDFEMENKLLCTSEDH 180
Query: 181 LILTVLPEGEFNLETLNQG---LLRYPSEIKESVYAVERITSEYLLDQRSCLFEDD-FAQ 240
L N +G +L+ +I+E +Y+V+ I S+Y + + + E++ F +
Sbjct: 181 LQCFSEVLEIKNDPVKYEGSDIILQNSKDIQEQIYSVDYIPSDYFTENNTSVAENECFRK 240
Query: 241 DQKLLHQLNFPFLEVDEMVLEILAFLSLQDELFFILKNTESSHRIQDDNLLVNNEEYLCS 300
Q FP LEVDE+ L L+ LS+ D++F +L+ E +L++N++E + S
Sbjct: 241 IQPWFKDARFPLLEVDEVNLSELSSLSVLDKVFTVLETIEPQDTNAGSSLIINSKELIGS 300
Query: 301 MKYDVEEFLS-DHFLRPCAVSELASHVSSGGSDLMSMMETLEIPVSSGVQTKSSCDWLVG 360
YD+ + LS D +L S++ D++++ LEI + Q K +
Sbjct: 301 KDYDLLDVLSTDCYLNKSGQSDVVPEDEFSEMDIVTI---LEISNAEEFQGK-----VAV 360
Query: 361 PAIFEEFQLLDIYSNRPFEVFFDLELSAVSEISDCMTIENTNFKSFNELIVCHELALVDD 420
P +EEFQ+LD+ + F++F L+ + EI M + NFK F+EL+V ELA DD
Sbjct: 361 PVTYEEFQILDVDISDVFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAFTDD 420
Query: 421 TFKSLPVPILSSQGPERSLYAFIEDVLANLNGQSLSASDSIYLDWLLLEENSCSSGIYSS 480
FKSLP PIL RSL EDVL+ + QSLSAS+ IYL W LLEE + + Y
Sbjct: 421 AFKSLPTPILHDYEMTRSLELIYEDVLSKIKPQSLSASNDIYLPWNLLEERNHNHCDYP- 480
Query: 481 YQNMLEEINLKPVEFDQEPCEKDSIFYRYVFSDDTLVRERTEDEVELKESLTDGISILPS 540
EEI ++++ E E D Y ++FS+D E VE GIS L
Sbjct: 481 ----FEEIVTFNIDYNWEASEGDKWVYDFIFSEDAF----CEPLVEKCTEPFYGISNLDE 540
Query: 541 QTINVASSKLLNDRCQQKGRQILAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKG 600
S LL + Q+ G + A N +KA L +KS S +DL FF++ +K
Sbjct: 541 HAPVNTSHGLLENPFQKTGARDCAVDDNAKKATLLFKSMSAFDDLTFFMDPKKAVIEDNL 600
Query: 601 ESVFSAI-----DCNTMLPKVPC-DGQLTNQPSMSTADVSMKQLNVALHQVCLSDNILDL 660
ES A C ++ K C G + P K + LH V S+NI L
Sbjct: 601 ESRVEAAKTTNHKCMSIDSKASCRSGGMHPNP---------KTEEMILHSVRPSENIQAL 660
Query: 661 INNSEKIYVAILQNETELRKTYLPYVAEDYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEK 720
+ K Y+ ++++E+E ++ED ++S+ K KLIDCI+K + T ++K
Sbjct: 661 VGEFVKSYLTLVKDESE-------NLSEDKLKLLSISKGKLIDCIRKANVHKT-QLADDK 720
Query: 721 IMTLATLYATKQIAWYLCFYGIHPAHLYLKKLCQSLECLKSRLGFLVSLIEDAGRMVDRE 780
T A L A KQ+ WY+CF+GIH A++YL K+C+S +K L L S +E + + +
Sbjct: 721 TFTFALLLAIKQMTWYMCFFGIHVAYIYLNKVCRSSNPMKIGLHTLYSAVETEHKSDETD 780
Query: 781 ITLSHPALTTIQDILCSKTSTSTLKVLVVANQIFWWSLKTLFGSMGLSFEELNYESPTDR 840
IT SHP+L IQ IL S+ + K L++A ++FW SLK L SMGLS+ +LN SP+
Sbjct: 781 ITRSHPSLAVIQGILQSEFARGNSKALLLAEKVFWSSLKRLLMSMGLSYNDLNSPSPSGN 840
Query: 841 QVSNANIMVDNF--VSNCLLVSQEHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINM 900
+ + + F +S+CL++S E IS SFP FS+I+EYGG N S + S + SKL +
Sbjct: 841 RPNVHEAIELGFLPISDCLIISYEQISPSFPVENFSVIVEYGGPNASPRYS-FPSKLDSF 900
Query: 901 PHLHFVMLELDKCGNCKAFCEAVDLPQHNELTIEEKSLVENQTRTLEKLLNFLPVAEKYI 960
P HF+ +ELD C C V +P L + + VE +T LE++LNF+P+ +
Sbjct: 901 PSFHFIKVELDMPSACGQLCAGVTVPY--SLKMIKGDEVETKTGWLEEVLNFVPLEKVCY 960
Query: 961 LASPEATIEAEDGRVPLQVPVVPVLDKSQHIDLMSVPEAIVIVNTQKFEKEMIVSRRSSY 1020
S E T E+E + +P + +S ++++VNT+ +KEMI+SRRS+Y
Sbjct: 961 AGSSETTNESEF----ISMPQESERKRGIIEQGLSDQRSVIVVNTKTVDKEMIISRRSTY 1020
Query: 1021 QRILALEKEGVQVVERDLSWPVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIEN 1080
Q++LA+EKEGVQVVERD PVDL+++ VCL+WYD + K++ + SS I +
Sbjct: 1021 QKVLAMEKEGVQVVERDSDLPVDLMLSPAVCLLWYDSETVSKKSAATIGTSSSSLSWIGD 1080
Query: 1081 IATDVLTSLSFAFSGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTD 1140
IAT+VLTSLSF+FS C++VFEGE + L+ VM+SSD LYAAA SL I Q+FCS S++LTD
Sbjct: 1081 IATNVLTSLSFSFSTCIMVFEGEPAFLAAVMDSSDELYAAAGSLGISLQMFCSSSANLTD 1140
Query: 1141 EIILSCIENVSKLVARHLYPKMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEW 1200
EIIL CI++ KL H+ KM ESE+LAESFLT FPS+NPLTA ILSS L +F++
Sbjct: 1141 EIILKCIKSSVKLSKLHV--KMPESESLAESFLTKFPSVNPLTAQVILSSSGSLLEFMKL 1200
Query: 1201 PHERRLHAIKKYCIPDESVSLFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNS 1260
PH+ ++ +KY +P+ESV LFS++C+YG REDS+SVMTD SSSVSSG DS+ H + +S
Sbjct: 1201 PHKSKVERTQKYHVPEESVDLFSSVCRYGAREDSRSVMTDSSSSVSSGPDSDTHHVSVHS 1260
Query: 1261 ERKRRNFTGGTQCIDKNMDLLNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGL 1320
K++ + ID + DL++ F+P KS G +DS
Sbjct: 1261 GSKKKQYIAEKDEIDMD-DLVH------FSPSIEFADTQLKSSGDFQLDDS--------W 1320
Query: 1321 SSSVNHFFDQNHNLESFDATILMDPISVCKPRDSWISTAPEISDEIRRGCSS-------- 1380
SS + F + E DA P + P DSW S PE D+ SS
Sbjct: 1321 SSKDHEIFHFDPVTEFSDAP--FKPSGISHPNDSWPSKDPERFDKKSGPGSSSKDTFWEK 1380
Query: 1381 ----------------------------YVQNQGLDPNEKKLQNLHNMNKPENQHEELIG 1440
QN+G + NLH+ EN + G
Sbjct: 1381 DQPDFSVEDSLPGIPELEDWSFPVKDKFMSQNRGCKFPVMRDFNLHDNRNSENFIADYKG 1440
Query: 1441 EVVNLIDNPVLKDDFATMTPMNFLPSMLD--NEKDSSRKSKIQKRLSYGQSDHPFCAVDI 1500
EV++ D L++DF N ++ NE++ RKSK ++LS+ S P
Sbjct: 1441 EVIDRADK-YLEEDFPPSPGYNRFARIVSDVNEEELPRKSKSSRKLSFFGSLQPNFPKAA 1500
Query: 1501 ANNSSSDFWSSINLHRQSSEGLDNHFPDPSFKPSIVPLRYKDDHSDEGFIQNSTRDSKVL 1560
+SSS+ +++ + DN+ + + R + + +++ +++
Sbjct: 1501 DIDSSSERYAT-----EKDSKYDNNTSLRGYADNYPAKRQRTLLEEVLTRRSAVPTTELP 1560
Query: 1561 FSLSEKDTSHSDVTPLSIALRSKHLQESSPWTMEFLNRVREKSRNRR--HSVPRGSSSPF 1620
F ++ SH +PLS A+RS + +SSPWT++FLNRVRE+SR R+ S+P +S P
Sbjct: 1561 F---REEISHFGGSPLSNAIRSSNQVQSSPWTVDFLNRVRERSRARKQQQSLPSYASPPS 1593
Query: 1621 PEHLGNVKK-TVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLAPTSEL 1648
E GN+KK KR+SPSILEFFKY+GG+ K E+KRQK+S SS S KN S L
Sbjct: 1621 LETPGNIKKANTKRKSPSILEFFKYKGGN---KLQEEKRQKRSKNSSASPKNERF-YSPL 1593
BLAST of Lcy02g000120.1 vs. ExPASy Swiss-Prot
Match:
B9F1C0 (Protein SHORTAGE IN CHIASMATA 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SHOC1 PE=1 SV=1)
HSP 1 Score: 490.3 bits (1261), Expect = 8.3e-137
Identity = 526/1817 (28.95%), Postives = 812/1817 (44.69%), Query Frame = 0
Query: 1 MRTRFLDIDYFATGNE------------SFHCLPLPHLTSKPLSTVGDLLHF------DF 60
MRTRFL DYFA + SF LP+P L P HF D
Sbjct: 1 MRTRFLATDYFAPSSSSAAGKALALEFFSFPSLPVPALPPDP--------HFLPFTSADE 60
Query: 61 VPEISL---GIDRLTIDSALSKFFDDVLPRRID-------DD--NDFRDARGQSSRFQGS 120
+P ++ G+ L I SALS F V+P+ + D+ +DF RG G
Sbjct: 61 LPAATVADDGLGPLPIASALSDFLAAVIPQALPVPTVPAADEVLDDFLYDRG------GY 120
Query: 121 TERFFSTESDETRFLEEEDKVIRKDNVDGDWKNFGSETSETEFKDIGTDIRNRNLAYDMI 180
E F S E R + + + N + D K GS + E + + R +
Sbjct: 121 GEDFSSWEFGAFR-IPKASEGYGVINREKDEKGEGSRSDGLEI----SSVMKRWEQLKEL 180
Query: 181 QFETPQLDAFL----EIAFLFEKEE---VLILTVLPEGEFNLETLN---QGLLRYPSEIK 240
+FE ++D + +IA E+E V +L +P+ + +L+ ++ +RY S++
Sbjct: 181 RFEVVEVDLLMALQEDIASFGEEESGGGVTLLLRVPDMKIHLDFIDIETDIKIRYQSDLP 240
Query: 241 ESVYAVERI-TSEYLLDQRSCLFEDDFAQDQKLLHQLNFPFLEVDEMVLEILAFLSLQDE 300
ESVY VE++ + + S L ED + L H P LEV E+ L+ D
Sbjct: 241 ESVYQVEKVPVKDNDGNGHSSLREDCCLEIAALDHGAVIPRLEVSRNSWELDDCLTETDR 300
Query: 301 LFFILKNTESSHRIQDDNLLVNNEEYLCSMKYDVEEFLSDHFLRPC---AVSELASHVSS 360
Q + + + E+L S D+ F+ + PC V + A ++
Sbjct: 301 YGVFDNVVRHLDEAQIQHSVFKSTEFLRSTDMDMLTFVCED--APCHDIQVDKPAEIKAA 360
Query: 361 GGSDLMSMMETLEIPVSSG---VQTKSSCDWLVGPAIFEEFQLLDIYSNRPFEVFFDLEL 420
D++ + + + +S ++ +C L + EE Q++D S+ F++ E
Sbjct: 361 VEMDVVRINGNILLEKNSALYPLKPDGTCSDLPCSILLEEVQIIDFPSDNVFKMLVQSET 420
Query: 421 SAVSEISDCMTIENTNFKSFNELIVCHELALVDDTFKSLPVPILSSQGPERSLYAFIEDV 480
+ ++ + + + E +V ELALVDDTF+SLP PIL+ RS I+++
Sbjct: 421 NKMNISDEIFKDDFDPARRLYESMVSCELALVDDTFRSLPTPILNDDIAVRSRVPPIQEI 480
Query: 481 LANLNGQSLSASDSIYLDWLLLEENSCSSGIYSSYQNMLEEINLKPVEFD-QEPCEKDSI 540
L +L LSASD IYLDW LL E C+ I SY +M+EE + + Q C+ S+
Sbjct: 481 LCSLKPHPLSASDGIYLDWHLLLEGPCNREICCSYASMVEEAKTCHLSSELQRSCQSTSV 540
Query: 541 FYRYVFSDDTLVRERTEDEVELKESLTDGISILPSQTINVASSKLLNDRCQQKG---RQI 600
F F +D + +DE + + +P+ + +C+Q+G
Sbjct: 541 FVS-DFLEDFQRSPKLQDEDKHSD------IYVPAPLSHDPQKLEATQKCEQEGGTRNHS 600
Query: 601 LAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKGESVFSAIDCNTMLPKVPCDGQL 660
+ EK+ + S S DLNF+LN + S S +D VP
Sbjct: 601 SMKRPSPEKSSSFPELISHSGDLNFYLNVRSATKSGTNNENTSTLD-------VP----H 660
Query: 661 TNQPSMSTADVSMKQLNVALHQVCLSDNILDLINNSEKIYVAILQNETELRKTYLPYVAE 720
+ + ++S + + + +H V S+ I LI Y + LQ T R ++ ++
Sbjct: 661 SEEQALSLSTRAKVDKLIEIHPVSPSNLIQGLIEQIHASYTSALQESTYWRHSF----SD 720
Query: 721 DYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEK-IMTLATLYATKQIAWYLCFYGIHPAHL 780
+ L +S KQKL++ I +G+ N+ E K M L LYA KQ+A+YLCF+G+H AHL
Sbjct: 721 EQGLGIS--KQKLLELITGEGSEGSYNHCEHKDKMELIVLYALKQVAYYLCFFGLHAAHL 780
Query: 781 YLKKLCQSLECLKSRLGFLVSLIEDAGRMVDREITLSHPALTTIQDILCSKTSTSTLKVL 840
Y+ L +SLE RL ++ I +A R +R++ SHP+L+ I+ IL S K+L
Sbjct: 781 YISNLTRSLENTPERLKHILWSISEAQRKSERQLFESHPSLSCIETILRSNKQIDQ-KIL 840
Query: 841 VVANQIFWWSLKTLFGSMGLSFEELNYESPT------DRQVSNANIMVDNFVSNCLLVSQ 900
+VA++ FW L SM ++F E T ++ S A ++ + S+C+L+
Sbjct: 841 IVADRAFWLPLGQKLASMRMTFVEFGQNPATTFVDLVNKTNSTAWVLEELLKSDCILLDN 900
Query: 901 EHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKCGNCKAFCEAV 960
++I SFPF+KF IILEYGG N SS + + KL +P LHF+ +++D A E
Sbjct: 901 KNIPASFPFDKFGIILEYGGPNKSSTLLSLAPKLDGLPPLHFLYVKVDGKDFPAALVEDN 960
Query: 961 DLPQHNELTIE------EKSLVE--NQTRTLEKLLNFLPV-------------------- 1020
Q + T++ +K L E N+ R ++ LNF+P
Sbjct: 961 HKDQDLKSTLDKVLLTLQKDLQERMNKMRIVDS-LNFIPATNQLQGLQEKRSKHFAADAT 1020
Query: 1021 ----------------------AEKYILASPEATIEAEDGRVP-LQVPVVPVLDKSQH-- 1080
+ +LA + I+ P + VP ++KS
Sbjct: 1021 KELLPDDQPHRLQNLNKKNTFDSHNVVLADEQLHIQQTLSNKPVVNSQCVPTVEKSSSTS 1080
Query: 1081 ----------------IDL-------------MSVPEAIVIVNTQKFEKEMIVSRRSSYQ 1140
DL +SVP+ +++VNT K M+VSRRSSYQ
Sbjct: 1081 SVSANVLKDPQENQSTTDLPSCVKNDCIMPGRLSVPDVVIVVNTGNHGKTMLVSRRSSYQ 1140
Query: 1141 RILALEKEGVQVVERDLSWPVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIENI 1200
+ILALEK G+QVVERD+ PVDLI+++ VCL+WY+ + T++ +S + +ENI
Sbjct: 1141 QILALEKGGMQVVERDIDLPVDLILSAAVCLVWYETALFEANELTTSAETSGIKENVENI 1200
Query: 1201 ATDVLTSLSFAFSGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTDE 1260
AT++L S+SF+F+GC++VFEGE LS VM+SSD LY AAASL+++ QLF S++ TDE
Sbjct: 1201 ATNILMSVSFSFTGCIMVFEGEADFLSAVMDSSDSLYTAAASLDMNLQLFFSHTPRSTDE 1260
Query: 1261 IILSCIENVSKLVARHLYPKMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEWP 1320
IIL+CI NV+ L P + ESE+LAESFLT FPSINP++A+ +LSS L +FL WP
Sbjct: 1261 IILNCITNVTSCYKAPL-PDIPESESLAESFLTSFPSINPVSAYMLLSSGGSLVEFLSWP 1320
Query: 1321 HERRLHAIKKYCIPDESVSLFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNSE 1380
HERR+ A+ KY + + +SLF+ALCK+GE +S+SVMT+CSS S D +
