Lag0031908.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTAAGTCAGAAAACCGAGGAGAAGCTACAGATAGTAAAGGGAAGAGTCAAGAATCGAGTTTCGGAACCCTTCTTCCATGGTGAAGAGGGGGTTTTATACCTGTTTGTCCTCCTAGGGTTTTTAGGAATTCGGTGGTGTTTCGGGGCGAACCAGGCGAAACCGGGGCGATTCGGGGCATCAGGGACCGAAAAGAGGTCACCGGGCTCGGCCCGCGCAAACGGGCCGAATGGTCGGCCTCGGCCTTTTGCCGAGGCCGACCATACGGGTCGGGTCATTTTGGCCCGACCCTTTGGTCCGGTCTTCCTCTGGGTCGGTCTTTTGGTCCTACCTCTGCCCGATTGTCCTCGTCAGCTTCTTGTCCATCTGTGTGGTCCAAAATCACCTATAACATTAAGCCCCCACTCTTGAATTGGGATTCAGGTGCGACTTTAATGCTATAGGCCGAGCTCCTTAAGCCAAATTTAAGAGTACAACTCTCGTCTCGTGCTGACTTTTGTATGACTTCTTTGTTATCCTGCAAGAGAGGGCGAGCTATGCAAAGTAAAAACTCCCTGAGTAGGGGTTAGGTGAAACGGAAATGAGAAGAGTGATAAGTTACAGAAGTGGCCGGAGGGCCTCTTTGGTCGGCCTCGGCCTCGGGAAGAGGCCGAGCACAACATTTTTCATTTTAGCTTGGTCGTTCGGAGTGCTTCATTCCATAATTAACAATAGGAAAAACAGAAAACTTCACAACCCTGCATTGAAAAGTTAATTCCTGCAAAAGAAAAACAAGGGAGGAGGCCCGGATCGGCCTGGGCCTCTAGCTCCTGTTAGCTCAGTGCTTAGCCCCCTGCATTCATATGTCAGTCCTTACTGGAAAATAATGGGAAAGTTGCATGATGATTACAACAAAGGAACGGAATAGCCTTAACCTACCCCTTATTCCCAGCCTCCACTCGACATGGGCATTTATTACCTCAAGCGTTGCATTTTTCGAGCAAGAAGGACTAGTTCCATACCTGGCCTTTTCGAAGGTGGATGGTCGGCCTCGGCCATGGCATGAGGCTGACCAGCAGCTCTGTACTATTTGCTCGCAGACGTCCAGGCTTATGTGCTAAAAAGTAAAGTGACTGTGCTAAAGTCACGCTGCCTTGAATGTGTGCCTGATGCTTGGCCTTGGAGTTGGGATGCTTGGCCTTGGCATGACGATGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCATGAGCCTCTCTTCAAGCTGTCATAGTCATCTCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCATGAGCCTCTCTTCAAGCTGTCATAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATAGTCATCCTAGGGGTGTGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCGAGGAAATTCTCGAGCCTCTCTTCAAGCTGTCATAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCAGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGAGGAAAGGCTTGGGGAGGCCAAGGAAATTCCAGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTAGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCAGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCAGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTATCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGCTGTATTCATCCCGAGGGTGCGTACACTCAGTCGGGGGAAGTGCAGAAGTCTGGCCTCTACAAGGATCATTCTCGTCTGGCCACACGCGTTACATCCACGAAGAAACGCCACGGACATGTGTTATACAACACGAAAGGAAAATCAAAACTGTCGCCACAAGACCGTGGACTCGACCTGTCCTTACCCCTACCCCCCACTCAAAATGTGCATTCAATATCTTGGACATGCATTTTTTGA ATGCCTAAGTCAGAAAACCGAGGAGAAGCTACAGATAGTAAAGGGAAGAGTCAAGAATCGAGTTTCGGAACCCTTCTTCCATGGAATTCGGTGGTGTTTCGGGGCGAACCAGGCGAAACCGGGGCGATTCGGGGCATCAGGGACCGAAAAGAGGTCACCGGGCTCGGCCCGCGCAAACGGGCCGAATGGTCGGCCTCGGCCTTTTGCCGAGGCCGACCATACGGGTCGGGTCATTTTGGCCCGACCCTTTGGTCCGGTCTTCCTCTGGGTCGGTCTTTTGGTCCTACCTCTGCCCGATTGTCCTCGTCAGCTTCTTGTCCATCTGTGTGGTCCAAAATCACCTATAACATTAAGCCCCCACTCTTGAATTGGGATTCAGACGTCCAGGCTTATGTGCTAAAAAGTAAAGTGACTGTGCTAAAGTCACGCTGCCTTGAATGTGTGCCTGATGCTTGGCCTTGGAGTTGGGATGCTTGGCCTTGGCATGACGATGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCATGAGCCTCTCTTCAAGCTGTCATAGTCATCTCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCATGAGCCTCTCTTCAAGCTGTCATAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATAGTCATCCTAGGGGTGTGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCGAGGAAATTCTCGAGCCTCTCTTCAAGCTGTCATAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCAGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGAGGAAAGGCTTGGGGAGGCCAAGGAAATTCCAGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTAGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCAGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCAGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTATCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGCTGTATTCATCCCGAGGGTGCGTACACTCAGTCGGGGGAAGTGCAGAAGTCTGGCCTCTACAAGGATCATTCTCGTCTGGCCACACGCGTTACATCCACGAAGAAACGCCACGGACATGTGTTATACAACACGAAAGGAAAATCAAAACTGTCGCCACAAGACCGTGGACTCGACCTGTCCTTACCCCTACCCCCCACTCAAAATGTGCATTCAATATCTTGGACATGCATTTTTTGA ATGCCTAAGTCAGAAAACCGAGGAGAAGCTACAGATAGTAAAGGGAAGAGTCAAGAATCGAGTTTCGGAACCCTTCTTCCATGGAATTCGGTGGTGTTTCGGGGCGAACCAGGCGAAACCGGGGCGATTCGGGGCATCAGGGACCGAAAAGAGGTCACCGGGCTCGGCCCGCGCAAACGGGCCGAATGGTCGGCCTCGGCCTTTTGCCGAGGCCGACCATACGGGTCGGGTCATTTTGGCCCGACCCTTTGGTCCGGTCTTCCTCTGGGTCGGTCTTTTGGTCCTACCTCTGCCCGATTGTCCTCGTCAGCTTCTTGTCCATCTGTGTGGTCCAAAATCACCTATAACATTAAGCCCCCACTCTTGAATTGGGATTCAGACGTCCAGGCTTATGTGCTAAAAAGTAAAGTGACTGTGCTAAAGTCACGCTGCCTTGAATGTGTGCCTGATGCTTGGCCTTGGAGTTGGGATGCTTGGCCTTGGCATGACGATGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCATGAGCCTCTCTTCAAGCTGTCATAGTCATCTCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCATGAGCCTCTCTTCAAGCTGTCATAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATAGTCATCCTAGGGGTGTGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCGAGGAAATTCTCGAGCCTCTCTTCAAGCTGTCATAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCAGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGAGGAAAGGCTTGGGGAGGCCAAGGAAATTCCAGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTAGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCAGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCAGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTATCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGCTGTATTCATCCCGAGGGTGCGTACACTCAGTCGGGGGAAGTGCAGAAGTCTGGCCTCTACAAGGATCATTCTCGTCTGGCCACACGCGTTACATCCACGAAGAAACGCCACGGACATGTGTTATACAACACGAAAGGAAAATCAAAACTGTCGCCACAAGACCGTGGACTCGACCTGTCCTTACCCCTACCCCCCACTCAAAATGTGCATTCAATATCTTGGACATGCATTTTTTGA MPKSENRGEATDSKGKSQESSFGTLLPWNSVVFRGEPGETGAIRGIRDRKEVTGLGPRKRAEWSASAFCRGRPYGSGHFGPTLWSGLPLGRSFGPTSARLSSSASCPSVWSKITYNIKPPLLNWDSDVQAYVLKSKVTVLKSRCLECVPDAWPWSWDAWPWHDDAYTLLGKSLGRPRKFMSLSSSCHSHLRGAYTLLGKSLGRPRKFMSLSSSCHSHPRGAYTLLGKSLGRPRKFPSLSSSCHSHPRGVYTLLGKSLGRPRKFSSLSSSCHSHPRGAYTLLGKGLGRPRKFPSLSSSCHGHPRGAYTLLGKGLGRPRKFQSLSSSCHGHPRGAYTLLRKGLGRPRKFQSLSSSCHGHPRGAYTLLGKGLGRPRKFPSLSSSCHGHPRGAYTLLGKGLGRPRKFPSLSSSCHGHPRGAYTLLGKGLGRPRKFQSLSSSCHGHPRGAYTLLGKGLGRPRKFQSLSSSCHGHPRGAYTLLGKGLGRPRKFPSLSSSYHGHPRGAYTLLGKGLGRPRKFPSLSSSCHGHPRGAYTLLGKGLGRPRKFPSLSSSCCIHPEGAYTQSGEVQKSGLYKDHSRLATRVTSTKKRHGHVLYNTKGKSKLSPQDRGLDLSLPLPPTQNVHSISWTCIF Homology
