Lag0042167.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0042167.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr13: 37728121 .. 37728601 (+)
Sequence length231
RNA-Seq ExpressionLag0042167.1
SyntenyLag0042167.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGAACATGAAGAGGTAAACAATGTCAATTTTTTAGAATTTTGTAAACTCTAAATTTCGTCCACATCGAATAAACACACTGTATTTATTTTGTGTGTATGTAGTTTACATTTTTTCCACTCACCGAGGAGCATACTGTTGACGATGTCATAGGAAAACAACAAGCTACCATTCAAGATTTAGTTGTATATGGAGAACCATCAAATACTAAAGGTTTGAACCAAAAATTGGAGGAAAAAATGGTAATGGTTACTAATACAACCCTTTCTCGTTTTACTTATTTTGAAGATTTAATAGAGAAGAATTTTAAGGTCTTGGAGGCTAAGATTGACCGTGTCTACTGTGAACTCAAACTCATAAGGAAAAGGGTACAGGACCAGAAATTGAAGAAAATGTTGATAGGGGAGATGAAAACGATGGTCAAGATGGAAATGGCGACAATACAGATGGGCGAGATGGGATTATTGGAGGAGAATGA

mRNA sequence

ATGTTTGAACATGAAGAGTTTACATTTTTTCCACTCACCGAGGAGCATACTGTTGACGATGTCATAGGAAAACAACAAGCTACCATTCAAGATTTAGTTGTATATGGAGAACCATCAAATACTAAAGGACCAGAAATTGAAGAAAATGTTGATAGGGGAGATGAAAACGATGGTCAAGATGGAAATGGCGACAATACAGATGGGCGAGATGGGATTATTGGAGGAGAATGA

Coding sequence (CDS)

ATGTTTGAACATGAAGAGTTTACATTTTTTCCACTCACCGAGGAGCATACTGTTGACGATGTCATAGGAAAACAACAAGCTACCATTCAAGATTTAGTTGTATATGGAGAACCATCAAATACTAAAGGACCAGAAATTGAAGAAAATGTTGATAGGGGAGATGAAAACGATGGTCAAGATGGAAATGGCGACAATACAGATGGGCGAGATGGGATTATTGGAGGAGAATGA

Protein sequence

MFEHEEFTFFPLTEEHTVDDVIGKQQATIQDLVVYGEPSNTKGPEIEENVDRGDENDGQDGNGDNTDGRDGIIGGE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..76

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0042167Lag0042167gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0042167.1.exon1Lag0042167.1.exon1exon
Lag0042167.1.exon2Lag0042167.1.exon2exon
Lag0042167.1.exon3Lag0042167.1.exon3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0042167.1cds.Lag0042167.1CDS
cds.Lag0042167.1cds.Lag0042167.1_2CDS
cds.Lag0042167.1cds.Lag0042167.1_3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0042167.1Lag0042167.1-proteinpolypeptide