Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAATTCCGAACAAAATCAAGATATTCTGCTGGAGAATGTATCATGACTATCTGCCTTCAGTGTCAAATTTGCGCAGAAGAGGGATGGATTTTCAGGAGGAATGTCCCAGATGTAAGGTTAAGGAGGAAACAACTTTCCATGCCATATGGGAATGTAAAGCAGTGAGGAAATGTTGGCAGAAATCGCCATTTTTTCCGAGACCAGGTCCTAATTCCATTCGTTGTGCTGCAGATCTATTGTGGTGGTGCTGGAGGAATATGCTAGGTGCCCAATTTGAGGAGTTTGTGGTGCTGTCTTGGTGGATTTGGAATAGAAGGAACAAGGAGTTTTTTGGAGGGAGCTTTAATTCGGAGATGGAGGATGGAGGGTGGGGTTGGGTTGTGGAGTACTTAGCCCATTTTCGGGCATTCCAGGGGAAAGGGGACATGAGAGGGGCGGGTATGAGGGTGGTTTCGGGTTGGAGCCCTCCGATTTTTCCTAATTATAAACTCAACACAGATGTTGCAGTTGATTCAGAGATGCAATTGAGTAGTATGAGAGCGGTGGTGCGAAATGAGAGGGGAGAAGTTATGCTTACCTTAATGAGGAGGATTCCATTTGTGCAAGATGTGGATATCCTTGAAGTGTTGGCTATTCGAGAGGGCTTGGCTGTGCGAGGGAGATGGGGCTCACAAAGCTGGAGGTTGAGTCAGACTCGGCTCGAGTGATTTCCCTGCTTCGTTCTGAGGTGAGAGACATCTCAAATTTGGGCGTTGTGGCGGAGGACATAAAGCAGATGGCGAGGACCTTGAGGGTATGTGTGTTCCGGTGGTGTAGCAGGTCAGCGAATCGACTGGCCCACGAAGTTGCGAGGACGGCTCTGGTGCAGCGGTGCGAAGGAATCTGGTCGGAGGATGTTCCAGCGGTGGTAGAAGAGGTGTATCGCTCTGAGGTTTTGGACAGTCCCTTCGGTGTGTCGGGGGGCTGTAGGCTTTAG
mRNA sequence
ATGCAAATTCCGAACAAAATCAAGATATTCTGCTGGAGAATGTATCATGACTATCTGCCTTCAGTGTCAAATTTGCGCAGAAGAGGGATGGATTTTCAGGAGGAATGTCCCAGATGTAAGGTTAAGGAGGAAACAACTTTCCATGCCATATGGGAATGTAAAGCAGTGAGGAAATGTTGGCAGAAATCGCCATTTTTTCCGAGACCAGGTCCTAATTCCATTCGTTGTGCTGCAGATCTATTGTGGTGGTGCTGGAGGAATATGCTAGGTGCCCAATTTGAGGAGTTTGTGGTGCTGTCTTGGTGGATTTGGAATAGAAGGAACAAGGAGTTTTTTGGAGGGAGCTTTAATTCGGAGATGGAGGATGGAGGGTGGGGTTGGGTTGTGGAGTACTTAGCCCATTTTCGGGCATTCCAGGGGAAAGGGGACATGAGAGGGGCGGGTATGAGGGTGGTTTCGGGTTGGAGCCCTCCGATTTTTCCTAATTATAAACTCAACACAGATGTTGCAGTTGATTCAGAGATGCAATTGAGTAGTATGAGAGCGGTGGTGCGAAATGAGAGGGGAGAAGTTATGCTTACCTTAATGAGGAGGATTCCATTTGTGCAAGATGTGGATATCCTTGAAGTGTTGGCTATTCGAGAGGGCTTGGCTGTGCGAGGGAGATGGGGCTCACAAAGCTGGAGGTCAGCGAATCGACTGGCCCACGAAGTTGCGAGGACGGCTCTGGTGCAGCGGTGCGAAGGAATCTGGTCGGAGGATGTTCCAGCGGTGGTAGAAGAGGTGTATCGCTCTGAGGTTTTGGACAGTCCCTTCGGTGTGTCGGGGGGCTGTAGGCTTTAG
Coding sequence (CDS)
ATGCAAATTCCGAACAAAATCAAGATATTCTGCTGGAGAATGTATCATGACTATCTGCCTTCAGTGTCAAATTTGCGCAGAAGAGGGATGGATTTTCAGGAGGAATGTCCCAGATGTAAGGTTAAGGAGGAAACAACTTTCCATGCCATATGGGAATGTAAAGCAGTGAGGAAATGTTGGCAGAAATCGCCATTTTTTCCGAGACCAGGTCCTAATTCCATTCGTTGTGCTGCAGATCTATTGTGGTGGTGCTGGAGGAATATGCTAGGTGCCCAATTTGAGGAGTTTGTGGTGCTGTCTTGGTGGATTTGGAATAGAAGGAACAAGGAGTTTTTTGGAGGGAGCTTTAATTCGGAGATGGAGGATGGAGGGTGGGGTTGGGTTGTGGAGTACTTAGCCCATTTTCGGGCATTCCAGGGGAAAGGGGACATGAGAGGGGCGGGTATGAGGGTGGTTTCGGGTTGGAGCCCTCCGATTTTTCCTAATTATAAACTCAACACAGATGTTGCAGTTGATTCAGAGATGCAATTGAGTAGTATGAGAGCGGTGGTGCGAAATGAGAGGGGAGAAGTTATGCTTACCTTAATGAGGAGGATTCCATTTGTGCAAGATGTGGATATCCTTGAAGTGTTGGCTATTCGAGAGGGCTTGGCTGTGCGAGGGAGATGGGGCTCACAAAGCTGGAGGTCAGCGAATCGACTGGCCCACGAAGTTGCGAGGACGGCTCTGGTGCAGCGGTGCGAAGGAATCTGGTCGGAGGATGTTCCAGCGGTGGTAGAAGAGGTGTATCGCTCTGAGGTTTTGGACAGTCCCTTCGGTGTGTCGGGGGGCTGTAGGCTTTAG
