Lag0041303.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0041303.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ribonuclease H
Location	chr13: 15284052 .. 15287929 (-)
Sequence length	2724
RNA-Seq Expression	Lag0041303.1
Synteny	Lag0041303.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCACCAAGAAGAAGAAGGAAAAATAGATGGAAATAGTGTACATCGCATCAACATGCAGTGTCGCCTTCAGCAGAAAGTGCCTAAGAAATTGGTTGATCCAGGGAGTTTTTCTATTCCTTGTAATTTTGGTACTTACTCTTGTAGAGCATTATGTGATCTTGGTGCCAGCATAAATATTATTCCTTTGTCATTATGCAAGAAATTAAACATAGGAGAAATAAAATCTATTTCTGATAGGCTCCAGTTGGCTGACCAGTCTGTGGTTAGTCCATATGGAATTGTGAAGAATGTTTTAATTAAAGTAGGTAAATTTTTCCTCCCTGTTGATTTTTTTGTGATGAATATTAAAGAGAATCCTGCAATTCCTGTCATATTAGGGAGACCATTCCCTCTCTCTCCCTCGAAACACATAAGAGAGAATGGTAGTGGGCTATAGGAAAGGTGCAAGGAAGAGCACCATTGATGGATCTCCGACGAGCGACCTCTCTCTCCCTCGAAGACCGACGGCCTCACTCTCTCCCTCGTCCTTCCTTGCGCGCGAAGACCCACGACGAGCGACTCGATTCTCTCCCTCCTCGCGTGCAAAGGGGAACAATCTGAAACAAAACCCAAGACCGATTCTGAAAAAGAGACGGAGATGGCACAAGAGCGGCGGCGCGAGGACGGAGCGGCGGTGGAGAGAGATTTGAAATGGGAGAAAGATAAAAAAAAAACTTCAAGATCAAGGAGAGAGGAAGGAAGAGAATAAAATAAAAGAAAAGAAAAGAAAAAAGGAAAAAAGGAAAAAAAAAAAAAACTTCGCCGGCAGTGGCCGGCCATCGGCAGCCGCCGGTCGTCGGCAGCTGGCGGCCGACCGACCTTGAAGAAGAAGAATAAGAAGAAGGATGATGAGGTGGAAGGAGAGAGAAAGATATAAATATAAAAATTCATAATAATTTATTGTTTTTATTTGTTTTTATTAAAAAATAAAATAAAATATTTTTTTATTAAAATAATAGTGTCACGTCAACAACCGTTAGTATTTAACAGAAAAATAGGCGGTAGGGACCAAAGTGCTTCTTATCTCAAACCTCAGGGGTATTTTTGTTAAGTTTGAAAACTCAGGGACCAAAGTGTAACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCTAATTTCTTTTAATTTTCATTTTTTTAGAATTTTTGAATAAATTGTTTAGGGTTCTCGGTGATTATGCAATAAGGAGAGAAAAAATAAATTAAGGAGCAAATCAAAGGGAATTACAAAGAAGAAAGAAAAAACTAGAGAGAAATCATCTAGAATATATATTTATTCAAATTTTAATGAAAAGTAATGATTTTGTTATATATATATATATATATGTTATAGGTGATTTTGGACCATACAGATGGACAAGGAGCTGATGAGGACAATCGGGCAGAGGCGGGACCAAAAGACCAACCCAGAGGAAGACTGGACCAACAGGTCGGGCCAAAATGGCCCGACCCATATGGTCGGCCTCGGCCTTTTGCCGAGGCCGACCATTCGGCCCGTTTGCGCGGGCCGAGCCCGGTGACCTCTATTCGGTCCCTGATGCCCCGAATCGCCTCGGTTTCGCCTGGTTCGTCCCGAAACACCACCGAATTCCTAAAAACCCTAGGAGGGCAAACAGGTATAAAACCCCCTCTTCACCACGGAAGGAGGGTTCCGAAACTCGATTCTTGACTCTCCCCTTTACTATCTGCAGCTTCTCCTCGGTTTTCTGACTTAGGCATCGGAGGCGGTGTGGCCTACACCACGCCGGTGTGCAGTGGTTTTTGCTGGTCTTGCAGGTCACGTCTTCCCCAGTTTCTACAAATTCACTGTTGGTGTCACGTGAAGGTCAGGTGAGTCTTCTGTCCGGATTTTGGCATCAACAGTTGGCGCCGTCTGTGGGGAAGAGTGCTTGCCAGTTCAGACCGCGCATCGGTGGTGTTCTGTAGGATGAATCGGGTTCAGAAGCTAGAAGGACACCTCGGGTATGGGCAGGAAGCGTCGAATCAGACTGAGGTCGGCCTCGGTATGGAAAAGGCCGACCCTAACTCCGGAGGCTGTTATGAGCAGGAAGCGCCGAATCAGACTGAGGTCGGCCTCGGTATGGAAAAGGCCGACCCTAGCTCCGGAGGCTGTTGCGAGCGGAAAGTGCCGAATCAGATTGAGGTCGGCCTCGGTATGGAAAAGGCCGACCCTAACTCCGGAGGCTGTTGCGAGGTTCCGCATGTCAGCGATGCTGCTGGACTTGACCCAAGGGGACAACCCGCGGAGGAACTGGAATCTGTACCACTAACGTCTGAGGAAAGGAGAGTGAACATCGGCACCAAATTGGGGGCTGAGCAGAGGGGCAGACTGGTTGGTTTCTTGAGGGCTAATGCGGATCTGTTTGCATGGTCACACGAGGATATGCCGGGAATTGACCCGGGAGTGATGGTTCACCAGTTGAACGTGAATAGGGATTTCAAGCCAGTAAAACAGAGGCGAAGAGCATTTAATTCGGAGAGGAACGAGGTTGTAGCCAGTCAAGTGGATGAGCTACTTAAAGCAGGGTTCATCCGAGAAGTTCATTATCCCCAATGGTTGTCCAATGTGGTACTGGTAAAGAAGGCTAACGGGAAGTGGCGGATGTGCATCGACTTCACCGACCTGAATAAGGCGTGCCCAAAGGACAGTTATCCTTTGCCCATGATCGACCAGTTGGTTGACGCAACAGCAGGGCACGAGATGCTGAGTTTTATGGATGCATATTCAGGGTACAACCAGATTAGAATGCACGAGCCCGATCAGGAAAAGACTTCATTCATCACCAGCCGAGGGTTGTATTGCTATAAGGTCATGCCGTTCGGTTTGAAGAACGCTGGGGCGACATACCAGCGAATGGTAAACCGCATGTTTGCTCCGTTACTGGGAAAGAACATGGAGGTGTACGTGGATGATATGCTGGTAAAGAGCTTGAAGTCTCAATGCCATGAGTCTGACCTTAATGAAGCTTTCCAGATCCTCCGGAAGTATCGAATGAAACTAAACCCGAGTAAGTGCGCTTTTGGGGTGACATCAGGAAAATTCCTAGGATTCATGGTGCATCAGAGGGGGATAGAGGCAGAACCACTAGCAACTATAACCGAAAAGAAGGTCACTGACTTTGTATGGAAGAATATTGTGTGCCGTTTTGGGATCCCTAACACCATTATATCAGATAATGGTAGGCAGTTCGACAATGCCGCTTTCAGGAAGTTTTGCTCAGATTTGGGTATAGCACATCGTTGTTCATCCCCAGCCCATCCGCAAGCTAACGGCCAGGTGGAGGCTGTGAATAAAATAATCAAGCAGAATCTTAAAACAAAGCTTGAAGGACTAAAAGGGGCATGGGCCGAAGAGCTCCCACGTGTACTGTGGGCGTATCGGACAACAGCACGAACCTCAACAGGAGAAACACTATTTTCCCTTTCATTCGGGGCAGAGGCGGTAGTCCCAGTGGAGGTCGGCATCCCCTCCCCCAGGACAGAACAGTTTAGTGTGCAAGGGAATGATGAAGCAGTGAGGTTGAACCTGGACCTCCTAGACGAGCATCGTGAAATGGCTCAACTCCGGGTCGCAGAGTATAAAAATAGGGTTGCCAGATATTATAACGCAAGAGTGAAAAGGCGCACCTTCAAAGAAGGAGACCTAGTACTGAGGAAAGTTATGCAAAACACCAGAGATCCCAATGCAGGTGCGTTGGGACCAGCATGGGAAGGACCTTATCAAGTTAGCAAAGTGGTCCGCCCCGGCACCTATGCCTTGGTTGATGAAAACGGGAAACCAACTCCACACCCATGGAATGCAGAACACTTGAAGATTTACTATCAGTAG

