Lag0040834.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040834.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotransposon protein
Location	chr13: 8846072 .. 8847071 (-)
Sequence length	912
RNA-Seq Expression	Lag0040834.1
Synteny	Lag0040834.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCATGCAGATGGCACCGTCTACTTCGAAAGCCCCTAAACATATCTGGACACCAATGGAAGATGAAGTTTTGGTCCAGTGTCTGTTACATTTGGTTCAGGCAGGTGGATGGCGGGCTGACAATGGGACCTTCAGACCGGGGTACTTGCAACAAGTACATAAGTTGATGAAAGAGAAACTGCCAGGATGCGACATACAAGTAACGCCGAACTTGGAGTCTAGAGTGAGGATCCTAAAAAGGCAATATGGTGCCCTCGTCGAAATGATGGGTCCCACTTGCAGTGGGTTTGGCTGGAATGATGAGCGAAAGTGCATTGAGGCGGAGAAATCGATCTTCGATGATTGGGTTAGGGTAACAATTCAAACTTAATCCATGTACAGTTCATGAATAAAATGTTATACGATCATGTATGTTAATTGTGATAACATGTTGAATACAGGGACACCCACCTGCTCGTGGTCTGAGGAACAAGCCATTTCCCTACTTCGATGACCTAGCAATTGTTTTCGGGAAGGATAGGGCCAATGGAGAAGGTGCTTCGACTCCGAACGAAATGGCCACTGACTTGGATGATGACGTGAACACAGATGTTGAAGATTGTTATGTCCCTTCCCCTCCTATAGTTGAACCTGTGGTAGGTGAAGAATTTTATACCACCCGTTCGAGCAGGAATGACACGCCAGGATCATCACGGGGAAGTAAGAGGAGGCGCACAGTACCAGCAGACGCTGTCGATACATTTCGCACGGAGATGCGTTATGTGTCCACACAAATCGAGAAGATCGCACTCTGGCCTCAACATAAGGATGAAATTGAGTCAGCTCGACGTAAACAATTGTATGGGGAACTACAGTCTATCCCGGGAATGGACATGGACGACTGTTTGCTTGTGGCCGAGACTCTGTTGGCTGATGACAAGAAATTTCGCTCATTCCTCGACTACCCTACTGAATGGAAGTATAAGTGTTGCATGCGTATCTTGGGAAGGCAGCCATGA

mRNA sequence

ATGTTCATGCAGATGGCACCGTCTACTTCGAAAGCCCCTAAACATATCTGGACACCAATGGAAGATGAAGTTTTGGTCCAGTGTCTGTTACATTTGGTTCAGGCAGGTGGATGGCGGGCTGACAATGGGACCTTCAGACCGGGGTACTTGCAACAAGTACATAAGTTGATGAAAGAGAAACTGCCAGGATGCGACATACAAGTAACGCCGAACTTGGAGTCTAGAGTGAGGATCCTAAAAAGGCAATATGGTGCCCTCGTCGAAATGATGGGTCCCACTTGCAGTGGGTTTGGCTGGAATGATGAGCGAAAGTGCATTGAGGCGGAGAAATCGATCTTCGATGATTGGGTTAGGGGACACCCACCTGCTCGTGGTCTGAGGAACAAGCCATTTCCCTACTTCGATGACCTAGCAATTGTTTTCGGGAAGGATAGGGCCAATGGAGAAGGTGCTTCGACTCCGAACGAAATGGCCACTGACTTGGATGATGACGTGAACACAGATGTTGAAGATTGTTATGTCCCTTCCCCTCCTATAGTTGAACCTGTGGTAGGTGAAGAATTTTATACCACCCGTTCGAGCAGGAATGACACGCCAGGATCATCACGGGGAAGTAAGAGGAGGCGCACAGTACCAGCAGACGCTGTCGATACATTTCGCACGGAGATGCGTTATGTGTCCACACAAATCGAGAAGATCGCACTCTGGCCTCAACATAAGGATGAAATTGAGTCAGCTCGACGTAAACAATTGTATGGGGAACTACAGTCTATCCCGGGAATGGACATGGACGACTGTTTGCTTGTGGCCGAGACTCTGTTGGCTGATGACAAGAAATTTCGCTCATTCCTCGACTACCCTACTGAATGGAAGTATAAGTGTTGCATGCGTATCTTGGGAAGGCAGCCATGA

