Lag0031633.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0031633.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrotransposon gag protein
Locationchr11: 11089662 .. 11094912 (+)
Sequence length2160
RNA-Seq ExpressionLag0031633.1
SyntenyLag0031633.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTATGGCCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTTTATCGCCTCAAAGTAACAAGTGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCAATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCCGTCATGTATGAAGAGGAAGTTCTTTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTATTATCTTGACCAATCCTACAAGTCAAGGACCTGATCAAGACCATGATGAAGATAAGAGCTTTTAAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAAATTTTGAACTACGTTATGACTTGATCCCTTTTCTTCAAAGGGTACGTAGGCAACTTAAAAAAACTTTAAGTTCAGTCTCTGCAAACAAAAAAAAAGTGCAACAAACATTGAAACACGACAATACAAATTGAAGAAGTTAATCACTACTGGGGGCAACACAACAAATTGAAGTTGTGCACCGTTATGAATATGAAGCTACGAGTTGGATGAATAAAAGAAGATTTCATTCCTCCAAATTCAATGCCTCGCTAGTCTCAAGTTCGGTGATTCACTCACCCTAAGTTCGTGCATTCCTTCTTTCAAGTTTGAAGGTTCTCACGTGTTTCGCTGCAGTTCCTTTTCTCCAAGTACGAAGGTGCTCCTTCTCCAAGTTCGAAGGCTCTTACATTGCTGCGATGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGTGTTCTGCTACAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCGAAGTCGAAGGTTCTCACGTTGCTTCACTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCTCACGTTGCTTCGCTGCAGTTCCTTCCTACAAGTTTGAAGGTTTTCATGCGCTTTGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCATTTCGCTACAGTTCATTTCCTCCAAGTTCAAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACACGTTTCGCAGAAGTTCCTTCCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTTGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCTCTTCGCTGCGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCTACCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCGCTCCGTTGCTACTTCTCCAAGTTTGAAGGTGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCATTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGGCCTCATTCCACTCCATCTCAAATGTTGGCAGTTGACGGCGTCCGCTGCTCTTCATCTTCAAATGTTGGCAGTTGACGGCGTCCGCTTCGCTTCATCTTCAAAAATTGACTGTTGATAACTTCACTTCATATTCAAAAGTTGACGGTTGAAGTCTTCGCTACATCTGCAAAGATGAACAACTTTAGTGTTGCCTTTATCTTGAAAGTGTCTAGACTGGAAGATGCATCTTAGCTGCAAGTTAAAAAAAATGCTTGATATCAAACTACAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGACAATAAAGGTGTTGTTAAAAATGGTGACCACACCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAGTCACTGCAATTGAATCTGATGACGACCTTGTAGGCGAGTCTGGTGATCACACCTTCAAGATACTATAGTCATCAAAGTGACTGGTTTAGACAGGTGACGAAGTCACTGCAAGTGAATCTGATGAGGACCGTTGTAGGCGAGTCGAGTCTGGTGACCACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTTAGCATGAGTGCATCACTTTAGGCAAATCTGGTGACTACCCCTGCAGGTTACTTAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATAGGGACTGGTCTAGCATGAGTGCATCACTGTAGGCAAATCTGGTGACTACCCCTGCAGGTTACTTAGATCACCAGATAAAATGGGGACTGGTCTAGTAGGAATGCATTACTGAAGGCGAATCTAGTGACTACCCCTGCAGGTTACTTAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCGTCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCGTCATTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCTAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGCAAATCTGGTGACTACCCCGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGTAGGAGTGCATCACTGTAGGCAAATCCGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGTGACTACTCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGTAGGAATGCATCACTGTAGGCAAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATAACTGTAGGCAAATCTAGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGAGGACTGATCTAGCAGGAGTGCATCATTGAAGGCGAATCTGGTGACTACCCCTGCAGGCTACTCAGATCATCCAATAAAATAGGGGACTAGTCTAGCAGGAGTGAAATCACTGCAAGCAAATTTGGTGACGATTGTTGCACGAAGCTTACTCATTCAAGGAAGAAAGAAACAAATTGCAAAAAAAAAAAAAAAAAAAACCAAAAATTAAAAAAAAATTGAAAATTAAGAAAAAAAGAAAAGAAAAAAAAAAGAAAATTAAAAAAAAAAGAAAAAACGAAAATAAAAATAAAAAAAGAAAAGAAAGAAAGTTTCCTACTTGGATCCCTTCTTGAATGCTCTCTGCAATTGATGTGTGCTCTCCCCTACTGAGGTTCAGTCTTATTTATAGAGGGGAGTTTTAAGTTCAAATCAAAGGGTTAGATAAAGATTTGATTCAAATGAAATCATATCTCCGGTTCAAAATTTTATGAGATAATCTTTATCTTTATCTGAACCGACTTGATTAAATTGAAATTCCTAAAAGATAAGTGTTTCAATTCAAATCAATTTGGGAATTAAAATTTTATCTAAATAATTTTATTTATCTATTTTATTTGGGCATACTCCAAATTTTTCTTCCAAATCAAAATTTGAGATTCAAACATCAAATTCTATTCCAAATGCAAGTTTGAATTTGGTAAAATTTTACCTCAAATTAAATTTTGGGCCATAATTCAAATTTCTATCCCAAATGGACTAGAGTTCAAACCTCAAGTTCTATTCCATATGCAAGTTAAAATTGGGTAGGATTTTACCTCAAATCAAAATTTGGGTATAAATCAAATTTTGCCCAAACTTGAAATCAAAGTTTGCTGCCAAACAAGGAAAATCAAAATTTTGACCAAACCTCAAATTTTGATTAATTGGCGATAAAAGTGTGTCAAATAAAAAAATCAAAATTTTGACCAAAATTCATATTTTGATTAAATTGACACACCAAATGGAGTCAAAGTCAAGAACAAATACCTTGCATTTTAATTCCAAAATATATTTTCGAGATTCACTCCCACATAACTTGTGCCTAAATCTCGAAAAGGGGGCATTTGTTGAAGGAGAAATTTCGGCCAATCACAAATTGCCACGTCATTAATATAAATTAATGATAAAATAAATTTGGGACCAATTACACATTTACACGTGTGCCTAAACTAAATTAATAGACACTAAAATTCGGCAAATCAAAGAATGTCACTTGTCTATTAGTGATCCATCAGATAACATCAGCCAAGTTCAATCAAATTATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGGTCCATCAAACTCTATAAATAGAGGAGCCACCATTCATTTAGAGGGGATTCAGGTTCAGAAATTCTAGACTCTCACAAAGACAAGAGTTCAGAGTTTTCAAAGCTCTCAAGCAGAACCAGAGAATTCAGAGAGACTCCACCAAGTCTGAAGACCGAAGAATCTCTGCAATCCACAAGTCCAAGTGTTGAACACTTTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTTGAAGACCAAACACCCTTCAAGACTTCAACACTCCTTGAAGATCAAATACTCTTCAGGACATCAACACTTCTTGAAGACCAAACGCTCTTCAAGACCTCAACACTCCTTGAAGATCAAAACTCTTCAGGACATCAACATTTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGACTCCTTCAAGACTAGAAGATCTCAAGCTCCAAGAATCCATTGAAGCTTCAGACTCAGGATCGAGCGTTCCGGCCCTCGAGTGA