BLAST of Lag0031908.1 vs. NCBI nr
Match: XP_033736132.1 (uncharacterized protein LOC117324396 [Pecten maximus]) HSP 1 Score: 97.1 bits (240), Expect = 5.9e-16 Identity = 89/355 (25.07%), Postives = 130/355 (36.62%), Query Frame = 0
BLAST of Lag0031908.1 vs. NCBI nr
Match: PWV06054.1 (hypothetical protein C3747_120g5 [Trypanosoma cruzi]) HSP 1 Score: 73.6 bits (179), Expect = 7.0e-09 Identity = 81/317 (25.55%), Postives = 128/317 (40.38%), Query Frame = 0
BLAST of Lag0031908.1 vs. NCBI nr
Match: BAK05521.1 (predicted protein, partial [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 70.1 bits (170), Expect = 7.8e-08 Identity = 97/312 (31.09%), Postives = 124/312 (39.74%), Query Frame = 0
BLAST of Lag0031908.1 vs. NCBI nr
Match: XP_020199045.1 (collagen alpha-1(I) chain [Aegilops tauschii subsp. strangulata]) HSP 1 Score: 68.6 bits (166), Expect = 2.3e-07 Identity = 93/304 (30.59%), Postives = 120/304 (39.47%), Query Frame = 0
BLAST of Lag0031908.1 vs. NCBI nr
Match: KAF6998140.1 (hypothetical protein CFC21_014287 [Triticum aestivum]) HSP 1 Score: 68.6 bits (166), Expect = 2.3e-07 Identity = 93/304 (30.59%), Postives = 120/304 (39.47%), Query Frame = 0
BLAST of Lag0031908.1 vs. ExPASy TrEMBL
Match: A0A6Q2ZHZ9 (Uncharacterized protein OS=Esox lucius OX=8010 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.6e-14 Identity = 123/389 (31.62%), Postives = 163/389 (41.90%), Query Frame = 0
BLAST of Lag0031908.1 vs. ExPASy TrEMBL
Match: A0A3P8P8U8 (Uncharacterized protein OS=Astatotilapia calliptera OX=8154 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 6.6e-13 Identity = 73/246 (29.67%), Postives = 93/246 (37.80%), Query Frame = 0
BLAST of Lag0031908.1 vs. ExPASy TrEMBL
Match: A0A2V2WH94 (Uncharacterized protein OS=Trypanosoma cruzi OX=5693 GN=C3747_120g5 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.4e-09 Identity = 81/317 (25.55%), Postives = 128/317 (40.38%), Query Frame = 0
BLAST of Lag0031908.1 vs. ExPASy TrEMBL
Match: A0A673XVP5 (Uncharacterized protein OS=Salmo trutta OX=8032 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.4e-09 Identity = 130/402 (32.34%), Postives = 166/402 (41.29%), Query Frame = 0
BLAST of Lag0031908.1 vs. ExPASy TrEMBL
Match: F2EDU9 (Predicted protein (Fragment) OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.8e-08 Identity = 97/312 (31.09%), Postives = 124/312 (39.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|