Coding sequence (CDS)

ATGTTCATGCAGATGGCACCGTCTACTTCGAAAGCCCCTAAACATATCTGGACACCAATGGAAGATGAAGTTTTGGTCCAGTGTCTGTTACATTTGGTTCAGGCAGGTGGATGGCGGGCTGACAATGGGACCTTCAGACCGGGGTACTTGCAACAAGTACATAAGTTGATGAAAGAGAAACTGCCAGGATGCGACATACAAGTAACGCCGAACTTGGAGTCTAGAGTGAGGATCCTAAAAAGGCAATATGGTGCCCTCGTCGAAATGATGGGTCCCACTTGCAGTGGGTTTGGCTGGAATGATGAGCGAAAGTGCATTGAGGCGGAGAAATCGATCTTCGATGATTGGGTTAGGGGACACCCACCTGCTCGTGGTCTGAGGAACAAGCCATTTCCCTACTTCGATGACCTAGCAATTGTTTTCGGGAAGGATAGGGCCAATGGAGAAGGTGCTTCGACTCCGAACGAAATGGCCACTGACTTGGATGATGACGTGAACACAGATGTTGAAGATTGTTATGTCCCTTCCCCTCCTATAGTTGAACCTGTGGTAGGTGAAGAATTTTATACCACCCGTTCGAGCAGGAATGACACGCCAGGATCATCACGGGGAAGTAAGAGGAGGCGCACAGTACCAGCAGACGCTGTCGATACATTTCGCACGGAGATGCGTTATGTGTCCACACAAATCGAGAAGATCGCACTCTGGCCTCAACATAAGGATGAAATTGAGTCAGCTCGACGTAAACAATTGTATGGGGAACTACAGTCTATCCCGGGAATGGACATGGACGACTGTTTGCTTGTGGCCGAGACTCTGTTGGCTGATGACAAGAAATTTCGCTCATTCCTCGACTACCCTACTGAATGGAAGTATAAGTGTTGCATGCGTATCTTGGGAAGGCAGCCATGA

Protein sequence

MFMQMAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKEKLPGCDIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHPPARGLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDLDDDVNTDVEDCYVPSPPIVEPVVGEEFYTTRSSRNDTPGSSRGSKRRRTVPADAVDTFRTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWKYKCCMRILGRQP

Homology

[Close]

BLAST of Lag0040834.1 vs. NCBI nr
Match: KAA0050106.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 316.2 bits (809), Expect = 3.0e-82
Identity = 162/299 (54.18%), Postives = 202/299 (67.56%), Query Frame = 0


Query: 5   MAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKEKLPGC 64
           MA + SKA KH WT + DEVLV+CLL LV+ GGWRADNGTF+ GYL QV KLMKEK+ G 
Sbjct: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKILGS 60

Query: 65  DIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHPPAR 124
           +IQVTPNL+SRV+ILK+QY A+ EMMGP CSGFGWN+ERKCIEAEKS+FDDWV+    AR
Sbjct: 61  NIQVTPNLKSRVKILKKQYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVK---TAR 120

Query: 125 GLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDLDDDVNTDVEDCYVPSPPIVEPVV 184
            +                                   +DD++ ++ED  +P+P  +EP  
Sbjct: 121 DIE----------------------------------EDDMDINLEDFDIPNPHGLEPPS 180

Query: 185 GEEFYTTRSSRNDTPGSSRGSKRRRTVPADAVDTFRTEMRYVSTQIEKIALWPQHKDEIE 244
           GE+  +T +S     GSSR SK+RR+   D +DTFR  MR  S +I KIA W + K EIE
Sbjct: 181 GEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIAAWQREKMEIE 240

Query: 245 SARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWKYKCCMRILGRQP 304
           S+  K+LY +LQ+IPGMD+DDCL+VAE+LL D     +FLDYP EWKY+ CMRILGRQP
Sbjct: 241 SSLHKRLYVDLQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP 261

