Lag0039815.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0039815.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	nifU-like protein 2, chloroplastic
Location	chr13: 186348 .. 188204 (+)
Sequence length	699
RNA-Seq Expression	Lag0039815.1
Synteny	Lag0039815.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGCCGTGGTGTTGAATTCCTCCACTTACACCAGAGCCCCGCAAACCCTTGAAACTCCTTCTTCTTCTCGTTCCTTCAAGGTCCCTTTCATTTCTCGCTTTTACTCCTCGTTTTTTATTCCTCCCAACCAAATTGATAAGTTTAATTTTGGAATTTCTTGTAGATCTCGAGGTTATTCTTTTGCCATGCTTCACCCTCAAGAGAGCGCAGTCCTCTTTGGAGGAGATCATGTCGTTCCCTTCGAATTCGATTGCCGTCTAACTCACGCAGGCGAGGTATGATTCCTTTTTCGTTCTATTGAAGTTGATTGGATTGGTATAAATTTCTGCTTGTTGATTCTATCGGGATGTTTTTGTTAACTATCGTCTCTTTAATTGTCACTGTTAGGGTTGATAAGAGCTTTCTTTTGAGGTTACCAATCTTTGTCATTTGATTCGAAATTTGCTGTTTACAGTTACAAGAGCTGTTGCAACTTCCAATTCGGCACTGGAATTGCCGCTGACTGCAGAAAATGTTGAGAGTGTGTTGGACGAGGTTCGACCATATCTTATTGCAGATGGTGGAAATGTGGCATTACATGAAATAGACGGAAATGTTGTACGGTTGAAGCTACAAGGAGCATGCGGTTCATGTCCGAGTTCTGTTATGACCATGAAGATGGGAATTGAACGGCGTTTGATGGAGAAGATCCCTGAAATTGTGGCAGTGGAACCAATAGCAGATGAAGAAACTGGATTGGAGCTCAACGAGGACAATATAGAGAAGGTAAATAAATGTTCACTTTGATTTAGATGTAATTTATATGTTGTTTCTGAATCGTATTTTCGCCTTTAATCTCTGACCTAGAGATACAACTTATAATGAAAGAGGGCTGCTTCCACGGGTTCTTTGATATATATGATTATTGAGGTCGCTTTTACTTGAAATTGAGGGTAGGATTAAGCAAGCATTCTTTTTACTCAACTTCTACAATACTTCATATGGCATATTTCACTTTCTTGGATACTCTTGATAAAACACTTCTAGCTGTTTCCGAACCTATTATTTCTCATGTCATGATTACATCTTCCTTTCCTTCTTCATTGCAATATCAATTAAGTGCATCCAGTGTCCAATTTTCTCATCCATATGCTATTTGGTATTGGTCCAAAACTGCGACCAGCTTGATTAGGCCAGCGGCATTTGTTGGCAATGAACAAGACATGATATTAATGCACTTGTCGTGATTTCAACGAAGGAATAAATTCCATTAAACGTTTGGATCCTACTAGTACTAGTAGGTTCTTACGTGCTGTGATTGTGTCAACTGTTTGAAATACTCGTTAATCTCCATGTGTTATCAACTTTTCTTAGCTTGTAAGGTATGTACGTTTTTTTTTTATATTGACTTGGCTTGTGATAGATTTCCTATCTCATCTCATCCTTGCATCCCAGTTGGTTGGTATTCCTCTCTATTTGGATTGGTTGTAGTTCCATCGTTAATTATTATTTGTTCGACTATGATGCAGATTTCAACGCCTCTCAAATCCATAAGGAGACAAATTCAGACAATTCTTGTTTGTACAATTATGATTGACTGTTATTGCTGCCAATTTTTTTCCAGTGATGGCATAAGTTACTACATATTCAGAAGCTGAATTTTCTTTGGGCTCTTTTCTTAGGTACTCGAAGAGATAAGACCTTACCTTGTCGGGGCAGCAGGAGGATCTCTTGAACTTGTGGGCATCGAGGAGCCTATTGTTAAAGTTCGGATCACAGGGCCAGCCGCTGGGGTCATGACAGTTCGTGTGGCTGTTACACAGAAATTGCGGGAGAAGATCCCAGCCATTGCGGCCGTTCAACTTTTGTCATAA