mRNA sequence

ATGAGTATGGCCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTTTATCGCCTCAAAGTAACAAGTGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCAATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCCGTCATGTATGAAGAGGAAGTTCTTTGTTCTCATAAATACAGAAGGTTCCTTGAAGAAGATTTCATTCCTCCAAATTCAATGCCTCGCTAGTCTCAAGTTCGGTGATTCACTCACCCTAAGTTCGTGCATTCCTTCTTTCAAGTTTGAAGGTTCTCACGTGTTTCGCTGCAGTTCCTTTTCTCCAAGTACGAAGGTGCTCCTTCTCCAAGTTCGAAGGCTCTTACATTGCTGCGATGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGTGTTCTGCTACAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCGAAGTCGAAGGTTCTCACGTTGCTTCACTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCTCACGTTGCTTCGCTGCAGTTCCTTCCTACAAGTTTGAAGGTTTTCATGCGCTTTGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCATTTCGCTACAGTTCATTTCCTCCAAGTTCAAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCTCTTCGCTGCGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCTACCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCGCTCCGTTGCTACTTCTCCAAGTTTGAAGGTGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCATTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGGCCTCATTCCACTCCATCTCAAATGTTGGCAGTTGACGGCGTCCGCTGCTCTTCATCTTCAAATGTTGGCAGTTGACGGCGTCCGCTTCGCTTCATCTTCAAAAATTGACTGTGACGAAGTCACTGCAAGTGAATCTGATGAGGACCGTTGTAGGCGAGTCGAGTCTGGTGACCACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGCAAATCTGGTGACTACCCCTGCAGGTTACTTAGATCACCAGATAAAATGGGGACTGGTCTAGAGTGCGTCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGAGTGCATCACTGAAGGCAAATCTGGTGACTACCCCGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGAGTGCATCACTGTAGGCAAATCTGGTGACTACTCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGTAGGAATGCATCACTGTAGGCAAATCTGGACATCAACACTTCTTGAAGACCAAACGCTCTTCAAGACCTCAACACTCCTTGAAGATCAAAACTCTTCAGGACATCAACATTTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGACTCCTTCAAGACTAGAAGATCTCAAGCTCCAAGAATCCATTGAAGCTTCAGACTCAGGATCGAGCGTTCCGGCCCTCGAGTGA

Coding sequence (CDS)

ATGAGTATGGCCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTTTATCGCCTCAAAGTAACAAGTGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCAATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCCGTCATGTATGAAGAGGAAGTTCTTTGTTCTCATAAATACAGAAGGTTCCTTGAAGAAGATTTCATTCCTCCAAATTCAATGCCTCGCTAGTCTCAAGTTCGGTGATTCACTCACCCTAAGTTCGTGCATTCCTTCTTTCAAGTTTGAAGGTTCTCACGTGTTTCGCTGCAGTTCCTTTTCTCCAAGTACGAAGGTGCTCCTTCTCCAAGTTCGAAGGCTCTTACATTGCTGCGATGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGTGTTCTGCTACAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCGAAGTCGAAGGTTCTCACGTTGCTTCACTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCTCCTCCAAGTCGAAGGTTCTCTCACGTTGCTTCGCTGCAGTTCCTTCCTACAAGTTTGAAGGTTTTCATGCGCTTTGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCATTTCGCTACAGTTCATTTCCTCCAAGTTCAAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCTCTTCGCTGCGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCTACCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCGCTCCGTTGCTACTTCTCCAAGTTTGAAGGTGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCATTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGGCCTCATTCCACTCCATCTCAAATGTTGGCAGTTGACGGCGTCCGCTGCTCTTCATCTTCAAATGTTGGCAGTTGACGGCGTCCGCTTCGCTTCATCTTCAAAAATTGACTGTGACGAAGTCACTGCAAGTGAATCTGATGAGGACCGTTGTAGGCGAGTCGAGTCTGGTGACCACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGCAAATCTGGTGACTACCCCTGCAGGTTACTTAGATCACCAGATAAAATGGGGACTGGTCTAGAGTGCGTCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGAGTGCATCACTGAAGGCAAATCTGGTGACTACCCCGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGAGTGCATCACTGTAGGCAAATCTGGTGACTACTCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGTAGGAATGCATCACTGTAGGCAAATCTGGACATCAACACTTCTTGAAGACCAAACGCTCTTCAAGACCTCAACACTCCTTGAAGATCAAAACTCTTCAGGACATCAACATTTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGACTCCTTCAAGACTAGAAGATCTCAAGCTCCAAGAATCCATTGAAGCTTCAGACTCAGGATCGAGCGTTCCGGCCCTCGAGTGA

Protein sequence

MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSLKKISFLQIQCLASLKFGDSLTLSSCIPSFKFEGSHVFRCSSFSPSTKVLLLQVRRLLHCCDAVPSLQVQRFSRVLLQFLLSKYEGSLLEVEGSHVASLQLLPPSSKVLTLLRRSSFSPSSKVLSSKSKVLSRCFAAVPSYKFEGFHALCCSSFSPSSKVLTHFATVHFLQVQRFSRASVKFLPPSLKVLTCFGEVPSSQVRRFLRASLQFLPPSSKFLPPSSKVLMLFAAQFLPPSSKVLMRFAATFLQVRRFPHALLSTAPSPSSKALRSVATSPSLKVLLSTTPSPSSKALLSTAPSPSSKVLLSTPHFEGSPLRFSFSKFEGSPLLLFKCLAAVDGLIPLHLKCWQLTASAALHLQMLAVDGVRFASSSKIDCDEVTASESDEDRCRRVESGDHPCRLLRSPNKMGTGLAGVHHCRQIWSASLKANLVTTPAGKSGDYPCRLLRSPDKMGTGLECVTEGESGDYPCRLLRSPNKMGTGLAGECITEGKSGDYPAGYSDHPIKWGLECITVGKSGDYSCRLLRSPNKMGTGLVGMHHCRQIWTSTLLEDQTLFKTSTLLEDQNSSGHQHFLKTKHSSRLQHSLKIKDSSGHQHFLKTPSRLEDLKLQESIEASDSGSSVPALE
Homology
[Close]
BLAST of Lag0031633.1 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 3.8e-19
Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = 0 

Query: 1   MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEV 60
           +SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS F RLK+T+DQ +R+M +L+ 
Sbjct: 151 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 210

Query: 61  KLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL 95
           K F+E N D K+ S +PS MKRK  V INTEGSL
Sbjct: 211 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSL 244

[Close]
BLAST of Lag0031633.1 vs. NCBI nr
Match: KAA0050734.1 (gag protease polyprotein [Cucumis melo var. makuwa] >TYJ95698.1 gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 3.8e-19
Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = 0 

Query: 1   MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEV 60
           +SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS F RLK+T+DQ +R+M +L+ 
Sbjct: 92  LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 151

Query: 61  KLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL 95
           K F+E N D K+ S +PS MKRK  V INTEGSL
Sbjct: 152 KPFHEENGDDKIHSRVPSRMKRKLSVDINTEGSL 185

[Close]
BLAST of Lag0031633.1 vs. NCBI nr
Match: KAA0036008.1 (Retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 8.6e-19
Identity = 57/94 (60.64%), Postives = 72/94 (76.60%), Query Frame = 0 

Query: 1   MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEV 60
           +SMA  EEENQC +ST+ R SAF+RLS+STSKK +PSTS F RLK+T+DQ +R+M + + 
Sbjct: 92  LSMATKEEENQCPMSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSFKA 151

Query: 61  KLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL 95
           K F+E N D K+ S +PS MKRK  V INTEGSL
Sbjct: 152 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSL 185

[Close]
BLAST of Lag0031633.1 vs. NCBI nr
Match: TYK16519.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-18
Identity = 57/94 (60.64%), Postives = 71/94 (75.53%), Query Frame = 0 

Query: 1   MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEV 60
           +SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS F RLK+T++Q KR+M + + 
Sbjct: 422 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNNQQKREMKSFKA 481

Query: 61  KLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL 95
           K F+E N D K+ S +PS MKRK  V INTEGSL
Sbjct: 482 KPFHEQNDDNKIHSRVPSRMKRKLSVDINTEGSL 515

[Close]
BLAST of Lag0031633.1 vs. NCBI nr
Match: TYK00108.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-18
Identity = 57/94 (60.64%), Postives = 72/94 (76.60%), Query Frame = 0 

Query: 1   MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEV 60
           +SMA  EE+NQC  ST TR SAF+RLS+STSKK +PSTS F R+K+ +DQ +R+M +L+ 
Sbjct: 151 LSMATKEEKNQCPTSTCTRTSAFKRLSISTSKKDRPSTSAFDRVKMINDQQQREMKSLKA 210

Query: 61  KLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL 95
           K F+E N D K+ S +PS MKRK FV INTEGSL
Sbjct: 211 KPFHEENDDDKIHSRVPSRMKRKLFVDINTEGSL 244

[Close]
BLAST of Lag0031633.1 vs. ExPASy TrEMBL
Match: A0A5D3BBF9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00250 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-19
Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = 0 

Query: 1   MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEV 60
           +SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS F RLK+T+DQ +R+M +L+ 
Sbjct: 92  LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 151

Query: 61  KLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL 95
           K F+E N D K+ S +PS MKRK  V INTEGSL
Sbjct: 152 KPFHEENGDDKIHSRVPSRMKRKLSVDINTEGSL 185

[Close]
BLAST of Lag0031633.1 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-19
Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = 0 

Query: 1   MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEV 60
           +SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS F RLK+T+DQ +R+M +L+ 
Sbjct: 151 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 210

Query: 61  KLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL 95
           K F+E N D K+ S +PS MKRK  V INTEGSL
Sbjct: 211 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSL 244

[Close]
BLAST of Lag0031633.1 vs. ExPASy TrEMBL
Match: A0A5A7SZJ7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18735G00010 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-19
Identity = 57/94 (60.64%), Postives = 72/94 (76.60%), Query Frame = 0 

Query: 1   MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEV 60
           +SMA  EEENQC +ST+ R SAF+RLS+STSKK +PSTS F RLK+T+DQ +R+M + + 
Sbjct: 92  LSMATKEEENQCPMSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSFKA 151

Query: 61  KLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL 95
           K F+E N D K+ S +PS MKRK  V INTEGSL
Sbjct: 152 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSL 185

[Close]
BLAST of Lag0031633.1 vs. ExPASy TrEMBL
Match: A0A5D3BLW3 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00640 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.4e-19
Identity = 57/94 (60.64%), Postives = 72/94 (76.60%), Query Frame = 0 

Query: 1   MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEV 60
           +SMA  EE+NQC  ST TR SAF+RLS+STSKK +PSTS F R+K+ +DQ +R+M +L+ 
Sbjct: 151 LSMATKEEKNQCPTSTCTRTSAFKRLSISTSKKDRPSTSAFDRVKMINDQQQREMKSLKA 210

Query: 61  KLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL 95
           K F+E N D K+ S +PS MKRK FV INTEGSL
Sbjct: 211 KPFHEENDDDKIHSRVPSRMKRKLFVDINTEGSL 244

[Close]
BLAST of Lag0031633.1 vs. ExPASy TrEMBL
Match: A0A5D3D209 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003310 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.4e-19
Identity = 57/94 (60.64%), Postives = 71/94 (75.53%), Query Frame = 0 

Query: 1   MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEV 60
           +SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS F RLK+T++Q KR+M + + 
Sbjct: 422 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNNQQKREMKSFKA 481

Query: 61  KLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL 95
           K F+E N D K+ S +PS MKRK  V INTEGSL
Sbjct: 482 KPFHEQNDDNKIHSRVPSRMKRKLSVDINTEGSL 515

The following BLAST results are available for this feature:
BLAST of Lag0031633.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0044978.13.8e-1961.70retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0050734.13.8e-1961.70gag protease polyprotein [Cucumis melo var. makuwa] >TYJ95698.1 gag protease pol... [more]
KAA0036008.18.6e-1960.64Retrotransposon gag protein [Cucumis melo var. makuwa][more]
TYK16519.11.1e-1860.64retrotransposon gag protein [Cucumis melo var. makuwa][more]
TYK00108.11.1e-1860.64retrotransposon gag protein [Cucumis melo var. makuwa][more]
BLAST of Lag0031633.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0031633.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BBF91.9e-1961.70Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5A7TQ061.9e-1961.70Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5A7SZJ74.1e-1960.64Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3BLW35.4e-1960.64Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5D3D2095.4e-1960.64Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
BLAST of Lag0031633.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0031633Lag0031633gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0031633.1.exon1Lag0031633.1.exon1exon
Lag0031633.1.exon2Lag0031633.1.exon2exon
Lag0031633.1.exon3Lag0031633.1.exon3exon
Lag0031633.1.exon4Lag0031633.1.exon4exon
Lag0031633.1.exon5Lag0031633.1.exon5exon
Lag0031633.1.exon6Lag0031633.1.exon6exon
Lag0031633.1.exon7Lag0031633.1.exon7exon
Lag0031633.1.exon8Lag0031633.1.exon8exon
Lag0031633.1.exon9Lag0031633.1.exon9exon
Lag0031633.1.exon10Lag0031633.1.exon10exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0031633.1cds.Lag0031633.1CDS
cds.Lag0031633.1cds.Lag0031633.1_2CDS
cds.Lag0031633.1cds.Lag0031633.1_3CDS
cds.Lag0031633.1cds.Lag0031633.1_4CDS
cds.Lag0031633.1cds.Lag0031633.1_5CDS
cds.Lag0031633.1cds.Lag0031633.1_6CDS
cds.Lag0031633.1cds.Lag0031633.1_7CDS
cds.Lag0031633.1cds.Lag0031633.1_8CDS
cds.Lag0031633.1cds.Lag0031633.1_9CDS
cds.Lag0031633.1cds.Lag0031633.1_10CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0031633.1Lag0031633.1-proteinpolypeptide