Sbjct: 1321 HERRIQAVGKYLLSPKIISLFNALCKFGELGESRSVMTECSSVDS---DISSAFLQSPRK 1380
Query: 1381 RKRRNFTGGTQCIDKNMDLLNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGLS 1440
RK+R+ C LL +++LN PG E +E+F
Sbjct: 1381 RKQRSLQA---CAVPTNKLLFSDSLNQI-PG-------------DYAEHAEVFS-----P 1440
Query: 1441 SSVNHFFDQNHNLESFDATILMDPISVCKPRDSWISTAPEISDEIRRGCSSYVQNQ---- 1500
S + F D ++ + D S +R SY Q +
Sbjct: 1441 SKLRKFSDMDNTIPELPDVFTFDE-----------------SLNMRSEGFSYQQKKHDVD 1500
Query: 1501 GLDPNEKKLQNLHNMNKPENQ-HEELIGEVVNLIDNPVLKDDFATMTPMNFLPSMLDNEK 1560
+ N+ + N P NQ + G +V+ D P + +F P S +
Sbjct: 1501 AIPGNQVINDDFSNGLTPNNQAYNRRTGNMVDTFDLP-WQPEFGGTHPSK---STFHTSR 1560
Query: 1561 DSSRKSKIQKRLSYGQSDHPFCAVDIANNSSSDFWSSINLHRQSSEGL-DNHFPDPSFKP 1620
S ++ +P + N W+ +Q+ +GL D S+
Sbjct: 1561 PSCSRT----------HSNPVFSTAFEINDDPGEWNISGGTKQTWKGLAHGGTVDDSY-- 1620
Query: 1621 SIVPLRYKDDHSDEGFIQNSTRDSKVLFSLSEKDTSHSDVTPLSIALRSKHLQESSPWTM 1652
RY D+ + RD + S D S + S W +
Sbjct: 1621 -----RYDMDNR-----YHEPRDEIMQHPASSLAFQKLD-------FGSHATSQGSCWEI 1680
BLAST of Lcy02g000120.1 vs. ExPASy TrEMBL
Match:
A0A6J1I9N8 (protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111470528 PE=4 SV=1)
HSP 1 Score: 2688.3 bits (6967), Expect = 0.0e+00
Identity = 1381/1658 (83.29%), Postives = 1480/1658 (89.26%), Query Frame = 0
Query: 1 MRTRFLDIDYFATGNESFHCLPLPHLTSKPLSTVGDLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FA GNESFH LP+PHL S PLSTVGDLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNDFRDARGQSSRFQGSTERFFSTESDETRFLEEEDKVIRKDNVDGD 120
+FFDDVLPRRI+DD+ +RDA QSS F GS ER FS+ES TR EEE K +DN++G
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFKDIGTDIRNRNLAYDMIQFETPQLDAFLEIAFLFEKEEVLILTVLPE 180
WKNFGSETSE EFKDIGT+IRNRN + DMIQFETPQLDAFLE AFLFE+EEV ILT +PE
Sbjct: 121 WKNFGSETSEMEFKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAMPE 180
Query: 181 GEFNLETLNQGLLRYPSEIKESVYAVERITSEYLLDQRSCLFEDDFAQDQKLLHQLNFPF 240
EF+LETLNQGLL+YPSE+KES+Y VE I SEYLLDQ SCLFEDDFAQDQKL HQ FPF
Sbjct: 181 VEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTFPF 240
Query: 241 LEVDEMVLEILAFLSLQDELFFILKNTESSHRIQDDNLLVNNEEYLCSMKYDVEEFLSDH 300
LEVDEMVLE LAFLSLQDELFFIL+NTES+HRIQDDNLLVNNEEYL M+ D EEFLSDH
Sbjct: 241 LEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLSDH 300
Query: 301 FLRPCAVSELAS-HVSSGGSDLMSMMETLEIPVSSGVQTKSSCDWLVGPAIFEEFQLLDI 360
FLRPCAVSELAS +S G SDLMSMMETLEI VSS VQTKSSCD V PAIFEEFQLLD
Sbjct: 301 FLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLLDT 360
Query: 361 YSNRPFEVFFDLELSAVSEISDCMTIENTNFKSFNELIVCHELALVDDTFKSLPVPILSS 420
YSN+ F V FDLE+SA+SEI+DC +IENTNFKSFNELIVCHEL LVDD FKSLPVPILSS
Sbjct: 361 YSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPILSS 420
Query: 421 QGPERSLYAFIEDVLANLNGQSLSASDSIYLDWLLLEENSCSSGIYSSYQNMLEEINLKP 480
QG E+ L AFIEDVLANLN QSLSASD IYLDW LL+ +S SSG+YSSYQNMLEEINLKP
Sbjct: 421 QGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINLKP 480
Query: 481 VEFDQEPCEKDSIFYRYVFSDDTLVRERTEDEVELKESLTDGISILPSQTINVASSKLLN 540
VEFD+EPCE D IFYRYVFSDD LVRERTED+ ELKES +GI +L QTI+VAS KLLN
Sbjct: 481 VEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKLLN 540
Query: 541 DRCQQKGRQILAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKGESVFSAIDCNTM 600
+RCQQK RQ LAAV N+EKAL SWKSKSESNDL FFLNSQKPAG+RK ESVFSAID NT
Sbjct: 541 ERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTNTT 600
Query: 601 LPKVPCDGQLTNQPSMSTADVSMKQLNVALHQVCLSDNILDLINNSEKIYVAILQNETEL 660
LPKV DG LTN+PSMS+AD S+KQLNVA+HQVCLSDNIL LINNSEK Y+AILQNETEL
Sbjct: 601 LPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNETEL 660
Query: 661 RKTYLPYVAEDYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEKIMTLATLYATKQIAWYLC 720
RK YLPYVAEDY LM+SLPKQKLIDCIKKIYLQGT+ YWEEKIMTLATLYATKQI WYLC
Sbjct: 661 RKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWYLC 720
Query: 721 FYGIHPAHLYLKKLCQSLECLKSRLGFLVSLIEDAGRMVDREITLSHPALTTIQDILCSK 780
F+GIHPAHLYLKKLCQS ECLKSRLGFLVS IE+AG+MVD+EIT+SHPALTTIQ+ILCS+
Sbjct: 721 FFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILCSR 780
Query: 781 TSTSTLKVLVVANQIFWWSLKTLFGSMGLSFEELNYESPTDRQVSNANIMVDNFVSNCLL 840
TSTS+LKVLVVANQIFWWSLK L GS+G+SF E+NY S TD QVSNAN MVD+ SNCLL
Sbjct: 781 TSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNCLL 840
Query: 841 VSQEHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKCGNCKAFC 900
VSQE+ISGSFPFNKFSI+LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDKCGNCKAFC
Sbjct: 841 VSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKAFC 900
Query: 901 EAVDLPQHNELTIEEKSLVENQTRTLEKLLNFLPVAEKYILASPEATIEAEDGRVPLQVP 960
E VD PQHNELTIEEKSLVENQT LEKLLNFLPV EKYILAS + TIEAE+ RVPL+ P
Sbjct: 901 EGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLRAP 960
Query: 961 VVPVLDKSQHIDLMSVPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDLSW 1020
VVPV DKSQH DL+S PEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 VVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDLCL 1020
Query: 1021 PVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIENIATDVLTSLSFAFSGCVLVF 1080
PVDLII G+CL WYDCTNI K STSNEAS CLNLCIENIATDVLTSLSFAF GCVLVF
Sbjct: 1021 PVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVLVF 1080
Query: 1081 EGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTDEIILSCIENVSKLVARHLYP 1140
EGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSS+LTDEIIL CIENVSKL+ R +YP
Sbjct: 1081 EGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRIYP 1140
Query: 1141 KMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEWPHERRLHAIKKYCIPDESVS 1200
KMSESETLAESFLT FPSINPL AH ILSSES+LADFLEWPHERRLHAI+KY IPD+ +S
Sbjct: 1141 KMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDCIS 1200
Query: 1201 LFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNSERKRRNFTGGTQCIDKNMDL 1260
LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKCHFNGNSERKRRNFTGGTQCI+KN D
Sbjct: 1201 LFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNTDC 1260
Query: 1261 LNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGLSSSVNHFFDQNHNLESFDAT 1320
L +NTLN FT GT ETL ASKSFGSQ+FED EIFCDLKGLSSSVN+FFDQNHNL SFDAT
Sbjct: 1261 LYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFDAT 1320
Query: 1321 ILMDPISVCKPRDSWISTAPEISDEIRRGCSSYVQNQGLDPNEKKLQNLHNMNKPENQHE 1380
+ MDP VCKPRD WISTAPEISDEIRR CSS+VQNQGLD ++KK+ N HNMNK EN HE
Sbjct: 1321 VSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNKSENHHE 1380
Query: 1381 ELIGEVVNLIDNPVLKDDFATMTPMNFLPSMLDNEKDSSRKSKIQKRLSYGQSDHPFCAV 1440
ELI EV NLIDNPVLKD FATM PMNFLPSMLDNE DSSRKSKIQ+RLSYGQSDHPFCAV
Sbjct: 1381 ELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSDHPFCAV 1440
Query: 1441 DIANNSSSDFWSSINLHRQSSEGLDNHFPDPSFKPSIVPLRYKDDHSDEGFIQNSTRDSK 1500
D+ NNSSSDFWSSINLH QSS GLDN FPDPSF+PSI+PLRYKDDH DEG IQN RDSK
Sbjct: 1441 DVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQNPLRDSK 1500
Query: 1501 VLFSLSEKDTSHSDVTPLSIALRSKHLQESSPWTMEFLNRVREKSRNRRHSVPRGSSSPF 1560
V FSLSEKDTSHSDVTPLS+ALRSKHLQESSPWTMEFLNR+REKSRNR+HSVPRGSSSPF
Sbjct: 1501 VSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSSPF 1560
Query: 1561 PEHLGNVKKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLAPTSELS 1620
PE+LGNVKKTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVL T ELS
Sbjct: 1561 PENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRELS 1620
Query: 1621 SGTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKS 1658
SGTPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+
Sbjct: 1621 SGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKN 1658
BLAST of Lcy02g000120.1 vs. ExPASy TrEMBL
Match:
A0A6J1I842 (protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470528 PE=4 SV=1)
HSP 1 Score: 2683.3 bits (6954), Expect = 0.0e+00
Identity = 1381/1660 (83.19%), Postives = 1480/1660 (89.16%), Query Frame = 0
Query: 1 MRTRFLDIDYFATGNESFHCLPLPHLTSKPLSTVGDLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FA GNESFH LP+PHL S PLSTVGDLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNDFRDARGQSSRFQGSTERFFSTESDETRFLEEEDKVIRKDNVDGD 120
+FFDDVLPRRI+DD+ +RDA QSS F GS ER FS+ES TR EEE K +DN++G
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEF--KDIGTDIRNRNLAYDMIQFETPQLDAFLEIAFLFEKEEVLILTVL 180
WKNFGSETSE EF KDIGT+IRNRN + DMIQFETPQLDAFLE AFLFE+EEV ILT +
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAM 180
Query: 181 PEGEFNLETLNQGLLRYPSEIKESVYAVERITSEYLLDQRSCLFEDDFAQDQKLLHQLNF 240
PE EF+LETLNQGLL+YPSE+KES+Y VE I SEYLLDQ SCLFEDDFAQDQKL HQ F
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDEMVLEILAFLSLQDELFFILKNTESSHRIQDDNLLVNNEEYLCSMKYDVEEFLS 300
PFLEVDEMVLE LAFLSLQDELFFIL+NTES+HRIQDDNLLVNNEEYL M+ D EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLS 300
Query: 301 DHFLRPCAVSELAS-HVSSGGSDLMSMMETLEIPVSSGVQTKSSCDWLVGPAIFEEFQLL 360
DHFLRPCAVSELAS +S G SDLMSMMETLEI VSS VQTKSSCD V PAIFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYSNRPFEVFFDLELSAVSEISDCMTIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D YSN+ F V FDLE+SA+SEI+DC +IENTNFKSFNELIVCHEL LVDD FKSLPVPIL
Sbjct: 361 DTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPIL 420
Query: 421 SSQGPERSLYAFIEDVLANLNGQSLSASDSIYLDWLLLEENSCSSGIYSSYQNMLEEINL 480
SSQG E+ L AFIEDVLANLN QSLSASD IYLDW LL+ +S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCEKDSIFYRYVFSDDTLVRERTEDEVELKESLTDGISILPSQTINVASSKL 540
KPVEFD+EPCE D IFYRYVFSDD LVRERTED+ ELKES +GI +L QTI+VAS KL
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKL 540
Query: 541 LNDRCQQKGRQILAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKGESVFSAIDCN 600
LN+RCQQK RQ LAAV N+EKAL SWKSKSESNDL FFLNSQKPAG+RK ESVFSAID N
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTN 600
Query: 601 TMLPKVPCDGQLTNQPSMSTADVSMKQLNVALHQVCLSDNILDLINNSEKIYVAILQNET 660
T LPKV DG LTN+PSMS+AD S+KQLNVA+HQVCLSDNIL LINNSEK Y+AILQNET
Sbjct: 601 TTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEKIMTLATLYATKQIAWY 720
ELRK YLPYVAEDY LM+SLPKQKLIDCIKKIYLQGT+ YWEEKIMTLATLYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIHPAHLYLKKLCQSLECLKSRLGFLVSLIEDAGRMVDREITLSHPALTTIQDILC 780
LCF+GIHPAHLYLKKLCQS ECLKSRLGFLVS IE+AG+MVD+EIT+SHPALTTIQ+ILC