[Close]

BLAST of Lag0040834.1 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 301.6 bits (771), Expect = 7.6e-78
Identity = 150/290 (51.72%), Postives = 190/290 (65.52%), Query Frame = 0


Query: 4   QMAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKEKLPG 63
           +MA + SKA KH WT +EDEVLV+CLL LV+ GGWRADNGTF+ GYL             
Sbjct: 137 EMASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYL------------- 196

Query: 64  CDIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHPPA 123
                            +QY A+ EMMGP CSGFGWN+ +KCIE EK +FDDWV+GHP A
Sbjct: 197 -----------------KQYTAIAEMMGPACSGFGWNEGQKCIEVEKPVFDDWVKGHPNA 256

Query: 124 RGLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPP 183
           +GL NKPFPYF DL +VFG+DRA G    TP EM++       +DD++ ++ED  +P+P 
Sbjct: 257 QGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPH 316

Query: 184 IVEPVVGEEFYTTRSSRNDTPGSSRGSKRRRTVPADAVDTFRTEMRYVSTQIEKIALWPQ 243
            +EP  GE+  +T +S     GSSR SK+RR+   D +DTFR  MR  S +I KIA W +
Sbjct: 317 GLEPPSGEDMPSTPTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQR 376

Query: 244 HKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPT 289
            K EIES+  K+LY ELQ+IPGMD+DDCL+VAE+LL D     +FLDYPT
Sbjct: 377 EKMEIESSLHKRLYAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPT 396

[Close]

BLAST of Lag0040834.1 vs. NCBI nr
Match: TYJ96933.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 277.3 bits (708), Expect = 1.5e-70
Identity = 135/237 (56.96%), Postives = 170/237 (71.73%), Query Frame = 0


Query: 5   MAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKEKLPGC 64
           MA + SKA KH WT ++D+ LV+CLL LV+ GGWRA+N TF+P YL QV KLMKEK+P  
Sbjct: 1   MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 60

Query: 65  DIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHPPAR 124
           +IQVT NLESRV+ LK+QY A+ +MMGP CS FGWN+ERKCIEAEKS+FDDWV+GHP AR
Sbjct: 61  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 120

Query: 125 GLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPPI 184
           GL NKPF YF DL IVFG+D+A G       EMA+       +DD++ ++ED  +P+P  
Sbjct: 121 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 180

Query: 185 VEPVVGEEFYTTRSSRNDTPGSSRGSKRRRTVPADAVDTFRTEMRYVSTQIEKIALW 237
           +EP  GE+  +T  S     GSSR SK+RR+ P D +DTFR  M+  S +I KIA W
Sbjct: 181 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 237

[Close]

BLAST of Lag0040834.1 vs. NCBI nr
Match: XP_008455678.1 (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 277.3 bits (708), Expect = 1.5e-70
Identity = 135/237 (56.96%), Postives = 170/237 (71.73%), Query Frame = 0


Query: 5   MAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKEKLPGC 64
           MA + SKA KH WT ++D+ LV+CLL LV+ GGWRA+N TF+P YL QV KLMKEK+P  
Sbjct: 33  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 92

Query: 65  DIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHPPAR 124
           +IQVT NLESRV+ LK+QY A+ +MMGP CS FGWN+ERKCIEAEKS+FDDWV+GHP AR
Sbjct: 93  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 152

Query: 125 GLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPPI 184
           GL NKPF YF DL IVFG+D+A G       EMA+       +DD++ ++ED  +P+P  
Sbjct: 153 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 212

Query: 185 VEPVVGEEFYTTRSSRNDTPGSSRGSKRRRTVPADAVDTFRTEMRYVSTQIEKIALW 237
           +EP  GE+  +T  S     GSSR SK+RR+ P D +DTFR  M+  S +I KIA W
Sbjct: 213 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 269

[Close]

BLAST of Lag0040834.1 vs. NCBI nr
Match: TYK26842.1 (uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 260.4 bits (664), Expect = 2.0e-65
Identity = 129/224 (57.59%), Postives = 157/224 (70.09%), Query Frame = 0


Query: 2   FMQMAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKEKL 61
           + QMA   SK  KH WT +EDE LV+CLL LV+ G WR DNGTF+PGYL QV KLMKEK+
Sbjct: 83  WFQMASINSKVTKHWWTTIEDEALVECLLQLVEKGCWRVDNGTFKPGYLVQVQKLMKEKI 142

Query: 62  PGCDIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHP 121
              +IQVTPNLES V+ILK+QY  + EMMGP CSGF WN ERKCIEAEKS+ +DWV+GH 
Sbjct: 143 LESNIQVTPNLESGVKILKKQYTTIAEMMGPVCSGFSWNKERKCIEAEKSVSNDWVKGHL 202

Query: 122 PARGLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPS 181
            AR L NKPFPYF DL IVFG+DRA G    TP EM +       +DD+  ++ED  +P+
Sbjct: 203 NARYLLNKPFPYFYDLEIVFGRDRATGGKCKTPVEMGSQTARDTEEDDMIINLEDFDIPN 262

Query: 182 PPIVEPVVGEEFYTTRSSRNDTPGSSRGSKRRRTVPADAVDTFR 221
           P  +EP  GE+  +T +S     GSSR SK+RR+   D +DTFR
Sbjct: 263 PHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSRDLMDTFR 306

[Close]

BLAST of Lag0040834.1 vs. ExPASy TrEMBL
Match: A0A5A7U7F7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001200 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.5e-82
Identity = 162/299 (54.18%), Postives = 202/299 (67.56%), Query Frame = 0


Query: 5   MAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKEKLPGC 64
           MA + SKA KH WT + DEVLV+CLL LV+ GGWRADNGTF+ GYL QV KLMKEK+ G 
Sbjct: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKILGS 60

Query: 65  DIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHPPAR 124
           +IQVTPNL+SRV+ILK+QY A+ EMMGP CSGFGWN+ERKCIEAEKS+FDDWV+    AR
Sbjct: 61  NIQVTPNLKSRVKILKKQYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVK---TAR 120

Query: 125 GLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDLDDDVNTDVEDCYVPSPPIVEPVV 184
            +                                   +DD++ ++ED  +P+P  +EP  
Sbjct: 121 DIE----------------------------------EDDMDINLEDFDIPNPHGLEPPS 180

Query: 185 GEEFYTTRSSRNDTPGSSRGSKRRRTVPADAVDTFRTEMRYVSTQIEKIALWPQHKDEIE 244
           GE+  +T +S     GSSR SK+RR+   D +DTFR  MR  S +I KIA W + K EIE
Sbjct: 181 GEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIAAWQREKMEIE 240

Query: 245 SARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWKYKCCMRILGRQP 304
           S+  K+LY +LQ+IPGMD+DDCL+VAE+LL D     +FLDYP EWKY+ CMRILGRQP
Sbjct: 241 SSLHKRLYVDLQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP 261

[Close]

BLAST of Lag0040834.1 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 3.7e-78
Identity = 150/290 (51.72%), Postives = 190/290 (65.52%), Query Frame = 0


Query: 4   QMAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKEKLPG 63
           +MA + SKA KH WT +EDEVLV+CLL LV+ GGWRADNGTF+ GYL             
Sbjct: 137 EMASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYL------------- 196

Query: 64  CDIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHPPA 123
                            +QY A+ EMMGP CSGFGWN+ +KCIE EK +FDDWV+GHP A
Sbjct: 197 -----------------KQYTAIAEMMGPACSGFGWNEGQKCIEVEKPVFDDWVKGHPNA 256

Query: 124 RGLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPP 183
           +GL NKPFPYF DL +VFG+DRA G    TP EM++       +DD++ ++ED  +P+P 
Sbjct: 257 QGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPH 316

Query: 184 IVEPVVGEEFYTTRSSRNDTPGSSRGSKRRRTVPADAVDTFRTEMRYVSTQIEKIALWPQ 243
            +EP  GE+  +T +S     GSSR SK+RR+   D +DTFR  MR  S +I KIA W +
Sbjct: 317 GLEPPSGEDMPSTPTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQR 376

Query: 244 HKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPT 289
            K EIES+  K+LY ELQ+IPGMD+DDCL+VAE+LL D     +FLDYPT
Sbjct: 377 EKMEIESSLHKRLYAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPT 396

[Close]

BLAST of Lag0040834.1 vs. ExPASy TrEMBL
Match: A0A5D3BC95 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00380 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 7.5e-71
Identity = 135/237 (56.96%), Postives = 170/237 (71.73%), Query Frame = 0


Query: 5   MAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKEKLPGC 64
           MA + SKA KH WT ++D+ LV+CLL LV+ GGWRA+N TF+P YL QV KLMKEK+P  
Sbjct: 1   MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 60

Query: 65  DIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHPPAR 124
           +IQVT NLESRV+ LK+QY A+ +MMGP CS FGWN+ERKCIEAEKS+FDDWV+GHP AR
Sbjct: 61  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 120

Query: 125 GLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPPI 184
           GL NKPF YF DL IVFG+D+A G       EMA+       +DD++ ++ED  +P+P  
Sbjct: 121 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 180

Query: 185 VEPVVGEEFYTTRSSRNDTPGSSRGSKRRRTVPADAVDTFRTEMRYVSTQIEKIALW 237
           +EP  GE+  +T  S     GSSR SK+RR+ P D +DTFR  M+  S +I KIA W
Sbjct: 181 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 237

[Close]

BLAST of Lag0040834.1 vs. ExPASy TrEMBL
Match: A0A1S3C252 (uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103495792 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 7.5e-71
Identity = 135/237 (56.96%), Postives = 170/237 (71.73%), Query Frame = 0


Query: 5   MAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKEKLPGC 64
           MA + SKA KH WT ++D+ LV+CLL LV+ GGWRA+N TF+P YL QV KLMKEK+P  
Sbjct: 33  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 92

Query: 65  DIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHPPAR 124
           +IQVT NLESRV+ LK+QY A+ +MMGP CS FGWN+ERKCIEAEKS+FDDWV+GHP AR
Sbjct: 93  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 152

Query: 125 GLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPPI 184
           GL NKPF YF DL IVFG+D+A G       EMA+       +DD++ ++ED  +P+P  
Sbjct: 153 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 212

Query: 185 VEPVVGEEFYTTRSSRNDTPGSSRGSKRRRTVPADAVDTFRTEMRYVSTQIEKIALW 237
           +EP  GE+  +T  S     GSSR SK+RR+ P D +DTFR  M+  S +I KIA W
Sbjct: 213 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 269

[Close]

BLAST of Lag0040834.1 vs. ExPASy TrEMBL
Match: A0A5D3DTL0 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00340 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 9.5e-66
Identity = 129/224 (57.59%), Postives = 157/224 (70.09%), Query Frame = 0


Query: 2   FMQMAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKEKL 61
           + QMA   SK  KH WT +EDE LV+CLL LV+ G WR DNGTF+PGYL QV KLMKEK+
Sbjct: 83  WFQMASINSKVTKHWWTTIEDEALVECLLQLVEKGCWRVDNGTFKPGYLVQVQKLMKEKI 142

Query: 62  PGCDIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHP 121
              +IQVTPNLES V+ILK+QY  + EMMGP CSGF WN ERKCIEAEKS+ +DWV+GH 
Sbjct: 143 LESNIQVTPNLESGVKILKKQYTTIAEMMGPVCSGFSWNKERKCIEAEKSVSNDWVKGHL 202

Query: 122 PARGLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPS 181
            AR L NKPFPYF DL IVFG+DRA G    TP EM +       +DD+  ++ED  +P+
Sbjct: 203 NARYLLNKPFPYFYDLEIVFGRDRATGGKCKTPVEMGSQTARDTEEDDMIINLEDFDIPN 262

Query: 182 PPIVEPVVGEEFYTTRSSRNDTPGSSRGSKRRRTVPADAVDTFR 221
           P  +EP  GE+  +T +S     GSSR SK+RR+   D +DTFR
Sbjct: 263 PHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSRDLMDTFR 306

[Close]