mRNA sequence

ATGCATGCCGTGGTGTTGAATTCCTCCACTTACACCAGAGCCCCGCAAACCCTTGAAACTCCTTCTTCTTCTCGTTCCTTCAAGATCTCGAGGTTATTCTTTTGCCATGCTTCACCCTCAAGAGAGCGCAGTCCTCTTTGGAGGAGATCATGTCGTTCCCTTCGAATTCGATTGCCGTCTAACTCACGCAGGCGAGTTACAAGAGCTGTTGCAACTTCCAATTCGGCACTGGAATTGCCGCTGACTGCAGAAAATGTTGAGAGTGTGTTGGACGAGGTTCGACCATATCTTATTGCAGATGGTGGAAATGTGGCATTACATGAAATAGACGGAAATGTTGTACGGTTGAAGCTACAAGGAGCATGCGGTTCATGTCCGAGTTCTGTTATGACCATGAAGATGGGAATTGAACGGCGTTTGATGGAGAAGATCCCTGAAATTGTGGCAGTGGAACCAATAGCAGATGAAGAAACTGGATTGGAGCTCAACGAGGACAATATAGAGAAGGTACTCGAAGAGATAAGACCTTACCTTGTCGGGGCAGCAGGAGGATCTCTTGAACTTGTGGGCATCGAGGAGCCTATTGTTAAAGTTCGGATCACAGGGCCAGCCGCTGGGGTCATGACAGTTCGTGTGGCTGTTACACAGAAATTGCGGGAGAAGATCCCAGCCATTGCGGCCGTTCAACTTTTGTCATAA

Coding sequence (CDS)

ATGCATGCCGTGGTGTTGAATTCCTCCACTTACACCAGAGCCCCGCAAACCCTTGAAACTCCTTCTTCTTCTCGTTCCTTCAAGATCTCGAGGTTATTCTTTTGCCATGCTTCACCCTCAAGAGAGCGCAGTCCTCTTTGGAGGAGATCATGTCGTTCCCTTCGAATTCGATTGCCGTCTAACTCACGCAGGCGAGTTACAAGAGCTGTTGCAACTTCCAATTCGGCACTGGAATTGCCGCTGACTGCAGAAAATGTTGAGAGTGTGTTGGACGAGGTTCGACCATATCTTATTGCAGATGGTGGAAATGTGGCATTACATGAAATAGACGGAAATGTTGTACGGTTGAAGCTACAAGGAGCATGCGGTTCATGTCCGAGTTCTGTTATGACCATGAAGATGGGAATTGAACGGCGTTTGATGGAGAAGATCCCTGAAATTGTGGCAGTGGAACCAATAGCAGATGAAGAAACTGGATTGGAGCTCAACGAGGACAATATAGAGAAGGTACTCGAAGAGATAAGACCTTACCTTGTCGGGGCAGCAGGAGGATCTCTTGAACTTGTGGGCATCGAGGAGCCTATTGTTAAAGTTCGGATCACAGGGCCAGCCGCTGGGGTCATGACAGTTCGTGTGGCTGTTACACAGAAATTGCGGGAGAAGATCCCAGCCATTGCGGCCGTTCAACTTTTGTCATAA

Protein sequence

MHAVVLNSSTYTRAPQTLETPSSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRIRLPSNSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS

Homology

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BLAST of Lag0039815.1 vs. NCBI nr
Match: XP_022151795.1 (nifU-like protein 2, chloroplastic [Momordica charantia])

HSP 1 Score: 410.6 bits (1054), Expect = 8.9e-111
Identity = 219/232 (94.40%), Postives = 223/232 (96.12%), Query Frame = 0


Query: 1   MHAVVLNSSTYTRAPQTLETPSSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRIRLPS 60
           MHAVVLNSS YTRAPQ LETPSSSR+FKISR F  H SPSRER+PLWR+SCRS RIRLP+
Sbjct: 1   MHAVVLNSSPYTRAPQPLETPSSSRAFKISRPFLSHVSPSRERTPLWRKSCRSFRIRLPT 60