mRNA sequence

ATGACTCACCAAGAAGAAGAAGGAAAAATAGATGGAAATAGTGTACATCGCATCAACATGCAGTGTCGCCTTCAGCAGAAAGTGCCTAAGAAATTGGTTGATCCAGGGAGTTTTTCTATTCCTTGTAATTTTGGTACTTACTCTTGTAGAGCATTATGTGATCTTGGTGCCAGCATAAATATTATTCCTTTGTCATTATGCAAGAAATTAAACATAGGAGAAATAAAATCTATTTCTGATAGGCTCCAGTTGGCTGACCAGTCTGTGGTTAGTCCATATGGAATTGTGAAGAATGTTTTAATTAAATGGCCGGCCATCGGCAGCCGCCGGTCGTCGGCAGCTGGCGGCCGACCGACCTTGAAGAAGAAGAATAAGAAGAAGGATGATGAGGTGATTTTGGACCATACAGATGGACAAGGAGCTGATGAGGACAATCGGGCAGAGGCGGGACCAAAAGACCAACCCAGAGGAAGACTGGACCAACAGGTCGGGCCAAAATGGCCCGACCCATATGGTCGGCCTCGGCCTTTTGCCGAGGCCGACCATTCGGCCCGTTTGCGCGGGCCGAGCCCGGTGACCTCTATTCGGTCCCTGATGCCCCGAATCGCCTCGGTTTCGCCTGGTTCGTCCCGAAACACCACCGAATTCCTAAAAACCCTAGGAGGGCAAACAGCTTCTCCTCGGTTTTCTGACTTAGGCATCGGAGGCGGTGTGGCCTACACCACGCCGGTGTGCAGTGGTTTTTGCTGGTCTTGCAGTTGGCGCCGTCTGTGGGGAAGAGTGCTTGCCAGTTCAGACCGCGCATCGGTGGTGTTCTGTAGGATGAATCGGGTTCAGAAGCTAGAAGGACACCTCGGGTATGGGCAGGAAGCGTCGAATCAGACTGAGGTCGGCCTCGGTATGGAAAAGGCCGACCCTAACTCCGGAGGCTGTTATGAGCAGGAAGCGCCGAATCAGACTGAGGTCGGCCTCGGTATGGAAAAGGCCGACCCTAGCTCCGGAGGCTGTTGCGAGCGGAAAGTGCCGAATCAGATTGAGGTCGGCCTCGGTATGGAAAAGGCCGACCCTAACTCCGGAGGCTGTTGCGAGGTTCCGCATGTCAGCGATGCTGCTGGACTTGACCCAAGGGGACAACCCGCGGAGGAACTGGAATCTGTACCACTAACGTCTGAGGAAAGGAGAGTGAACATCGGCACCAAATTGGGGGCTGAGCAGAGGGGCAGACTGGTTGGTTTCTTGAGGGCTAATGCGGATCTGTTTGCATGGTCACACGAGGATATGCCGGGAATTGACCCGGGAGTGATGGTTCACCAGTTGAACGTGAATAGGGATTTCAAGCCAGTAAAACAGAGGCGAAGAGCATTTAATTCGGAGAGGAACGAGGTTGTAGCCAGTCAAGTGGATGAGCTACTTAAAGCAGGGTTCATCCGAGAAGTTCATTATCCCCAATGGTTGTCCAATGTGGTACTGGTAAAGAAGGCTAACGGGAAGTGGCGGATGTGCATCGACTTCACCGACCTGAATAAGGCGTGCCCAAAGGACAGTTATCCTTTGCCCATGATCGACCAGTTGGTTGACGCAACAGCAGGGCACGAGATGCTGAGTTTTATGGATGCATATTCAGGGTACAACCAGATTAGAATGCACGAGCCCGATCAGGAAAAGACTTCATTCATCACCAGCCGAGGGTTGTATTGCTATAAGGTCATGCCGTTCGGTTTGAAGAACGCTGGGGCGACATACCAGCGAATGGTAAACCGCATGTTTGCTCCGTTACTGGGAAAGAACATGGAGGTGTACGTGGATGATATGCTGGTAAAGAGCTTGAAGTCTCAATGCCATGAGTCTGACCTTAATGAAGCTTTCCAGATCCTCCGGAAGTATCGAATGAAACTAAACCCGAGTAAGTGCGCTTTTGGGGTGACATCAGGAAAATTCCTAGGATTCATGGTGCATCAGAGGGGGATAGAGGCAGAACCACTAGCAACTATAACCGAAAAGAAGGTCACTGACTTTGTATGGAAGAATATTGTGTGCCGTTTTGGGATCCCTAACACCATTATATCAGATAATGGTAGGCAGTTCGACAATGCCGCTTTCAGGAAGTTTTGCTCAGATTTGGGTATAGCACATCGTTGTTCATCCCCAGCCCATCCGCAAGCTAACGGCCAGGTGGAGGCTGTGAATAAAATAATCAAGCAGAATCTTAAAACAAAGCTTGAAGGACTAAAAGGGGCATGGGCCGAAGAGCTCCCACGTGTACTGTGGGCGTATCGGACAACAGCACGAACCTCAACAGGAGAAACACTATTTTCCCTTTCATTCGGGGCAGAGGCGGTAGTCCCAGTGGAGGTCGGCATCCCCTCCCCCAGGACAGAACAGTTTAGTGTGCAAGGGAATGATGAAGCAGTGAGGTTGAACCTGGACCTCCTAGACGAGCATCGTGAAATGGCTCAACTCCGGGTCGCAGAGTATAAAAATAGGGTTGCCAGATATTATAACGCAAGAGTGAAAAGGCGCACCTTCAAAGAAGGAGACCTAGTACTGAGGAAAGTTATGCAAAACACCAGAGATCCCAATGCAGGTGCGTTGGGACCAGCATGGGAAGGACCTTATCAAGTTAGCAAAGTGGTCCGCCCCGGCACCTATGCCTTGGTTGATGAAAACGGGAAACCAACTCCACACCCATGGAATGCAGAACACTTGAAGATTTACTATCAGTAG

Coding sequence (CDS)

ATGACTCACCAAGAAGAAGAAGGAAAAATAGATGGAAATAGTGTACATCGCATCAACATGCAGTGTCGCCTTCAGCAGAAAGTGCCTAAGAAATTGGTTGATCCAGGGAGTTTTTCTATTCCTTGTAATTTTGGTACTTACTCTTGTAGAGCATTATGTGATCTTGGTGCCAGCATAAATATTATTCCTTTGTCATTATGCAAGAAATTAAACATAGGAGAAATAAAATCTATTTCTGATAGGCTCCAGTTGGCTGACCAGTCTGTGGTTAGTCCATATGGAATTGTGAAGAATGTTTTAATTAAATGGCCGGCCATCGGCAGCCGCCGGTCGTCGGCAGCTGGCGGCCGACCGACCTTGAAGAAGAAGAATAAGAAGAAGGATGATGAGGTGATTTTGGACCATACAGATGGACAAGGAGCTGATGAGGACAATCGGGCAGAGGCGGGACCAAAAGACCAACCCAGAGGAAGACTGGACCAACAGGTCGGGCCAAAATGGCCCGACCCATATGGTCGGCCTCGGCCTTTTGCCGAGGCCGACCATTCGGCCCGTTTGCGCGGGCCGAGCCCGGTGACCTCTATTCGGTCCCTGATGCCCCGAATCGCCTCGGTTTCGCCTGGTTCGTCCCGAAACACCACCGAATTCCTAAAAACCCTAGGAGGGCAAACAGCTTCTCCTCGGTTTTCTGACTTAGGCATCGGAGGCGGTGTGGCCTACACCACGCCGGTGTGCAGTGGTTTTTGCTGGTCTTGCAGTTGGCGCCGTCTGTGGGGAAGAGTGCTTGCCAGTTCAGACCGCGCATCGGTGGTGTTCTGTAGGATGAATCGGGTTCAGAAGCTAGAAGGACACCTCGGGTATGGGCAGGAAGCGTCGAATCAGACTGAGGTCGGCCTCGGTATGGAAAAGGCCGACCCTAACTCCGGAGGCTGTTATGAGCAGGAAGCGCCGAATCAGACTGAGGTCGGCCTCGGTATGGAAAAGGCCGACCCTAGCTCCGGAGGCTGTTGCGAGCGGAAAGTGCCGAATCAGATTGAGGTCGGCCTCGGTATGGAAAAGGCCGACCCTAACTCCGGAGGCTGTTGCGAGGTTCCGCATGTCAGCGATGCTGCTGGACTTGACCCAAGGGGACAACCCGCGGAGGAACTGGAATCTGTACCACTAACGTCTGAGGAAAGGAGAGTGAACATCGGCACCAAATTGGGGGCTGAGCAGAGGGGCAGACTGGTTGGTTTCTTGAGGGCTAATGCGGATCTGTTTGCATGGTCACACGAGGATATGCCGGGAATTGACCCGGGAGTGATGGTTCACCAGTTGAACGTGAATAGGGATTTCAAGCCAGTAAAACAGAGGCGAAGAGCATTTAATTCGGAGAGGAACGAGGTTGTAGCCAGTCAAGTGGATGAGCTACTTAAAGCAGGGTTCATCCGAGAAGTTCATTATCCCCAATGGTTGTCCAATGTGGTACTGGTAAAGAAGGCTAACGGGAAGTGGCGGATGTGCATCGACTTCACCGACCTGAATAAGGCGTGCCCAAAGGACAGTTATCCTTTGCCCATGATCGACCAGTTGGTTGACGCAACAGCAGGGCACGAGATGCTGAGTTTTATGGATGCATATTCAGGGTACAACCAGATTAGAATGCACGAGCCCGATCAGGAAAAGACTTCATTCATCACCAGCCGAGGGTTGTATTGCTATAAGGTCATGCCGTTCGGTTTGAAGAACGCTGGGGCGACATACCAGCGAATGGTAAACCGCATGTTTGCTCCGTTACTGGGAAAGAACATGGAGGTGTACGTGGATGATATGCTGGTAAAGAGCTTGAAGTCTCAATGCCATGAGTCTGACCTTAATGAAGCTTTCCAGATCCTCCGGAAGTATCGAATGAAACTAAACCCGAGTAAGTGCGCTTTTGGGGTGACATCAGGAAAATTCCTAGGATTCATGGTGCATCAGAGGGGGATAGAGGCAGAACCACTAGCAACTATAACCGAAAAGAAGGTCACTGACTTTGTATGGAAGAATATTGTGTGCCGTTTTGGGATCCCTAACACCATTATATCAGATAATGGTAGGCAGTTCGACAATGCCGCTTTCAGGAAGTTTTGCTCAGATTTGGGTATAGCACATCGTTGTTCATCCCCAGCCCATCCGCAAGCTAACGGCCAGGTGGAGGCTGTGAATAAAATAATCAAGCAGAATCTTAAAACAAAGCTTGAAGGACTAAAAGGGGCATGGGCCGAAGAGCTCCCACGTGTACTGTGGGCGTATCGGACAACAGCACGAACCTCAACAGGAGAAACACTATTTTCCCTTTCATTCGGGGCAGAGGCGGTAGTCCCAGTGGAGGTCGGCATCCCCTCCCCCAGGACAGAACAGTTTAGTGTGCAAGGGAATGATGAAGCAGTGAGGTTGAACCTGGACCTCCTAGACGAGCATCGTGAAATGGCTCAACTCCGGGTCGCAGAGTATAAAAATAGGGTTGCCAGATATTATAACGCAAGAGTGAAAAGGCGCACCTTCAAAGAAGGAGACCTAGTACTGAGGAAAGTTATGCAAAACACCAGAGATCCCAATGCAGGTGCGTTGGGACCAGCATGGGAAGGACCTTATCAAGTTAGCAAAGTGGTCCGCCCCGGCACCTATGCCTTGGTTGATGAAAACGGGAAACCAACTCCACACCCATGGAATGCAGAACACTTGAAGATTTACTATCAGTAG

