Lag0031924.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0031924.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr11: 19051235 .. 19054890 (+)
Sequence length771
RNA-Seq ExpressionLag0031924.1
SyntenyLag0031924.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATTGTGTACGAAACGCATTAGAGCACCGTAAGTGGAAGGTTGAGAGAAACTAATCGATGCTGAAAATATAGTTCACAAACATAAAACACCAGTTCCAATAATCGACTCAAGTTCGAAAATGTTGGTCACAATAAAGGAGTAGGAACTAGACCAGAAGTTGAGAATACAATAAGAATTGTTTTCTGGAAGAAGAAGTATCGATCATACCGCACCAGGAAAGAGCAAAGCAACGTTATCTTGTTCACTAAATTTTCACACTAACTTTTCTTCCATTAGTTTTACGCCATTAATTTCTTTACTCTTTTCATTTTTCTATTTATGATGGATTCGTTGGGCCTATCAAAGAAAGTGCTATATTGGTGAATTAAACATTCTCGAGGTTCCATGTGTTCTCACTTGGCCATGGGAACCTGTGTAAAACATATCGATCTAGTGCACATGATTTCCAATTTCAAACCAAAATGTATATAAGATATGATAGATTAAAAAATGATAAGAATTTAATTAAGTAGTAATTTTGATATTCGAAAACATGTCGTTACGTAATTATTAATCATCACGTGCGAAAACAACATCATGTCTACTTCTTAATTTAGAATTCGAAACTTCTTATATCTACTAACGACGATAAACAGTGAACTGCGAAGACAAACTGTAACGTCGACAATTCAAGGTAAAACTCGATTTCTCTAATTGTGAGGTTAATTGGGTTTTATTTGAGGAGTTTTGTGGGGGTTATGATTTATTTGATTGGGTCTTGGGCCGAATGGCAGGGTTGTAATTAAAAGAAGATTGGAGCCAAGCCACTTAAACCAAAGTATTTTTTTTCCGTTTTTATTTGAGCCGCATGCAGCCCAAGGAGGTTATCTTCTTCAACTCTCCACTCTTTCTCCTTCTCCTCCTTGCCATGACCTCTAAACTGCAGCAGCTACCTATTTTTTTAATTCCTTTTTCTTTCTTCCGTCACCAGCTGCGTCCTTCCCGTGGTTGCCTTCTCTGGCAAGCGCGACTCCTCCGGCGAGCAGGTCTTTCGTGGCGGCGCATCAACATGCAACAACGGCTATAGGTGTGTTCAGACCGTGGGTTCGTTTCGGCATGATTTGGGTTCGTTTCTCTCGGATTTTTCATCCTCAAGGTCGGGTTCTTTCATCCCTTTCGTTCTCTCTCTCACCCATGAACTTCCTCTCTATTTTTTCGGCAAGATTCAGGCTAGCAAAGGTTGTTTTTACATTTTTTCCGGTGGATGTGCAGTGTGGTCGCGCGACAGCAATAGTTTCGAGTCTTTTGTGGCGTTTTTCCAACAATTTCAAGCGTGGGTAAGTGAGAAAATTTATGTTTTGGTTAATTCAAGTGTGTTCGAAGATTATTCATTAGTTTTCGCCTTTGATTTCAAGGTCCCCTTTGCTTTTGGAGGTTTAATTGTCTCTTTGGAGCGGATTTGGAAGCTTGGACAACAAGCGTTATTGCTGTTTTAGGTGAGTTGTGGGAGTTAAAGCTCTCCCAAATTTAATTAACTTCTTATGCCACATGATTTAATAAGGTTAATGAGTTATAAGTATGTTTTTCCCCATTTAATGTAGTTGGTTAAGGGCTTGAAGGCTAAGGGAGTTTATTGTTTTGTCGAGCAACTTATTTAGTTAAGGTAAGTAGCAATTGGACTCAATTCTCGAGCTTCAGACCCAATGCATGATTGTTGGATTCGATTAAGTCAAGTCCTATGCTGTAAACTAATTCCCTTTGTGAATATAGCATGCTTGTAAGAGTTAGTTTAAAGCCTTGTGTTTGCTTTTGGGTTTAAGAGCGCATGGCGAGTTTCATTGCGAAGCATGATGTTGGCATGAAAAGTTGTTTTTTTTTTTGTTTAATTATAGCATATCTGAGACTGCTTCTTGATGGATTAGTACCTTTTAGATTATTTTGGAAACATGTTTGATTGTATGGCTTGGTTGTTCTGCATGGTTGGTTAGTTGTGGATGCGAGGTCTGTCTCGCTTTGGTTGTGGTAGTTCGAAGTACTTTCAAGTTTGTGGTTGGGCAGTATTGATCGTATAAGTGTTTTATCTGCTTTTCAAGTGATAGAAAAATTTGGGGTTCACCATATGTACGTCGTTATGCTGCCGAATTTTCGGTAGCATTACAATGAAAGTAAGACTGGCTTAGTAAAATCCCTCGATATGTTACGCTCGATAGTCGTACATATGAAGGAGGACAAGACATAGAATAGGAGCCCTAGCCGTGAATCAGGGCCTCAGGTAGACTTAGCAGATCGTTAAGCCTTATGTCAAGCAAGGGTTGTTTCCTTCCCCATCTTAGGACACTGATGGAACCTACTTTTCAGGCACGAGATCATGCATTCTACCAGTGACTGGTAGAGCTTACTTTTCTTGTACGGGATCATGCATTCCATCAGAACAGTGTCGAGCTAGGCCAGGATTGTGTGCTTGATGGTATTCAAGCATGCTTCATGCCCAAATTGCTCCACCATAGTTTGAGTTCATGATTCAGGGGTGTTGTGTAGGGGTAGGTGTAGTTCTGCTAGAGGTTGCCAACTAGTCCCTAGTTTACTTGTCTTACTCGACTGACCCACACAACACCATAGTTGGCACAAGTTGGGGACAGAAAACCACCCTAGGGAGAACATTATATGAACCCGAGTTTTGCCCTGGGGTTAGAAACCCGAATTTATGTTTCTAACTAGGTTCCTATGATGTTAAGACCAGCAAGCTAAGTTTCATGTTACCTGATTTTGCGATTATCAGATTCAACTCTTAAGTGGGCTACTTACTGAGTGTATCCTTATATACTCATCCATGCTACGTGACTTTCCTTTTCAGGTGGTACTTAAGGATGTTTAGCACTTGGCGAGGGCTGTGACTTCGGTTGCTATGGGATCGCAGGTGCAGTTTATGTCTCCATTTCTTTTATTATTCTAGTCTCTGTTGTCGTAAGATTGAACTCTTGTTTTAGATACAATGTTTTAAAACTATGAGTTTTCCAGAGTTTTGTTTCAGATGTTCTATTCTAGGATTTATGAACTTAACTTATGTTTTGGACCCTTTTGGTAAATGAAAGTTATATATATAAACCGCTTTGTGTTTGTTTAAAAAAAAATCTATGTTCATGATTTAGTAGCGACCTTCAACATATTTTAGCTTCCATCTAGTCGGGTCGTTACAGTTGGTATCAAAGCCCAGTTTATAGGTTCTGTAGACTCGCTGACATCGTAAGCATCAGATTTCCCCGTAGCCAAGCGCAAGTAATCACGCTTCTTCATCGCCAGGTATGTTAGTATTAAGTAGGAAATAGTGTTATTATGAATGATGGTCAATGTTATGCATGAAACTTGAGTTAGTTCAATCTACCTAGCTAGGATAAAATGAGCATTTTCTTGTTGTTTTCAGCGTGGAAGATACTTTACCATTTGATACCTTTTTCTTTTTAGACTATGCCTCCACGCGGTCGAAGACGTGGACGTGGTCGTGGCAGGGATCATGTACCTCCAGGTCAAGTAGATCCTTCTATGGATCATCATGCCGACAATCAACTAGAGGATGAGATGCCTGCACAGCCTGCACCCCCAACACAAGCACAAACGACCACCTTGACATTAGAATCTCTGCAGGCGCTCTTGAGTAATGTCGCTATCAATTAG

mRNA sequence

ATGACATTGTGTACGAAACGCATTAGAGCACCCTGCGTCCTTCCCGTGGTTGCCTTCTCTGGCAAGCGCGACTCCTCCGGCGAGCAGGTCTTTCGTGGCGGCGCATCAACATGCAACAACGGCTATAGGTGTGTTCAGACCGTGGGTTCGTTTCGGCATGATTTGGGTTCGTTTCTCTCGGATTTTTCATCCTCAAGGTCGGGTTCTTTCATCCCTTTCGTTCTCTCTCTCACCCATGAACTTCCTCTCTATTTTTTCGGCAAGATTCAGGCTAGCAAAGGTCCCCTTTGCTTTTGGAGGTTTAATTGTCTCTTTGGAGCGGATTTGGAAGCTTGGACAACAAGCGTTATTGCTGTTTTAGGCACGAGATCATGCATTCTACCAGTGACTGGTAGAGCTTACTTTTCTTGTACGGGATCATGCATTCCATCAGAACAGTGTCGAGCTAGGCCAGGATTTTGGTATCAAAGCCCAGTTTATAGGTTCTGTAGACTCGCTGACATCGTAAGCATCAGATTTCCCCGTAGCCAAGCGCAAGTAATCACGCTTCTTCATCGCCAGACTATGCCTCCACGCGGTCGAAGACGTGGACGTGGTCGTGGCAGGGATCATGTACCTCCAGGTCAAGTAGATCCTTCTATGGATCATCATGCCGACAATCAACTAGAGGATGAGATGCCTGCACAGCCTGCACCCCCAACACAAGCACAAACGACCACCTTGACATTAGAATCTCTGCAGGCGCTCTTGAGTAATGTCGCTATCAATTAG

Coding sequence (CDS)

ATGACATTGTGTACGAAACGCATTAGAGCACCCTGCGTCCTTCCCGTGGTTGCCTTCTCTGGCAAGCGCGACTCCTCCGGCGAGCAGGTCTTTCGTGGCGGCGCATCAACATGCAACAACGGCTATAGGTGTGTTCAGACCGTGGGTTCGTTTCGGCATGATTTGGGTTCGTTTCTCTCGGATTTTTCATCCTCAAGGTCGGGTTCTTTCATCCCTTTCGTTCTCTCTCTCACCCATGAACTTCCTCTCTATTTTTTCGGCAAGATTCAGGCTAGCAAAGGTCCCCTTTGCTTTTGGAGGTTTAATTGTCTCTTTGGAGCGGATTTGGAAGCTTGGACAACAAGCGTTATTGCTGTTTTAGGCACGAGATCATGCATTCTACCAGTGACTGGTAGAGCTTACTTTTCTTGTACGGGATCATGCATTCCATCAGAACAGTGTCGAGCTAGGCCAGGATTTTGGTATCAAAGCCCAGTTTATAGGTTCTGTAGACTCGCTGACATCGTAAGCATCAGATTTCCCCGTAGCCAAGCGCAAGTAATCACGCTTCTTCATCGCCAGACTATGCCTCCACGCGGTCGAAGACGTGGACGTGGTCGTGGCAGGGATCATGTACCTCCAGGTCAAGTAGATCCTTCTATGGATCATCATGCCGACAATCAACTAGAGGATGAGATGCCTGCACAGCCTGCACCCCCAACACAAGCACAAACGACCACCTTGACATTAGAATCTCTGCAGGCGCTCTTGAGTAATGTCGCTATCAATTAG

Protein sequence

MTLCTKRIRAPCVLPVVAFSGKRDSSGEQVFRGGASTCNNGYRCVQTVGSFRHDLGSFLSDFSSSRSGSFIPFVLSLTHELPLYFFGKIQASKGPLCFWRFNCLFGADLEAWTTSVIAVLGTRSCILPVTGRAYFSCTGSCIPSEQCRARPGFWYQSPVYRFCRLADIVSIRFPRSQAQVITLLHRQTMPPRGRRRGRGRGRDHVPPGQVDPSMDHHADNQLEDEMPAQPAPPTQAQTTTLTLESLQALLSNVAIN
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..218

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0031924Lag0031924gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0031924.1.exon1Lag0031924.1.exon1exon
Lag0031924.1.exon2Lag0031924.1.exon2exon
Lag0031924.1.exon3Lag0031924.1.exon3exon
Lag0031924.1.exon4Lag0031924.1.exon4exon
Lag0031924.1.exon5Lag0031924.1.exon5exon
Lag0031924.1.exon6Lag0031924.1.exon6exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0031924.1cds.Lag0031924.1CDS
cds.Lag0031924.1cds.Lag0031924.1_2CDS
cds.Lag0031924.1cds.Lag0031924.1_3CDS
cds.Lag0031924.1cds.Lag0031924.1_4CDS
cds.Lag0031924.1cds.Lag0031924.1_5CDS
cds.Lag0031924.1cds.Lag0031924.1_6CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0031924.1Lag0031924.1-proteinpolypeptide