Sbjct: 721 LCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANQIFWWSLKTLFGSMGLSFEELNYESPTDRQVSNANIMVDNFVSNC 840
S+TSTS+LKVLVVANQIFWWSLK L GS+G+SF E+NY S TD QVSNAN MVD+ SNC
Sbjct: 781 SRTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKCGNCKA 900
LLVSQE+ISGSFPFNKFSI+LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDKCGNCKA
Sbjct: 841 LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEAVDLPQHNELTIEEKSLVENQTRTLEKLLNFLPVAEKYILASPEATIEAEDGRVPLQ 960
FCE VD PQHNELTIEEKSLVENQT LEKLLNFLPV EKYILAS + TIEAE+ RVPL+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLR 960
Query: 961 VPVVPVLDKSQHIDLMSVPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PVVPV DKSQH DL+S PEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 APVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDL 1020
Query: 1021 SWPVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIENIATDVLTSLSFAFSGCVL 1080
PVDLII G+CL WYDCTNI K STSNEAS CLNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTDEIILSCIENVSKLVARHL 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSS+LTDEIIL CIENVSKL+ R +
Sbjct: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRI 1140
Query: 1141 YPKMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEWPHERRLHAIKKYCIPDES 1200
YPKMSESETLAESFLT FPSINPL AH ILSSES+LADFLEWPHERRLHAI+KY IPD+
Sbjct: 1141 YPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDC 1200
Query: 1201 VSLFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNSERKRRNFTGGTQCIDKNM 1260
+SLFSALCKYGEREDSKSVMTDCSSS+SSG DSEKCHFNGNSERKRRNFTGGTQCI+KN
Sbjct: 1201 ISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNT 1260
Query: 1261 DLLNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGLSSSVNHFFDQNHNLESFD 1320
D L +NTLN FT GT ETL ASKSFGSQ+FED EIFCDLKGLSSSVN+FFDQNHNL SFD
Sbjct: 1261 DCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFD 1320
Query: 1321 ATILMDPISVCKPRDSWISTAPEISDEIRRGCSSYVQNQGLDPNEKKLQNLHNMNKPENQ 1380
AT+ MDP VCKPRD WISTAPEISDEIRR CSS+VQNQGLD ++KK+ N HNMNK EN
Sbjct: 1321 ATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNKSENH 1380
Query: 1381 HEELIGEVVNLIDNPVLKDDFATMTPMNFLPSMLDNEKDSSRKSKIQKRLSYGQSDHPFC 1440
HEELI EV NLIDNPVLKD FATM PMNFLPSMLDNE DSSRKSKIQ+RLSYGQSDHPFC
Sbjct: 1381 HEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSDHPFC 1440
Query: 1441 AVDIANNSSSDFWSSINLHRQSSEGLDNHFPDPSFKPSIVPLRYKDDHSDEGFIQNSTRD 1500
AVD+ NNSSSDFWSSINLH QSS GLDN FPDPSF+PSI+PLRYKDDH DEG IQN RD
Sbjct: 1441 AVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQNPLRD 1500
Query: 1501 SKVLFSLSEKDTSHSDVTPLSIALRSKHLQESSPWTMEFLNRVREKSRNRRHSVPRGSSS 1560
SKV FSLSEKDTSHSDVTPLS+ALRSKHLQESSPWTMEFLNR+REKSRNR+HSVPRGSSS
Sbjct: 1501 SKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
Query: 1561 PFPEHLGNVKKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLAPTSE 1620
PFPE+LGNVKKTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVL T E
Sbjct: 1561 PFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRE 1620
Query: 1621 LSSGTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKS 1658
LSSGTPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+
Sbjct: 1621 LSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKN 1660
BLAST of Lcy02g000120.1 vs. ExPASy TrEMBL
Match:
A0A6J1I320 (protein SHORTAGE IN CHIASMATA 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470528 PE=4 SV=1)
HSP 1 Score: 2677.5 bits (6939), Expect = 0.0e+00
Identity = 1381/1664 (82.99%), Postives = 1480/1664 (88.94%), Query Frame = 0
Query: 1 MRTRFLDIDYFATGNESFHCLPLPHLTSKPLSTVGDLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FA GNESFH LP+PHL S PLSTVGDLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNDFRDARGQSSRFQGSTERFFSTESDETRFLEEEDKVIRKDNVDGD 120
+FFDDVLPRRI+DD+ +RDA QSS F GS ER FS+ES TR EEE K +DN++G
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEF--KDIGTDIRNRNLAYDMIQFETPQLDAFLEIAFLFEKEEVLILTVL 180
WKNFGSETSE EF KDIGT+IRNRN + DMIQFETPQLDAFLE AFLFE+EEV ILT +
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAM 180
Query: 181 PEGEFNLETLNQGLLRYPSEIKESVYAVERITSEYLLDQRSCLFEDDFAQDQKLLHQLNF 240
PE EF+LETLNQGLL+YPSE+KES+Y VE I SEYLLDQ SCLFEDDFAQDQKL HQ F
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDEMVLEILAFLSLQDELFFILKNTESSHRIQDDNLLVNNEEYLCSMKYDVEEFLS 300
PFLEVDEMVLE LAFLSLQDELFFIL+NTES+HRIQDDNLLVNNEEYL M+ D EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLS 300
Query: 301 DHFLRPCAVSELAS-HVSSGGSDLMSMMETLEIPVSSGVQTKSSCDWLVGPAIFEEFQLL 360
DHFLRPCAVSELAS +S G SDLMSMMETLEI VSS VQTKSSCD V PAIFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYSNRPFEVFFDLELSAVSEISDCMTIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D YSN+ F V FDLE+SA+SEI+DC +IENTNFKSFNELIVCHEL LVDD FKSLPVPIL
Sbjct: 361 DTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPIL 420
Query: 421 SSQGPERSLYAFIEDVLANLNGQSLSASDSIYLDWLLLEENSCSSGIYSSYQNMLEEINL 480
SSQG E+ L AFIEDVLANLN QSLSASD IYLDW LL+ +S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCEKDSIFYRYVFSDDTLVRERTEDEVELKESLTDGISILPSQTINVASSKL 540
KPVEFD+EPCE D IFYRYVFSDD LVRERTED+ ELKES +GI +L QTI+VAS KL
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKL 540
Query: 541 LNDRCQQKGRQILAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKGESVFSAIDCN 600
LN+RCQQK RQ LAAV N+EKAL SWKSKSESNDL FFLNSQKPAG+RK ESVFSAID N
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTN 600
Query: 601 TMLPKVPCDGQLTNQPSMSTADVSMKQLNVALHQVCLSDNILDLINNSEKIYVAILQNET 660
T LPKV DG LTN+PSMS+AD S+KQLNVA+HQVCLSDNIL LINNSEK Y+AILQNET
Sbjct: 601 TTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEKIMTLATLYATKQIAWY 720
ELRK YLPYVAEDY LM+SLPKQKLIDCIKKIYLQGT+ YWEEKIMTLATLYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIHPAHLYLKKLCQSLECLKSRLGFLVSLIEDAGRMVDREITLSHPALTTIQDILC 780
LCF+GIHPAHLYLKKLCQS ECLKSRLGFLVS IE+AG+MVD+EIT+SHPALTTIQ+ILC
Sbjct: 721 LCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANQIFWWSLKTLFGSMGLSFEELNYESPTDRQVSNANIMVDNFVSNC 840
S+TSTS+LKVLVVANQIFWWSLK L GS+G+SF E+NY S TD QVSNAN MVD+ SNC
Sbjct: 781 SRTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKCGNCKA 900
LLVSQE+ISGSFPFNKFSI+LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDKCGNCKA
Sbjct: 841 LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEAVDLPQHNELTIEEKSLVENQTRTLEKLLNFLPVAEKYILASPEATIEAEDGRVPLQ 960
FCE VD PQHNELTIEEKSLVENQT LEKLLNFLPV EKYILAS + TIEAE+ RVPL+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLR 960
Query: 961 VPVVPVLDKSQHIDLMSVPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PVVPV DKSQH DL+S PEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 APVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDL 1020
Query: 1021 SWPVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIENIATDVLTSLSFAFSGCVL 1080
PVDLII G+CL WYDCTNI K STSNEAS CLNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 ----VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTDEIILSCIENVSKLV 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSS+LTDEIIL CIENVSKL+
Sbjct: 1081 ISFQVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLM 1140
Query: 1141 ARHLYPKMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEWPHERRLHAIKKYCI 1200
R +YPKMSESETLAESFLT FPSINPL AH ILSSES+LADFLEWPHERRLHAI+KY I
Sbjct: 1141 TRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSI 1200
Query: 1201 PDESVSLFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNSERKRRNFTGGTQCI 1260
PD+ +SLFSALCKYGEREDSKSVMTDCSSS+SSG DSEKCHFNGNSERKRRNFTGGTQCI
Sbjct: 1201 PDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCI 1260
Query: 1261 DKNMDLLNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGLSSSVNHFFDQNHNL 1320
+KN D L +NTLN FT GT ETL ASKSFGSQ+FED EIFCDLKGLSSSVN+FFDQNHNL
Sbjct: 1261 EKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNL 1320
Query: 1321 ESFDATILMDPISVCKPRDSWISTAPEISDEIRRGCSSYVQNQGLDPNEKKLQNLHNMNK 1380
SFDAT+ MDP VCKPRD WISTAPEISDEIRR CSS+VQNQGLD ++KK+ N HNMNK
Sbjct: 1321 ASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNK 1380
Query: 1381 PENQHEELIGEVVNLIDNPVLKDDFATMTPMNFLPSMLDNEKDSSRKSKIQKRLSYGQSD 1440
EN HEELI EV NLIDNPVLKD FATM PMNFLPSMLDNE DSSRKSKIQ+RLSYGQSD
Sbjct: 1381 SENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSD 1440
Query: 1441 HPFCAVDIANNSSSDFWSSINLHRQSSEGLDNHFPDPSFKPSIVPLRYKDDHSDEGFIQN 1500
HPFCAVD+ NNSSSDFWSSINLH QSS GLDN FPDPSF+PSI+PLRYKDDH DEG IQN
Sbjct: 1441 HPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQN 1500
Query: 1501 STRDSKVLFSLSEKDTSHSDVTPLSIALRSKHLQESSPWTMEFLNRVREKSRNRRHSVPR 1560
RDSKV FSLSEKDTSHSDVTPLS+ALRSKHLQESSPWTMEFLNR+REKSRNR+HSVPR
Sbjct: 1501 PLRDSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPR 1560
Query: 1561 GSSSPFPEHLGNVKKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLA 1620
GSSSPFPE+LGNVKKTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVL
Sbjct: 1561 GSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLV 1620
Query: 1621 PTSELSSGTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKS 1658
T ELSSGTPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+
Sbjct: 1621 ATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKN 1664
BLAST of Lcy02g000120.1 vs. ExPASy TrEMBL
Match:
A0A6J1GJU9 (protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111454972 PE=4 SV=1)
HSP 1 Score: 2666.0 bits (6909), Expect = 0.0e+00
Identity = 1371/1658 (82.69%), Postives = 1471/1658 (88.72%), Query Frame = 0
Query: 1 MRTRFLDIDYFATGNESFHCLPLPHLTSKPLSTVGDLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FA GNESFH LP+PHL S PLSTVGDLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNDFRDARGQSSRFQGSTERFFSTESDETRFLEEEDKVIRKDNVDGD 120
+FFDDVLPRRI DD+ +RDA QSS F GS ER FS+ES TR EEE K +DN++G
Sbjct: 61 RFFDDVLPRRIVDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFKDIGTDIRNRNLAYDMIQFETPQLDAFLEIAFLFEKEEVLILTVLPE 180
WKNFGSETSE EFKDIGT+IRNRN + DMIQFETPQLD FLE AFLFEKEEV ILT +PE
Sbjct: 121 WKNFGSETSEMEFKDIGTEIRNRNFSNDMIQFETPQLDTFLENAFLFEKEEVQILTAMPE 180
Query: 181 GEFNLETLNQGLLRYPSEIKESVYAVERITSEYLLDQRSCLFEDDFAQDQKLLHQLNFPF 240
EF+LETLNQGLL+YPSE+KES+Y VE I SEYLLDQ SCLFEDDFAQDQKL HQ FPF
Sbjct: 181 VEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTFPF 240
Query: 241 LEVDEMVLEILAFLSLQDELFFILKNTESSHRIQDDNLLVNNEEYLCSMKYDVEEFLSDH 300
LEVDEMVLE LAFLSLQDELFFIL++TES+H I DDNLLVNNEEYL SM+ D EEFLSDH
Sbjct: 241 LEVDEMVLETLAFLSLQDELFFILESTESAHMIHDDNLLVNNEEYLSSMRCDAEEFLSDH 300
Query: 301 FLRPCAVSELAS-HVSSGGSDLMSMMETLEIPVSSGVQTKSSCDWLVGPAIFEEFQLLDI 360
FLRPC VSELAS +S G SDLMSMMETLEI VSS VQTKSSCD V PAIFEEFQLLD
Sbjct: 301 FLRPCGVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLLDT 360
Query: 361 YSNRPFEVFFDLELSAVSEISDCMTIENTNFKSFNELIVCHELALVDDTFKSLPVPILSS 420
YSN+ F FDLE+SA+SEI+DC +IENTNFKSFNELIVCHEL LVDDTFKSLPVPILSS
Sbjct: 361 YSNQHFGAIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPILSS 420
Query: 421 QGPERSLYAFIEDVLANLNGQSLSASDSIYLDWLLLEENSCSSGIYSSYQNMLEEINLKP 480
QG E+ L AFIEDVLANLN QSLSASD IYLDW LL+E+S SSG+YSSYQNMLEEINLKP
Sbjct: 421 QGSEKLLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINLKP 480
Query: 481 VEFDQEPCEKDSIFYRYVFSDDTLVRERTEDEVELKESLTDGISILPSQTINVASSKLLN 540
VEFD+EPCE D IFYRYVFSDD LVRERTED+ ELKES +GI +L QTI+VASS LLN
Sbjct: 481 VEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSILLN 540
Query: 541 DRCQQKGRQILAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKGESVFSAIDCNTM 600
+RCQQK RQ LAAV N+EKAL SWKSKSESNDL FFLNSQKP G RK ESVFS ID NT
Sbjct: 541 ERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPVGVRKSESVFSEIDTNTT 600
Query: 601 LPKVPCDGQLTNQPSMSTADVSMKQLNVALHQVCLSDNILDLINNSEKIYVAILQNETEL 660
LPKVP DG LTN+PSMS+AD S+KQLNVA+HQVCLSDNIL LINNSEK Y+AILQNETEL
Sbjct: 601 LPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNETEL 660
Query: 661 RKTYLPYVAEDYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEKIMTLATLYATKQIAWYLC 720
RK YLPYVAEDY LM+SLPKQKLIDCIKKIYLQGT+ YWEEKIMTLATLYATKQI WYLC
Sbjct: 661 RKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWYLC 720
Query: 721 FYGIHPAHLYLKKLCQSLECLKSRLGFLVSLIEDAGRMVDREITLSHPALTTIQDILCSK 780
FYGIHPAHLYLKKLCQS ECLKSRLGFLVS IE+AG+MV REIT+SHPALTTIQ+ILCS+
Sbjct: 721 FYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILCSR 780
Query: 781 TSTSTLKVLVVANQIFWWSLKTLFGSMGLSFEELNYESPTDRQVSNANIMVDNFVSNCLL 840
TSTS+LKVLVVANQIFWWSL+ L GS+G+SF E+NY S T QVSNAN MVD+ SNCLL
Sbjct: 781 TSTSSLKVLVVANQIFWWSLEKLLGSLGISFAEINYGSLTVEQVSNANAMVDDLASNCLL 840
Query: 841 VSQEHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKCGNCKAFC 900
VSQE+ISGSFPFNKFSI+LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDKCGNCKAFC
Sbjct: 841 VSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKAFC 900
Query: 901 EAVDLPQHNELTIEEKSLVENQTRTLEKLLNFLPVAEKYILASPEATIEAEDGRVPLQVP 960
E VD PQHNELTIEEKSLVENQT LEKLLNFLPV EKYILASP+ TIEAE+ RVPL+ P
Sbjct: 901 EGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVPLRAP 960
Query: 961 VVPVLDKSQHIDLMSVPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDLSW 1020
V PV DKSQ+ DL+S PEAI+IVNTQKFEKEMIV RRSSY+RILALEKEGVQVVERDL
Sbjct: 961 VEPVSDKSQYTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYRRILALEKEGVQVVERDLCL 1020
Query: 1021 PVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIENIATDVLTSLSFAFSGCVLVF 1080
PVDLII G+CL WYDCTNI K STSNEAS CLNLCIENIATDVLTSLSFAF GCVLVF
Sbjct: 1021 PVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVLVF 1080
Query: 1081 EGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTDEIILSCIENVSKLVARHLYP 1140
EGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSS+LTDEIIL CIENVSKL+ R +YP
Sbjct: 1081 EGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRIYP 1140
Query: 1141 KMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEWPHERRLHAIKKYCIPDESVS 1200
KMSESETLAESFLT FPSINPL AH ILSSES+LADFLEWPHERRLHAI+KY IPD+ +S
Sbjct: 1141 KMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDCIS 1200
Query: 1201 LFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNSERKRRNFTGGTQCIDKNMDL 1260
LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKCHFNGNSERKRRNFTGGTQCI+KN D
Sbjct: 1201 LFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNTDC 1260
Query: 1261 LNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGLSSSVNHFFDQNHNLESFDAT 1320
L +NTLN FT GT ETL ASKSFGSQ+FED EIFCDLKGLSSSVN+FFDQNHNL SFDAT
Sbjct: 1261 LYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFDAT 1320
Query: 1321 ILMDPISVCKPRDSWISTAPEISDEIRRGCSSYVQNQGLDPNEKKLQNLHNMNKPENQHE 1380
+ MDP VCKPRD WISTAPEISDEIRR CS +VQNQGLD ++KK+ + HNMNK EN HE
Sbjct: 1321 VSMDPTRVCKPRDCWISTAPEISDEIRRHCSPFVQNQGLDRSKKKIHSFHNMNKSENHHE 1380
Query: 1381 ELIGEVVNLIDNPVLKDDFATMTPMNFLPSMLDNEKDSSRKSKIQKRLSYGQSDHPFCAV 1440
ELI EV NLIDNPVLKD FATM PMNFLPSML+NE DSSRKSKIQ+RLSYGQSDHPFCAV
Sbjct: 1381 ELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSDHPFCAV 1440
Query: 1441 DIANNSSSDFWSSINLHRQSSEGLDNHFPDPSFKPSIVPLRYKDDHSDEGFIQNSTRDSK 1500
D+ NNSSSDFWSSINLH QSS GLDN FPDPSF+PSI+PLRYKDDH DEG QN RDSK
Sbjct: 1441 DVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQNHLRDSK 1500
Query: 1501 VLFSLSEKDTSHSDVTPLSIALRSKHLQESSPWTMEFLNRVREKSRNRRHSVPRGSSSPF 1560
V FSLSEKDTSHSDVTPLS+ALRSKHLQESSPWTMEFLNR+REKSRNR+HSVPRGSSSPF
Sbjct: 1501 VSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSSPF 1560
Query: 1561 PEHLGNVKKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLAPTSELS 1620
PE+LGNVKKTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVL T ELS
Sbjct: 1561 PENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRELS 1620
Query: 1621 SGTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKS 1658
SGTPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+
Sbjct: 1621 SGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKN 1658
BLAST of Lcy02g000120.1 vs. ExPASy TrEMBL
Match:
A0A6J1GJP5 (protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454972 PE=4 SV=1)
HSP 1 Score: 2660.9 bits (6896), Expect = 0.0e+00
Identity = 1371/1660 (82.59%), Postives = 1471/1660 (88.61%), Query Frame = 0
Query: 1 MRTRFLDIDYFATGNESFHCLPLPHLTSKPLSTVGDLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FA GNESFH LP+PHL S PLSTVGDLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNDFRDARGQSSRFQGSTERFFSTESDETRFLEEEDKVIRKDNVDGD 120
+FFDDVLPRRI DD+ +RDA QSS F GS ER FS+ES TR EEE K +DN++G
Sbjct: 61 RFFDDVLPRRIVDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEF--KDIGTDIRNRNLAYDMIQFETPQLDAFLEIAFLFEKEEVLILTVL 180
WKNFGSETSE EF KDIGT+IRNRN + DMIQFETPQLD FLE AFLFEKEEV ILT +
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDTFLENAFLFEKEEVQILTAM 180
Query: 181 PEGEFNLETLNQGLLRYPSEIKESVYAVERITSEYLLDQRSCLFEDDFAQDQKLLHQLNF 240
PE EF+LETLNQGLL+YPSE+KES+Y VE I SEYLLDQ SCLFEDDFAQDQKL HQ F
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDEMVLEILAFLSLQDELFFILKNTESSHRIQDDNLLVNNEEYLCSMKYDVEEFLS 300
PFLEVDEMVLE LAFLSLQDELFFIL++TES+H I DDNLLVNNEEYL SM+ D EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILESTESAHMIHDDNLLVNNEEYLSSMRCDAEEFLS 300
Query: 301 DHFLRPCAVSELAS-HVSSGGSDLMSMMETLEIPVSSGVQTKSSCDWLVGPAIFEEFQLL 360
DHFLRPC VSELAS +S G SDLMSMMETLEI VSS VQTKSSCD V PAIFEEFQLL
Sbjct: 301 DHFLRPCGVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYSNRPFEVFFDLELSAVSEISDCMTIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D YSN+ F FDLE+SA+SEI+DC +IENTNFKSFNELIVCHEL LVDDTFKSLPVPIL
Sbjct: 361 DTYSNQHFGAIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPIL 420
Query: 421 SSQGPERSLYAFIEDVLANLNGQSLSASDSIYLDWLLLEENSCSSGIYSSYQNMLEEINL 480
SSQG E+ L AFIEDVLANLN QSLSASD IYLDW LL+E+S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKLLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCEKDSIFYRYVFSDDTLVRERTEDEVELKESLTDGISILPSQTINVASSKL 540
KPVEFD+EPCE D IFYRYVFSDD LVRERTED+ ELKES +GI +L QTI+VASS L
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSIL 540
Query: 541 LNDRCQQKGRQILAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKGESVFSAIDCN 600
LN+RCQQK RQ LAAV N+EKAL SWKSKSESNDL FFLNSQKP G RK ESVFS ID N
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPVGVRKSESVFSEIDTN 600
Query: 601 TMLPKVPCDGQLTNQPSMSTADVSMKQLNVALHQVCLSDNILDLINNSEKIYVAILQNET 660
T LPKVP DG LTN+PSMS+AD S+KQLNVA+HQVCLSDNIL LINNSEK Y+AILQNET
Sbjct: 601 TTLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEKIMTLATLYATKQIAWY 720
ELRK YLPYVAEDY LM+SLPKQKLIDCIKKIYLQGT+ YWEEKIMTLATLYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIHPAHLYLKKLCQSLECLKSRLGFLVSLIEDAGRMVDREITLSHPALTTIQDILC 780
LCFYGIHPAHLYLKKLCQS ECLKSRLGFLVS IE+AG+MV REIT+SHPALTTIQ+ILC
Sbjct: 721 LCFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANQIFWWSLKTLFGSMGLSFEELNYESPTDRQVSNANIMVDNFVSNC 840
S+TSTS+LKVLVVANQIFWWSL+ L GS+G+SF E+NY S T QVSNAN MVD+ SNC
Sbjct: 781 SRTSTSSLKVLVVANQIFWWSLEKLLGSLGISFAEINYGSLTVEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKCGNCKA 900
LLVSQE+ISGSFPFNKFSI+LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDKCGNCKA
Sbjct: 841 LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEAVDLPQHNELTIEEKSLVENQTRTLEKLLNFLPVAEKYILASPEATIEAEDGRVPLQ 960
FCE VD PQHNELTIEEKSLVENQT LEKLLNFLPV EKYILASP+ TIEAE+ RVPL+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVPLR 960
Query: 961 VPVVPVLDKSQHIDLMSVPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PV PV DKSQ+ DL+S PEAI+IVNTQKFEKEMIV RRSSY+RILALEKEGVQVVERDL
Sbjct: 961 APVEPVSDKSQYTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYRRILALEKEGVQVVERDL 1020
Query: 1021 SWPVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIENIATDVLTSLSFAFSGCVL 1080
PVDLII G+CL WYDCTNI K STSNEAS CLNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTDEIILSCIENVSKLVARHL 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSS+LTDEIIL CIENVSKL+ R +
Sbjct: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRI 1140
Query: 1141 YPKMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEWPHERRLHAIKKYCIPDES 1200
YPKMSESETLAESFLT FPSINPL AH ILSSES+LADFLEWPHERRLHAI+KY IPD+
Sbjct: 1141 YPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDC 1200
Query: 1201 VSLFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNSERKRRNFTGGTQCIDKNM 1260
+SLFSALCKYGEREDSKSVMTDCSSS+SSG DSEKCHFNGNSERKRRNFTGGTQCI+KN
Sbjct: 1201 ISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNT 1260
Query: 1261 DLLNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGLSSSVNHFFDQNHNLESFD 1320
D L +NTLN FT GT ETL ASKSFGSQ+FED EIFCDLKGLSSSVN+FFDQNHNL SFD
Sbjct: 1261 DCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFD 1320
Query: 1321 ATILMDPISVCKPRDSWISTAPEISDEIRRGCSSYVQNQGLDPNEKKLQNLHNMNKPENQ 1380
AT+ MDP VCKPRD WISTAPEISDEIRR CS +VQNQGLD ++KK+ + HNMNK EN
Sbjct: 1321 ATVSMDPTRVCKPRDCWISTAPEISDEIRRHCSPFVQNQGLDRSKKKIHSFHNMNKSENH 1380
Query: 1381 HEELIGEVVNLIDNPVLKDDFATMTPMNFLPSMLDNEKDSSRKSKIQKRLSYGQSDHPFC 1440
HEELI EV NLIDNPVLKD FATM PMNFLPSML+NE DSSRKSKIQ+RLSYGQSDHPFC
Sbjct: 1381 HEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSDHPFC 1440
Query: 1441 AVDIANNSSSDFWSSINLHRQSSEGLDNHFPDPSFKPSIVPLRYKDDHSDEGFIQNSTRD 1500
AVD+ NNSSSDFWSSINLH QSS GLDN FPDPSF+PSI+PLRYKDDH DEG QN RD
Sbjct: 1441 AVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQNHLRD 1500
Query: 1501 SKVLFSLSEKDTSHSDVTPLSIALRSKHLQESSPWTMEFLNRVREKSRNRRHSVPRGSSS 1560
SKV FSLSEKDTSHSDVTPLS+ALRSKHLQESSPWTMEFLNR+REKSRNR+HSVPRGSSS
Sbjct: 1501 SKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
Query: 1561 PFPEHLGNVKKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLAPTSE 1620
PFPE+LGNVKKTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVL T E
Sbjct: 1561 PFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRE 1620
Query: 1621 LSSGTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKS 1658
LSSGTPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+
Sbjct: 1621 LSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKN 1660
BLAST of Lcy02g000120.1 vs. NCBI nr
Match:
XP_022971834.1 (protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita maxima])
HSP 1 Score: 2688.3 bits (6967), Expect = 0.0e+00
Identity = 1381/1658 (83.29%), Postives = 1480/1658 (89.26%), Query Frame = 0
Query: 1 MRTRFLDIDYFATGNESFHCLPLPHLTSKPLSTVGDLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FA GNESFH LP+PHL S PLSTVGDLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNDFRDARGQSSRFQGSTERFFSTESDETRFLEEEDKVIRKDNVDGD 120
+FFDDVLPRRI+DD+ +RDA QSS F GS ER FS+ES TR EEE K +DN++G
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFKDIGTDIRNRNLAYDMIQFETPQLDAFLEIAFLFEKEEVLILTVLPE 180
WKNFGSETSE EFKDIGT+IRNRN + DMIQFETPQLDAFLE AFLFE+EEV ILT +PE
Sbjct: 121 WKNFGSETSEMEFKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAMPE 180
Query: 181 GEFNLETLNQGLLRYPSEIKESVYAVERITSEYLLDQRSCLFEDDFAQDQKLLHQLNFPF 240
EF+LETLNQGLL+YPSE+KES+Y VE I SEYLLDQ SCLFEDDFAQDQKL HQ FPF
Sbjct: 181 VEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTFPF 240
Query: 241 LEVDEMVLEILAFLSLQDELFFILKNTESSHRIQDDNLLVNNEEYLCSMKYDVEEFLSDH 300
LEVDEMVLE LAFLSLQDELFFIL+NTES+HRIQDDNLLVNNEEYL M+ D EEFLSDH
Sbjct: 241 LEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLSDH 300
Query: 301 FLRPCAVSELAS-HVSSGGSDLMSMMETLEIPVSSGVQTKSSCDWLVGPAIFEEFQLLDI 360
FLRPCAVSELAS +S G SDLMSMMETLEI VSS VQTKSSCD V PAIFEEFQLLD
Sbjct: 301 FLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLLDT 360
Query: 361 YSNRPFEVFFDLELSAVSEISDCMTIENTNFKSFNELIVCHELALVDDTFKSLPVPILSS 420
YSN+ F V FDLE+SA+SEI+DC +IENTNFKSFNELIVCHEL LVDD FKSLPVPILSS
Sbjct: 361 YSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPILSS 420
Query: 421 QGPERSLYAFIEDVLANLNGQSLSASDSIYLDWLLLEENSCSSGIYSSYQNMLEEINLKP 480
QG E+ L AFIEDVLANLN QSLSASD IYLDW LL+ +S SSG+YSSYQNMLEEINLKP
Sbjct: 421 QGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINLKP 480
Query: 481 VEFDQEPCEKDSIFYRYVFSDDTLVRERTEDEVELKESLTDGISILPSQTINVASSKLLN 540
VEFD+EPCE D IFYRYVFSDD LVRERTED+ ELKES +GI +L QTI+VAS KLLN
Sbjct: 481 VEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKLLN 540
Query: 541 DRCQQKGRQILAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKGESVFSAIDCNTM 600
+RCQQK RQ LAAV N+EKAL SWKSKSESNDL FFLNSQKPAG+RK ESVFSAID NT
Sbjct: 541 ERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTNTT 600
Query: 601 LPKVPCDGQLTNQPSMSTADVSMKQLNVALHQVCLSDNILDLINNSEKIYVAILQNETEL 660
LPKV DG LTN+PSMS+AD S+KQLNVA+HQVCLSDNIL LINNSEK Y+AILQNETEL
Sbjct: 601 LPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNETEL 660
Query: 661 RKTYLPYVAEDYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEKIMTLATLYATKQIAWYLC 720
RK YLPYVAEDY LM+SLPKQKLIDCIKKIYLQGT+ YWEEKIMTLATLYATKQI WYLC
Sbjct: 661 RKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWYLC 720
Query: 721 FYGIHPAHLYLKKLCQSLECLKSRLGFLVSLIEDAGRMVDREITLSHPALTTIQDILCSK 780
F+GIHPAHLYLKKLCQS ECLKSRLGFLVS IE+AG+MVD+EIT+SHPALTTIQ+ILCS+
Sbjct: 721 FFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILCSR 780
Query: 781 TSTSTLKVLVVANQIFWWSLKTLFGSMGLSFEELNYESPTDRQVSNANIMVDNFVSNCLL 840
TSTS+LKVLVVANQIFWWSLK L GS+G+SF E+NY S TD QVSNAN MVD+ SNCLL
Sbjct: 781 TSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNCLL 840
Query: 841 VSQEHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKCGNCKAFC 900
VSQE+ISGSFPFNKFSI+LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDKCGNCKAFC
Sbjct: 841 VSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKAFC 900
Query: 901 EAVDLPQHNELTIEEKSLVENQTRTLEKLLNFLPVAEKYILASPEATIEAEDGRVPLQVP 960
E VD PQHNELTIEEKSLVENQT LEKLLNFLPV EKYILAS + TIEAE+ RVPL+ P
Sbjct: 901 EGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLRAP 960
Query: 961 VVPVLDKSQHIDLMSVPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDLSW 1020
VVPV DKSQH DL+S PEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 VVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDLCL 1020
Query: 1021 PVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIENIATDVLTSLSFAFSGCVLVF 1080
PVDLII G+CL WYDCTNI K STSNEAS CLNLCIENIATDVLTSLSFAF GCVLVF
Sbjct: 1021 PVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVLVF 1080
Query: 1081 EGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTDEIILSCIENVSKLVARHLYP 1140
EGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSS+LTDEIIL CIENVSKL+ R +YP
Sbjct: 1081 EGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRIYP 1140
Query: 1141 KMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEWPHERRLHAIKKYCIPDESVS 1200
KMSESETLAESFLT FPSINPL AH ILSSES+LADFLEWPHERRLHAI+KY IPD+ +S
Sbjct: 1141 KMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDCIS 1200
Query: 1201 LFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNSERKRRNFTGGTQCIDKNMDL 1260
LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKCHFNGNSERKRRNFTGGTQCI+KN D
Sbjct: 1201 LFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNTDC 1260
Query: 1261 LNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGLSSSVNHFFDQNHNLESFDAT 1320
L +NTLN FT GT ETL ASKSFGSQ+FED EIFCDLKGLSSSVN+FFDQNHNL SFDAT
Sbjct: 1261 LYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFDAT 1320
Query: 1321 ILMDPISVCKPRDSWISTAPEISDEIRRGCSSYVQNQGLDPNEKKLQNLHNMNKPENQHE 1380
+ MDP VCKPRD WISTAPEISDEIRR CSS+VQNQGLD ++KK+ N HNMNK EN HE
Sbjct: 1321 VSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNKSENHHE 1380
Query: 1381 ELIGEVVNLIDNPVLKDDFATMTPMNFLPSMLDNEKDSSRKSKIQKRLSYGQSDHPFCAV 1440
ELI EV NLIDNPVLKD FATM PMNFLPSMLDNE DSSRKSKIQ+RLSYGQSDHPFCAV
Sbjct: 1381 ELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSDHPFCAV 1440
Query: 1441 DIANNSSSDFWSSINLHRQSSEGLDNHFPDPSFKPSIVPLRYKDDHSDEGFIQNSTRDSK 1500
D+ NNSSSDFWSSINLH QSS GLDN FPDPSF+PSI+PLRYKDDH DEG IQN RDSK
Sbjct: 1441 DVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQNPLRDSK 1500
Query: 1501 VLFSLSEKDTSHSDVTPLSIALRSKHLQESSPWTMEFLNRVREKSRNRRHSVPRGSSSPF 1560
V FSLSEKDTSHSDVTPLS+ALRSKHLQESSPWTMEFLNR+REKSRNR+HSVPRGSSSPF
Sbjct: 1501 VSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSSPF 1560
Query: 1561 PEHLGNVKKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLAPTSELS 1620
PE+LGNVKKTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVL T ELS
Sbjct: 1561 PENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRELS 1620
Query: 1621 SGTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKS 1658
SGTPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+
Sbjct: 1621 SGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKN 1658
BLAST of Lcy02g000120.1 vs. NCBI nr
Match:
XP_022971833.1 (protein SHORTAGE IN CHIASMATA 1 isoform X2 [Cucurbita maxima])
HSP 1 Score: 2683.3 bits (6954), Expect = 0.0e+00
Identity = 1381/1660 (83.19%), Postives = 1480/1660 (89.16%), Query Frame = 0
Query: 1 MRTRFLDIDYFATGNESFHCLPLPHLTSKPLSTVGDLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FA GNESFH LP+PHL S PLSTVGDLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNDFRDARGQSSRFQGSTERFFSTESDETRFLEEEDKVIRKDNVDGD 120
+FFDDVLPRRI+DD+ +RDA QSS F GS ER FS+ES TR EEE K +DN++G
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEF--KDIGTDIRNRNLAYDMIQFETPQLDAFLEIAFLFEKEEVLILTVL 180
WKNFGSETSE EF KDIGT+IRNRN + DMIQFETPQLDAFLE AFLFE+EEV ILT +
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAM 180
Query: 181 PEGEFNLETLNQGLLRYPSEIKESVYAVERITSEYLLDQRSCLFEDDFAQDQKLLHQLNF 240
PE EF+LETLNQGLL+YPSE+KES+Y VE I SEYLLDQ SCLFEDDFAQDQKL HQ F
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDEMVLEILAFLSLQDELFFILKNTESSHRIQDDNLLVNNEEYLCSMKYDVEEFLS 300
PFLEVDEMVLE LAFLSLQDELFFIL+NTES+HRIQDDNLLVNNEEYL M+ D EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLS 300
Query: 301 DHFLRPCAVSELAS-HVSSGGSDLMSMMETLEIPVSSGVQTKSSCDWLVGPAIFEEFQLL 360
DHFLRPCAVSELAS +S G SDLMSMMETLEI VSS VQTKSSCD V PAIFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYSNRPFEVFFDLELSAVSEISDCMTIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D YSN+ F V FDLE+SA+SEI+DC +IENTNFKSFNELIVCHEL LVDD FKSLPVPIL
Sbjct: 361 DTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPIL 420
Query: 421 SSQGPERSLYAFIEDVLANLNGQSLSASDSIYLDWLLLEENSCSSGIYSSYQNMLEEINL 480
SSQG E+ L AFIEDVLANLN QSLSASD IYLDW LL+ +S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCEKDSIFYRYVFSDDTLVRERTEDEVELKESLTDGISILPSQTINVASSKL 540
KPVEFD+EPCE D IFYRYVFSDD LVRERTED+ ELKES +GI +L QTI+VAS KL
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKL 540
Query: 541 LNDRCQQKGRQILAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKGESVFSAIDCN 600
LN+RCQQK RQ LAAV N+EKAL SWKSKSESNDL FFLNSQKPAG+RK ESVFSAID N
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTN 600