Protein sequence

MTHQEEEGKIDGNSVHRINMQCRLQQKVPKKLVDPGSFSIPCNFGTYSCRALCDLGASINIIPLSLCKKLNIGEIKSISDRLQLADQSVVSPYGIVKNVLIKWPAIGSRRSSAAGGRPTLKKKNKKKDDEVILDHTDGQGADEDNRAEAGPKDQPRGRLDQQVGPKWPDPYGRPRPFAEADHSARLRGPSPVTSIRSLMPRIASVSPGSSRNTTEFLKTLGGQTASPRFSDLGIGGGVAYTTPVCSGFCWSCSWRRLWGRVLASSDRASVVFCRMNRVQKLEGHLGYGQEASNQTEVGLGMEKADPNSGGCYEQEAPNQTEVGLGMEKADPSSGGCCERKVPNQIEVGLGMEKADPNSGGCCEVPHVSDAAGLDPRGQPAEELESVPLTSEERRVNIGTKLGAEQRGRLVGFLRANADLFAWSHEDMPGIDPGVMVHQLNVNRDFKPVKQRRRAFNSERNEVVASQVDELLKAGFIREVHYPQWLSNVVLVKKANGKWRMCIDFTDLNKACPKDSYPLPMIDQLVDATAGHEMLSFMDAYSGYNQIRMHEPDQEKTSFITSRGLYCYKVMPFGLKNAGATYQRMVNRMFAPLLGKNMEVYVDDMLVKSLKSQCHESDLNEAFQILRKYRMKLNPSKCAFGVTSGKFLGFMVHQRGIEAEPLATITEKKVTDFVWKNIVCRFGIPNTIISDNGRQFDNAAFRKFCSDLGIAHRCSSPAHPQANGQVEAVNKIIKQNLKTKLEGLKGAWAEELPRVLWAYRTTARTSTGETLFSLSFGAEAVVPVEVGIPSPRTEQFSVQGNDEAVRLNLDLLDEHREMAQLRVAEYKNRVARYYNARVKRRTFKEGDLVLRKVMQNTRDPNAGALGPAWEGPYQVSKVVRPGTYALVDENGKPTPHPWNAEHLKIYYQ

Homology

[Close]

BLAST of Lag0041303.1 vs. NCBI nr
Match: XP_012853648.1 (PREDICTED: uncharacterized protein LOC105973174 [Erythranthe guttata])

HSP 1 Score: 623.6 bits (1607), Expect = 2.6e-174
Identity = 309/545 (56.70%), Postives = 386/545 (70.83%), Query Frame = 0


Query: 381  EELESVPLT--SEERRVNIGTKLGAEQRGRLVGFLRANADLFAWSHEDMPGIDPGVMVHQ 440
            EEL+SV L    +++ + +GT L  E   RLV FLR N D+FAW  ED+ GI P  +VH+
Sbjct: 833  EELKSVELIPGDQDKLLRVGTNLEPEAETRLVEFLRKNGDVFAWRAEDLEGIPPSKIVHR 892

Query: 441  LNVNRDFKPVKQRRRAFNSERNEVVASQVDELLKAGFIREVHYPQWLSNVVLVKKANGKW 500
            L+V+   KPVKQ++R F  ERN+ +  +VD+LL AG IR V YP+WLSNVVLV K+ GKW
Sbjct: 893  LDVDPKLKPVKQKKRTFGPERNKHIKEEVDKLLAAGQIRPVQYPEWLSNVVLVAKSGGKW 952

Query: 501  RMCIDFTDLNKACPKDSYPLPMIDQLVDATAGHEMLSFMDAYSGYNQIRMHEPDQEKTSF 560
            R+C+DFT+LNKACPKD +PLP IDQLVD+T+G E+LSF+DAY GYNQI++   DQEK SF
Sbjct: 953  RLCVDFTNLNKACPKDPFPLPRIDQLVDSTSGCELLSFLDAYQGYNQIQLAPEDQEKASF 1012

Query: 561  ITSRGLYCYKVMPFGLKNAGATYQRMVNRMFAPLLGKNMEVYVDDMLVKSLKSQCHESDL 620
            IT +G+YCYKVMPFGLKNAGATYQR+VN MFA L+G+NMEVY+DDMLVKS K++ H  DL
Sbjct: 1013 ITDQGIYCYKVMPFGLKNAGATYQRLVNTMFANLIGRNMEVYIDDMLVKSAKAENHLKDL 1072

Query: 621  NEAFQILRKYRMKLNPSKCAFGVTSGKFLGFMVHQRG-----------------IEAEPL 680
             E F ILR+Y+MKLNPSKC+FGV  GKFLG+M+ QR                  +EAEPL
Sbjct: 1073 EECFAILREYKMKLNPSKCSFGVKGGKFLGYMISQRASGQRKFLIVAVDYFTKWVEAEPL 1132

Query: 681  ATITEKKVTDFVWKNIVCRFGIPNTIISDNGRQFDNAAFRKFCSDLGIAHRCSSPAHPQA 740
            A I E  V  F+WKN+VCRFGIP  +ISDNG QF  +    +C  L I    +S  +PQA
Sbjct: 1133 AKIAEADVIRFLWKNVVCRFGIPRALISDNGTQFCGSKVADWCEGLSIKQFFTSVGNPQA 1192

Query: 741  NGQVEAVNKIIKQNLKTKLEGLKGAWAEELPRVLWAYRTTARTSTGETLFSLSFGAEAVV 800
            NGQ E  N+ I Q+LK +L   KGAW EELP VLWAYRTT RTSTGE+ F+L++G EAVV
Sbjct: 1193 NGQTEVTNRTILQHLKARLGEAKGAWVEELPSVLWAYRTTPRTSTGESPFNLAYGMEAVV 1252

Query: 801  PVEVGIPSPRTEQFSVQGNDEAVRLNLDLLDEHREMAQLRVAEYKNRVARYYNARVKRRT 860
            P E+G PS R   +S+Q ND A+R +LDL+DE RE A +R+  YK R+AR YN RVK R+
Sbjct: 1253 PAEIGQPSWRISNYSIQHNDLAIRASLDLVDEVREGATMRMEAYKARMARAYNQRVKPRS 1312

Query: 861  FKEGDLVLRKVMQNTRDPNAGALGPAWEGPYQVSKVVRPGTYALVDENGKPTPHPWNAEH 907
            F+ GDLVLR+V  +      G L P WEGPY+V++VV  G Y L   +G   P  WN  +
Sbjct: 1313 FQVGDLVLRRVGISKA---VGKLDPKWEGPYKVTQVVNAGAYRLQHMDGNQVPRTWNIGN 1372

[Close]

BLAST of Lag0041303.1 vs. NCBI nr
Match: XP_024035690.1 (uncharacterized protein LOC112096473 [Citrus clementina])

HSP 1 Score: 508.8 bits (1309), Expect = 9.4e-140
Identity = 343/1109 (30.93%), Postives = 429/1109 (38.68%), Query Frame = 0


Query: 356  PNSG--GCCEVPHVSDAAGLDPRGQPAEELESVPLTSEE--RRVNIGTKLGAEQRGRLVG 415
            PNS   G  EVP        + RG PAE+L SV + +++  + V +G+ L  + R +L+G
Sbjct: 845  PNSASMGEVEVPLDPRVPKDEKRGTPAEDLVSVMICNKDPTKMVKVGSNLPDQHREQLIG 904

Query: 416  FLRANADLFAWSHEDMPGIDPGVMVHQLNVNRDFKPVKQRRRAFNSERNEVVASQVDELL 475
            FLR N D+FAWSH DMPGI P +  H+LNV+   +PVKQ+RRAFN ER + +  +VD LL
Sbjct: 905  FLRKNLDVFAWSHADMPGIPPSIACHKLNVDPHHRPVKQKRRAFNQERYDAIEQEVDRLL 964

Query: 476  KAGFIREVHYPQWLSNVVLVKKANGKWRMCIDFTDLNKACPKDSYPLPMIDQLVDATAGH 535
             AGFIRE  YP+W+SNVVLVKK+NGKWRMC+DFTDLNK+CPKDS+PLP +DQLVDATAGH
Sbjct: 965  AAGFIREAVYPEWVSNVVLVKKSNGKWRMCVDFTDLNKSCPKDSFPLPRVDQLVDATAGH 1024

Query: 536  EMLSFMDAYSGYNQIRMHEPDQEKTSFITSRGLYCYKVMPFGLKNAGATYQRMVNRMFAP 595
            EMLSFMDA+SGYNQI M+EPDQ+KT+FIT+RGLYCYKVMPFGLKNAGATYQR+VN++F  
Sbjct: 1025 EMLSFMDAFSGYNQIPMYEPDQDKTAFITNRGLYCYKVMPFGLKNAGATYQRLVNKVFKQ 1084

Query: 596  LLGKNMEVYVDDMLVKSLKSQCHESDLNEAFQILRKYRMKLNPSKCAFGVTSGKFLGFMV 655
             +G+ MEVY+DDM+ KS+ +  H   L + F ILRK++M+LNP KCAFGVTSGKFLGFMV
Sbjct: 1085 QIGRTMEVYIDDMITKSVYANDHSGHLRDTFNILRKHQMRLNPEKCAFGVTSGKFLGFMV 1144

Query: 656  HQRGI------------------------------------------------------- 715
             QRGI                                                       
Sbjct: 1145 QQRGIEANPDKIQAVLGMKSPSTIKEVQSLAGRIAALSRFISKATDRCKPFFKALKAGRK 1204

Query: 716  ------------------------------------------------------------ 775
                                                                        
Sbjct: 1205 LQWTAECEEAFQKLKEYLVNSPLLAKPKHGEVLLLYLAVSEHATSSVLLREDEDGVQRPI 1264

Query: 776  ------------------------------------------------------------ 835
                                                                        
Sbjct: 1265 YYTSRAMVDAEKRYPATEKLVLALVISARKLRPYFQAHTIVVVTNLPLRQILQKLDMSGR 1324

Query: 836  ------------------------------------------------------------ 895
                                                                        
Sbjct: 1325 LLRWSLELSEFDIIFKPRSAIKAQAIADFIAEFANDSGGEEIPGYPSETTSAIEEEQVWE 1384

Query: 896  ------------------------------------------------------------ 907
                                                                        
Sbjct: 1385 IYVDGSSNSHGSGAGVIIIDPDKVKLCYALQFGFKASNNEAEYEAMIAGLRMSKALGAKR 1444

[Close]

BLAST of Lag0041303.1 vs. NCBI nr
Match: XP_024045974.1 (uncharacterized protein LOC112100756 [Citrus clementina] >XP_024046421.1 uncharacterized protein LOC112100815 [Citrus clementina])

HSP 1 Score: 508.4 bits (1308), Expect = 1.2e-139
Identity = 343/1109 (30.93%), Postives = 428/1109 (38.59%), Query Frame = 0


Query: 356  PNSG--GCCEVPHVSDAAGLDPRGQPAEELESVPLTSEE--RRVNIGTKLGAEQRGRLVG 415
            PNS   G  EVP        + RG PAE+L SV + +++  + V +G+ L  + R +L+G
Sbjct: 864  PNSASMGEVEVPLDPRVPKDEKRGTPAEDLVSVMICNKDPTKMVKVGSNLPDQHREQLIG 923

Query: 416  FLRANADLFAWSHEDMPGIDPGVMVHQLNVNRDFKPVKQRRRAFNSERNEVVASQVDELL 475
            FLR N D+FAWSH DMPGI P +  H+LNV+   +PVKQ+RRAFN ER + +  +VD LL
Sbjct: 924  FLRKNLDVFAWSHADMPGIPPSIACHKLNVDPHHRPVKQKRRAFNQERYDAIEQEVDRLL 983

Query: 476  KAGFIREVHYPQWLSNVVLVKKANGKWRMCIDFTDLNKACPKDSYPLPMIDQLVDATAGH 535
             AGFIRE  YP W+SNVVLVKK+NGKWRMC+DFTDLNK+CPKDS+PLP +DQLVDATAGH
Sbjct: 984  AAGFIREAVYPDWVSNVVLVKKSNGKWRMCVDFTDLNKSCPKDSFPLPRVDQLVDATAGH 1043

Query: 536  EMLSFMDAYSGYNQIRMHEPDQEKTSFITSRGLYCYKVMPFGLKNAGATYQRMVNRMFAP 595
            EMLSFMDA+SGYNQI M+EPDQ+KT+FIT+RGLYCYKVMPFGLKNAGATYQR+VN++F  
Sbjct: 1044 EMLSFMDAFSGYNQISMYEPDQDKTAFITNRGLYCYKVMPFGLKNAGATYQRLVNKVFKQ 1103

Query: 596  LLGKNMEVYVDDMLVKSLKSQCHESDLNEAFQILRKYRMKLNPSKCAFGVTSGKFLGFMV 655
             +G+ MEVY+DDM+ KS+ +  H   L + F ILRK++M+LNP KCAFGVTSGKFLGFMV
Sbjct: 1104 QIGRTMEVYIDDMITKSVYANDHSGHLRDTFNILRKHQMRLNPEKCAFGVTSGKFLGFMV 1163

Query: 656  HQRGI------------------------------------------------------- 715
             QRGI                                                       
Sbjct: 1164 QQRGIEANPDKIQAVLGMKSPSTIKEVQSLAGRIAALSRFISKATDRCKPFFKALKAGKK 1223

Query: 716  ------------------------------------------------------------ 775
                                                                        
Sbjct: 1224 LQWTAECEEAFQKLKEYLVNSPLLAKPKHGEVLLLYLAVSEHATSSVLLREDEDGVQRPI 1283

Query: 776  ------------------------------------------------------------ 835
                                                                        
Sbjct: 1284 YYTSRAMVDAEKRYPATEKLVLALVISARKLRPYFQAHTIVVVTNLPLRQILQKLDMSGR 1343

Query: 836  ------------------------------------------------------------ 895
                                                                        
Sbjct: 1344 LLRWSLELSEFDIIFKPRSAIKAQAIADFIAEFANDSGGEEIPGYPSETTSAIEEEQVWE 1403

Query: 896  ------------------------------------------------------------ 907
                                                                        
Sbjct: 1404 IYVDGSSNSHGSGAGVIIIDPDKVKLCYALQFGFKASNNEAEYEAMIAGLRMSKALGAKR 1463

[Close]

BLAST of Lag0041303.1 vs. NCBI nr
Match: XP_015384470.1 (uncharacterized protein LOC107176464 [Citrus sinensis])

HSP 1 Score: 508.1 bits (1307), Expect = 1.6e-139
Identity = 343/1109 (30.93%), Postives = 428/1109 (38.59%), Query Frame = 0


Query: 356  PNSG--GCCEVPHVSDAAGLDPRGQPAEELESVPLTSEE--RRVNIGTKLGAEQRGRLVG 415
            PNS   G  EVP        + RG PAE+L SV + +++  + V +G+ L  + R +L+G
Sbjct: 864  PNSASMGEVEVPLDPRVPKDEKRGTPAEDLVSVMICNKDPTKMVKVGSNLPDQHREQLIG 923

Query: 416  FLRANADLFAWSHEDMPGIDPGVMVHQLNVNRDFKPVKQRRRAFNSERNEVVASQVDELL 475
            FLR N D+FAWSH DMPGI P +  H+LNV+   +PVKQ+RRAFN ER + +  +VD LL
Sbjct: 924  FLRKNLDVFAWSHADMPGIPPSIACHKLNVDPHHRPVKQKRRAFNQERYDAIEQEVDRLL 983