Protein sequence
MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWNRRNKEFFGGSFNSEMEDGGWGWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMRAVVRNERGEVMLTLMRRIPFVQDVDILEVLAIREGLAVRGRWGSQSWRSANRLAHEVARTALVQRCEGIWSEDVPAVVEEVYRSEVLDSPFGVSGGCRL
Homology
BLAST of Lag0041340.1 vs. NCBI nr
Match:
XP_023915286.1 (uncharacterized protein LOC112026812 [Quercus suber])
HSP 1 Score: 132.1 bits (331), Expect = 7.4e-27
Identity = 85/222 (38.29%), Postives = 111/222 (50.00%), Query Frame = 0
Query: 1 MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCW 60
++IPNKIK+F W+ H+ LP++ LR+R + E CP CK+ +T HA+WECKA + W
Sbjct: 751 LRIPNKIKVFMWQACHNILPTLEKLRQRRIVENELCPICKLVPKTILHALWECKAAQDVW 810
Query: 61 QK-SPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWNRRNKEFFGGSFNSE 120
S + G L W M FE F+VL W +W+RRN+ FGG
Sbjct: 811 AGCSQRVLQKGLTVQSSMLQLTEDMWHKMPLDVFEFFLVLCWLLWHRRNRVVFGGLL--- 870
Query: 121 MEDGGW-GWVVEYLAHF---RAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEM 180
E G G LA F R + R W PP+ YKLN DVAV S++
Sbjct: 871 QEPGALIGRARCLLAEFVEARTHLAIPESLAHSQR----WQPPVGSRYKLNFDVAVFSDI 930
Query: 181 QLSSMRAVVRNERGEVMLTLMRRIPFVQDVDILEVLAIREGL 218
S + ++RN G+VM L R P V D D EVLA R GL
Sbjct: 931 SASGVGVIIRNGDGQVMAALSARGPAVTDGDEAEVLACRRGL 965
BLAST of Lag0041340.1 vs. NCBI nr
Match:
XP_030941688.1 (uncharacterized protein LOC115966628 [Quercus lobata])
HSP 1 Score: 131.7 bits (330), Expect = 9.7e-27
Identity = 96/316 (30.38%), Postives = 135/316 (42.72%), Query Frame = 0
Query: 1 MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCW 60
+++PNKIK++ WR D LP+ +NL RR + E C CK ET HA+WEC + W
Sbjct: 870 LKVPNKIKVYGWRACQDILPTRANLARRKILEDEHCEVCKTALETGIHALWECPVAQDVW 929
Query: 61 QKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWNRRNKEFFGGSFNSEM 120
S + L + +FE F+ LSW IWN+RN GG ++
Sbjct: 930 SGSLVRLQKCTQGYDDVLQLFGELLNRLSREEFELFLTLSWVIWNQRNAVIHGG----KI 989
Query: 121 EDGG--WGWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLS 180
+D G YL +R Q + + + + V+ W PP YKLN D A+ +E+ S
Sbjct: 990 KDPGQLCKRAEVYLLEYRQAQDQLSI-PSRQQSVTQWQPPPIDRYKLNFDAAIFTELGCS 1049
Query: 181 SMRAVVRNERGEVMLTLMRRIPFVQDVDILEVLAIREG-----------LAVRG------ 240
A+VRNERGEVM L + P V + + E LA R L + G
Sbjct: 1050 GFGAIVRNERGEVMAALSVKGPLVWNSEEAEALACRRAVEFAIHAGFAELMIEGDNVNVM 1109
Query: 241 ---------------------------RWGSQSW--RSANRLAHEVARTALVQRCEGIWS 269
RW S S R AN +AH +AR A E IW
Sbjct: 1110 KAVCSNSMDKSRLGHVFQDIQCLVHGLRWSSVSCVKRGANGVAHSLARFARYVSEETIWL 1169
BLAST of Lag0041340.1 vs. NCBI nr
Match:
KAF4386304.1 (hypothetical protein G4B88_003521 [Cannabis sativa])
HSP 1 Score: 126.7 bits (317), Expect = 3.1e-25
Identity = 73/227 (32.16%), Postives = 112/227 (49.34%), Query Frame = 0
Query: 6 KIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPF 65
K+KIF W++++ +LPS L +RG+ C CK ++E T HA+W C V+ W+K F
Sbjct: 121 KMKIFIWKVFNHWLPSKVELEKRGIALNTLCDWCKSQKEDTCHALWGCPKVQHIWEKMGF 180
Query: 66 FPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWNRRNKEFFGGSFNSEMEDGGW 125
F PN I AD+LWW W +F FV SW IW RRN F N D W
Sbjct: 181 FNLIQPN-INKPADVLWWLWDQFEKDKFLRFVGYSWLIWLRRNNFIFN---NKNPNDHIW 240
Query: 126 -GWVVEYLAHFRAFQGKGDMRGAGMRV--VSGWSPPIFPNYKLNTDVAVDSEMQLSSMRA 185
W +E + G + +++ + W P + +NTD A++S + + A
Sbjct: 241 VEWAMETI---EQLLGSHQQKNTEVKIKPTATWIHPPAGFFSINTDAALNSGLLGCGLSA 300
Query: 186 VVRNERGEVMLTLMRRIPFVQDVDILEVLAIREGLAVRGRWGSQSWR 230
++RN GE+++ + +P V + E AIR G+ + RW + R
Sbjct: 301 IIRNHTGELIVAEVVFLPGCLSVQLAETAAIRLGVKLALRWSIKKAR 340
BLAST of Lag0041340.1 vs. NCBI nr
Match:
XP_030964861.1 (uncharacterized protein LOC115986145 [Quercus lobata])
HSP 1 Score: 125.9 bits (315), Expect = 5.3e-25
Identity = 75/219 (34.25%), Postives = 106/219 (48.40%), Query Frame = 0
Query: 1 MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCW 60
+++PNKIK+F WR H+ LP+ NL RR + + C C ET HA+WEC + W
Sbjct: 865 LRVPNKIKVFGWRACHNILPTRDNLVRRKILEDDGCMLCSRMAETGVHALWECAVAKDVW 924
Query: 61 QKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWNRRNKEFFGGSFNSEM 120
+ + + L + A+FE F+V SW IWN+RN GG ++
Sbjct: 925 SSNMIRLQKCGQDQQDVLQLFQELMERLSTAKFEAFLVQSWLIWNQRNTVMHGG----KL 984
Query: 121 EDGGW--GWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLS 180
+D W +YL F QG+ + W PP P YKLN D A+ S++ S
Sbjct: 985 KDPSWLNKRAKDYLEDFHQAQGQLQIPVTSSSGHDTWFPPPEPIYKLNFDAAIFSKLGCS 1044
Query: 181 SMRAVVRNERGEVMLTLMRRIPFVQDVDILEVLAIREGL 218
+ AV+RN EVM + R P V D E+LA R+ L
Sbjct: 1045 GVGAVIRNVHDEVMAAMSARGPPVIDNSEAEILACRKAL 1079
BLAST of Lag0041340.1 vs. NCBI nr
Match:
XP_023908235.1 (uncharacterized protein LOC112019924 [Quercus suber])
HSP 1 Score: 124.8 bits (312), Expect = 1.2e-24
Identity = 79/227 (34.80%), Postives = 115/227 (50.66%), Query Frame = 0
Query: 1 MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCW 60
++IPNKIK+F WR HD LP+ NLR++ + + CP C + +E+T HA+WEC + W
Sbjct: 1281 LRIPNKIKVFGWRACHDILPTRRNLRKKRILVDDLCPLCGLTQESTIHALWECTIAQDIW 1340
Query: 61 QKS-PFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWNRRNKEFFGGSFNSE 120
S + G + A LL + + + E F+V +W IWN+RN+ +GG
Sbjct: 1341 HGSGRALQKCGTGQLDFVA-LLEYLLDRLNKTEVETFLVQAWLIWNQRNRVLYGGKL--- 1400
Query: 121 MEDG-----GWGWVVEYLAHFRAFQGKGDMRGAGMRVV----SGWSPPIFPNYKLNTDVA 180
ME G G + E+ + Q M G +V+ + W PP YKLN D A
Sbjct: 1401 MEPGCLNRRAVGLIEEFQQSQASLQVDAQM-GVNRQVMQTDGTRWIPPPQAVYKLNYDAA 1460
Query: 181 VDSEMQLSSMRAVVRNERGEVMLTLMRRIPFVQDVDILEVLAIREGL 218
V S AVVRN G+VM + + P VQ ++ E+LA R+ L
Sbjct: 1461 VFENSASSGFGAVVRNSTGDVMAAMTVKGPAVQGSEVAELLACRKAL 1502
BLAST of Lag0041340.1 vs. ExPASy TrEMBL
Match:
A0A7J6GTN3 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_003521 PE=4 SV=1)
HSP 1 Score: 126.7 bits (317), Expect = 1.5e-25
Identity = 73/227 (32.16%), Postives = 112/227 (49.34%), Query Frame = 0
Query: 6 KIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQKSPF 65
K+KIF W++++ +LPS L +RG+ C CK ++E T HA+W C V+ W+K F
Sbjct: 121 KMKIFIWKVFNHWLPSKVELEKRGIALNTLCDWCKSQKEDTCHALWGCPKVQHIWEKMGF 180
Query: 66 FPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWNRRNKEFFGGSFNSEMEDGGW 125
F PN I AD+LWW W +F FV SW IW RRN F N D W
Sbjct: 181 FNLIQPN-INKPADVLWWLWDQFEKDKFLRFVGYSWLIWLRRNNFIFN---NKNPNDHIW 240
Query: 126 -GWVVEYLAHFRAFQGKGDMRGAGMRV--VSGWSPPIFPNYKLNTDVAVDSEMQLSSMRA 185
W +E + G + +++ + W P + +NTD A++S + + A
Sbjct: 241 VEWAMETI---EQLLGSHQQKNTEVKIKPTATWIHPPAGFFSINTDAALNSGLLGCGLSA 300
Query: 186 VVRNERGEVMLTLMRRIPFVQDVDILEVLAIREGLAVRGRWGSQSWR 230
++RN GE+++ + +P V + E AIR G+ + RW + R
Sbjct: 301 IIRNHTGELIVAEVVFLPGCLSVQLAETAAIRLGVKLALRWSIKKAR 340
BLAST of Lag0041340.1 vs. ExPASy TrEMBL
Match:
A0A7J6FF66 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_022923 PE=4 SV=1)
HSP 1 Score: 124.4 bits (311), Expect = 7.5e-25
Identity = 82/280 (29.29%), Postives = 128/280 (45.71%), Query Frame = 0
Query: 3 IPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCWQK 62
+ K+KIF WR++H++LP + L +RGM C CK E HA+W C + W+
Sbjct: 119 LTRKMKIFIWRVFHNWLPVKTELIKRGMSMNITCNWCKSHVEDVCHALWNCPKLHNVWKH 178
Query: 63 SPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWNRRNKEFFGGSFNSEMED 122
F P+S+R A D L + +F F+ ++W IW RRNK F N ++ED
Sbjct: 179 FGFI-HQFPSSLRHAPDFLMVMKGKLSKEEFIFFIGITWLIWFRRNKCIFQ---NKDIED 238
Query: 123 GGW-GWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLSSMR 182
W W +E L AF K + VS WSPP ++ +NTD ++ +
Sbjct: 239 SIWIPWAMEMLELHLAFAHKDSHQKPSKDKVS-WSPPPLGSFMINTDASLIDGQPGCGLG 298
Query: 183 AVVRNERGEVMLTLMRRIPFVQDVDILEVLAIREGLAVRGRWGSQS------WRSANRLA 242
++R+ G ++ T IP V + E LAIR L + Q+ +S N +A
Sbjct: 299 VIIRDHLGALVTTATDYIPGCLSVLVAETLAIRLALKLAATRSMQNIFIASDSQSCNNVA 358
Query: 243 HEVARTALVQRCEGIWSEDVPAVVEEVYRSEVLDSPFGVS 276
H +A + + +W+ +P ++ D P G S
Sbjct: 359 HCLANWSRLVHVSDVWTSFLPDCAAASLKA---DLPLGTS 390
BLAST of Lag0041340.1 vs. ExPASy TrEMBL
Match:
A0A2N9G0G1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24139 PE=4 SV=1)
HSP 1 Score: 124.0 bits (310), Expect = 9.8e-25
Identity = 71/221 (32.13%), Postives = 107/221 (48.42%), Query Frame = 0
Query: 1 MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCW 60
+QIP+KI+ F WR H LP+ SNL R + C C + E+T HA+W+CK++ W
Sbjct: 1241 VQIPSKIRHFLWRACHSSLPTRSNLHHRHVLDDPRCNSCTDQIESTIHALWQCKSIVPLW 1300
Query: 61 QKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWNRRNKEFF--GGSFNS 120
P+ + S DL++ C + + + F V+ W IW RRN+ N+
Sbjct: 1301 HSIPWGQKLSKTSYTDCIDLIYQCTLTLSTNELQLFAVICWSIWYRRNRLRLQQPADTNT 1360
Query: 121 EMEDGGWGWVVEYLAHFRAFQGKGDMRG--AGMRVVSGWSPPIFPNYKLNTDVAVDSEMQ 180
++ E L F A Q +G R V W PP +K+N D AV S+
Sbjct: 1361 QLVRR----ARETLLEFHAAQDRGKQRSMQPNSTTVIKWKPPEVSRFKVNYDGAVFSDRN 1420
Query: 181 LSSMRAVVRNERGEVMLTLMRRIPFVQDVDILEVLAIREGL 218
+ + ++RN RGEVM L +RIP+ V+ +E A R +
Sbjct: 1421 EAGIGVIIRNHRGEVMGALSQRIPYPHSVEAVEASAARSAI 1457
BLAST of Lag0041340.1 vs. ExPASy TrEMBL
Match:
A0A2N9EYC3 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7737 PE=4 SV=1)
HSP 1 Score: 122.9 bits (307), Expect = 2.2e-24
Identity = 70/221 (31.67%), Postives = 107/221 (48.42%), Query Frame = 0
Query: 1 MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCW 60
+QIP+K + F WR H LP+ SNL R + C C + E+T HA+W+CK++ W
Sbjct: 1314 LQIPSKTRHFLWRACHSSLPTRSNLHHRHILDDPRCSSCTDQIESTIHALWQCKSIVPLW 1373
Query: 61 QKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWNRRNKEFF--GGSFNS 120
P+ + S DL++ C + +F+ F V+ W IW RRN+ N+
Sbjct: 1374 HSIPWGQKLSKTSYTDCIDLIYQCTLTLSTNEFQLFAVICWSIWYRRNRLRLQQPADTNT 1433
Query: 121 EMEDGGWGWVVEYLAHFRAFQGKGDMRG--AGMRVVSGWSPPIFPNYKLNTDVAVDSEMQ 180
++ E L F Q +G R + V W PP YK+N D AV ++
Sbjct: 1434 QLIRR----ARETLLEFHEAQDRGKQRSLQSNSTTVIKWKPPEDRRYKVNYDGAVFNDRN 1493
Query: 181 LSSMRAVVRNERGEVMLTLMRRIPFVQDVDILEVLAIREGL 218
+ + ++RN RGEVM L +RIP+ V+ +E A R +
Sbjct: 1494 EAGIGVIIRNHRGEVMGALSQRIPYPHSVEAVEASAARSAI 1530
BLAST of Lag0041340.1 vs. ExPASy TrEMBL
Match:
A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)
HSP 1 Score: 120.6 bits (301), Expect = 1.1e-23
Identity = 86/301 (28.57%), Postives = 124/301 (41.20%), Query Frame = 0
Query: 1 MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCW 60
M IPNKIK+F WR+ D LP+ NL +RG++ C C E + H W CK W
Sbjct: 842 MHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALW 901
Query: 61 QKSPFFPRPGPNSIRCAADLLWWCWRNMLGAQFEEFVVLSWWIWNRRNKEFFGGSFNSEM 120
S F + P I L ++ A FEE V+ W +WN+RN F S +
Sbjct: 902 INSK-FGKLSPFLI------LRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVF 961
Query: 121 EDGG--WGWVVEYLAHFRAFQGKGDMRGAGMRVVSGWSPPIFPNYKLNTDVAVDSEMQLS 180
+ G W +Y FR + W PP YK+NTD + + Q +
Sbjct: 962 KIGMELVEWANKYAMEFREAKSNPITGRVTNTAEILWQPPDEGIYKINTDASFLASDQHA 1021
Query: 181 SMRAVVRNERGEVMLTLMRRIPFVQDVDILEVLAIREGLAVRGRWG-------------- 240
+ ++ N+RG+VM + + +Q VD+ E +A EGL + G
Sbjct: 1022 GLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQLASEIGMHPALEDLSETGEI 1081
Query: 241 ----SQSW------------RSANRLAHEVARTALVQRCEGIWSEDVPAVVEEVYRSEVL 270
W R N+ AH +AR AL+ IW ED P ++ E L
Sbjct: 1082 VLKAKNFWTQSLHASFNFVKREGNKAAHMLARRALLLHEFSIWMEDWPLELKSCLEMECL 1135
BLAST of Lag0041340.1 vs. TAIR 10
Match:
AT2G02650.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 47.4 bits (111), Expect = 2.2e-05
Identity = 20/63 (31.75%), Postives = 32/63 (50.79%), Query Frame = 0
Query: 1 MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCW 60
+ + KIK F WR L + + LR R +D C RC ++EET H ++ C + W
Sbjct: 40 LHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQSVW 99
Query: 61 QKS 64
+ +
Sbjct: 100 RSA 102
BLAST of Lag0041340.1 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 47.0 bits (110), Expect = 2.9e-05
Identity = 21/63 (33.33%), Postives = 29/63 (46.03%), Query Frame = 0
Query: 1 MQIPNKIKIFCWRMYHDYLPSVSNLRRRGMDFQEECPRCKVKEETTFHAIWECKAVRKCW 60
+ I K+K F WR L + L RGM CPRC + E+ HA++ C W
Sbjct: 165 LPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAW 224
Query: 61 QKS 64
+ S
Sbjct: 225 RLS 227
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A7J6GTN3 | 1.5e-25 | 32.16 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_003521 PE=4 SV=1 | [more] |
A0A7J6FF66 | 7.5e-25 | 29.29 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_022923 PE=4 SV=1 | [more] |
A0A2N9G0G1 | 9.8e-25 | 32.13 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24139 PE=4 SV=1 | [more] |
A0A2N9EYC3 | 2.2e-24 | 31.67 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A6J1DAR4 | 1.1e-23 | 28.57 | uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
Match Name | E-value | Identity | Description | |
AT2G02650.1 | 2.2e-05 | 31.75 | Ribonuclease H-like superfamily protein | [more] |
AT3G09510.1 | 2.9e-05 | 33.33 | Ribonuclease H-like superfamily protein | [more] |