Query: 601 TMLPKVPCDGQLTNQPSMSTADVSMKQLNVALHQVCLSDNILDLINNSEKIYVAILQNET 660
T LPKV DG LTN+PSMS+AD S+KQLNVA+HQVCLSDNIL LINNSEK Y+AILQNET
Sbjct: 601 TTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEKIMTLATLYATKQIAWY 720
ELRK YLPYVAEDY LM+SLPKQKLIDCIKKIYLQGT+ YWEEKIMTLATLYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIHPAHLYLKKLCQSLECLKSRLGFLVSLIEDAGRMVDREITLSHPALTTIQDILC 780
LCF+GIHPAHLYLKKLCQS ECLKSRLGFLVS IE+AG+MVD+EIT+SHPALTTIQ+ILC
Sbjct: 721 LCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANQIFWWSLKTLFGSMGLSFEELNYESPTDRQVSNANIMVDNFVSNC 840
S+TSTS+LKVLVVANQIFWWSLK L GS+G+SF E+NY S TD QVSNAN MVD+ SNC
Sbjct: 781 SRTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKCGNCKA 900
LLVSQE+ISGSFPFNKFSI+LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDKCGNCKA
Sbjct: 841 LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEAVDLPQHNELTIEEKSLVENQTRTLEKLLNFLPVAEKYILASPEATIEAEDGRVPLQ 960
FCE VD PQHNELTIEEKSLVENQT LEKLLNFLPV EKYILAS + TIEAE+ RVPL+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLR 960
Query: 961 VPVVPVLDKSQHIDLMSVPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PVVPV DKSQH DL+S PEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 APVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDL 1020
Query: 1021 SWPVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIENIATDVLTSLSFAFSGCVL 1080
PVDLII G+CL WYDCTNI K STSNEAS CLNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTDEIILSCIENVSKLVARHL 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSS+LTDEIIL CIENVSKL+ R +
Sbjct: 1081 VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRI 1140
Query: 1141 YPKMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEWPHERRLHAIKKYCIPDES 1200
YPKMSESETLAESFLT FPSINPL AH ILSSES+LADFLEWPHERRLHAI+KY IPD+
Sbjct: 1141 YPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDC 1200
Query: 1201 VSLFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNSERKRRNFTGGTQCIDKNM 1260
+SLFSALCKYGEREDSKSVMTDCSSS+SSG DSEKCHFNGNSERKRRNFTGGTQCI+KN
Sbjct: 1201 ISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNT 1260
Query: 1261 DLLNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGLSSSVNHFFDQNHNLESFD 1320
D L +NTLN FT GT ETL ASKSFGSQ+FED EIFCDLKGLSSSVN+FFDQNHNL SFD
Sbjct: 1261 DCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFD 1320
Query: 1321 ATILMDPISVCKPRDSWISTAPEISDEIRRGCSSYVQNQGLDPNEKKLQNLHNMNKPENQ 1380
AT+ MDP VCKPRD WISTAPEISDEIRR CSS+VQNQGLD ++KK+ N HNMNK EN
Sbjct: 1321 ATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNKSENH 1380
Query: 1381 HEELIGEVVNLIDNPVLKDDFATMTPMNFLPSMLDNEKDSSRKSKIQKRLSYGQSDHPFC 1440
HEELI EV NLIDNPVLKD FATM PMNFLPSMLDNE DSSRKSKIQ+RLSYGQSDHPFC
Sbjct: 1381 HEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSDHPFC 1440
Query: 1441 AVDIANNSSSDFWSSINLHRQSSEGLDNHFPDPSFKPSIVPLRYKDDHSDEGFIQNSTRD 1500
AVD+ NNSSSDFWSSINLH QSS GLDN FPDPSF+PSI+PLRYKDDH DEG IQN RD
Sbjct: 1441 AVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQNPLRD 1500
Query: 1501 SKVLFSLSEKDTSHSDVTPLSIALRSKHLQESSPWTMEFLNRVREKSRNRRHSVPRGSSS 1560
SKV FSLSEKDTSHSDVTPLS+ALRSKHLQESSPWTMEFLNR+REKSRNR+HSVPRGSSS
Sbjct: 1501 SKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSS 1560
Query: 1561 PFPEHLGNVKKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLAPTSE 1620
PFPE+LGNVKKTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVL T E
Sbjct: 1561 PFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRE 1620
Query: 1621 LSSGTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKS 1658
LSSGTPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+
Sbjct: 1621 LSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKN 1660
BLAST of Lcy02g000120.1 vs. NCBI nr
Match:
XP_022971832.1 (protein SHORTAGE IN CHIASMATA 1 isoform X1 [Cucurbita maxima])
HSP 1 Score: 2677.5 bits (6939), Expect = 0.0e+00
Identity = 1381/1664 (82.99%), Postives = 1480/1664 (88.94%), Query Frame = 0
Query: 1 MRTRFLDIDYFATGNESFHCLPLPHLTSKPLSTVGDLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FA GNESFH LP+PHL S PLSTVGDLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNDFRDARGQSSRFQGSTERFFSTESDETRFLEEEDKVIRKDNVDGD 120
+FFDDVLPRRI+DD+ +RDA QSS F GS ER FS+ES TR EEE K +DN++G
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEF--KDIGTDIRNRNLAYDMIQFETPQLDAFLEIAFLFEKEEVLILTVL 180
WKNFGSETSE EF KDIGT+IRNRN + DMIQFETPQLDAFLE AFLFE+EEV ILT +
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAM 180
Query: 181 PEGEFNLETLNQGLLRYPSEIKESVYAVERITSEYLLDQRSCLFEDDFAQDQKLLHQLNF 240
PE EF+LETLNQGLL+YPSE+KES+Y VE I SEYLLDQ SCLFEDDFAQDQKL HQ F
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDEMVLEILAFLSLQDELFFILKNTESSHRIQDDNLLVNNEEYLCSMKYDVEEFLS 300
PFLEVDEMVLE LAFLSLQDELFFIL+NTES+HRIQDDNLLVNNEEYL M+ D EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLS 300
Query: 301 DHFLRPCAVSELAS-HVSSGGSDLMSMMETLEIPVSSGVQTKSSCDWLVGPAIFEEFQLL 360
DHFLRPCAVSELAS +S G SDLMSMMETLEI VSS VQTKSSCD V PAIFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYSNRPFEVFFDLELSAVSEISDCMTIENTNFKSFNELIVCHELALVDDTFKSLPVPIL 420
D YSN+ F V FDLE+SA+SEI+DC +IENTNFKSFNELIVCHEL LVDD FKSLPVPIL
Sbjct: 361 DTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPIL 420
Query: 421 SSQGPERSLYAFIEDVLANLNGQSLSASDSIYLDWLLLEENSCSSGIYSSYQNMLEEINL 480
SSQG E+ L AFIEDVLANLN QSLSASD IYLDW LL+ +S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINL 480
Query: 481 KPVEFDQEPCEKDSIFYRYVFSDDTLVRERTEDEVELKESLTDGISILPSQTINVASSKL 540
KPVEFD+EPCE D IFYRYVFSDD LVRERTED+ ELKES +GI +L QTI+VAS KL
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKL 540
Query: 541 LNDRCQQKGRQILAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKGESVFSAIDCN 600
LN+RCQQK RQ LAAV N+EKAL SWKSKSESNDL FFLNSQKPAG+RK ESVFSAID N
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTN 600
Query: 601 TMLPKVPCDGQLTNQPSMSTADVSMKQLNVALHQVCLSDNILDLINNSEKIYVAILQNET 660
T LPKV DG LTN+PSMS+AD S+KQLNVA+HQVCLSDNIL LINNSEK Y+AILQNET
Sbjct: 601 TTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPYVAEDYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEKIMTLATLYATKQIAWY 720
ELRK YLPYVAEDY LM+SLPKQKLIDCIKKIYLQGT+ YWEEKIMTLATLYATKQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIHPAHLYLKKLCQSLECLKSRLGFLVSLIEDAGRMVDREITLSHPALTTIQDILC 780
LCF+GIHPAHLYLKKLCQS ECLKSRLGFLVS IE+AG+MVD+EIT+SHPALTTIQ+ILC
Sbjct: 721 LCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILC 780
Query: 781 SKTSTSTLKVLVVANQIFWWSLKTLFGSMGLSFEELNYESPTDRQVSNANIMVDNFVSNC 840
S+TSTS+LKVLVVANQIFWWSLK L GS+G+SF E+NY S TD QVSNAN MVD+ SNC
Sbjct: 781 SRTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDDLASNC 840
Query: 841 LLVSQEHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKCGNCKA 900
LLVSQE+ISGSFPFNKFSI+LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDKCGNCKA
Sbjct: 841 LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA 900
Query: 901 FCEAVDLPQHNELTIEEKSLVENQTRTLEKLLNFLPVAEKYILASPEATIEAEDGRVPLQ 960
FCE VD PQHNELTIEEKSLVENQT LEKLLNFLPV EKYILAS + TIEAE+ RVPL+
Sbjct: 901 FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENRRVPLR 960
Query: 961 VPVVPVLDKSQHIDLMSVPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDL 1020
PVVPV DKSQH DL+S PEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 APVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDL 1020
Query: 1021 SWPVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIENIATDVLTSLSFAFSGCVL 1080
PVDLII G+CL WYDCTNI K STSNEAS CLNLCIENIATDVLTSLSFAF GCVL
Sbjct: 1021 CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL 1080
Query: 1081 ----VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTDEIILSCIENVSKLV 1140
VFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSS+LTDEIIL CIENVSKL+
Sbjct: 1081 ISFQVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLM 1140
Query: 1141 ARHLYPKMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEWPHERRLHAIKKYCI 1200
R +YPKMSESETLAESFLT FPSINPL AH ILSSES+LADFLEWPHERRLHAI+KY I
Sbjct: 1141 TRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSI 1200
Query: 1201 PDESVSLFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNSERKRRNFTGGTQCI 1260
PD+ +SLFSALCKYGEREDSKSVMTDCSSS+SSG DSEKCHFNGNSERKRRNFTGGTQCI
Sbjct: 1201 PDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCI 1260
Query: 1261 DKNMDLLNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGLSSSVNHFFDQNHNL 1320
+KN D L +NTLN FT GT ETL ASKSFGSQ+FED EIFCDLKGLSSSVN+FFDQNHNL
Sbjct: 1261 EKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNL 1320
Query: 1321 ESFDATILMDPISVCKPRDSWISTAPEISDEIRRGCSSYVQNQGLDPNEKKLQNLHNMNK 1380
SFDAT+ MDP VCKPRD WISTAPEISDEIRR CSS+VQNQGLD ++KK+ N HNMNK
Sbjct: 1321 ASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMNK 1380
Query: 1381 PENQHEELIGEVVNLIDNPVLKDDFATMTPMNFLPSMLDNEKDSSRKSKIQKRLSYGQSD 1440
EN HEELI EV NLIDNPVLKD FATM PMNFLPSMLDNE DSSRKSKIQ+RLSYGQSD
Sbjct: 1381 SENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQSD 1440
Query: 1441 HPFCAVDIANNSSSDFWSSINLHRQSSEGLDNHFPDPSFKPSIVPLRYKDDHSDEGFIQN 1500
HPFCAVD+ NNSSSDFWSSINLH QSS GLDN FPDPSF+PSI+PLRYKDDH DEG IQN
Sbjct: 1441 HPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQN 1500
Query: 1501 STRDSKVLFSLSEKDTSHSDVTPLSIALRSKHLQESSPWTMEFLNRVREKSRNRRHSVPR 1560
RDSKV FSLSEKDTSHSDVTPLS+ALRSKHLQESSPWTMEFLNR+REKSRNR+HSVPR
Sbjct: 1501 PLRDSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPR 1560
Query: 1561 GSSSPFPEHLGNVKKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLA 1620
GSSSPFPE+LGNVKKTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVL
Sbjct: 1561 GSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLV 1620
Query: 1621 PTSELSSGTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKS 1658
T ELSSGTPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+
Sbjct: 1621 ATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKN 1664
BLAST of Lcy02g000120.1 vs. NCBI nr
Match:
XP_022952237.1 (protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita moschata])
HSP 1 Score: 2666.0 bits (6909), Expect = 0.0e+00
Identity = 1371/1658 (82.69%), Postives = 1471/1658 (88.72%), Query Frame = 0
Query: 1 MRTRFLDIDYFATGNESFHCLPLPHLTSKPLSTVGDLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FA GNESFH LP+PHL S PLSTVGDLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNDFRDARGQSSRFQGSTERFFSTESDETRFLEEEDKVIRKDNVDGD 120
+FFDDVLPRRI DD+ +RDA QSS F GS ER FS+ES TR EEE K +DN++G
Sbjct: 61 RFFDDVLPRRIVDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFKDIGTDIRNRNLAYDMIQFETPQLDAFLEIAFLFEKEEVLILTVLPE 180
WKNFGSETSE EFKDIGT+IRNRN + DMIQFETPQLD FLE AFLFEKEEV ILT +PE
Sbjct: 121 WKNFGSETSEMEFKDIGTEIRNRNFSNDMIQFETPQLDTFLENAFLFEKEEVQILTAMPE 180
Query: 181 GEFNLETLNQGLLRYPSEIKESVYAVERITSEYLLDQRSCLFEDDFAQDQKLLHQLNFPF 240
EF+LETLNQGLL+YPSE+KES+Y VE I SEYLLDQ SCLFEDDFAQDQKL HQ FPF
Sbjct: 181 VEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTFPF 240
Query: 241 LEVDEMVLEILAFLSLQDELFFILKNTESSHRIQDDNLLVNNEEYLCSMKYDVEEFLSDH 300
LEVDEMVLE LAFLSLQDELFFIL++TES+H I DDNLLVNNEEYL SM+ D EEFLSDH
Sbjct: 241 LEVDEMVLETLAFLSLQDELFFILESTESAHMIHDDNLLVNNEEYLSSMRCDAEEFLSDH 300
Query: 301 FLRPCAVSELAS-HVSSGGSDLMSMMETLEIPVSSGVQTKSSCDWLVGPAIFEEFQLLDI 360
FLRPC VSELAS +S G SDLMSMMETLEI VSS VQTKSSCD V PAIFEEFQLLD
Sbjct: 301 FLRPCGVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLLDT 360
Query: 361 YSNRPFEVFFDLELSAVSEISDCMTIENTNFKSFNELIVCHELALVDDTFKSLPVPILSS 420
YSN+ F FDLE+SA+SEI+DC +IENTNFKSFNELIVCHEL LVDDTFKSLPVPILSS
Sbjct: 361 YSNQHFGAIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPILSS 420
Query: 421 QGPERSLYAFIEDVLANLNGQSLSASDSIYLDWLLLEENSCSSGIYSSYQNMLEEINLKP 480
QG E+ L AFIEDVLANLN QSLSASD IYLDW LL+E+S SSG+YSSYQNMLEEINLKP
Sbjct: 421 QGSEKLLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINLKP 480
Query: 481 VEFDQEPCEKDSIFYRYVFSDDTLVRERTEDEVELKESLTDGISILPSQTINVASSKLLN 540
VEFD+EPCE D IFYRYVFSDD LVRERTED+ ELKES +GI +L QTI+VASS LLN
Sbjct: 481 VEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSILLN 540
Query: 541 DRCQQKGRQILAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKGESVFSAIDCNTM 600
+RCQQK RQ LAAV N+EKAL SWKSKSESNDL FFLNSQKP G RK ESVFS ID NT
Sbjct: 541 ERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPVGVRKSESVFSEIDTNTT 600
Query: 601 LPKVPCDGQLTNQPSMSTADVSMKQLNVALHQVCLSDNILDLINNSEKIYVAILQNETEL 660
LPKVP DG LTN+PSMS+AD S+KQLNVA+HQVCLSDNIL LINNSEK Y+AILQNETEL
Sbjct: 601 LPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNETEL 660
Query: 661 RKTYLPYVAEDYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEKIMTLATLYATKQIAWYLC 720
RK YLPYVAEDY LM+SLPKQKLIDCIKKIYLQGT+ YWEEKIMTLATLYATKQI WYLC
Sbjct: 661 RKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWYLC 720
Query: 721 FYGIHPAHLYLKKLCQSLECLKSRLGFLVSLIEDAGRMVDREITLSHPALTTIQDILCSK 780
FYGIHPAHLYLKKLCQS ECLKSRLGFLVS IE+AG+MV REIT+SHPALTTIQ+ILCS+
Sbjct: 721 FYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILCSR 780
Query: 781 TSTSTLKVLVVANQIFWWSLKTLFGSMGLSFEELNYESPTDRQVSNANIMVDNFVSNCLL 840
TSTS+LKVLVVANQIFWWSL+ L GS+G+SF E+NY S T QVSNAN MVD+ SNCLL
Sbjct: 781 TSTSSLKVLVVANQIFWWSLEKLLGSLGISFAEINYGSLTVEQVSNANAMVDDLASNCLL 840
Query: 841 VSQEHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKCGNCKAFC 900
VSQE+ISGSFPFNKFSI+LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDKCGNCKAFC
Sbjct: 841 VSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKAFC 900
Query: 901 EAVDLPQHNELTIEEKSLVENQTRTLEKLLNFLPVAEKYILASPEATIEAEDGRVPLQVP 960
E VD PQHNELTIEEKSLVENQT LEKLLNFLPV EKYILASP+ TIEAE+ RVPL+ P
Sbjct: 901 EGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVPLRAP 960
Query: 961 VVPVLDKSQHIDLMSVPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDLSW 1020
V PV DKSQ+ DL+S PEAI+IVNTQKFEKEMIV RRSSY+RILALEKEGVQVVERDL
Sbjct: 961 VEPVSDKSQYTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYRRILALEKEGVQVVERDLCL 1020
Query: 1021 PVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIENIATDVLTSLSFAFSGCVLVF 1080
PVDLII G+CL WYDCTNI K STSNEAS CLNLCIENIATDVLTSLSFAF GCVLVF
Sbjct: 1021 PVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVLVF 1080
Query: 1081 EGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTDEIILSCIENVSKLVARHLYP 1140
EGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSS+LTDEIIL CIENVSKL+ R +YP
Sbjct: 1081 EGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRIYP 1140
Query: 1141 KMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEWPHERRLHAIKKYCIPDESVS 1200
KMSESETLAESFLT FPSINPL AH ILSSES+LADFLEWPHERRLHAI+KY IPD+ +S
Sbjct: 1141 KMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDCIS 1200
Query: 1201 LFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNSERKRRNFTGGTQCIDKNMDL 1260
LFSALCKYGEREDSKSVMTDCSSS+SSG DSEKCHFNGNSERKRRNFTGGTQCI+KN D
Sbjct: 1201 LFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCIEKNTDC 1260
Query: 1261 LNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGLSSSVNHFFDQNHNLESFDAT 1320
L +NTLN FT GT ETL ASKSFGSQ+FED EIFCDLKGLSSSVN+FFDQNHNL SFDAT
Sbjct: 1261 LYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFDAT 1320
Query: 1321 ILMDPISVCKPRDSWISTAPEISDEIRRGCSSYVQNQGLDPNEKKLQNLHNMNKPENQHE 1380
+ MDP VCKPRD WISTAPEISDEIRR CS +VQNQGLD ++KK+ + HNMNK EN HE
Sbjct: 1321 VSMDPTRVCKPRDCWISTAPEISDEIRRHCSPFVQNQGLDRSKKKIHSFHNMNKSENHHE 1380
Query: 1381 ELIGEVVNLIDNPVLKDDFATMTPMNFLPSMLDNEKDSSRKSKIQKRLSYGQSDHPFCAV 1440
ELI EV NLIDNPVLKD FATM PMNFLPSML+NE DSSRKSKIQ+RLSYGQSDHPFCAV
Sbjct: 1381 ELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSDHPFCAV 1440
Query: 1441 DIANNSSSDFWSSINLHRQSSEGLDNHFPDPSFKPSIVPLRYKDDHSDEGFIQNSTRDSK 1500
D+ NNSSSDFWSSINLH QSS GLDN FPDPSF+PSI+PLRYKDDH DEG QN RDSK
Sbjct: 1441 DVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQNHLRDSK 1500
Query: 1501 VLFSLSEKDTSHSDVTPLSIALRSKHLQESSPWTMEFLNRVREKSRNRRHSVPRGSSSPF 1560
V FSLSEKDTSHSDVTPLS+ALRSKHLQESSPWTMEFLNR+REKSRNR+HSVPRGSSSPF
Sbjct: 1501 VSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSSPF 1560
Query: 1561 PEHLGNVKKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLAPTSELS 1620
PE+LGNVKKTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVL T ELS
Sbjct: 1561 PENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATRELS 1620
Query: 1621 SGTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKS 1658
SGTPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+
Sbjct: 1621 SGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKN 1658
BLAST of Lcy02g000120.1 vs. NCBI nr
Match:
XP_023554172.1 (protein SHORTAGE IN CHIASMATA 1 isoform X4 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2665.6 bits (6908), Expect = 0.0e+00
Identity = 1377/1659 (83.00%), Postives = 1473/1659 (88.79%), Query Frame = 0
Query: 1 MRTRFLDIDYFATGNESFHCLPLPHLTSKPLSTVGDLLHFDFVPEISLGIDRLTIDSALS 60
MRTRFL+ID+FA GNESFH LP+PHL S PLSTVGDLLHFDF+PEISLGID L+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNDFRDARGQSSRFQGSTERFFSTESDETRFLEEEDKVIRKDNVDGD 120
+FFDDVLPRRI+DD+ +RDA QSS F GS ER FS+ S TR E+E K +DN++G
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSGSVGTRLREQEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEF-KDIGTDIRNRNLAYDMIQFETPQLDAFLEIAFLFEKEEVLILTVLP 180
WKNFGSETSE EF KDIGT+IRNRN + DMIQFETPQLDAFLE AFLFEKEEV ILT +P
Sbjct: 121 WKNFGSETSEMEFIKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEKEEVQILTGMP 180
Query: 181 EGEFNLETLNQGLLRYPSEIKESVYAVERITSEYLLDQRSCLFEDDFAQDQKLLHQLNFP 240
E EF+LETLNQGLL+YPSE+KES+Y VE I SEYLLDQ SCLFEDDFAQDQKL HQ FP
Sbjct: 181 EVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTFP 240
Query: 241 FLEVDEMVLEILAFLSLQDELFFILKNTESSHRIQDDNLLVNNEEYLCSMKYDVEEFLSD 300
FLEVDEMVLE LAFLSLQDELFFIL+NTES+H IQDDNLLVNNEEYL SM+ D EEFLSD
Sbjct: 241 FLEVDEMVLETLAFLSLQDELFFILENTESAHMIQDDNLLVNNEEYLSSMRCDAEEFLSD 300
Query: 301 HFLRPCAVSELASHVSSGG-SDLMSMMETLEIPVSSGVQTKSSCDWLVGPAIFEEFQLLD 360
HFLRPCAVSELAS SGG SDLMSMMETLEI VSS VQTKSSCD V PAIFEEFQLLD
Sbjct: 301 HFLRPCAVSELASPDISGGLSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLLD 360
Query: 361 IYSNRPFEVFFDLELSAVSEISDCMTIENTNFKSFNELIVCHELALVDDTFKSLPVPILS 420
YSN+ F V DLE+SA+SEI+DC +IENTNFKSFNELIVCHEL LVDDTFKSLPVPILS
Sbjct: 361 TYSNQHFGVILDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPILS 420
Query: 421 SQGPERSLYAFIEDVLANLNGQSLSASDSIYLDWLLLEENSCSSGIYSSYQNMLEEINLK 480
SQG E+ L AFIEDVLANLN QSLSASD IYLDW LL+E+S SSG+YSSYQNMLEEINLK
Sbjct: 421 SQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINLK 480
Query: 481 PVEFDQEPCEKDSIFYRYVFSDDTLVRERTEDEVELKESLTDGISILPSQTINVASSKLL 540
PVEFDQEPCE D IFYRYVFSDD LVRERTED+ ELKES +GI +L QTI+VASSKLL
Sbjct: 481 PVEFDQEPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSKLL 540
Query: 541 NDRCQQKGRQILAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKGESVFSAIDCNT 600
N+RCQQK RQ LAAV N+EKAL SWKSKSESNDL FFLNSQKPA RK ESVFS ID NT
Sbjct: 541 NERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPARVRKSESVFSEIDTNT 600
Query: 601 MLPKVPCDGQLTNQPSMSTADVSMKQLNVALHQVCLSDNILDLINNSEKIYVAILQNETE 660
LPKVP DG LTN+PSMS+AD S+KQLNVA+HQVCLSDNIL LINNSEK Y+AILQNETE
Sbjct: 601 TLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNETE 660
Query: 661 LRKTYLPYVAEDYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEKIMTLATLYATKQIAWYL 720
LRK YLPYVAEDY LM+SLPKQ LIDCIKKIYLQGT+ YWEEKIMTLATLYATKQI WYL
Sbjct: 661 LRKKYLPYVAEDYLLMLSLPKQMLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWYL 720
Query: 721 CFYGIHPAHLYLKKLCQSLECLKSRLGFLVSLIEDAGRMVDREITLSHPALTTIQDILCS 780
CFYGIHPAHLYLKKLCQS ECLKSRLGFLVS IE+AG+MV REIT+SHPALTTIQ+ILCS
Sbjct: 721 CFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILCS 780
Query: 781 KTSTSTLKVLVVANQIFWWSLKTLFGSMGLSFEELNYESPTDRQVSNANIMVDNFVSNCL 840
+TS S+LKVLVVANQIFWWSLK L GS+G+SF ELNY S TD QVSNAN MVD+ SNCL
Sbjct: 781 RTSISSLKVLVVANQIFWWSLKKLLGSLGISFAELNYGSLTDEQVSNANAMVDDLASNCL 840
Query: 841 LVSQEHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINMPHLHFVMLELDKCGNCKAF 900
LVS+E+ISGSFPFNKFSI+LEYGGLNGSSQIS YFS LI+MPHLHF+MLELDKCGNCKAF
Sbjct: 841 LVSEEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKAF 900
Query: 901 CEAVDLPQHNELTIEEKSLVENQTRTLEKLLNFLPVAEKYILASPEATIEAEDGRVPLQV 960
CE VD PQHNELTIEEKSLVENQT LEKLLNFLPV EKYILASP+ TIEAE+ RV L+
Sbjct: 901 CEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVSLRA 960
Query: 961 PVVPVLDKSQHIDLMSVPEAIVIVNTQKFEKEMIVSRRSSYQRILALEKEGVQVVERDLS 1020
PVVPV DKSQH DL+S PEAI+IVNTQKFEKEMIV RRSSYQRILALEKEGVQVVERDL
Sbjct: 961 PVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDLC 1020
Query: 1021 WPVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIENIATDVLTSLSFAFSGCVLV 1080
PVDLII G+CL WYDCTNI K STSNEAS LNLCIENIATDVLTSLSFAF GCVLV
Sbjct: 1021 LPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLSLNLCIENIATDVLTSLSFAFRGCVLV 1080
Query: 1081 FEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTDEIILSCIENVSKLVARHLY 1140
FEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSS+LTDEIIL CIENVSKL+ R +Y
Sbjct: 1081 FEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRRIY 1140
Query: 1141 PKMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEWPHERRLHAIKKYCIPDESV 1200
PKMSESETLAESFLT FPSINPL AH ILSSES+LADFLEWPHERRLHAI+KY IPD+ +
Sbjct: 1141 PKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSIPDDCI 1200
Query: 1201 SLFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNSERKRRNFTGGTQCIDKNMD 1260
SLFSALCKYGEREDSKSVMTDCSSS+SSG DSEKCHFNGNSERKRRNFTGG+QCI+KN D
Sbjct: 1201 SLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGSQCIEKNTD 1260
Query: 1261 LLNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGLSSSVNHFFDQNHNLESFDA 1320
L +NTLN FT GT ETL ASKSFGSQ+FED EIFCDLKGLSSSVN+FFDQNHNL SFDA
Sbjct: 1261 CLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNLASFDA 1320
Query: 1321 TILMDPISVCKPRDSWISTAPEISDEIRRGCSSYVQNQGLDPNEKKLQNLHNMNKPENQH 1380
T+ MDP VCKPRD WISTAPEISDEIRR CSS+VQNQGLD ++KK+ N HNMNK EN H
Sbjct: 1321 TVSMDPTRVCKPRDCWISTAPEISDEIRRHCSSFVQNQGLDRSKKKIHNFHNMNKSENHH 1380
Query: 1381 EELIGEVVNLIDNPVLKDDFATMTPMNFLPSMLDNEKDSSRKSKIQKRLSYGQSDHPFCA 1440
EELI EV NLIDNPVLKD FATM PMNFLPSML+NE DSSRKSKIQ+RLSYGQSDHPFCA
Sbjct: 1381 EELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSDHPFCA 1440
Query: 1441 VDIANNSSSDFWSSINLHRQSSEGLDNHFPDPSFKPSIVPLRYKDDHSDEGFIQNSTRDS 1500
VD+ NNSSSDFWSSINLH QSS GLDN FPDPSF+PSI+PLRYKDDH DEG QN RDS
Sbjct: 1441 VDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQNPLRDS 1500
Query: 1501 KVLFSLSEKDTSHSDVTPLSIALRSKHLQESSPWTMEFLNRVREKSRNRRHSVPRGSSSP 1560
KV FSLSEK TSHSDVTPLS+ALRSKHLQESSPWTMEFLNR+REKSRNR+HSVPRGSSSP
Sbjct: 1501 KVSFSLSEKHTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPRGSSSP 1560
Query: 1561 FPEHLGNVKKTVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLAPTSEL 1620
FPE+LGNVKKTVKRRSPSILEFFKYQGGST RKKPEQKR K S QSSNSSKNVL T EL
Sbjct: 1561 FPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLVATREL 1620
Query: 1621 SSGTPIDKRSRQTLSFAIDGNGSQTKLVWSNDNYGLGKS 1658
SSGTPIDKRSRQTLS+A DGNGSQTKLVWSNDNYGLGK+
Sbjct: 1621 SSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKN 1659
BLAST of Lcy02g000120.1 vs. TAIR 10
Match:
AT5G52290.1 (shortage in chiasmata 1 )
HSP 1 Score: 781.2 bits (2016), Expect = 1.7e-225
Identity = 616/1709 (36.04%), Postives = 894/1709 (52.31%), Query Frame = 0
Query: 1 MRTRFLDIDYFATGNE------SFHCLPLPHLTSKPLSTVG--DLLHFDFVPEISLGIDR 60
MRTRFL+IDYF+T F LP P P+ G D L F + +S+ I
Sbjct: 1 MRTRFLNIDYFSTPPSHVFETLGFLNLPAPDNFPAPIVYNGEEDRLRFGSIENVSIPIGN 60
Query: 61 LTIDSALSKFFDDVLPRRIDDDNDFRDARGQSSRFQGSTERFFSTESDETRFLEEEDKVI 120
L I++ALSKF DV+P R+ D+R S S ++S E D
Sbjct: 61 LPIEAALSKFLSDVVPDRV--SVDYRVFEIDDS----SLGVYYSDEKD------------ 120
Query: 121 RKDNVDGDWKNFGSETSETEFKDIGTDIRNRNLAYDMIQFETPQLDAFLEIAFLFEKEEV 180
DGD D T +I+ ETP+LD +E L E+
Sbjct: 121 -----DGD-----------AIADKATP--------KIIELETPELDFEMENKLLCTSEDH 180
Query: 181 LILTVLPEGEFNLETLNQG---LLRYPSEIKESVYAVERITSEYLLDQRSCLFEDD-FAQ 240
L N +G +L+ +I+E +Y+V+ I S+Y + + + E++ F +
Sbjct: 181 LQCFSEVLEIKNDPVKYEGSDIILQNSKDIQEQIYSVDYIPSDYFTENNTSVAENECFRK 240
Query: 241 DQKLLHQLNFPFLEVDEMVLEILAFLSLQDELFFILKNTESSHRIQDDNLLVNNEEYLCS 300
Q FP LEVDE+ L L+ LS+ D++F +L+ E +L++N++E + S
Sbjct: 241 IQPWFKDARFPLLEVDEVNLSELSSLSVLDKVFTVLETIEPQDTNAGSSLIINSKELIGS 300
Query: 301 MKYDVEEFLS-DHFLRPCAVSELASHVSSGGSDLMSMMETLEIPVSSGVQTKSSCDWLVG 360
YD+ + LS D +L S++ D++++ LEI + Q K +
Sbjct: 301 KDYDLLDVLSTDCYLNKSGQSDVVPEDEFSEMDIVTI---LEISNAEEFQGK-----VAV 360
Query: 361 PAIFEEFQLLDIYSNRPFEVFFDLELSAVSEISDCMTIENTNFKSFNELIVCHELALVDD 420
P +EEFQ+LD+ + F++F L+ + EI M + NFK F+EL+V ELA DD
Sbjct: 361 PVTYEEFQILDVDISDVFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAFTDD 420
Query: 421 TFKSLPVPILSSQGPERSLYAFIEDVLANLNGQSLSASDSIYLDWLLLEENSCSSGIYSS 480
FKSLP PIL RSL EDVL+ + QSLSAS+ IYL W LLEE + + Y
Sbjct: 421 AFKSLPTPILHDYEMTRSLELIYEDVLSKIKPQSLSASNDIYLPWNLLEERNHNHCDYP- 480
Query: 481 YQNMLEEINLKPVEFDQEPCEKDSIFYRYVFSDDTLVRERTEDEVELKESLTDGISILPS 540
EEI ++++ E E D Y ++FS+D E VE GIS L
Sbjct: 481 ----FEEIVTFNIDYNWEASEGDKWVYDFIFSEDAF----CEPLVEKCTEPFYGISNLDE 540
Query: 541 QTINVASSKLLNDRCQQKGRQILAAVVNTEKALLSWKSKSESNDLNFFLNSQKPAGSRKG 600
S LL + Q+ G + A N +KA L +KS S +DL FF++ +K
Sbjct: 541 HAPVNTSHGLLENPFQKTGARDCAVDDNAKKATLLFKSMSAFDDLTFFMDPKKAVIEDNL 600
Query: 601 ESVFSAI-----DCNTMLPKVPC-DGQLTNQPSMSTADVSMKQLNVALHQVCLSDNILDL 660
ES A C ++ K C G + P K + LH V S+NI L
Sbjct: 601 ESRVEAAKTTNHKCMSIDSKASCRSGGMHPNP---------KTEEMILHSVRPSENIQAL 660
Query: 661 INNSEKIYVAILQNETELRKTYLPYVAEDYFLMVSLPKQKLIDCIKKIYLQGTSNYWEEK 720
+ K Y+ ++++E+E ++ED ++S+ K KLIDCI+K + T ++K
Sbjct: 661 VGEFVKSYLTLVKDESE-------NLSEDKLKLLSISKGKLIDCIRKANVHKT-QLADDK 720
Query: 721 IMTLATLYATKQIAWYLCFYGIHPAHLYLKKLCQSLECLKSRLGFLVSLIEDAGRMVDRE 780
T A L A KQ+ WY+CF+GIH A++YL K+C+S +K L L S +E + + +
Sbjct: 721 TFTFALLLAIKQMTWYMCFFGIHVAYIYLNKVCRSSNPMKIGLHTLYSAVETEHKSDETD 780
Query: 781 ITLSHPALTTIQDILCSKTSTSTLKVLVVANQIFWWSLKTLFGSMGLSFEELNYESPTDR 840
IT SHP+L IQ IL S+ + K L++A ++FW SLK L SMGLS+ +LN SP+
Sbjct: 781 ITRSHPSLAVIQGILQSEFARGNSKALLLAEKVFWSSLKRLLMSMGLSYNDLNSPSPSGN 840
Query: 841 QVSNANIMVDNF--VSNCLLVSQEHISGSFPFNKFSIILEYGGLNGSSQISTYFSKLINM 900
+ + + F +S+CL++S E IS SFP FS+I+EYGG N S + S + SKL +
Sbjct: 841 RPNVHEAIELGFLPISDCLIISYEQISPSFPVENFSVIVEYGGPNASPRYS-FPSKLDSF 900
Query: 901 PHLHFVMLELDKCGNCKAFCEAVDLPQHNELTIEEKSLVENQTRTLEKLLNFLPVAEKYI 960
P HF+ +ELD C C V +P L + + VE +T LE++LNF+P+ +
Sbjct: 901 PSFHFIKVELDMPSACGQLCAGVTVPY--SLKMIKGDEVETKTGWLEEVLNFVPLEKVCY 960
Query: 961 LASPEATIEAEDGRVPLQVPVVPVLDKSQHIDLMSVPEAIVIVNTQKFEKEMIVSRRSSY 1020
S E T E+E + +P + +S ++++VNT+ +KEMI+SRRS+Y
Sbjct: 961 AGSSETTNESEF----ISMPQESERKRGIIEQGLSDQRSVIVVNTKTVDKEMIISRRSTY 1020
Query: 1021 QRILALEKEGVQVVERDLSWPVDLIITSGVCLMWYDCTNIHSKASTSNEASSCLNLCIEN 1080
Q++LA+EKEGVQVVERD PVDL+++ VCL+WYD + K++ + SS I +
Sbjct: 1021 QKVLAMEKEGVQVVERDSDLPVDLMLSPAVCLLWYDSETVSKKSAATIGTSSSSLSWIGD 1080
Query: 1081 IATDVLTSLSFAFSGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSDLTD 1140
IAT+VLTSLSF+FS C++VFEGE + L+ VM+SSD LYAAA SL I Q+FCS S++LTD
Sbjct: 1081 IATNVLTSLSFSFSTCIMVFEGEPAFLAAVMDSSDELYAAAGSLGISLQMFCSSSANLTD 1140
Query: 1141 EIILSCIENVSKLVARHLYPKMSESETLAESFLTGFPSINPLTAHAILSSESILADFLEW 1200
EIIL CI++ KL H+ KM ESE+LAESFLT FPS+NPLTA ILSS L +F++
Sbjct: 1141 EIILKCIKSSVKLSKLHV--KMPESESLAESFLTKFPSVNPLTAQVILSSSGSLLEFMKL 1200
Query: 1201 PHERRLHAIKKYCIPDESVSLFSALCKYGEREDSKSVMTDCSSSVSSGHDSEKCHFNGNS 1260
PH+ ++ +KY +P+ESV LFS++C+YG REDS+SVMTD SSSVSSG DS+ H + +S
Sbjct: 1201 PHKSKVERTQKYHVPEESVDLFSSVCRYGAREDSRSVMTDSSSSVSSGPDSDTHHVSVHS 1260
Query: 1261 ERKRRNFTGGTQCIDKNMDLLNTNTLNLFTPGTTETLAASKSFGSQMFEDSEIFCDLKGL 1320
K++ + ID + DL++ F+P KS G +DS
Sbjct: 1261 GSKKKQYIAEKDEIDMD-DLVH------FSPSIEFADTQLKSSGDFQLDDS--------W 1320
Query: 1321 SSSVNHFFDQNHNLESFDATILMDPISVCKPRDSWISTAPEISDEIRRGCSS-------- 1380
SS + F + E DA P + P DSW S PE D+ SS
Sbjct: 1321 SSKDHEIFHFDPVTEFSDAP--FKPSGISHPNDSWPSKDPERFDKKSGPGSSSKDTFWEK 1380
Query: 1381 ----------------------------YVQNQGLDPNEKKLQNLHNMNKPENQHEELIG 1440
QN+G + NLH+ EN + G
Sbjct: 1381 DQPDFSVEDSLPGIPELEDWSFPVKDKFMSQNRGCKFPVMRDFNLHDNRNSENFIADYKG 1440
Query: 1441 EVVNLIDNPVLKDDFATMTPMNFLPSMLD--NEKDSSRKSKIQKRLSYGQSDHPFCAVDI 1500
EV++ D L++DF N ++ NE++ RKSK ++LS+ S P
Sbjct: 1441 EVIDRADK-YLEEDFPPSPGYNRFARIVSDVNEEELPRKSKSSRKLSFFGSLQPNFPKAA 1500
Query: 1501 ANNSSSDFWSSINLHRQSSEGLDNHFPDPSFKPSIVPLRYKDDHSDEGFIQNSTRDSKVL 1560
+SSS+ +++ + DN+ + + R + + +++ +++
Sbjct: 1501 DIDSSSERYAT-----EKDSKYDNNTSLRGYADNYPAKRQRTLLEEVLTRRSAVPTTELP 1560
Query: 1561 FSLSEKDTSHSDVTPLSIALRSKHLQESSPWTMEFLNRVREKSRNRR--HSVPRGSSSPF 1620
F ++ SH +PLS A+RS + +SSPWT++FLNRVRE+SR R+ S+P +S P
Sbjct: 1561 F---REEISHFGGSPLSNAIRSSNQVQSSPWTVDFLNRVRERSRARKQQQSLPSYASPPS 1593
Query: 1621 PEHLGNVKK-TVKRRSPSILEFFKYQGGSTQRKKPEQKRQKQSMQSSNSSKNVLAPTSEL 1648
E GN+KK KR+SPSILEFFKY+GG+ K E+KRQK+S SS S KN S L
Sbjct: 1621 LETPGNIKKANTKRKSPSILEFFKYKGGN---KLQEEKRQKRSKNSSASPKNERF-YSPL 1593
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| F4KG50 | 2.4e-224 | 36.04 | Protein SHORTAGE IN CHIASMATA 1 OS=Arabidopsis thaliana OX=3702 GN=SHOC1 PE=1 SV... | [more] |
| B9F1C0 | 8.3e-137 | 28.95 | Protein SHORTAGE IN CHIASMATA 1 homolog OS=Oryza sativa subsp. japonica OX=39947... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1I9N8 | 0.0e+00 | 83.29 | protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
| A0A6J1I842 | 0.0e+00 | 83.19 | protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
| A0A6J1I320 | 0.0e+00 | 82.99 | protein SHORTAGE IN CHIASMATA 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
| A0A6J1GJU9 | 0.0e+00 | 82.69 | protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1... | [more] |
| A0A6J1GJP5 | 0.0e+00 | 82.59 | protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022971834.1 | 0.0e+00 | 83.29 | protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita maxima] | [more] |
| XP_022971833.1 | 0.0e+00 | 83.19 | protein SHORTAGE IN CHIASMATA 1 isoform X2 [Cucurbita maxima] | [more] |
| XP_022971832.1 | 0.0e+00 | 82.99 | protein SHORTAGE IN CHIASMATA 1 isoform X1 [Cucurbita maxima] | [more] |
| XP_022952237.1 | 0.0e+00 | 82.69 | protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita moschata] | [more] |
| XP_023554172.1 | 0.0e+00 | 83.00 | protein SHORTAGE IN CHIASMATA 1 isoform X4 [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G52290.1 | 1.7e-225 | 36.04 | shortage in chiasmata 1 | [more] |