Query: 476  KAGFIREVHYPQWLSNVVLVKKANGKWRMCIDFTDLNKACPKDSYPLPMIDQLVDATAGH 535
             AGFIRE  YP W+SNVVLVKK+NGKWRMC+DFTDLNK+CPKDS+PLP +DQLVDATAGH
Sbjct: 984  AAGFIREAVYPDWVSNVVLVKKSNGKWRMCVDFTDLNKSCPKDSFPLPRVDQLVDATAGH 1043

Query: 536  EMLSFMDAYSGYNQIRMHEPDQEKTSFITSRGLYCYKVMPFGLKNAGATYQRMVNRMFAP 595
            EMLSFMDA+SGYNQI M+EPDQ+KT+FIT+RGLYCYKVMPFGLKNAGATYQR+VN++F  
Sbjct: 1044 EMLSFMDAFSGYNQIPMYEPDQDKTAFITNRGLYCYKVMPFGLKNAGATYQRLVNKVFKQ 1103

Query: 596  LLGKNMEVYVDDMLVKSLKSQCHESDLNEAFQILRKYRMKLNPSKCAFGVTSGKFLGFMV 655
             +G+ MEVY+DDM+ KS+ +  H   L + F ILRK++M+LNP KCAFGVTSGKFLGFMV
Sbjct: 1104 QIGRTMEVYIDDMITKSVYANDHSGHLRDTFNILRKHQMRLNPEKCAFGVTSGKFLGFMV 1163

Query: 656  HQRGI------------------------------------------------------- 715
             QRGI                                                       
Sbjct: 1164 QQRGIEANPDKIQAVLGMKSPSTIKEVQSLAGRIAALSRFISKATDRCKPFFKALKAGKK 1223

Query: 716  ------------------------------------------------------------ 775
                                                                        
Sbjct: 1224 LQWTAECEEAFQKLKEYLVNSPLLAKPKHGEVLLLYLAVSEHATSSVLLREDEDGVQRPI 1283

Query: 776  ------------------------------------------------------------ 835
                                                                        
Sbjct: 1284 YYTSRAMVDAEKRYPATEKLVLALVISARKLRPYFQAHTIVVVTNLPLRQILQKLDMSGR 1343

Query: 836  ------------------------------------------------------------ 895
                                                                        
Sbjct: 1344 LLRWSLELSEFDIIFKPRSAIKAQAIADFIAEFANDSGGEEIPGYPSETTSAIEEEQVWE 1403

Query: 896  ------------------------------------------------------------ 907
                                                                        
Sbjct: 1404 IYVDGSSNSHGSGAGVIIIDPDKVKLCYALQFGFKASNNEAEYEAMIAGLRMSKALGAKR 1463

[Close]

BLAST of Lag0041303.1 vs. NCBI nr
Match: XP_021827212.1 (uncharacterized protein LOC110767855 [Prunus avium])

HSP 1 Score: 506.5 bits (1303), Expect = 4.7e-139
Identity = 347/1102 (31.49%), Postives = 425/1102 (38.57%), Query Frame = 0


Query: 365  PHVSDAAGLDPR-------GQPAEELESVPLTSE--ERRVNIGTKLGAEQRGRLVGFLRA 424
            P  ++A+ LDPR        +P EELE + +  +  E+ + IGT++    R  LV FL A
Sbjct: 718  PAPAEASELDPREGIDPVNPKPVEELEKIAVYPDHPEQFLQIGTRMTTVVRESLVKFLEA 777

Query: 425  NADLFAWSHEDMPGIDPGVMVHQLNVNRDFKPVKQRRRAFNSERNEVVASQVDELLKAGF 484
            N D+FAW+HEDM GI+P ++ H+L+++   KPVKQ+RR++++ R E +  +VD+L K GF
Sbjct: 778  NLDVFAWTHEDMTGINPEIITHRLSIDPHHKPVKQKRRSYDTTRYEAMRDEVDKLEKNGF 837

Query: 485  IREVHYPQWLSNVVLVKKANGKWRMCIDFTDLNKACPKDSYPLPMIDQLVDATAGHEMLS 544
            IREV+YP+WLSNVV+V+K  GKWRMC+DFTDLNKACPKDS+PLP IDQLVDATAGHE+LS
Sbjct: 838  IREVNYPKWLSNVVMVRKTEGKWRMCVDFTDLNKACPKDSFPLPRIDQLVDATAGHELLS 897

Query: 545  FMDAYSGYNQIRMHEPDQEKTSFITSRGLYCYKVMPFGLKNAGATYQRMVNRMFAPLLGK 604
            FMDAYSGYNQI MH  DQE TSFIT RG YCY+VMPFGLKNAGATYQR+VNRMF+  +GK
Sbjct: 898  FMDAYSGYNQIHMHPDDQESTSFITDRGTYCYQVMPFGLKNAGATYQRLVNRMFSEQIGK 957

Query: 605  NMEVYVDDMLVKSLKSQCHESDLNEAFQILRKYRMKLNPSKCAFGVTSGKFLGFMVHQRG 664
            +MEVYVDDMLVKS++++ H +DL   F ILR Y MKLNP+KCAFGV SGKFLGFMV  RG
Sbjct: 958  SMEVYVDDMLVKSIRAEHHTTDLTTTFNILRHYGMKLNPTKCAFGVGSGKFLGFMVSHRG 1017

Query: 665  I----------------------------------------------------------- 724
            I                                                           
Sbjct: 1018 IEANPEKIQALINMTPPRTRKEVQSLTGRIASLNRFISKSTDRCLPFFKILRGSGKEIIW 1077

Query: 725  ------------------------------------------------------------ 784
                                                                        
Sbjct: 1078 TESCTAAFDNLREHMGRAPILSKPEIGDTLSLYVSASLSAVSSVLTRDDNGTQRPVYYVS 1137

Query: 785  ------------------------------------------------------------ 844
                                                                        
Sbjct: 1138 RALLDVETRYPDIEKLALALVVSARKLRPYFQAHPIRILTDQPLQQVLRKPETSGRLVKW 1197

Query: 845  ------------------------------------------------------------ 904
                                                                        
Sbjct: 1198 AIELGEFDIEYRPRTTIKAQALADFISEFTLAPSTQGKNTPLPDPIEEANHHWILYVDGA 1257

Query: 905  ------------------------------------------------------------ 907
                                                                        
Sbjct: 1258 SNSQGCGAGLVLISPHATEVEYALRFGFRASNNEAEYEALIAGLRLAKELGAKKIQVRSD 1317

[Close]

BLAST of Lag0041303.1 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.4e-29
Identity = 77/229 (33.62%), Postives = 116/229 (50.66%), Query Frame = 0


Query: 437 HQLNVNRDFKPVKQRRRAFNSERNEVVASQVDELLKAGFIREVHYPQWLSNVVLVKKAN- 496
           H LN   +  P+  ++          V +QV E+L  G IRE + P      V+ KK + 
Sbjct: 197 HVLNTTHN-SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDA 256

Query: 497 ---GKWRMCIDFTDLNKACPKDSYPLPMIDQLVDATAGHEMLSFMDAYSGYNQIRMHEPD 556
               K+R+ ID+  LN+    D YP+P +D+++      +  + +D   G++QI M E  
Sbjct: 257 SGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEES 316

Query: 557 QEKTSFITSRGLYCYKVMPFGLKNAGATYQRMVNRMFAPLLGKNMEVYVDDMLVKSLKSQ 616
             KT+F T  G Y Y  MPFGL+NA AT+QR +N +  PLL K+  VY+DD+++ S    
Sbjct: 317 ISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLT 376

Query: 617 CHESDLNEAFQILRKYRMKLNPSKCAFGVTSGKFLGFMVHQRGIEAEPL 662
            H + +   F  L    +KL   KC F      FLG +V   GI+  P+
Sbjct: 377 EHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPI 424

[Close]

BLAST of Lag0041303.1 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.7e-28
Identity = 86/289 (29.76%), Postives = 140/289 (48.44%), Query Frame = 0


Query: 378 QPAEELESVPLTSEERRVNIGTKLGAE----QRGRLVGFLRANADLFAWSHEDMPGIDPG 437
           +P      V   SE R   + ++L        + +L        D+FA   E  P     
Sbjct: 244 EPLSNYNVVQANSEHRNKTVLSQLKKNFPELFKSQLENICSEYIDIFALESE--PITVNN 303

Query: 438 VMVHQLNVNRDFKPVKQRRRAFNSERNEVVASQVDELLKAGFIREVHYPQWLSNVVLVKK 497
           +   QL + +D +PV  +       + E + +QV +L+K   + E    Q+ S ++LV K
Sbjct: 304 LYKQQLRL-KDDEPVYTKNYRSPHSQVEEIQAQVQKLIKDKIV-EPSVSQYNSPLLLVPK 363

Query: 498 ANG------KWRMCIDFTDLNKACPKDSYPLPMIDQLVDATAGHEMLSFMDAYSGYNQIR 557
            +       KWR+ ID+  +NK    D +PLP ID ++D     +  S +D  SG++QI 
Sbjct: 364 KSSPNSDKKKWRLVIDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIE 423