Query: 61  NSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQG 120
           NSRR V RAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQG
Sbjct: 61  NSRRPVMRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQG 120

Query: 121 ACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYLVG 180
           ACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYLVG
Sbjct: 121 ACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYLVG 180

Query: 181 AAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 233
           AAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS
Sbjct: 181 AAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 232

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BLAST of Lag0039815.1 vs. NCBI nr
Match: XP_008445979.1 (PREDICTED: nifU-like protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 378.6 bits (971), Expect = 3.8e-101
Identity = 206/234 (88.03%), Postives = 215/234 (91.88%), Query Frame = 0


Query: 1   MHAVV--LNSSTYTRAPQTLETPSSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRIRL 60
           MHAVV  LN+S YTRAPQTLE+PS SR+FK+SR FF H SP       WR+SCRSLRIRL
Sbjct: 1   MHAVVWNLNTSPYTRAPQTLESPSCSRNFKVSRFFFRHVSP-------WRKSCRSLRIRL 60

Query: 61  PSNSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 120
           PS+SR R+ RAVAT NSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGN+VRLKL
Sbjct: 61  PSSSRTRLIRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNIVRLKL 120

Query: 121 QGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYL 180
           QGACGSCPSSV TMKMGIERRLMEKIPEIVAVEPIAD ETGLELNE+NIEKVLEEIRPYL
Sbjct: 121 QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADVETGLELNEENIEKVLEEIRPYL 180

Query: 181 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 233
           VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS
Sbjct: 181 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 227

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BLAST of Lag0039815.1 vs. NCBI nr
Match: KAA0034154.1 (nifU-like protein 2 [Cucumis melo var. makuwa] >TYK15765.1 nifU-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 378.6 bits (971), Expect = 3.8e-101
Identity = 206/234 (88.03%), Postives = 215/234 (91.88%), Query Frame = 0


Query: 1   MHAVV--LNSSTYTRAPQTLETPSSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRIRL 60
           MHAVV  LN+S YTRAPQTLE+PS SR+FK+SR FF H SP       WR+SCRSLRIRL
Sbjct: 238 MHAVVWNLNTSPYTRAPQTLESPSCSRNFKVSRFFFRHVSP-------WRKSCRSLRIRL 297

Query: 61  PSNSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 120
           PS+SR R+ RAVAT NSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGN+VRLKL
Sbjct: 298 PSSSRTRLIRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNIVRLKL 357

Query: 121 QGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYL 180
           QGACGSCPSSV TMKMGIERRLMEKIPEIVAVEPIAD ETGLELNE+NIEKVLEEIRPYL
Sbjct: 358 QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADVETGLELNEENIEKVLEEIRPYL 417

Query: 181 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 233
           VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS
Sbjct: 418 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 464

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BLAST of Lag0039815.1 vs. NCBI nr
Match: KAG6601625.1 (NifU-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032385.1 NifU-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375.2 bits (962), Expect = 4.2e-100
Identity = 208/236 (88.14%), Postives = 215/236 (91.10%), Query Frame = 0


Query: 1   MHAVVLNSSTYTRAPQTLETP----SSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRI 60
           MH +VLNSS Y RAPQTL++P    SSSR+F+IS  F  H SPSR+RSPL RRSCRSLRI
Sbjct: 1   MHPMVLNSSPYHRAPQTLQSPPSSSSSSRAFEISSFFVRHVSPSRQRSPLCRRSCRSLRI 60

Query: 61  RLPSNSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRL 120
               NSR  V RAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRL
Sbjct: 61  ----NSRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRL 120

Query: 121 KLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRP 180
           KLQGACGSCPSSV TMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRP
Sbjct: 121 KLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRP 180

Query: 181 YLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 233
           YLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLLS
Sbjct: 181 YLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 232

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BLAST of Lag0039815.1 vs. NCBI nr
Match: XP_038877843.1 (nifU-like protein 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 373.6 bits (958), Expect = 1.2e-99
Identity = 205/233 (87.98%), Postives = 211/233 (90.56%), Query Frame = 0


Query: 1   MHAVV--LNSSTYTRAPQTLETPSSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRIRL 60
           MHA+V  LN S YTR PQTLE+PS SR+FKISR F  H SP       WRRSCRSLR+RL
Sbjct: 1   MHAMVLNLNPSPYTRPPQTLESPSCSRTFKISRFFLRHLSP-------WRRSCRSLRVRL 60

Query: 61  PSNSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 120
           PS SR RV RAVAT +SALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL
Sbjct: 61  PSTSRTRVIRAVATPHSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 120

Query: 121 QGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYL 180
           QGACGSCPSSV TMKMGIERRLMEKIPEIVAVEPIADEETGLELNE+NIEKVLEEIRPYL
Sbjct: 121 QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYL 180

Query: 181 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
           VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL
Sbjct: 181 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 226

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BLAST of Lag0039815.1 vs. ExPASy Swiss-Prot
Match: Q93W20 (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU2 PE=1 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-73
Identity = 158/238 (66.39%), Postives = 180/238 (75.63%), Query Frame = 0


Query: 1   MHAVVLNSSTYTRAPQTLETPSSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRIRLPS 60
           M  + LN +  +R P     PSSS S  +    F     S+    L  R C  LR  L  
Sbjct: 1   MQLLTLNPAAISRTPPQAIDPSSSSSLLLP---FPQILSSQRALGLVARPCNPLRRGLSR 60

Query: 61  -------NSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNV 120
                    R +V +AVAT +  LE+PLT ENVESVLDE+RPYL++DGGNVALHEIDGN+
Sbjct: 61  FLSSRQLFRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNI 120

Query: 121 VRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEE 180
           VR+KLQGACGSCPSS MTMKMGIERRLMEKIPEIVAVE + DEETGLELNE+NIEKVLEE
Sbjct: 121 VRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEE 180

Query: 181 IRPYLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
           IRPYL+G A GSL+LV IE+PIVK+RITGPAAGVMTVRVAVTQKLREKIP+IAAVQL+
Sbjct: 181 IRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

[Close]

BLAST of Lag0039815.1 vs. ExPASy Swiss-Prot
Match: Q84LK7 (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.5e-60
Identity = 137/222 (61.71%), Postives = 168/222 (75.68%), Query Frame = 0


Query: 14  APQTLETPSSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRIRLPSNSR-RRVTRAVAT 73
           AP T  T SSS SFK++   +  +S     SP  R       +  P++ R   V  A+A 
Sbjct: 15  APST--TTSSSASFKVAA--YAWSSCRSSSSPATR------LVAAPNHQRPPLVVGAIAG 74

Query: 74  SN--SALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVM 133
            +  +A++LPLTA NVESVLD+VRPYL ADGG+VALHEI GNVVRLKLQGACGSCPSS++
Sbjct: 75  LDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLI 134

Query: 134 TMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYLVGAAGGSLELVG 193
           T+K GIERRLMEKIP++ AVEP+ D+ETGLELNE+N+EKVL EIRPYL G  GG L+ + 
Sbjct: 135 TIKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLM 194

Query: 194 IEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 233
           I+ PIVKVR+TGPAA V TVR+AV++KLREKIP+I  VQLLS
Sbjct: 195 IKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIVQLLS 226

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BLAST of Lag0039815.1 vs. ExPASy Swiss-Prot
Match: Q84RQ7 (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU3 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 116/154 (75.32%), Postives = 131/154 (85.06%), Query Frame = 0


Query: 79  LPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 138
           +PLT ENVE VLDEVRP L+ADGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE 
Sbjct: 82  MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 141

Query: 139 RLMEKIPEIVAVEPIADEET-GLELNEDNIEKVLEEIRPYLVGAAGGSLELVGIEEPIVK 198
           RL +KIPEI++VE   + ET GLELN++NIEKVL E+RPYL G  GG LELV I+  +VK
Sbjct: 142 RLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVK 201

Query: 199 VRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
           VR+TGPAAGVMTVRVA+TQKLRE IP+I AVQLL
Sbjct: 202 VRLTGPAAGVMTVRVALTQKLRETIPSIGAVQLL 235

[Close]

BLAST of Lag0039815.1 vs. ExPASy Swiss-Prot
Match: Q93W77 (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.8e-20
Identity = 59/147 (40.14%), Postives = 91/147 (61.90%), Query Frame = 0


Query: 75  SALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 134
           SA    LT +NV+ VL++VRP+LI+DGGNV +  ++  VV LKLQGAC SCPSS  TM M
Sbjct: 79  SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTM 138

Query: 135 GIERRLMEKIPEIVA-VEPIADEETGLELNEDNIEKVLEEIRPYLVGAAGGSLELVGIEE 194
           GIER L EK  + +  +  + DEE   ++  + +   L+ +RP  +   GGS+E++ +E 
Sbjct: 139 GIERVLKEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRP-AIKNYGGSVEVLSVEG 198

Query: 195 PIVKVRITGPAAGVMTVRVAVTQKLRE 221
               V+  GP +  M ++ A+ +K ++
Sbjct: 199 EDCVVKYVGPESIGMGIQAAIKEKFKD 223

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BLAST of Lag0039815.1 vs. ExPASy Swiss-Prot
Match: O32119 (Putative nitrogen fixation protein YutI OS=Bacillus subtilis (strain 168) OX=224308 GN=yutI PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.1e-16
Identity = 37/70 (52.86%), Postives = 55/70 (78.57%), Query Frame = 0


Query: 84  ENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 143
           E V+ VLD++RP+L+ DGG+  L ++D  +V+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 41  EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLEE 100

Query: 144 IPEIVAVEPI 154
           +P +V VE +
Sbjct: 101 VPGVVEVEQV 110

[Close]

BLAST of Lag0039815.1 vs. ExPASy TrEMBL
Match: A0A6J1DC70 (nifU-like protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019691 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.3e-111
Identity = 219/232 (94.40%), Postives = 223/232 (96.12%), Query Frame = 0


Query: 1   MHAVVLNSSTYTRAPQTLETPSSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRIRLPS 60
           MHAVVLNSS YTRAPQ LETPSSSR+FKISR F  H SPSRER+PLWR+SCRS RIRLP+
Sbjct: 1   MHAVVLNSSPYTRAPQPLETPSSSRAFKISRPFLSHVSPSRERTPLWRKSCRSFRIRLPT 60

Query: 61  NSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQG 120
           NSRR V RAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQG
Sbjct: 61  NSRRPVMRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQG 120

Query: 121 ACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYLVG 180
           ACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYLVG
Sbjct: 121 ACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYLVG 180

Query: 181 AAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 233
           AAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS
Sbjct: 181 AAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 232

[Close]

BLAST of Lag0039815.1 vs. ExPASy TrEMBL
Match: A0A5A7SSG4 (NifU-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002690 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 206/234 (88.03%), Postives = 215/234 (91.88%), Query Frame = 0


Query: 1   MHAVV--LNSSTYTRAPQTLETPSSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRIRL 60
           MHAVV  LN+S YTRAPQTLE+PS SR+FK+SR FF H SP       WR+SCRSLRIRL
Sbjct: 238 MHAVVWNLNTSPYTRAPQTLESPSCSRNFKVSRFFFRHVSP-------WRKSCRSLRIRL 297

Query: 61  PSNSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 120
           PS+SR R+ RAVAT NSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGN+VRLKL
Sbjct: 298 PSSSRTRLIRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNIVRLKL 357

Query: 121 QGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYL 180
           QGACGSCPSSV TMKMGIERRLMEKIPEIVAVEPIAD ETGLELNE+NIEKVLEEIRPYL
Sbjct: 358 QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADVETGLELNEENIEKVLEEIRPYL 417

Query: 181 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 233
           VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS
Sbjct: 418 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 464

[Close]

BLAST of Lag0039815.1 vs. ExPASy TrEMBL
Match: A0A1S3BEN3 (nifU-like protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488846 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 206/234 (88.03%), Postives = 215/234 (91.88%), Query Frame = 0


Query: 1   MHAVV--LNSSTYTRAPQTLETPSSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRIRL 60
           MHAVV  LN+S YTRAPQTLE+PS SR+FK+SR FF H SP       WR+SCRSLRIRL
Sbjct: 1   MHAVVWNLNTSPYTRAPQTLESPSCSRNFKVSRFFFRHVSP-------WRKSCRSLRIRL 60

Query: 61  PSNSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 120
           PS+SR R+ RAVAT NSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGN+VRLKL
Sbjct: 61  PSSSRTRLIRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNIVRLKL 120

Query: 121 QGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYL 180
           QGACGSCPSSV TMKMGIERRLMEKIPEIVAVEPIAD ETGLELNE+NIEKVLEEIRPYL
Sbjct: 121 QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADVETGLELNEENIEKVLEEIRPYL 180

Query: 181 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 233
           VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS
Sbjct: 181 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 227

[Close]

BLAST of Lag0039815.1 vs. ExPASy TrEMBL
Match: A0A6J1GZA7 (nifU-like protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458860 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.7e-99
Identity = 207/236 (87.71%), Postives = 214/236 (90.68%), Query Frame = 0


Query: 1   MHAVVLNSSTYTRAPQTLETP----SSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRI 60
           M  +VLNSS Y RAPQTL++P    SSSR+F+IS  F  H SPSR+RSPL RRSCRSLRI
Sbjct: 1   MQPMVLNSSPYHRAPQTLQSPPSSSSSSRAFEISSFFVRHVSPSRQRSPLCRRSCRSLRI 60

Query: 61  RLPSNSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRL 120
               NSR  V RAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRL
Sbjct: 61  ----NSRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRL 120

Query: 121 KLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRP 180
           KLQGACGSCPSSV TMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRP
Sbjct: 121 KLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRP 180

Query: 181 YLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 233
           YLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLLS
Sbjct: 181 YLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 232

[Close]

BLAST of Lag0039815.1 vs. ExPASy TrEMBL
Match: A0A6J1KEQ7 (nifU-like protein 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493175 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.2e-99
Identity = 207/238 (86.97%), Postives = 214/238 (89.92%), Query Frame = 0


Query: 1   MHAVVLNSSTYTRAPQTLETPS------SSRSFKISRLFFCHASPSRERSPLWRRSCRSL 60
           MH +VLNSS Y RAPQTL++PS      SSR+FKIS  F  H SPSR+RS L RRSCRSL
Sbjct: 1   MHPMVLNSSPYHRAPQTLQSPSSSSSSFSSRAFKISSFFVRHVSPSRQRSLLCRRSCRSL 60

Query: 61  RIRLPSNSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVV 120
           RI    NSR  V RAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVV
Sbjct: 61  RI----NSRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVV 120

Query: 121 RLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEI 180
           RLKLQGACGSCPSSV TMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEI
Sbjct: 121 RLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEI 180

Query: 181 RPYLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 233
           RPYL+GAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLLS
Sbjct: 181 RPYLIGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 234

[Close]

BLAST of Lag0039815.1 vs. TAIR 10
Match: AT5G49940.1 (NIFU-like protein 2 )

HSP 1 Score: 277.7 bits (709), Expect = 8.4e-75
Identity = 158/238 (66.39%), Postives = 180/238 (75.63%), Query Frame = 0


Query: 1   MHAVVLNSSTYTRAPQTLETPSSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRIRLPS 60
           M  + LN +  +R P     PSSS S  +    F     S+    L  R C  LR  L  
Sbjct: 1   MQLLTLNPAAISRTPPQAIDPSSSSSLLLP---FPQILSSQRALGLVARPCNPLRRGLSR 60

Query: 61  -------NSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNV 120
                    R +V +AVAT +  LE+PLT ENVESVLDE+RPYL++DGGNVALHEIDGN+
Sbjct: 61  FLSSRQLFRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNI 120

Query: 121 VRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEE 180
           VR+KLQGACGSCPSS MTMKMGIERRLMEKIPEIVAVE + DEETGLELNE+NIEKVLEE
Sbjct: 121 VRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEE 180

Query: 181 IRPYLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
           IRPYL+G A GSL+LV IE+PIVK+RITGPAAGVMTVRVAVTQKLREKIP+IAAVQL+
Sbjct: 181 IRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

[Close]

BLAST of Lag0039815.1 vs. TAIR 10
Match: AT4G25910.1 (NFU domain protein 3 )

HSP 1 Score: 217.6 bits (553), Expect = 1.0e-56
Identity = 116/154 (75.32%), Postives = 131/154 (85.06%), Query Frame = 0


Query: 79  LPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 138
           +PLT ENVE VLDEVRP L+ADGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE 
Sbjct: 82  MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 141

Query: 139 RLMEKIPEIVAVEPIADEET-GLELNEDNIEKVLEEIRPYLVGAAGGSLELVGIEEPIVK 198
           RL +KIPEI++VE   + ET GLELN++NIEKVL E+RPYL G  GG LELV I+  +VK
Sbjct: 142 RLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVK 201

Query: 199 VRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
           VR+TGPAAGVMTVRVA+TQKLRE IP+I AVQLL
Sbjct: 202 VRLTGPAAGVMTVRVALTQKLRETIPSIGAVQLL 235

[Close]

BLAST of Lag0039815.1 vs. TAIR 10
Match: AT5G49940.2 (NIFU-like protein 2 )

HSP 1 Score: 182.2 bits (461), Expect = 4.8e-46
Identity = 106/177 (59.89%), Postives = 122/177 (68.93%), Query Frame = 0


Query: 1   MHAVVLNSSTYTRAPQTLETPSSSRSFKISRLFFCHASPSRERSPLWRRSCRSLRIRLPS 60
           M  + LN +  +R P     PSSS S  +    F     S+    L  R C  LR  L  
Sbjct: 1   MQLLTLNPAAISRTPPQAIDPSSSSSLLLP---FPQILSSQRALGLVARPCNPLRRGLSR 60

Query: 61  -------NSRRRVTRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNV 120
                    R +V +AVAT +  LE+PLT ENVESVLDE+RPYL++DGGNVALHEIDGN+
Sbjct: 61  FLSSRQLFRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNI 120

Query: 121 VRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKV 171
           VR+KLQGACGSCPSS MTMKMGIERRLMEKIPEIVAVE + DEETGLELNE+NIEKV
Sbjct: 121 VRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKV 174

[Close]

BLAST of Lag0039815.1 vs. TAIR 10
Match: AT4G01940.1 (NFU domain protein 1 )

HSP 1 Score: 99.4 bits (246), Expect = 4.1e-21
Identity = 59/147 (40.14%), Postives = 91/147 (61.90%), Query Frame = 0


Query: 75  SALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 134
           SA    LT +NV+ VL++VRP+LI+DGGNV +  ++  VV LKLQGAC SCPSS  TM M
Sbjct: 79  SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTM 138

Query: 135 GIERRLMEKIPEIVA-VEPIADEETGLELNEDNIEKVLEEIRPYLVGAAGGSLELVGIEE 194
           GIER L EK  + +  +  + DEE   ++  + +   L+ +RP  +   GGS+E++ +E 
Sbjct: 139 GIERVLKEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRP-AIKNYGGSVEVLSVEG 198

Query: 195 PIVKVRITGPAAGVMTVRVAVTQKLRE 221
               V+  GP +  M ++ A+ +K ++
Sbjct: 199 EDCVVKYVGPESIGMGIQAAIKEKFKD 223

[Close]

BLAST of Lag0039815.1 vs. TAIR 10
Match: AT3G20970.1 (NFU domain protein 4 )

HSP 1 Score: 55.5 bits (132), Expect = 6.8e-08
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 82  TAENVESVLD-EVRPYLIADGGNVALHEID--GNVVRLKLQGACGSCPSSVMTMKMGIER 141
           T   ++ +L+  +RP +  DGG++     D    +V+L++QGAC  CPSS +T+K GIE 
Sbjct: 192 TVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIEN 251

Query: 142 RLMEKIPEIVAVEPIADEE 158
            LM  + E+  VE   D E
Sbjct: 252 MLMHYVSEVKGVEQEFDGE 270

The following BLAST results are available for this feature:

BLAST of Lag0039815.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151795.1	8.9e-111	94.40	nifU-like protein 2, chloroplastic [Momordica charantia]	[more]
XP_008445979.1	3.8e-101	88.03	PREDICTED: nifU-like protein 2, chloroplastic [Cucumis melo]	[more]
KAA0034154.1	3.8e-101	88.03	nifU-like protein 2 [Cucumis melo var. makuwa] >TYK15765.1 nifU-like protein 2 [...	[more]
KAG6601625.1	4.2e-100	88.14	NifU-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_038877843.1	1.2e-99	87.98	nifU-like protein 2, chloroplastic [Benincasa hispida]	[more]

BLAST of Lag0039815.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93W20	1.2e-73	66.39	NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU2 PE=1...	[more]
Q84LK7	1.5e-60	61.71	NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=N...	[more]
Q84RQ7	1.5e-55	75.32	NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU3 PE=2...	[more]
Q93W77	5.8e-20	40.14	NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU1 PE=1...	[more]
O32119	5.1e-16	52.86	Putative nitrogen fixation protein YutI OS=Bacillus subtilis (strain 168) OX=224...	[more]

BLAST of Lag0039815.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DC70	4.3e-111	94.40	nifU-like protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11101969...	[more]
A0A5A7SSG4	1.8e-101	88.03	NifU-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G0...	[more]
A0A1S3BEN3	1.8e-101	88.03	nifU-like protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488846 PE=3 ...	[more]
A0A6J1GZA7	1.7e-99	87.71	nifU-like protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458860...	[more]
A0A6J1KEQ7	2.2e-99	86.97	nifU-like protein 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493175 P...	[more]

BLAST of Lag0039815.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49940.1	8.4e-75	66.39	NIFU-like protein 2	[more]
AT4G25910.1	1.0e-56	75.32	NFU domain protein 3	[more]
AT5G49940.2	4.8e-46	59.89	NIFU-like protein 2	[more]
AT4G01940.1	4.1e-21	40.14	NFU domain protein 1	[more]
AT3G20970.1	6.8e-08	37.97	NFU domain protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034904	Fe-S cluster assembly domain superfamily	GENE3D	3.30.300.130		coord: 77..160 e-value: 3.6E-34 score: 118.6
IPR034904	Fe-S cluster assembly domain superfamily	GENE3D	3.30.300.130		coord: 161..232 e-value: 5.9E-22 score: 79.6
IPR034904	Fe-S cluster assembly domain superfamily	SUPERFAMILY	117916	Fe-S cluster assembly (FSCA) domain-like	coord: 161..230
IPR034904	Fe-S cluster assembly domain superfamily	SUPERFAMILY	117916	Fe-S cluster assembly (FSCA) domain-like	coord: 83..157
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PFAM	PF01106	NifU	coord: 167..229 e-value: 3.0E-13 score: 49.7 coord: 86..151 e-value: 7.1E-27 score: 93.4
None	No IPR available	PANTHER	PTHR11178:SF39	FIXATION PROTEIN, PUTATIVE, EXPRESSED-RELATED	coord: 10..231
None	No IPR available	PANTHER	PTHR11178	IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED	coord: 10..231

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0039815	Lag0039815	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0039815.1.exon1	Lag0039815.1.exon1	exon
Lag0039815.1.exon2	Lag0039815.1.exon2	exon
Lag0039815.1.exon3	Lag0039815.1.exon3	exon
Lag0039815.1.exon4	Lag0039815.1.exon4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0039815.1	cds.Lag0039815.1	CDS
cds.Lag0039815.1	cds.Lag0039815.1_2	CDS
cds.Lag0039815.1	cds.Lag0039815.1_3	CDS
cds.Lag0039815.1	cds.Lag0039815.1_4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0039815.1	Lag0039815.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0097428	protein maturation by iron-sulfur cluster transfer
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding