Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCAAAAACAAGAGCGAGGAAAGAAAGAGAGAGTGAGAAGGAGGAGGTACCGGTTACTCTGGAAGTAAAAAAAGGGAAAACCAAGAAGAAAAGAACGCCAGAGGAAAAAGAAGCCAAGAAAAGGAGAAGGCAGCAAAGGGCGACAGAACAGGAAGAAGTTCAGGAGGTGGCAGAGGTTGTTGCCATTGCAGCGGAGGAAGGAAATACTCAAGAACCTGAAGTGCAAAACCCGGATACGGTTCAAGAAGAGAATGTTAGGGGAAATCAAGAAACAGAGACTGACGAAGTTCGAGGCGAACAGACCGCAGAGGTGTCTGAAGAAGGGAATGAACAGGGATCGGTGCAGGAGGCTTGGGTTGAAGTCATCATGTCTGAACCGCCAAAGAGGCGCCGCATTAAGCGGAAGGCAGGCCGCATCAGGGTGATTCGGAATACCCCATCGCCTCCATCATCAGACTCTGAGGAAGAAAGAAAGGAAAGAGAGAAAGAAGAAGTTGAGGACAAAGTGAGAGAAGAAACAGAAAAGAGAGTTGAGGAAGAACAGTTGCTCAAGCGCAGGGCGGAAAATGGCAAAAACATTGTTGAAGCATCAGAGGAACACGATGAAATAGAAGAACAGCAGTTACCATTTGATCGCTTCGCCAATAATTTTGCCAGAGAAAAATACGCTGAGCTTCTGAAAAAGAGATTTCTTGTTTGA mRNA sequence ATGGCAAAAACAAGAGCGAGGAAAGAAAGAGAGAGTGAGAAGGAGGAGGTACCGGTTACTCTGGAAGTAAAAAAAGGGAAAACCAAGAAGAAAAGAACGCCAGAGGAAAAAGAAGCCAAGAAAAGGAGAAGGCAGCAAAGGGCGACAGAACAGGAAGAAGTTCAGGAGGTGGCAGAGGTTGTTGCCATTGCAGCGGAGGAAGGAAATACTCAAGAACCTGAAGTGCAAAACCCGGATACGGTTCAAGAAGAGAATGTTAGGGGAAATCAAGAAACAGAGACTGACGAAGTTCGAGGCGAACAGACCGCAGAGGTGTCTGAAGAAGGGAATGAACAGGGATCGGTGCAGGAGGCTTGGGTTGAAGTCATCATGTCTGAACCGCCAAAGAGGCGCCGCATTAAGCGGAAGGCAGGCCGCATCAGGGTGATTCGGAATACCCCATCGCCTCCATCATCAGACTCTGAGGAAGAAAGAAAGGAAAGAGAGAAAGAAGAAGTTGAGGACAAAGTGAGAGAAGAAACAGAAAAGAGAGTTGAGGAAGAACAGTTGCTCAAGCGCAGGGCGGAAAATGGCAAAAACATTGTTGAAGCATCAGAGGAACACGATGAAATAGAAGAACAGCAGTTACCATTTGATCGCTTCGCCAATAATTTTGCCAGAGAAAAATACGCTGAGCTTCTGAAAAAGAGATTTCTTGTTTGA Coding sequence (CDS) ATGGCAAAAACAAGAGCGAGGAAAGAAAGAGAGAGTGAGAAGGAGGAGGTACCGGTTACTCTGGAAGTAAAAAAAGGGAAAACCAAGAAGAAAAGAACGCCAGAGGAAAAAGAAGCCAAGAAAAGGAGAAGGCAGCAAAGGGCGACAGAACAGGAAGAAGTTCAGGAGGTGGCAGAGGTTGTTGCCATTGCAGCGGAGGAAGGAAATACTCAAGAACCTGAAGTGCAAAACCCGGATACGGTTCAAGAAGAGAATGTTAGGGGAAATCAAGAAACAGAGACTGACGAAGTTCGAGGCGAACAGACCGCAGAGGTGTCTGAAGAAGGGAATGAACAGGGATCGGTGCAGGAGGCTTGGGTTGAAGTCATCATGTCTGAACCGCCAAAGAGGCGCCGCATTAAGCGGAAGGCAGGCCGCATCAGGGTGATTCGGAATACCCCATCGCCTCCATCATCAGACTCTGAGGAAGAAAGAAAGGAAAGAGAGAAAGAAGAAGTTGAGGACAAAGTGAGAGAAGAAACAGAAAAGAGAGTTGAGGAAGAACAGTTGCTCAAGCGCAGGGCGGAAAATGGCAAAAACATTGTTGAAGCATCAGAGGAACACGATGAAATAGAAGAACAGCAGTTACCATTTGATCGCTTCGCCAATAATTTTGCCAGAGAAAAATACGCTGAGCTTCTGAAAAAGAGATTTCTTGTTTGA Protein sequence MAKTRARKERESEKEEVPVTLEVKKGKTKKKRTPEEKEAKKRRRQQRATEQEEVQEVAEVVAIAAEEGNTQEPEVQNPDTVQEENVRGNQETETDEVRGEQTAEVSEEGNEQGSVQEAWVEVIMSEPPKRRRIKRKAGRIRVIRNTPSPPSSDSEEERKEREKEEVEDKVREETEKRVEEEQLLKRRAENGKNIVEASEEHDEIEEQQLPFDRFANNFAREKYAELLKKRFLV
Homology
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 152..207 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 151..178 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..54 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 70..85 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..178 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 86..105 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
Lag0041705 | Lag0041705 | gene |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Lag0041705.1.exon1 | Lag0041705.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
cds.Lag0041705.1 | cds.Lag0041705.1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Lag0041705.1 | Lag0041705.1-protein | polypeptide |
|