Query: 558 MHEPDQEKTSFITSRGLYCYKVMPFGLKNAGATYQRMVNRMFAPLLGKNMEVYVDDMLVK 617
           + E  ++ TSF TS G Y +  +PFGLK A  ++QRM+   F+ +      +Y+DD++V 
Sbjct: 424 LDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMMTIAFSGIEPSQAFLYMDDLIVI 483

Query: 618 SLKSQCHESDLNEAFQILRKYRMKLNPSKCAFGVTSGKFLGFMVHQRGI 657
               +    +L E F   R+Y +KL+P KC+F +    FLG     +GI
Sbjct: 484 GCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGI 528

HSP 2 Score: 55.8 bits (133), Expect = 2.9e-06
Identity = 47/234 (20.09%), Postives = 96/234 (41.03%), Query Frame = 0


Query: 658  AEPLATITEKKVTDFVWKNIVCRFGIPNTIISDNGRQFDNAAFRKFCSDLGIAHRCSSPA 717
            A P+A  + K V   ++++ + ++G   T I+D G ++ N+     C  L I +  S+  
Sbjct: 999  AIPIANKSAKTVAKAIFESFILKYGPMKTFITDMGTEYKNSIITDLCKYLKIKNITSTAH 1058

Query: 718  HPQANGQVEAVNKIIKQNLKTKLEGLKGAWAEELPRVLWAYRTTARTSTGETLFSLSFGA 777
            H Q  G VE  ++ + + +++ +   K  W   L   ++ + TT         + L FG 
Sbjct: 1059 HHQTVGVVERSHRTLNEYIRSYISTDKTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGR 1118

Query: 778  EAVVPVEVGIPSPRTEQFSVQGNDEAVRLNLDLLDEHREMAQLRVAEYKNRVARYYNARV 837
             + +P            +++   D+  + +   L+     A+  +  +K +    Y+ +V
Sbjct: 1119 TSNLPKHFNKLHSIEPIYNI---DDYAKESKYRLEVAYARARKLLEAHKEKNKENYDLKV 1178

Query: 838  KRRTFKEGDLVLRKVMQNTRDPNAGALGPAWEGPYQVSKVVRPGTYALVDENGK 892
            K    + GD VL       R+     L   + GPY++  +       L+    K
Sbjct: 1179 KDIELEVGDKVL------LRNEVGHKLDFKYTGPYKIESIGDNNNITLLTNKNK 1223

[Close]

BLAST of Lag0041303.1 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.3e-27
Identity = 75/204 (36.76%), Postives = 112/204 (54.90%), Query Frame = 0


Query: 463 VASQVDELLKAGFIREVHYPQ----WLSNVVLVKKANG--KWRMCIDFTDLNKACPKDSY 522
           V  Q+DELL+ G IR  + P     W+  V    K NG  ++RM +DF  LN     D+Y
Sbjct: 139 VERQIDELLQDGIIRPSNSPYNSPIWI--VPKKPKPNGEKQYRMVVDFKRLNTVTIPDTY 198

Query: 523 PLPMIDQLVDATAGHEMLSFMDAYSGYNQIRMHEPDQEKTSFITSRGLYCYKVMPFGLKN 582
           P+P I+  + +    +  + +D  SG++QI M E D  KT+F T  G Y +  +PFGLKN
Sbjct: 199 PIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKN 258

Query: 583 AGATYQRMVNRMFAPLLGKNMEVYVDDMLVKSLKSQCHESDLNEAFQILRKYRMKLNPSK 642
           A A +QRM++ +    +GK   VY+DD++V S     H  +L      L K  +++N  K
Sbjct: 259 APAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEK 318

Query: 643 CAFGVTSGKFLGFMVHQRGIEAEP 661
             F  T  +FLG++V   GI+A+P
Sbjct: 319 SHFLDTQVEFLGYIVTADGIKADP 340

[Close]

BLAST of Lag0041303.1 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 125.9 bits (315), Expect = 2.3e-27
Identity = 72/196 (36.73%), Postives = 110/196 (56.12%), Query Frame = 0


Query: 457 SERNEVVASQ-VDELLKAGFIREVHYPQWLSNVVLVKKANGKWRMCIDFTDLNKACPKDS 516
           +E+NE   ++ V +LL   FI     P   S VVLV K +G +R+C+D+  LNKA   D 
Sbjct: 605 TEKNEQEINKIVQKLLDNKFIVPSKSP-CSSPVVLVPKKDGTFRLCVDYRTLNKATISDP 664

Query: 517 YPLPMIDQLVDATAGHEMLSFMDAYSGYNQIRMHEPDQEKTSFITSRGLYCYKVMPFGLK 576
           +PLP ID L+      ++ + +D +SGY+QI M   D+ KT+F+T  G Y Y VMPFGL 
Sbjct: 665 FPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLV 724

Query: 577 NAGATYQRMVNRMFAPLLGKNMEVYVDDMLVKSLKSQCHESDLNEAFQILRKYRMKLNPS 636
           NA +T+ R +   F  L  + + VY+DD+L+ S   + H   L+   + L+   + +   
Sbjct: 725 NAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKK 784

Query: 637 KCAFGVTSGKFLGFMV 652
           KC F     +FLG+ +
Sbjct: 785 KCKFASEETEFLGYSI 797

[Close]

BLAST of Lag0041303.1 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 2.3e-27
Identity = 72/196 (36.73%), Postives = 110/196 (56.12%), Query Frame = 0


Query: 457 SERNEVVASQ-VDELLKAGFIREVHYPQWLSNVVLVKKANGKWRMCIDFTDLNKACPKDS 516
           +E+NE   ++ V +LL   FI     P   S VVLV K +G +R+C+D+  LNKA   D 
Sbjct: 631 TEKNEQEINKIVQKLLDNKFIVPSKSP-CSSPVVLVPKKDGTFRLCVDYRTLNKATISDP 690

Query: 517 YPLPMIDQLVDATAGHEMLSFMDAYSGYNQIRMHEPDQEKTSFITSRGLYCYKVMPFGLK 576
           +PLP ID L+      ++ + +D +SGY+QI M   D+ KT+F+T  G Y Y VMPFGL 
Sbjct: 691 FPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLV 750

Query: 577 NAGATYQRMVNRMFAPLLGKNMEVYVDDMLVKSLKSQCHESDLNEAFQILRKYRMKLNPS 636
           NA +T+ R +   F  L  + + VY+DD+L+ S   + H   L+   + L+   + +   
Sbjct: 751 NAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKK 810

Query: 637 KCAFGVTSGKFLGFMV 652
           KC F     +FLG+ +
Sbjct: 811 KCKFASEETEFLGYSI 823

[Close]

BLAST of Lag0041303.1 vs. ExPASy TrEMBL
Match: A0A2N9HY45 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44897 PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 2.0e-172
Identity = 319/666 (47.90%), Postives = 396/666 (59.46%), Query Frame = 0


Query: 400  KLGAEQRGR----LVGFLRANADLFAWSHEDMPGIDPGVMVHQLNVNRDFKPVKQRRRAF 459
            ++G +  GR    LV FLR N D+FAW+HEDMPGIDP V+ H+LNV+    P+KQ+RR F
Sbjct: 489  RVGGDYVGRMKKALVEFLRGNIDVFAWTHEDMPGIDPSVICHKLNVDTSTHPIKQKRRVF 548

Query: 460  NSERNEVVASQVDELLKAGFIREVHYPQWLSNVVLVKKANGKWRMCIDFTDLNKACPKDS 519
              +RN+ ++ +V +LL AGFI+EV+YP WL+NVV+VKK+NGKWRMC+DFTDLNKACPKDS
Sbjct: 549  ALDRNQAISDEVGKLLTAGFIKEVYYPDWLANVVMVKKSNGKWRMCVDFTDLNKACPKDS 608

Query: 520  YPLPMIDQLVDATAGHEMLSFMDAYSGYNQIRMHEPDQEKTSFITSRGLYCYKVMPFGLK 579
            +PL  IDQLVD+TAGH++L+FMDA+SGYNQI M + DQEKTSFITS+GL+CY+VMPFGLK
Sbjct: 609  FPLSRIDQLVDSTAGHKLLTFMDAFSGYNQIMMDKDDQEKTSFITSKGLFCYRVMPFGLK 668

Query: 580  NAGATYQRMVNRMFAPLLGKNMEVYVDDMLVKSLKSQCHESDLNEAFQILRKYRMKLNPS 639
            NAGATYQR++N+MF   + +N+EVY+DDMLVK+     H  DL E F+ LR+YRMKLNPS
Sbjct: 669  NAGATYQRLMNKMFHNQIERNVEVYIDDMLVKTKDKNRHLDDLEETFKTLRQYRMKLNPS 728

Query: 640  KCAFGVTSGKFLGFMVHQRGIEAEP----------------------------------- 699
            KC FGV+SGKFLGFMV QRGIEA P                                   
Sbjct: 729  KCIFGVSSGKFLGFMVSQRGIEANPDKIKAILEMTPPKIVKEVQSLTGRVAALNRFVSRA 788

Query: 700  ------------------------------------------------------------ 759
                                                                        
Sbjct: 789  TDKCLPFFKTLKKAFTWTDECQNSFEELKMHLTSPLLLSPSKQGEPLSLYLAVSPTAVSS 848

Query: 760  -----------------LATITEKKVTDFVWKNIVCRFGIPNTIISDNGRQFDNAAFRKF 819
                             L TITEK +  FVWK I+CRFGIP   ISDNGRQF+N+ FR+F
Sbjct: 849  ALIREEDGVQLPVEAKLLTTITEKNIRGFVWKVIICRFGIPRAFISDNGRQFNNSPFREF 908

Query: 820  CSDLGIAHRCSSPAHPQANGQVEAVNKIIKQNLKTKLEGLKGAWAEELPRVLWAYRTTAR 879
            C +LGI +  SSP HPQANG+VE  N+ + + +KT+L+G KG W +EL  VLWAY TTAR
Sbjct: 909  CEELGIHNHYSSPGHPQANGRVEVTNRSLLKIIKTQLKGAKGLWPKELLNVLWAYSTTAR 968

Query: 880  TSTGETLFSLSFGAEAVVPVEVG---------------------------IPSPRTE--- 908
            T TGETLF L+FG EAV+PVE+G                            PSP      
Sbjct: 969  TPTGETLFQLTFGTEAVIPVEIGSRRVGLIKAGRGQYPLPPRPGDRGKSLAPSPPRHLMG 1028

[Close]

BLAST of Lag0041303.1 vs. ExPASy TrEMBL
Match: A0A2N9GGN7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26333 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 1.4e-160
Identity = 327/809 (40.42%), Postives = 411/809 (50.80%), Query Frame = 0


Query: 378  QPAEELESVPLTS--EERRVNIGTKLGAEQRGRLVGFLRANADLFAWSHEDMPGIDPGVM 437
            +P+ EL++V L     ER   +G  L  E +  LV FL+ N D+FAWSHEDMPGI+P ++
Sbjct: 690  KPSGELDTVELEDGRPERTTKVGADLPPEMKESLVQFLKDNKDVFAWSHEDMPGINPSII 749

Query: 438  VHQLNVNRDFKPVKQRRRAFNSERNEVVASQVDELLKAGFIREVHYPQWLSNVVLVKKAN 497
             H+LNV+   +P+KQ++R F  ERN+ +  +VD+LL A FIREV+YP WL+NVV+VKK+ 
Sbjct: 750  SHKLNVDPSLRPIKQKQRVFALERNKAIMEEVDKLLAANFIREVYYPDWLANVVMVKKST 809

Query: 498  GKWRMCIDFTDLNKACPKDSYPLPMIDQLVDATAGHEMLSFMDAYSGYNQIRMHEPDQEK 557
            GKWRMC+DFTDLNKACPKDS+PLP IDQLVD+TAGH++L+FMDA+SGYNQI M E DQEK
Sbjct: 810  GKWRMCVDFTDLNKACPKDSFPLPRIDQLVDSTAGHKLLTFMDAFSGYNQIVMDEDDQEK 869

Query: 558  TSFITSRGLYCYKVMPFGLKNAGATYQRMVNRMFAPLLGKNMEVYVDDMLVKSLKSQCHE 617
            TSFITSRGL+CYKVMPFGLKNAGATYQR++NRMF   +G+N+EVYVD+MLVKS +   H 
Sbjct: 870  TSFITSRGLFCYKVMPFGLKNAGATYQRLMNRMFHDQIGRNVEVYVDNMLVKSKEEDDHL 929

Query: 618  SDLNEAFQILRKYRMKLNPSKCAFGVTSGKFLGFMVHQRGIEAEP--------------- 677
             DL E FQ LRKY+MKLNPSKCAFGV SGKFLGFMV QRGIEA P               
Sbjct: 930  DDLRETFQTLRKYQMKLNPSKCAFGVYSGKFLGFMVSQRGIEANPDKIKAILEMQPPKNT 989

Query: 678  ------------------------------------------------------------ 737
                                                                        
Sbjct: 990  KERPKTDRKSSCIESAFEWTDECQRAFEELKKYLTTPPLLSPSKQGEELYLYLAVSPTAV 1049

Query: 738  ------------------------------------------------------------ 797
                                                                        
Sbjct: 1050 SSALIREEERRQLPVYYTSRALRGAEERYPPMEKLAFALVTAARKLRPYFQAHTIVLFTN 1109

Query: 798  --------------------------------------------LATITEK--KVTDFVW 857
                                                        +A  T K  + T+ V 
Sbjct: 1110 HPLRIAMNKPDAAGRLIQWSIELSEFDIDYRPRTAIKAQALADFIAEFTSKDDEPTEDVE 1169

Query: 858  KNIVC------------------------------------------------------- 907
            + + C                                                       
Sbjct: 1170 RTLRCLAPDEAKLRYEEKIHEGVCGDHSGARALQRKIVRAGYYWPSMKADACQFVQRCDK 1229

[Close]

BLAST of Lag0041303.1 vs. ExPASy TrEMBL
Match: A0A2N9H0M9 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33073 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 7.5e-159
Identity = 332/878 (37.81%), Postives = 415/878 (47.27%), Query Frame = 0


Query: 378  QPAEELESVPLTS--EERRVNIGTKLGAEQRGRLVGFLRANADLFAWSHEDMPGIDPGVM 437
            +P+ EL+++ L     ER   IG  L  + R  LV FL+ N D+FAWSHEDMPGI+P ++
Sbjct: 660  KPSGELDTIELEDGRPERTTKIGANLPPKMRESLVQFLKDNKDVFAWSHEDMPGINPSII 719

Query: 438  VHQLNVNRDFKPVKQRRRAFNSERNEVVASQVDELLKAGFIREVHYPQWLSNVVLVKKAN 497
             H+LNV+   +PVKQ+RR F  ERN  +  +VD+LL A FIREV YP WL+NVV+VKK+ 
Sbjct: 720  SHKLNVDPSLRPVKQKRRVFAPERNNAIMEEVDKLLAANFIREVFYPDWLANVVMVKKST 779

Query: 498  GKWRMCIDFTDLNKACPKDSYPLPMIDQLVDATAGHEMLSFMDAYSGYNQIRMHEPDQEK 557
            GKWRMC+DFTDLNKACPKDS+PLP IDQ VD+TAGH++L+FMDA+SGYNQI + + DQEK
Sbjct: 780  GKWRMCVDFTDLNKACPKDSFPLPRIDQQVDSTAGHKLLTFMDAFSGYNQIVLDKSDQEK 839

Query: 558  TSFITSRGLYCYKVMPFGLKNAGATYQRMVNRMFAPLLGKNMEVYVDDMLVKSLKSQCHE 617
            TSFITSRGL+CYKVMPFGLKNAGATYQR++NRMF   +G+N+EVYVDDMLVKS +   H 
Sbjct: 840  TSFITSRGLFCYKVMPFGLKNAGATYQRLMNRMFHDQIGRNVEVYVDDMLVKSKEEDGHL 899

Query: 618  SDLNEAFQILRKYRMKLNPSKCAFGVTSGKFLGFMVHQRGI------------------- 677
             DL E F+ LRKY+MKLNPSKCAFGV SGKFLGFMV QRGI                   
Sbjct: 900  DDLRETFETLRKYQMKLNPSKCAFGVYSGKFLGFMVSQRGIEANPDKIKAILEMQPPKTT 959

Query: 678  ------------------------------------------------------------ 737
                                                                        
Sbjct: 960  KEVQRLTGRVAALNRFMSRSTDKCLPFFKTLKKAFVWTDECQQAFEELKRYLTEPPLLSP 1019

Query: 738  ------------------------------------------------------------ 797
                                                                        
Sbjct: 1020 SKQDEELYLYLAVSPTAVTIKAQTLADFIAEFTLKDDEPTEDVEQTSKWTVNIDGSSTKD 1079

Query: 798  ------------------------------------------------------------ 857
                                                                        
Sbjct: 1080 AGGVGIVLKSPEGDTLKQAVRLQYPTTNNEAEYEALLTGLKMAKTLGATEIDVLSDSQLV 1139

Query: 858  ------------------------------------------------------------ 907
                                                                        
Sbjct: 1140 VGQVNGDYEAKEGRMQQYLHLVQHQISQFREVRLSRIPREQNTEADQLAKSASSPTVDGK 1199

[Close]

BLAST of Lag0041303.1 vs. ExPASy TrEMBL
Match: A0A2N9HHE1 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41589 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 1.4e-157
Identity = 351/991 (35.42%), Postives = 422/991 (42.58%), Query Frame = 0


Query: 378  QPAEELESVPLT--SEERRVNIGTKLGAEQRGRLVGFLRANADLFAWSHEDMPGIDPGVM 437
            +P E+LE + LT  +E+R+  IGT + AE RG +V FLR NAD+FAWSHEDMPGI   VM
Sbjct: 429  EPTEKLEEITLTEGNEKRKTRIGTTMPAEIRGSIVQFLRENADVFAWSHEDMPGISTEVM 488

Query: 438  VHQLNVNRDFKPVKQRRRAFNSERNEVVASQVDELLKAGFIREVHYPQWLSNVVLVKKAN 497
            VH+LNVN    P+KQ+RR F  ERN  V ++VD+LL AGFIREV+YP+WL+NVV+VKK N
Sbjct: 489  VHKLNVNPSMHPIKQKRRVFAPERNAAVMAEVDKLLTAGFIREVYYPEWLANVVMVKKPN 548

Query: 498  GKWRMCIDFTDLNKACPKDSYPLPMIDQLVDATAGHEMLSFMDAYSGYNQIRMHEPDQEK 557
            GKWRMC+DFTDLNKACPKDSYPLP IDQLVD+TAGH++LSFMDA+SGYNQIRM E DQEK
Sbjct: 549  GKWRMCVDFTDLNKACPKDSYPLPRIDQLVDSTAGHKLLSFMDAFSGYNQIRMEEEDQEK 608

Query: 558  TSFITSRGLYCYKVMPFGLKNAGATYQRMVNRMFAPLLGKNMEVYVDDMLVKSLKSQCHE 617
            T+FITSRGL+CYKVMPFGLKNAGATYQR+VN+MF   +G+N+EVYVDDMLVKS +++ H 
Sbjct: 609  TAFITSRGLFCYKVMPFGLKNAGATYQRLVNKMFHDQIGRNVEVYVDDMLVKSKENEDHL 668

Query: 618  SDLNEAFQILRKYRMKLNPSKCAFGVTSGKFLGFMVHQRGI------------------- 677
            +DL E FQ LR Y MKLNP KCAFGV+SGKFLGFMV QRGI                   
Sbjct: 669  TDLKETFQALRTYNMKLNPEKCAFGVSSGKFLGFMVSQRGIEANPDKIKAILEMSPPTTV 728

Query: 678  ------------------------------------------------------------ 737
                                                                        
Sbjct: 729  KEVQSLTEKAAALNRFVSRSTDKCLPFFKILRKAFQWTEECQHAFEELKVYLSSPPLLSP 788

Query: 738  ------------------------------------------------------------ 797
                                                                        
Sbjct: 789  SKTGEELYLYLAVSSSAVSSALIREEERVQKPVYYTSRALKGAEERYSNMEKLAFALLIR 848

Query: 798  ------------------------------------------------------------ 857
                                                                        
Sbjct: 849  IKETQAIFPGPLNSAQALADFIAEFTHPWEEEGEPEQLEIWTVNIDGSSTKEMGGAGIIL 908

Query: 858  ------------------------------------------------------------ 907
                                                                        
Sbjct: 909  VSPEKDKFEYAIQLRFRATNNEAEYEALLAGLKLSKKMGVKNLTVKSDSQLVIGQIKGEY 968

[Close]

BLAST of Lag0041303.1 vs. ExPASy TrEMBL
Match: A0A2N9ET33 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5900 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 8.6e-155
Identity = 340/966 (35.20%), Postives = 413/966 (42.75%), Query Frame = 0


Query: 378  QPAEELESVPLTSEE--RRVNIGTKLGAEQRGRLVGFLRANADLFAWSHEDMPGIDPGVM 437
            +P EELE + L  E+  +  +IGTK+    R  ++ FL+ N D+FAW+H+DMPGIDP  +
Sbjct: 711  EPTEELEEIVLDDEKPSKTTSIGTKMDRTIREAMISFLKNNLDVFAWTHDDMPGIDPATI 770

Query: 438  VHQLNVNRDFKPVKQRRRAFNSERNEVVASQVDELLKAGFIREVHYPQWLSNVVLVKKAN 497
             H+LNV+   +P KQ+RR F  +RN+ ++ +V++LL AGFIREV YP WL+NVV+VKKAN
Sbjct: 771  CHKLNVDPSIRPTKQKRRVFAPDRNQAISDEVEKLLTAGFIREVFYPDWLANVVMVKKAN 830

Query: 498  GKWRMCIDFTDLNKACPKDSYPLPMIDQLVDATAGHEMLSFMDAYSGYNQIRMHEPDQEK 557
            GKWRMC+DFTDLNKACPKDS+PLP IDQLVD+TAGH +L+FMDA+SGYNQI M E DQEK
Sbjct: 831  GKWRMCVDFTDLNKACPKDSFPLPRIDQLVDSTAGHRLLTFMDAFSGYNQIMMDESDQEK 890

Query: 558  TSFITSRGLYCYKVMPFGLKNAGATYQRMVNRMFAPLLGKNMEVYVDDMLVKSLKSQCHE 617
            TSFITS+GL+CY+VMPFGLKNAGATYQR++N+MF   +G+NMEVYVDDMLVK+     H 
Sbjct: 891  TSFITSKGLFCYRVMPFGLKNAGATYQRLMNKMFHHQIGRNMEVYVDDMLVKTKDDMKHL 950

Query: 618  SDLNEAFQILRKYRMKLNPSKCAFGVTSGKFLGFMVHQRGI------------------- 677
             DL E F+ LR+YRMKLNPSKC FGV+SGKFLGFMV QRGI                   
Sbjct: 951  EDLKETFETLRQYRMKLNPSKCVFGVSSGKFLGFMVSQRGIEANPDKIKAVLEMTPPRST 1010

Query: 678  ------------------------------------------------------------ 737
                                                                        
Sbjct: 1011 KEVQSLTGRVAALNRFVSRATDKCLPFFKTLRKAFVWTDECQQSFEELKRYLTSPPLLSP 1070

Query: 738  ------------------------------------------------------------ 797
                                                                        
Sbjct: 1071 SQQGETLSLYLAVSPTAVSSALIREDGGTQLPVYYTSRAFQGAEDRYPAMEKLALALAMN 1130

Query: 798  ------------------------------------------------------------ 857
                                                                        
Sbjct: 1131 KPDAAGRLIQWAVELSEFDIEYHPRQAIKAQALADFIAEFTVNEDEPSEEKPDEVWEIEI 1190

Query: 858  ------------------------------------------------------------ 908
                                                                        
Sbjct: 1191 DGSSVKGAGGVGIVFKTPEGHLLKHSTRLQYPTTNNEAEYEALLTSLRIAKELGANRLKI 1250

The following BLAST results are available for this feature:

BLAST of Lag0041303.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_012853648.1	2.6e-174	56.70	PREDICTED: uncharacterized protein LOC105973174 [Erythranthe guttata]	[more]
XP_024035690.1	9.4e-140	30.93	uncharacterized protein LOC112096473 [Citrus clementina]	[more]
XP_024045974.1	1.2e-139	30.93	uncharacterized protein LOC112100756 [Citrus clementina] >XP_024046421.1 unchara...	[more]
XP_015384470.1	1.6e-139	30.93	uncharacterized protein LOC107176464 [Citrus sinensis]	[more]
XP_021827212.1	4.7e-139	31.49	uncharacterized protein LOC110767855 [Prunus avium]	[more]

BLAST of Lag0041303.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	2.4e-29	33.62	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P10394	2.7e-28	29.76	Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste...	[more]
Q8I7P9	2.3e-27	36.76	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q99315	2.3e-27	36.73	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.3e-27	36.73	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Lag0041303.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9HY45	2.0e-172	47.90	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44897 PE=4 SV=1	[more]
A0A2N9GGN7	1.4e-160	40.42	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26333 PE=4 SV=1	[more]
A0A2N9H0M9	7.5e-159	37.81	Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33073 PE=4 SV=1	[more]
A0A2N9HHE1	1.4e-157	35.42	Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41589 PE=4 SV=1	[more]
A0A2N9ET33	8.6e-155	35.20	Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5900 PE=4 SV=1	[more]

BLAST of Lag0041303.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 808..828
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 437..576 e-value: 7.0E-67 score: 226.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..192
None	No IPR available	PANTHER	PTHR24559:SF341	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 405..659
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 405..659
None	No IPR available	CDD	cd01647	RT_LTR	coord: 474..651 e-value: 8.7496E-85 score: 267.154
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 40..102 e-value: 1.05217E-8 score: 51.1832
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 516..651 e-value: 7.0E-67 score: 226.8
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 652..823 e-value: 8.5E-40 score: 138.1
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 491..650 e-value: 1.6E-26 score: 93.2
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 472..651 score: 11.335497
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 651..719 e-value: 1.0E-9 score: 38.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 587..790 score: 17.298256
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 17..111 e-value: 1.3E-10 score: 43.0
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 653..769
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 435..662

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0041303	Lag0041303	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0041303.1.exon5	Lag0041303.1.exon5	exon
Lag0041303.1.exon4	Lag0041303.1.exon4	exon
Lag0041303.1.exon3	Lag0041303.1.exon3	exon
Lag0041303.1.exon2	Lag0041303.1.exon2	exon
Lag0041303.1.exon1	Lag0041303.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0041303.1	cds.Lag0041303.1_5	CDS
cds.Lag0041303.1	cds.Lag0041303.1_4	CDS
cds.Lag0041303.1	cds.Lag0041303.1_3	CDS
cds.Lag0041303.1	cds.Lag0041303.1_2	CDS
cds.Lag0041303.1	cds.Lag0041303.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0041303.1	Lag0041303.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding