Lag0032033.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032033.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	MYB transcription factor
Location	chr11: 23023977 .. 23026414 (-)
Sequence length	804
RNA-Seq Expression	Lag0032033.1
Synteny	Lag0032033.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAACTGGATCAGATGAAGTTTTAAGGAAAGGGCCATGGAAGTTGGACGGAGATCGAGTGCTCTTGAACCATGTCAGGCGGTTTGGCCCCCGAGACTGGAGCTCCATTCGATCCAAAGGCCTTCTTCAGAGGATCGGCAAGTCCTGTCGTCTTCGTTGGGTCAATAAACTCAGACCCAACTTGAAAAAGTAAGTAATTCGTGCTTCACCGCCATTCATTTCCTTTTGATTCTTTCTCTCTTAGTTTTCTGTGGATGAGTTCGAAGATGTTTGATGTGGATTGAGGGTTTCGTGTTCACTTTTTGTTGTTTGTTCTACTATTTCGTGTACGAGTTTATTTGTGCCTGCATTCTGTTTGAGAAAATGTCTGAATGATTGATTTCTTGATTATGCTACTGCAAGTTCTGTTATGGATTTTTCTTCCACGAGATTCTGATTTCGTTTCTGAGAACGTGAGTTTATGTGTTTTGCTTTTCTGTATTCCCCCATTTCCAGCAAGTGGGTTGTGTTTGTTGTTTCTTAATTCTATTGTTTCGTCTACGAGTCTATATGTGCCTGCAAAGTGTGTGAAAATGTCTGAAAGAGTGATTTCTTGACCATGGTCCATGGTTTTGCAACTTCTATTCGTGACTTTTTATTTTCCCCCCTAAGATTCAGATTTACTTTCTTAGAATATGAGTTTGTGTTTGGTTTTCCTGTGCTCCCCCATTTCTAGAAAGTGGGTGCAAGTTCACGGCAGAGGAGGAAAGGGTGGTGATAGAATTGCAGGCCCAGTTTGGGAACAAATGGGCGAAGATAGTGACTTACCTTCCAGGCCGGACTGACAACGACATGAAGAATTTTTGGAGTAGCAGGCAGAAGAGACTGGCTAGGCTTCTGCAGACATCAACTACTCCATCTAAATTGCAGAGAAGCGTCAGAAAGGAAAATCCAGTTGATTTTGAGGTTCACAGAGCTCTGTGAAGGAGAAAGAAAGAAAAAAAAAGTCGCCGCCGGAGAGCGGTAGTCGCCGGCCGCCGGCCATGGCTGAATGAGTTGGAGAAGAAGAAGATGGTGGAGGAAGAAGAAAGGGAAGAAATGAGGGGGAAAAAGAAGAGTTGGAAAATGAAAATTTGTAAAAAAAAATATATTTTTAATTATTTTATTTTTAAATTTTAAAAATAAATTTTTAATAAAAAAAATAGGTGCCACATCAGCAAACCGTTAGTTTTTAACGGAAATATGGATAGAGGGACCAAAATGCTACTAAATGCAAACCTCAGGGACTAAAATGTTGAATTTGAAACCTCAGGGACCAAAACGAAACCTAAACCAAACCTTAGGGACCAAAAGTGTGTTTTTCCCTTTATTTAATTAGTTAAATATGATTTATTTAATTATGGATTTAATTAAAATTGTTTTAATTAAATTAAATTATATTTAATTTAATTGTTAAATTATATTTAATTTAATTGTTAAATTAAATTGAGGGAAAAATACACTTTTAGTCCTTGAGGTTTGAGTTAGGTTTCATTTTGGTTTCTGAGTTTTCAAACTTGACAATTTAGCGCCTGAGGTTTGAATTTCGTTTCATTTTAGTCTCTCCATCCATTTTTCTGTTAAAAAGTAACGGCTTGCTGGCGTGGTGCTATTTTTTATTAAAAAAAATTATTTTTTAATTTTTAAAATAAAATATTATTAATTTTAAATTTTTATTTCTTCTCTCTTCTTCATCATCATCATCAGCACACCAACCGCCCGCCGATGACTTTTTTCCTTCTTTTCTTCTTTTCTTTTCTCCTTCTTCTCCAACTATTCTTTTTGTTTTTTTTTTTAAACGAAACAAGGAGGGAGGTTTTTTTTCCCAAACCTAGCCTAGATCTGCAGTGTTGCAGTTTTTCCCGACTCCTTCGACTGCAAACCCAAACCAGCAAGGAACGAACTCCATCGCTGCCCAACCACGACGTCTCTACCAGCGCCTTCAGTTACTGCCGTCTTCAGTCTTCAATCGTGTCGCCGCCTTTGATCGAATGACAACACCCACCATGCCTTCATTTCCCTTCGTTCTGGTCTTAAGCAAAGGGGACTTTCGGATCTGGTCATTTCAAACCGATTCGAAGGGGCTTTCCACTAGAATCGCGTGGTGTCACGCAAAGGAGAAGAAAAATGGTTGTGGGCCTCGTGGGTGAGAGTTGCTGTCACGTAGAGGAAAAGAGAAAAATAGAAAGGAGTGGGCTAGGATTTCGGTCGAAAAAGAAGAAAGGGTTGCTGTTGCACGGTTTTCAGATCGGCGTGGGTAGGATTTCGGCTAGAGAAGAAGAAAACGGGCAAGATGGATGGAGAGGCAATGACACGAGGTCGGTGTGGGTTTTGCTTTAAAAATGGAAAGGAGGGCGGCTTGGGTTTCCTTTCTTCTTCTTTTTTTTTTTAGTGAAAGAAAGGAAGGGAATGTAG

mRNA sequence

ATGGAAGAAACTGGATCAGATGAAGTTTTAAGGAAAGGGCCATGGAAGTTGGACGGAGATCGAGTGCTCTTGAACCATGTCAGGCGGTTTGGCCCCCGAGACTGGAGCTCCATTCGATCCAAAGGCCTTCTTCAGAGGATCGGCAAGTCCTGTCGTCTTCGTTGGGTCAATAAACTCAGACCCAACTTGAAAAATGGGTGCAAGTTCACGGCAGAGGAGGAAAGGGTGGTGATAGAATTGCAGGCCCAGTTTGGGAACAAATGGGCGAAGATAGTGACTTACCTTCCAGGCCGGACTGACAACGACATGAAGAATTTTTGGAGTAGCAGGCAGAAGAGACTGGCTAGGCTTCTGCAGACATCAACTACTCCATCTAAATTGCAGAGAAGCGTCAGAAAGGAAAATCCAGTTGATTTTGAGTTTTTCCCGACTCCTTCGACTGCAAACCCAAACCAGCAAGGAACGAACTCCATCGCTGCCCAACCACGACGTCTCTACCAGCGCCTTCAGTTACTGCCGTCTTCAGTCTTCAATCGTGTCGCCGCCTTTGATCGAATGACAACACCCACCATGCCTTCATTTCCCTTCGTTCTGGTCTTAAGCAAAGGGGACTTTCGGATCTGGTCATTTCAAACCGATTCGAAGGGGCTTTCCACTAGAATCGCGTGGTGTCACGCAAAGGAGAAGAAAAATGGTTGTGGGCCTCGTGGATCGGCGTGGGTAGGATTTCGGCTAGAGAAGAAGAAAACGGGCAAGATGGATGGAGAGGCAATGACACGAGTGAAAGAAAGGAAGGGAATGTAG

Coding sequence (CDS)

ATGGAAGAAACTGGATCAGATGAAGTTTTAAGGAAAGGGCCATGGAAGTTGGACGGAGATCGAGTGCTCTTGAACCATGTCAGGCGGTTTGGCCCCCGAGACTGGAGCTCCATTCGATCCAAAGGCCTTCTTCAGAGGATCGGCAAGTCCTGTCGTCTTCGTTGGGTCAATAAACTCAGACCCAACTTGAAAAATGGGTGCAAGTTCACGGCAGAGGAGGAAAGGGTGGTGATAGAATTGCAGGCCCAGTTTGGGAACAAATGGGCGAAGATAGTGACTTACCTTCCAGGCCGGACTGACAACGACATGAAGAATTTTTGGAGTAGCAGGCAGAAGAGACTGGCTAGGCTTCTGCAGACATCAACTACTCCATCTAAATTGCAGAGAAGCGTCAGAAAGGAAAATCCAGTTGATTTTGAGTTTTTCCCGACTCCTTCGACTGCAAACCCAAACCAGCAAGGAACGAACTCCATCGCTGCCCAACCACGACGTCTCTACCAGCGCCTTCAGTTACTGCCGTCTTCAGTCTTCAATCGTGTCGCCGCCTTTGATCGAATGACAACACCCACCATGCCTTCATTTCCCTTCGTTCTGGTCTTAAGCAAAGGGGACTTTCGGATCTGGTCATTTCAAACCGATTCGAAGGGGCTTTCCACTAGAATCGCGTGGTGTCACGCAAAGGAGAAGAAAAATGGTTGTGGGCCTCGTGGATCGGCGTGGGTAGGATTTCGGCTAGAGAAGAAGAAAACGGGCAAGATGGATGGAGAGGCAATGACACGAGTGAAAGAAAGGAAGGGAATGTAG