BLAST of Lag0040834.1 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 75.9 bits (185), Expect = 6.4e-14
Identity = 63/287 (21.95%), Postives = 116/287 (40.42%), Query Frame = 0


Query: 17  WTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKEKL-PGCDIQVTPNLESR 76
           W P  D   +  +L   + G      G FR     ++  L   K     D+ V   L++R
Sbjct: 186 WHPPMDRYFIDLMLDQARRG--NQIEGVFRKQAWTEMVNLFNAKFESNFDVDV---LKNR 245

Query: 77  VRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHPPARGLRNKPFPYFD 136
            + L+RQ+ A+  ++     GF W++ER+ + A+ +++ D+++ H  AR    +P PY+ 
Sbjct: 246 YKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYK 305

Query: 137 DLAIVFGKDRANGEGASTPNEMATDLDDDVNTDVEDCYVPSPPIVEPVVGEEFYTTRSSR 196
           DL ++ G                     D   +  +C+V           +EF ++ ++ 
Sbjct: 306 DLCVLCG---------------------DSGIEENECFVAMDWFDPETEFQEFKSSGTTD 365

Query: 197 NDTPGSSRGSKRRRTVPADAVDTFRTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGEL 256
                    S      P +  D      +  +T    I       DE ++   +     +
Sbjct: 366 LSISAEEEDSNSLLFDPKNKRD------QLANTDTSPINPKKPRVDETQTMSIEDTVEAI 425

Query: 257 QSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWKYKCCMRILGRQ 303
           Q++P MD D+ +L A  LL D  K ++FL    + + K  +R L  Q
Sbjct: 426 QALPDMD-DELILDACDLLEDKLKAKTFLALDVKLRKKWLLRKLRPQ 437

[Close]

BLAST of Lag0040834.1 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 75.9 bits (185), Expect = 6.4e-14
Identity = 63/287 (21.95%), Postives = 116/287 (40.42%), Query Frame = 0


Query: 17  WTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKEKL-PGCDIQVTPNLESR 76
           W P  D   +  +L   + G      G FR     ++  L   K     D+ V   L++R
Sbjct: 186 WHPPMDRYFIDLMLDQARRG--NQIEGVFRKQAWTEMVNLFNAKFESNFDVDV---LKNR 245

Query: 77  VRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHPPARGLRNKPFPYFD 136
            + L+RQ+ A+  ++     GF W++ER+ + A+ +++ D+++ H  AR    +P PY+ 
Sbjct: 246 YKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYK 305

Query: 137 DLAIVFGKDRANGEGASTPNEMATDLDDDVNTDVEDCYVPSPPIVEPVVGEEFYTTRSSR 196
           DL ++ G                     D   +  +C+V           +EF ++ ++ 
Sbjct: 306 DLCVLCG---------------------DSGIEENECFVAMDWFDPETEFQEFKSSGTTD 365

Query: 197 NDTPGSSRGSKRRRTVPADAVDTFRTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGEL 256
                    S      P +  D      +  +T    I       DE ++   +     +
Sbjct: 366 LSISAEEEDSNSLLFDPKNKRD------QLANTDTSPINPKKPRVDETQTMSIEDTVEAI 425

Query: 257 QSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWKYKCCMRILGRQ 303
           Q++P MD D+ +L A  LL D  K ++FL    + + K  +R L  Q
Sbjct: 426 QALPDMD-DELILDACDLLEDKLKAKTFLALDVKLRKKWLLRKLRPQ 437

[Close]

BLAST of Lag0040834.1 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-13
Identity = 70/264 (26.52%), Postives = 117/264 (44.32%), Query Frame = 0


Query: 17  WTPMEDEVLVQCLLHLVQAGGWRADNGTFRPGYLQQVHKLMKE-KLPGCDIQVTPNLESR 76
           W+P E ++LVQ L+  +    WR  NGT     L    K M E     C  +   +  SR
Sbjct: 17  WSPEETKLLVQLLVEGIN-NNWRDSNGTI--SKLTVETKFMPEINKEFCRSKNYNHYLSR 76

Query: 77  VRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSIFDDWVRGHPPARGLRNKPFPYFD 136
           ++ LK QY + +++     SGFGW+   K   A   ++ D+++ HP  + LR   F +FD
Sbjct: 77  MKYLKIQYQSCLDLQ-RFSSGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFFD 136

Query: 137 DLAIVFGKDRANGEGASTPNEMATDLDDDVNTDVEDCYVPSPPIVEPVVGEEFYTT---R 196
           +L I+FG+  A G+ A    +    L      +    YV     V      E+ TT    
Sbjct: 137 ELQIIFGEGVATGKNAIGLCDSTDGLTYRAGENPRKEYVDDFDNV-----YEYDTTTHHE 196

Query: 197 SSRNDTPGSSRGS--------KRRRTVPADAVDTFRTEMRYVSTQIEKIALWPQHKDEIE 256
           SS +  P  S G+        ++R            + M  VS++I  I    + + + E
Sbjct: 197 SSEHYAPFMSHGTSESPKLPPRKRTRSERSTSQKEESPMMVVSSKILDIIQQREERQQNE 256

Query: 257 SARRK-QLYGELQSIPGMDMDDCL 268
            A++K  ++  ++ I   D+D+C+
Sbjct: 257 VAQKKNNVWDAIKEI--SDLDECI 269

[Close]

BLAST of Lag0040834.1 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 3.7e-06
Identity = 29/105 (27.62%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 77  RILKRQYGALVEMMGPTCS-----GFGWNDERKCIEAEKSIFDDWVRGHPPARGLRNKPF 136
           R+L+ +Y  L++      +     GF W++ R  I A+ +++D +++ HP AR  R K  
Sbjct: 221 RVLRHRYNKLLKYYKDMEAILKEDGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSL 280

Query: 137 PYFDDLAIVF------GKD-RANGEGASTPNEMATDLDDDVNTDV 170
           P ++DL  +F      G D R +G  A T    A+   +   T +
Sbjct: 281 PSYNDLDTIFACQAEQGTDHRDDGSAAQTSETKASQEQNSDRTRI 325

[Close]

BLAST of Lag0040834.1 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 3.7e-06
Identity = 29/105 (27.62%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 77  RILKRQYGALVEMMGPTCS-----GFGWNDERKCIEAEKSIFDDWVRGHPPARGLRNKPF 136
           R+L+ +Y  L++      +     GF W++ R  I A+ +++D +++ HP AR  R K  
Sbjct: 221 RVLRHRYNKLLKYYKDMEAILKEDGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSL 280

Query: 137 PYFDDLAIVF------GKD-RANGEGASTPNEMATDLDDDVNTDV 170
           P ++DL  +F      G D R +G  A T    A+   +   T +
Sbjct: 281 PSYNDLDTIFACQAEQGTDHRDDGSAAQTSETKASQEQNSDRTRI 325

The following BLAST results are available for this feature:

BLAST of Lag0040834.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050106.1	3.0e-82	54.18	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK07921.1	7.6e-78	51.72	hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]	[more]
TYJ96933.1	1.5e-70	56.96	retrotransposon protein [Cucumis melo var. makuwa]	[more]
XP_008455678.1	1.5e-70	56.96	PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]	[more]
TYK26842.1	2.0e-65	57.59	uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0040834.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0040834.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U7F7	1.5e-82	54.18	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3C7T4	3.7e-78	51.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BC95	7.5e-71	56.96	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C252	7.5e-71	56.96	uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103495792 P...	[more]
A0A5D3DTL0	9.5e-66	57.59	Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Lag0040834.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02210.1	6.4e-14	21.95	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	6.4e-14	21.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G27260.1	1.4e-13	26.52	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.1	3.7e-06	27.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.2	3.7e-06	27.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 17..113 e-value: 2.1E-7 score: 31.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..211
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 8..297
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 8..297

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0040834	Lag0040834	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0040834.1.exon2	Lag0040834.1.exon2	exon
Lag0040834.1.exon1	Lag0040834.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0040834.1	cds.Lag0040834.1_2	CDS
cds.Lag0040834.1	cds.Lag0040834.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0040834.1	Lag0040834.1-protein	polypeptide