Lag0032363.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032363.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Oleosin-like protein
Location	chr11: 31290962 .. 31291336 (-)
Sequence length	375
RNA-Seq Expression	Lag0032363.1
Synteny	Lag0032363.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAACCCAAAGCCCGACCGTCCTCCGATCAGCTTCCCAGCTCCCACAAAGTCGTCCAGGCTGCCACTGCCGTCACCGCCGGCGGCTCCCTCCTCGTCCTCTCCGGCCTCACCATGGCTGCCACCGTCATTGCCCTGGCCGTCGCCACCCCGCTCTTCGTCATATTCAGCCCTGTTCTCGTCCCGGCGGCGATCACGGTGTCGCTTCTGATGGTGGGGTTCTTGGCCTCCGGTGGGTTCGGCGTGGCTGCGGTGGTTGTTTTGTCGTGGTTCTTCAGGTACATGGCTGGAAAACGGCGAGGAGAGGGTGGGGATTGGCCGGAAAAAGGTCGGTATAGGTTTGGTGGGAAGGGGAGAGAAATGGAAGGTTAA

mRNA sequence

ATGGCGGAACCCAAAGCCCGACCGTCCTCCGATCAGCTTCCCAGCTCCCACAAAGTCGTCCAGGCTGCCACTGCCGTCACCGCCGGCGGCTCCCTCCTCGTCCTCTCCGGCCTCACCATGGCTGCCACCGTCATTGCCCTGGCCGTCGCCACCCCGCTCTTCGTCATATTCAGCCCTGTTCTCGTCCCGGCGGCGATCACGGTGTCGCTTCTGATGGTGGGGTTCTTGGCCTCCGGTGGGTTCGGCGTGGCTGCGGTGGTTGTTTTGTCGTGGTTCTTCAGGTACATGGCTGGAAAACGGCGAGGAGAGGGTGGGGATTGGCCGGAAAAAGGTCGGTATAGGTTTGGTGGGAAGGGGAGAGAAATGGAAGGTTAA

Coding sequence (CDS)

ATGGCGGAACCCAAAGCCCGACCGTCCTCCGATCAGCTTCCCAGCTCCCACAAAGTCGTCCAGGCTGCCACTGCCGTCACCGCCGGCGGCTCCCTCCTCGTCCTCTCCGGCCTCACCATGGCTGCCACCGTCATTGCCCTGGCCGTCGCCACCCCGCTCTTCGTCATATTCAGCCCTGTTCTCGTCCCGGCGGCGATCACGGTGTCGCTTCTGATGGTGGGGTTCTTGGCCTCCGGTGGGTTCGGCGTGGCTGCGGTGGTTGTTTTGTCGTGGTTCTTCAGGTACATGGCTGGAAAACGGCGAGGAGAGGGTGGGGATTGGCCGGAAAAAGGTCGGTATAGGTTTGGTGGGAAGGGGAGAGAAATGGAAGGTTAA

Protein sequence

MAEPKARPSSDQLPSSHKVVQAATAVTAGGSLLVLSGLTMAATVIALAVATPLFVIFSPVLVPAAITVSLLMVGFLASGGFGVAAVVVLSWFFRYMAGKRRGEGGDWPEKGRYRFGGKGREMEG

Homology

[Close]

BLAST of Lag0032363.1 vs. NCBI nr
Match: KAG6605647.1 (Oleosin 14.9 kDa, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.0 bits (380), Expect = 6.8e-33
Identity = 86/120 (71.67%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 5   KARPSSDQLPSSHKVVQAATAVTAGGSLLVLSGLTMAATVIALAVATPLFVIFSPVLVPA 64
           KAR +S++LP SHKVV+A TA T GGSLL LSGLTM  TVIALA+ATPLFVIFSPVLVPA
Sbjct: 41  KARQTSNELPRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPA 100

Query: 65  AITVSLLMVGFLASGGFGVAAVVVLSWFFRYMAGKRRGEGGDWPEKGRYRFGGKGREMEG 124
           AITVSLL++GFL SGGFG+AA VVL WFFRY+AG+R+    D P K  Y+FGGKG ++EG
Sbjct: 101 AITVSLLIMGFLISGGFGIAAAVVLWWFFRYVAGRRQDANNDLPGKKSYKFGGKGIQVEG 160

[Close]

BLAST of Lag0032363.1 vs. NCBI nr
Match: KAG7035557.1 (Oleosin 14.9 kDa, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.0 bits (380), Expect = 6.8e-33
Identity = 86/120 (71.67%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 5   KARPSSDQLPSSHKVVQAATAVTAGGSLLVLSGLTMAATVIALAVATPLFVIFSPVLVPA 64
           KAR +S++LP SHKVV+A TA T GGSLL LSGLTM  TVIALA+ATPLFVIFSPVLVPA
Sbjct: 11  KARQTSNELPRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPA 70

Query: 65  AITVSLLMVGFLASGGFGVAAVVVLSWFFRYMAGKRRGEGGDWPEKGRYRFGGKGREMEG 124
           AITVSLL++GFL SGGFG+AA VVL WFFRY+AG+R+    D P K  Y+FGGKG ++EG
Sbjct: 71  AITVSLLIMGFLISGGFGIAAAVVLWWFFRYVAGRRQDANNDLPGKKSYKFGGKGIQVEG 130

[Close]

BLAST of Lag0032363.1 vs. NCBI nr
Match: XP_011654853.1 (oleosin 1 [Cucumis sativus] >KGN50321.1 hypothetical protein Csa_000425 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 9.9e-32
Identity = 83/112 (74.11%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 9   SSDQLPSSHKVVQAATAVTAGGSLLVLSGLTMAATVIALAVATPLFVIFSPVLVPAAITV 68
           SSDQLP SHKVV+AATAVT G S LVLS L MA TVI LAV TPLFVIFSPVLVPA IT 
Sbjct: 89  SSDQLPRSHKVVKAATAVTTGTSFLVLSALIMAGTVIGLAVVTPLFVIFSPVLVPALITA 148

Query: 69  SLLMVGFLASGGFGVAAVVVLSWFFRYMAGKRRGEGGDWPEKGRYRFGGKGR 121
           +LL++GFLASGGFG AA+VVL WFFRYM    R   GDWPEK R++F GKGR
Sbjct: 149 TLLILGFLASGGFGAAAIVVLLWFFRYMGNNGRNRSGDWPEKSRFKFNGKGR 200

[Close]

BLAST of Lag0032363.1 vs. NCBI nr
Match: XP_023533015.1 (oleosin 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.5 bits (358), Expect = 2.4e-30
Identity = 81/119 (68.07%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 5   KARPSSDQLPSSHKVVQAATAVTAGGSLLVLSGLTMAATVIALAVATPLFVIFSPVLVPA 64
           K+R +SD+LP SHK+V+A TA T GGSLL LS LTM  TVIALA+ATPLFVIFSPVLVPA
Sbjct: 11  KSRQTSDELPRSHKIVKAITAATTGGSLLALSALTMTGTVIALAIATPLFVIFSPVLVPA 70

Query: 65  AITVSLLMVGFLASGGFGVAAVVVLSWFFRYMAGKRRGEGGDWPEKGRYRFGGKGREME 124
           AITVSLL++GFL SGGFG+AA VV  WFFRY+ GKR+    D P K  Y+FG KG E++
Sbjct: 71  AITVSLLIMGFLISGGFGIAAAVVTWWFFRYVTGKRQDADNDLPGKKSYKFGSKGIEVQ 129

[Close]

BLAST of Lag0032363.1 vs. NCBI nr
Match: XP_022159524.1 (oleosin 1-like [Momordica charantia])

HSP 1 Score: 137.9 bits (346), Expect = 6.0e-29
Identity = 79/115 (68.70%), Postives = 93/115 (80.87%), Query Frame = 0


Query: 9   SSDQLPSSHKVVQAATAVTAGGSLLVLSGLTMAATVIALAVATPLFVIFSPVLVPAAITV 68
           SSDQ P +H++++AATA   G SLLVLS   +A TVIALAVATPLFVIFSPVLVPA ITV
Sbjct: 20  SSDQPPRAHRLIKAATAAAGGASLLVLSAFIVAGTVIALAVATPLFVIFSPVLVPALITV 79

Query: 69  SLLMVGFLASGGFGVAAVVVLSWFFRYMAGKRRGEGGDWPEKGRYRFGGKGREME 124
           SL+ +GFLASGGF V ++ V S  +RY+AGKRR  GGD PE+GRYR GGKGRE+E
Sbjct: 80  SLIGMGFLASGGFAVVSLAVFSGLYRYLAGKRRDGGGDLPEQGRYRLGGKGREVE 134

[Close]

BLAST of Lag0032363.1 vs. ExPASy Swiss-Prot
Match: Q43804 (Oleosin 1 OS=Prunus dulcis OX=3755 GN=OLE1 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.9e-26
Identity = 70/112 (62.50%), Postives = 89/112 (79.46%), Query Frame = 0


Query: 12  QLPSSHKVVQAATAVTAGGSLLVLSGLTMAATVIALAVATPLFVIFSPVLVPAAITVSLL 71
           Q P S++V +AATAVTAGGSLLVLSGL +A TVIAL +ATPL VIFSPVLVPA ITV+L+
Sbjct: 19  QQPRSYQVAKAATAVTAGGSLLVLSGLVLAGTVIALTIATPLLVIFSPVLVPALITVALI 78

Query: 72  MVGFLASGGFGVAAVVVLSWFFRYMAGKRRGEGGDWPEKGRYRFGGKGREME 124
            +GFL SGGFGVAAV VLSW ++Y+ GK +  G D  ++ R++  GK R+++
Sbjct: 79  TMGFLTSGGFGVAAVTVLSWIYKYVTGK-QPPGADQLDQARHKLAGKARDIK 129

[Close]

BLAST of Lag0032363.1 vs. ExPASy Swiss-Prot
Match: Q9XHP2 (Oleosin L OS=Sesamum indicum OX=4182 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-25
Identity = 72/110 (65.45%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 14  PSSHKVVQAATAVTAGGSLLVLSGLTMAATVIALAVATPLFVIFSPVLVPAAITVSLLMV 73
           P + +VV+AATAVTAGGSLLVLSGLT+A TVIAL +ATPL VIFSPVLVPA IT+ LL  
Sbjct: 20  PRAQRVVKAATAVTAGGSLLVLSGLTLAGTVIALTIATPLLVIFSPVLVPAVITIFLLGA 79

Query: 74  GFLASGGFGVAAVVVLSWFFRYMAGKRRGEGGDWPEKGRYRFGGKGREME 124
           GFLASGGFGVAA+ VLSW +RY+ GK    G D  E  + +   K REM+
Sbjct: 80  GFLASGGFGVAALSVLSWIYRYLTGK-HPPGADQLESAKTKLASKAREMK 128

[Close]

BLAST of Lag0032363.1 vs. ExPASy Swiss-Prot
Match: Q43284 (Oleosin 14.9 kDa OS=Arabidopsis thaliana OX=3702 GN=OL3 PE=2 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-23
Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 0


Query: 14  PSSHKVVQAATAVTAGGSLLVLSGLTMAATVIALAVATPLFVIFSPVLVPAAITVSLLMV 73
           P + ++V+AATAVTAGGSLLVLSGLT+A TVIAL VATPL VIFSPVLVPA +TV+L++ 
Sbjct: 22  PKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTVALIIT 81

Query: 74  GFLASGGFGVAAVVVLSWFFRYMAGKRRGEGGDWPEKGRYRFGGK 119
           GFLASGGFG+AA+   SW +R+M     G G D  E  R + G +
Sbjct: 82  GFLASGGFGIAAITAFSWLYRHMT----GSGSDKIENARMKVGSR 122

[Close]

BLAST of Lag0032363.1 vs. ExPASy Swiss-Prot
Match: P29111 (Major oleosin NAP-II (Fragment) OS=Brassica napus OX=3708 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 8.7e-23
Identity = 63/108 (58.33%), Postives = 82/108 (75.93%), Query Frame = 0


Query: 16  SHKVVQAATAVTAGGSLLVLSGLTMAATVIALAVATPLFVIFSPVLVPAAITVSLLMVGF 75
           S ++ +A TAVTAGGSLLVLS LT+  TVIAL VATPL VIFSP+LVPA ITV+LL+ GF
Sbjct: 42  SRQIAKAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGF 101

Query: 76  LASGGFGVAAVVVLSWFFRYMAGKRRGEGGDWPEKGRYRFGGKGREME 124
           L+SGGFG+AA+ V SW ++Y  G+   +G D  +  R + GGK ++M+
Sbjct: 102 LSSGGFGIAAITVFSWIYKYATGE-HPQGSDKLDSARMKLGGKVQDMK 148

[Close]

BLAST of Lag0032363.1 vs. ExPASy Swiss-Prot
Match: Q45W87 (Oleosin Ara h 11.0101 OS=Arachis hypogaea OX=3818 GN=Ahy_B10g105758 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-22
Identity = 65/110 (59.09%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 14  PSSHKVVQAATAVTAGGSLLVLSGLTMAATVIALAVATPLFVIFSPVLVPAAITVSLLMV 73
           P S ++V+A TAV AGGSLL+L+GL +A TVI L   TPLFVIFSPVLVPA ITV+LL +
Sbjct: 16  PRSTQLVKATTAVVAGGSLLILAGLVLAGTVIGLTTITPLFVIFSPVLVPAVITVALLGL 75

Query: 74  GFLASGGFGVAAVVVLSWFFRYMAGKRRGEGGDWPEKGRYRFGGKGREME 124
           GFLASGGFGVAA+ VL+W +RY+ GK    G +  +  R++  GK RE++
Sbjct: 76  GFLASGGFGVAAITVLTWIYRYVTGK-HPPGANQLDTARHKLMGKAREIK 124

The following BLAST results are available for this feature:

BLAST of Lag0032363.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605647.1	6.8e-33	71.67	Oleosin 14.9 kDa, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7035557.1	6.8e-33	71.67	Oleosin 14.9 kDa, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_011654853.1	9.9e-32	74.11	oleosin 1 [Cucumis sativus] >KGN50321.1 hypothetical protein Csa_000425 [Cucumis...	[more]
XP_023533015.1	2.4e-30	68.07	oleosin 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022159524.1	6.0e-29	68.70	oleosin 1-like [Momordica charantia]	[more]

BLAST of Lag0032363.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43804	4.9e-26	62.50	Oleosin 1 OS=Prunus dulcis OX=3755 GN=OLE1 PE=2 SV=1	[more]
Q9XHP2	1.4e-25	65.45	Oleosin L OS=Sesamum indicum OX=4182 PE=1 SV=1	[more]
Q43284	1.3e-23	61.90	Oleosin 14.9 kDa OS=Arabidopsis thaliana OX=3702 GN=OL3 PE=2 SV=2	[more]
P29111	8.7e-23	58.33	Major oleosin NAP-II (Fragment) OS=Brassica napus OX=3708 PE=1 SV=1	[more]
Q45W87	1.1e-22	59.09	Oleosin Ara h 11.0101 OS=Arachis hypogaea OX=3818 GN=Ahy_B10g105758 PE=1 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000136	Oleosin	PFAM	PF01277	Oleosin	coord: 18..121 e-value: 1.0E-36 score: 125.1
IPR000136	Oleosin	PANTHER	PTHR33203	OLEOSIN	coord: 8..123
IPR000136	Oleosin	PROSITE	PS00811	OLEOSINS	coord: 42..64
None	No IPR available	PANTHER	PTHR33203:SF25	OLEOSIN 18.5 KDA	coord: 8..123

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0032363	Lag0032363	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0032363.1.exon1	Lag0032363.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0032363.1	cds.Lag0032363.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0032363.1	Lag0032363.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019915	lipid storage
biological_process	GO:0019953	sexual reproduction
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0012511	monolayer-surrounded lipid storage body
cellular_component	GO:0005576	extracellular region