Protein sequence

MEETGSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRPNLKNGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQTSTTPSKLQRSVRKENPVDFEFFPTPSTANPNQQGTNSIAAQPRRLYQRLQLLPSSVFNRVAAFDRMTTPTMPSFPFVLVLSKGDFRIWSFQTDSKGLSTRIAWCHAKEKKNGCGPRGSAWVGFRLEKKKTGKMDGEAMTRVKERKGM

Homology

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BLAST of Lag0032033.1 vs. NCBI nr
Match: XP_023520920.1 (transcription factor DUO1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.9 bits (681), Expect = 1.8e-67
Identity = 126/140 (90.00%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MEETGSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLR 60
           MEE+GS E LRKGPWKL+ D VLLNHV+RFGPRDWSSIRSKGLLQR GKSCRLRWVNKLR
Sbjct: 1   MEESGSQEALRKGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60

Query: 61  PNLKNGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQT 120
           PNLKNGCKFTAEEERVVIELQAQFGNKWAKI TYLPGRTDND+KNFWSSRQKRLARLLQ 
Sbjct: 61  PNLKNGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQN 120

Query: 121 STTPSKLQRSVRKENPVDFE 141
           STTPSKLQRS RKE PVDF+
Sbjct: 121 STTPSKLQRSTRKEKPVDFD 140

[Close]

BLAST of Lag0032033.1 vs. NCBI nr
Match: XP_022933030.1 (transcription factor DUO1-like [Cucurbita moschata])

HSP 1 Score: 266.5 bits (680), Expect = 2.4e-67
Identity = 131/163 (80.37%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MEETGSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLR 60
           MEE+GS E LRKGPWKL+ D VLLNHV+RFGPRDWSSIRSKGLLQR GKSCRLRWVNKLR
Sbjct: 1   MEESGSQEALRKGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60

Query: 61  PNLKNGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQT 120
           PNLKNGCKFTAEEERVVIELQAQFGNKWAKI TYLPGRTDND+KNFWSSRQKRLARLLQ 
Sbjct: 61  PNLKNGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQN 120

Query: 121 STTPSKLQRSVRKENPVDFEFFPTPSTANPNQQGTNSIAAQPR 164
           STTPSKLQRS RKE PVDF+    PS   P     +   A  R
Sbjct: 121 STTPSKLQRSTRKEKPVDFD---VPSMEAPKLSSASDGDASSR 160

[Close]

BLAST of Lag0032033.1 vs. NCBI nr
Match: XP_022973896.1 (transcription factor DUO1-like [Cucurbita maxima])

HSP 1 Score: 266.2 bits (679), Expect = 3.1e-67
Identity = 130/163 (79.75%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MEETGSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLR 60
           MEE+GS E LRKGPWKL+ D VLLNHV+RFGPRDWSSIRSKGLLQR GKSCRLRWVNKLR
Sbjct: 1   MEESGSQEALRKGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60

Query: 61  PNLKNGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQT 120
           PNLKNGCKFTAEEER+VIELQAQFGNKWAKI TYLPGRTDND+KNFWSSRQKRLARLLQ 
Sbjct: 61  PNLKNGCKFTAEEERIVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQN 120

Query: 121 STTPSKLQRSVRKENPVDFEFFPTPSTANPNQQGTNSIAAQPR 164
           STTPSKLQRS RKE PVDF+    PS   P     +   A  R
Sbjct: 121 STTPSKLQRSTRKEKPVDFD---VPSMEAPKLSSASDGDASSR 160

[Close]

BLAST of Lag0032033.1 vs. NCBI nr
Match: XP_038906713.1 (transcription factor DUO1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 258.1 bits (658), Expect = 8.5e-65
Identity = 123/140 (87.86%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MEETGSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLR 60
           MEE GS EVLRKGPWKL+ D VLLNHV RFGPRDWSSIRSKGLLQR GKSCRLRWVNKLR
Sbjct: 1   MEERGSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60

Query: 61  PNLKNGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQT 120
           PNLK GCKFTAEEERVVIELQAQ GNKWAKI TYLPGRTDND+KNFWSSRQKRLARLLQT
Sbjct: 61  PNLKKGCKFTAEEERVVIELQAQLGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQT 120

Query: 121 STTPSKLQRSVRKENPVDFE 141
           ST PSKLQRS +KE PV F+
Sbjct: 121 STAPSKLQRSAKKEKPVHFD 140

[Close]

BLAST of Lag0032033.1 vs. NCBI nr
Match: XP_022153189.1 (transcription factor DUO1 [Momordica charantia])

HSP 1 Score: 254.6 bits (649), Expect = 9.4e-64
Identity = 119/137 (86.86%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 2   EETGSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRP 61
           E    +EV+RKGPWKL+ D VLLNHV+RFGPRDWSSIRSKGLLQR GKSCRLRWVNKLRP
Sbjct: 3   ERVSEEEVIRKGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRP 62

Query: 62  NLKNGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQTS 121
           NLKNGCKFTAEEERVVIELQA+FGNKWAKI TYLPGRTDND+KNFWSSRQKRLARLLQ+S
Sbjct: 63  NLKNGCKFTAEEERVVIELQARFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQSS 122

Query: 122 TTPSKLQRSVRKENPVD 139
           TTPSKLQRS +KE PVD
Sbjct: 123 TTPSKLQRSTKKEKPVD 139

[Close]

BLAST of Lag0032033.1 vs. ExPASy Swiss-Prot
Match: A0A178VEK7 (Transcription factor DUO1 OS=Arabidopsis thaliana OX=3702 GN=DUO1 PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 6.0e-53
Identity = 93/118 (78.81%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 8   EVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRPNLKNGC 67
           E ++KGPWK + D VL+NHV+R+GPRDWSSIRSKGLLQR GKSCRLRWVNKLRPNLKNGC
Sbjct: 9   EEIKKGPWKAEEDEVLINHVKRYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKNGC 68

Query: 68  KFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQTSTTPS 126
           KF+A+EER VIELQ++FGNKWA+I TYLPGRTDND+KNFWSSRQKRLAR+L  S+  S
Sbjct: 69  KFSADEERTVIELQSEFGNKWARIATYLPGRTDNDVKNFWSSRQKRLARILHNSSDAS 126

[Close]

BLAST of Lag0032033.1 vs. ExPASy Swiss-Prot
Match: Q0JB89 (Probable transcription factor MYB58 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB58 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 9.5e-51
Identity = 94/115 (81.74%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 5   GSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRPNLK 64
           G  E LRKGPW  + D VLL HVR  GP DWSSIRSKGLL R GKSCRLRWVNKLRPNLK
Sbjct: 24  GGGEALRKGPWMAEEDEVLLEHVRTHGPMDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLK 83

Query: 65  NGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQ 120
           +GCKFTAEEERVVIELQAQFGNKWA+I TYL GRTDND+KNFWS+RQKRLARLL+
Sbjct: 84  SGCKFTAEEERVVIELQAQFGNKWARIATYLQGRTDNDVKNFWSTRQKRLARLLR 138

[Close]

BLAST of Lag0032033.1 vs. ExPASy Swiss-Prot
Match: Q9S773 (Transcription factor MYB97 OS=Arabidopsis thaliana OX=3702 GN=MYB97 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.4e-31
Identity = 73/175 (41.71%), Postives = 102/175 (58.29%), Query Frame = 0


Query: 5   GSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRPNLK 64
           G   VL+KGPW +  D  L  +VR +G  +W+S++ K  L R GKSCRLRW N LRPNL+
Sbjct: 14  GGGVVLKKGPWTVAEDETLAAYVREYGEGNWNSVQKKTWLARCGKSCRLRWANHLRPNLR 73

Query: 65  NGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQTSTTP 124
            G  FT EEER++I+L +Q GNKWA++   LPGRTDN++KN+W++R KR  R       P
Sbjct: 74  KG-SFTPEEERLIIQLHSQLGNKWARMAAQLPGRTDNEIKNYWNTRLKRFQRQGLPLYPP 133

Query: 125 SKLQRSVRKENPVDFEFFP-TPSTANPNQQGTNSIAAQPRRLYQRLQLLPSSVFN 179
              Q + ++      + +P  PS+  P+Q   +S       L Q   L P   +N
Sbjct: 134 EYSQNNHQQ------QMYPQQPSSPLPSQTPASSFTFP---LLQPPSLCPKRCYN 178

[Close]

BLAST of Lag0032033.1 vs. ExPASy Swiss-Prot
Match: Q94FL7 (Transcription factor MYB120 OS=Arabidopsis thaliana OX=3702 GN=MYB120 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.3e-30
Identity = 68/182 (37.36%), Postives = 100/182 (54.95%), Query Frame = 0


Query: 9   VLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRPNLKNGCK 68
           +L+KGPW    D +L  +VR  G  +W++++    L R GKSCRLRW N LRPNLK G  
Sbjct: 25  ILKKGPWTAAEDEILAAYVRENGEGNWNAVQKNTGLARCGKSCRLRWANHLRPNLKKG-S 84

Query: 69  FTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQTSTTPSKLQ 128
           FT +EER++I+L AQ GNKWA++   LPGRTDN++KN+W++R KRL R       P  + 
Sbjct: 85  FTGDEERLIIQLHAQLGNKWARMAAQLPGRTDNEIKNYWNTRLKRLLRQGLPLYPPDIIP 144

Query: 129 RSVRKENPVDFEFFPTPSTANPNQQGTNSIAAQPRRLYQRLQLLPSSVFNRVAAFDRMTT 188
                    + +  P P      Q   +    Q ++ +Q++   P S      +   + +
Sbjct: 145 ---------NHQLHPHPHHQQQQQHNHHHHHHQQQQQHQQMYFQPQSSQRNTPSSSPLPS 196

Query: 189 PT 191
           PT
Sbjct: 205 PT 196

[Close]

BLAST of Lag0032033.1 vs. ExPASy Swiss-Prot
Match: A2WW87 (Transcription factor GAMYB OS=Oryza sativa subsp. indica OX=39946 GN=GAM1 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-29
Identity = 57/112 (50.89%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 5   GSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRPNLK 64
           G    L+KGPW    D +L+++V++ G  +W++++    L R GKSCRLRW N LRPNLK
Sbjct: 35  GGGPPLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLK 94

Query: 65  NGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLAR 117
            G  FTAEEER++I+L ++ GNKWA++  +LPGRTDN++KN+W++R KR  R
Sbjct: 95  KGA-FTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQR 145

[Close]

BLAST of Lag0032033.1 vs. ExPASy TrEMBL
Match: A0A6J1F3T0 (transcription factor DUO1-like OS=Cucurbita moschata OX=3662 GN=LOC111439723 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 131/163 (80.37%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MEETGSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLR 60
           MEE+GS E LRKGPWKL+ D VLLNHV+RFGPRDWSSIRSKGLLQR GKSCRLRWVNKLR
Sbjct: 1   MEESGSQEALRKGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60

Query: 61  PNLKNGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQT 120
           PNLKNGCKFTAEEERVVIELQAQFGNKWAKI TYLPGRTDND+KNFWSSRQKRLARLLQ 
Sbjct: 61  PNLKNGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQN 120

Query: 121 STTPSKLQRSVRKENPVDFEFFPTPSTANPNQQGTNSIAAQPR 164
           STTPSKLQRS RKE PVDF+    PS   P     +   A  R
Sbjct: 121 STTPSKLQRSTRKEKPVDFD---VPSMEAPKLSSASDGDASSR 160

[Close]

BLAST of Lag0032033.1 vs. ExPASy TrEMBL
Match: A0A6J1I9W2 (transcription factor DUO1-like OS=Cucurbita maxima OX=3661 GN=LOC111472488 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.5e-67
Identity = 130/163 (79.75%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MEETGSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLR 60
           MEE+GS E LRKGPWKL+ D VLLNHV+RFGPRDWSSIRSKGLLQR GKSCRLRWVNKLR
Sbjct: 1   MEESGSQEALRKGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60

Query: 61  PNLKNGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQT 120
           PNLKNGCKFTAEEER+VIELQAQFGNKWAKI TYLPGRTDND+KNFWSSRQKRLARLLQ 
Sbjct: 61  PNLKNGCKFTAEEERIVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQN 120

Query: 121 STTPSKLQRSVRKENPVDFEFFPTPSTANPNQQGTNSIAAQPR 164
           STTPSKLQRS RKE PVDF+    PS   P     +   A  R
Sbjct: 121 STTPSKLQRSTRKEKPVDFD---VPSMEAPKLSSASDGDASSR 160

[Close]

BLAST of Lag0032033.1 vs. ExPASy TrEMBL
Match: A0A6J1DIB8 (transcription factor DUO1 OS=Momordica charantia OX=3673 GN=LOC111020746 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 4.6e-64
Identity = 119/137 (86.86%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 2   EETGSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRP 61
           E    +EV+RKGPWKL+ D VLLNHV+RFGPRDWSSIRSKGLLQR GKSCRLRWVNKLRP
Sbjct: 3   ERVSEEEVIRKGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRP 62

Query: 62  NLKNGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQTS 121
           NLKNGCKFTAEEERVVIELQA+FGNKWAKI TYLPGRTDND+KNFWSSRQKRLARLLQ+S
Sbjct: 63  NLKNGCKFTAEEERVVIELQARFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQSS 122

Query: 122 TTPSKLQRSVRKENPVD 139
           TTPSKLQRS +KE PVD
Sbjct: 123 TTPSKLQRSTKKEKPVD 139

[Close]

BLAST of Lag0032033.1 vs. ExPASy TrEMBL
Match: A0A5A7T9S7 (Myb-related protein 308-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002720 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 2.3e-63
Identity = 122/157 (77.71%), Postives = 132/157 (84.08%), Query Frame = 0


Query: 6   SDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRPNLKN 65
           S EVLRKGPWKL+ D VLLNHV RFGPRDWSSIRSKGLLQR GKSCRLRWVNKLRPNLKN
Sbjct: 8   SHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKN 67

Query: 66  GCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQTSTTPS 125
           GCKFTAEEE++VIELQAQFGNKWAKI TYLPGRTDND+KNFWSSRQKRLARLLQTS  PS
Sbjct: 68  GCKFTAEEEKMVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPS 127

Query: 126 KLQRSVRKENPVDFEFFPTPSTANPNQQGTNSIAAQP 163
           KLQRS +KE PVDF+  PT      +       +++P
Sbjct: 128 KLQRSAKKETPVDFD-IPTMEAPKLSSASEGESSSRP 163

[Close]

BLAST of Lag0032033.1 vs. ExPASy TrEMBL
Match: A0A1S3CB01 (myb-related protein 308-like OS=Cucumis melo OX=3656 GN=LOC103498816 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 2.3e-63
Identity = 122/157 (77.71%), Postives = 132/157 (84.08%), Query Frame = 0


Query: 6   SDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRPNLKN 65
           S EVLRKGPWKL+ D VLLNHV RFGPRDWSSIRSKGLLQR GKSCRLRWVNKLRPNLKN
Sbjct: 8   SHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKN 67

Query: 66  GCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQTSTTPS 125
           GCKFTAEEE++VIELQAQFGNKWAKI TYLPGRTDND+KNFWSSRQKRLARLLQTS  PS
Sbjct: 68  GCKFTAEEEKMVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSPAPS 127

Query: 126 KLQRSVRKENPVDFEFFPTPSTANPNQQGTNSIAAQP 163
           KLQRS +KE PVDF+  PT      +       +++P
Sbjct: 128 KLQRSAKKETPVDFD-IPTMEAPKLSSASEGESSSRP 163

[Close]

BLAST of Lag0032033.1 vs. TAIR 10
Match: AT3G60460.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 209.1 bits (531), Expect = 4.2e-54
Identity = 93/118 (78.81%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 8   EVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRPNLKNGC 67
           E ++KGPWK + D VL+NHV+R+GPRDWSSIRSKGLLQR GKSCRLRWVNKLRPNLKNGC
Sbjct: 6   EEIKKGPWKAEEDEVLINHVKRYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKNGC 65

Query: 68  KFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQTSTTPS 126
           KF+A+EER VIELQ++FGNKWA+I TYLPGRTDND+KNFWSSRQKRLAR+L  S+  S
Sbjct: 66  KFSADEERTVIELQSEFGNKWARIATYLPGRTDNDVKNFWSSRQKRLARILHNSSDAS 123

[Close]

BLAST of Lag0032033.1 vs. TAIR 10
Match: AT4G26930.1 (myb domain protein 97 )

HSP 1 Score: 136.0 bits (341), Expect = 4.6e-32
Identity = 73/175 (41.71%), Postives = 102/175 (58.29%), Query Frame = 0


Query: 5   GSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRPNLK 64
           G   VL+KGPW +  D  L  +VR +G  +W+S++ K  L R GKSCRLRW N LRPNL+
Sbjct: 14  GGGVVLKKGPWTVAEDETLAAYVREYGEGNWNSVQKKTWLARCGKSCRLRWANHLRPNLR 73

Query: 65  NGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQTSTTP 124
            G  FT EEER++I+L +Q GNKWA++   LPGRTDN++KN+W++R KR  R       P
Sbjct: 74  KG-SFTPEEERLIIQLHSQLGNKWARMAAQLPGRTDNEIKNYWNTRLKRFQRQGLPLYPP 133

Query: 125 SKLQRSVRKENPVDFEFFP-TPSTANPNQQGTNSIAAQPRRLYQRLQLLPSSVFN 179
              Q + ++      + +P  PS+  P+Q   +S       L Q   L P   +N
Sbjct: 134 EYSQNNHQQ------QMYPQQPSSPLPSQTPASSFTFP---LLQPPSLCPKRCYN 178

[Close]

BLAST of Lag0032033.1 vs. TAIR 10
Match: AT5G55020.1 (myb domain protein 120 )

HSP 1 Score: 132.1 bits (331), Expect = 6.6e-31
Identity = 68/182 (37.36%), Postives = 100/182 (54.95%), Query Frame = 0


Query: 9   VLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRPNLKNGCK 68
           +L+KGPW    D +L  +VR  G  +W++++    L R GKSCRLRW N LRPNLK G  
Sbjct: 25  ILKKGPWTAAEDEILAAYVRENGEGNWNAVQKNTGLARCGKSCRLRWANHLRPNLKKG-S 84

Query: 69  FTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLARLLQTSTTPSKLQ 128
           FT +EER++I+L AQ GNKWA++   LPGRTDN++KN+W++R KRL R       P  + 
Sbjct: 85  FTGDEERLIIQLHAQLGNKWARMAAQLPGRTDNEIKNYWNTRLKRLLRQGLPLYPPDIIP 144

Query: 129 RSVRKENPVDFEFFPTPSTANPNQQGTNSIAAQPRRLYQRLQLLPSSVFNRVAAFDRMTT 188
                    + +  P P      Q   +    Q ++ +Q++   P S      +   + +
Sbjct: 145 ---------NHQLHPHPHHQQQQQHNHHHHHHQQQQQHQQMYFQPQSSQRNTPSSSPLPS 196

Query: 189 PT 191
           PT
Sbjct: 205 PT 196

[Close]

BLAST of Lag0032033.1 vs. TAIR 10
Match: AT3G11440.1 (myb domain protein 65 )

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-30
Identity = 55/112 (49.11%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 5   GSDEVLRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRPNLK 64
           G   VL+KGPW    D +L+++V++ G  +W++++    L R GKSCRLRW N LRPNLK
Sbjct: 36  GKRSVLKKGPWTSTEDGILIDYVKKHGEGNWNAVQKHTSLARCGKSCRLRWANHLRPNLK 95

Query: 65  NGCKFTAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLAR 117
            G  F+ EEE++++E+ A+ GNKWA++  +LPGRTDN++KN+W++R KR  R
Sbjct: 96  KGA-FSQEEEQLIVEMHAKMGNKWAQMAEHLPGRTDNEIKNYWNTRIKRRQR 146

[Close]

BLAST of Lag0032033.1 vs. TAIR 10
Match: AT2G32460.1 (myb domain protein 101 )

HSP 1 Score: 130.2 bits (326), Expect = 2.5e-30
Identity = 55/107 (51.40%), Postives = 78/107 (72.90%), Query Frame = 0


Query: 10  LRKGPWKLDGDRVLLNHVRRFGPRDWSSIRSKGLLQRIGKSCRLRWVNKLRPNLKNGCKF 69
           L+KGPW    D +L  +VR+ G  +W++++    L R GKSCRLRW N LRPNLK G  F
Sbjct: 18  LKKGPWTTTEDAILTEYVRKHGEGNWNAVQKNSGLLRCGKSCRLRWANHLRPNLKKG-SF 77

Query: 70  TAEEERVVIELQAQFGNKWAKIVTYLPGRTDNDMKNFWSSRQKRLAR 117
           T +EE+++I+L A+ GNKWA++ + LPGRTDN++KN+W++R KR  R
Sbjct: 78  TPDEEKIIIDLHAKLGNKWARMASQLPGRTDNEIKNYWNTRMKRRQR 123

The following BLAST results are available for this feature:

BLAST of Lag0032033.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520920.1	1.8e-67	90.00	transcription factor DUO1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022933030.1	2.4e-67	80.37	transcription factor DUO1-like [Cucurbita moschata]	[more]
XP_022973896.1	3.1e-67	79.75	transcription factor DUO1-like [Cucurbita maxima]	[more]
XP_038906713.1	8.5e-65	87.86	transcription factor DUO1-like isoform X1 [Benincasa hispida]	[more]
XP_022153189.1	9.4e-64	86.86	transcription factor DUO1 [Momordica charantia]	[more]

BLAST of Lag0032033.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A178VEK7	6.0e-53	78.81	Transcription factor DUO1 OS=Arabidopsis thaliana OX=3702 GN=DUO1 PE=1 SV=1	[more]
Q0JB89	9.5e-51	81.74	Probable transcription factor MYB58 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q9S773	6.4e-31	41.71	Transcription factor MYB97 OS=Arabidopsis thaliana OX=3702 GN=MYB97 PE=2 SV=1	[more]
Q94FL7	9.3e-30	37.36	Transcription factor MYB120 OS=Arabidopsis thaliana OX=3702 GN=MYB120 PE=2 SV=1	[more]
A2WW87	1.2e-29	50.89	Transcription factor GAMYB OS=Oryza sativa subsp. indica OX=39946 GN=GAM1 PE=2 S...	[more]

BLAST of Lag0032033.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3T0	1.2e-67	80.37	transcription factor DUO1-like OS=Cucurbita moschata OX=3662 GN=LOC111439723 PE=...	[more]
A0A6J1I9W2	1.5e-67	79.75	transcription factor DUO1-like OS=Cucurbita maxima OX=3661 GN=LOC111472488 PE=4 ...	[more]
A0A6J1DIB8	4.6e-64	86.86	transcription factor DUO1 OS=Momordica charantia OX=3673 GN=LOC111020746 PE=4 SV...	[more]
A0A5A7T9S7	2.3e-63	77.71	Myb-related protein 308-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CB01	2.3e-63	77.71	myb-related protein 308-like OS=Cucumis melo OX=3656 GN=LOC103498816 PE=4 SV=1	[more]

BLAST of Lag0032033.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60460.1	4.2e-54	78.81	myb-like HTH transcriptional regulator family protein	[more]
AT4G26930.1	4.6e-32	41.71	myb domain protein 97	[more]
AT5G55020.1	6.6e-31	37.36	myb domain protein 120	[more]
AT3G11440.1	1.9e-30	49.11	myb domain protein 65	[more]
AT2G32460.1	2.5e-30	51.40	myb domain protein 101	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 65..113 e-value: 1.1E-9 score: 48.1 coord: 11..61 e-value: 0.0019 score: 27.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 68..111 score: 7.60753
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 7..59 score: 8.675871
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 14..59 e-value: 7.71709E-5 score: 37.555
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 68..107 e-value: 2.436E-8 score: 47.185
None	No IPR available	GENE3D	1.10.10.60		coord: 12..64 e-value: 1.5E-13 score: 52.4
None	No IPR available	GENE3D	1.10.10.60		coord: 67..137 e-value: 7.1E-16 score: 60.0
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 16..65 e-value: 2.5E-6 score: 27.6
None	No IPR available	PANTHER	PTHR47996	TRANSCRIPTION FACTOR DUO1	coord: 5..135
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 68..107 e-value: 5.2E-9 score: 36.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 60..115 score: 18.286449
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 7..55 score: 11.14001
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..107

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0032033	Lag0032033	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0032033.1.exon5	Lag0032033.1.exon5	exon
Lag0032033.1.exon4	Lag0032033.1.exon4	exon
Lag0032033.1.exon3	Lag0032033.1.exon3	exon
Lag0032033.1.exon2	Lag0032033.1.exon2	exon
Lag0032033.1.exon1	Lag0032033.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0032033.1	cds.Lag0032033.1_5	CDS
cds.Lag0032033.1	cds.Lag0032033.1_4	CDS
cds.Lag0032033.1	cds.Lag0032033.1_3	CDS
cds.Lag0032033.1	cds.Lag0032033.1_2	CDS
cds.Lag0032033.1	cds.Lag0032033.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0032033.1	Lag0032033.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044839	cell cycle G2/M phase transition
biological_process	GO:0055047	generative cell mitosis
biological_process	GO:0048235	pollen sperm cell differentiation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0048555	generative cell nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding