Lag0031183.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGCTGAAGCTACTGGACGCCACCGTCTCCAACTTCGACACTGTATTCGAGAAGTTCCGATCAGAACTGCCAAACAATAAAGCTAATTTCATCCTCTTCTTGGCCGACAACGACCCTTCCACCTCTCTCAGCTGGTGTCCTGGTACACAAATCCTGTTCAATTTCCTTGTTTTTCCTGCACTTTCTTTTACTTCTGTAGAAATTTTGTGGATGCTGTGATTACCCATCTCGAGAGGATAATGCAAATCGTGAACGTTACGGTATTGCTGTTTTGTCGCAGTTTTTTAAATGGAAATTTGTTATTATAATTCTGGGTTTGTCGTTGCTTCTCGATTGTGATTGCTCACGTTTTGCCTTTCTTCATGTGCGAGTTTCCTTTTTAATATTTAGAAAATAATTGAAACATGTGTTTGAATTCCTTAAGTTTTCCAAATCAATTGGAGGGGATAATGTTATATATATATATATATGTACAGATTCATACACATATACACCACTTGCTGCCCTAGAGACCAAGGCGTTGAGTATATGTCAATTTTAAGTTAGCTATCGCTTAGTCCATCAATGAAATTATAGATTCCTTTGCATGTAATGGAAGATGTTTGAAGGAATCAATTACTTGAAGAGATTATCTATTCAAATGGGTTATTGTATTTGATTTATGAGATTAGATATCATGGACCTGATATTGAGAATCAAATTTATAGATATCTCTAGTGATTATGGCTTTGTGAGTGAACTAGGAAGTTCCCTTTCAAGTTTTCTTACCTTTAGGTTTAAGAATGAAGTATCCAAAAGTCACCAGTTCCCAGTTTGATCTTTACATGTATGATGATGCAATGTCTAGATGGAAAAAGTGATAATATTTTGGTACATTGTGAGCTTGGATTTAAGAATGCTTATTTTGTACATTCGGTGTTAGCTGATGGATGCCCTCAAACGAACCTGAAGAATCTTGTTTCTGCAGCTTTTATGTGGTCATTCGCAGAAATCATTGAAACTGAGAATTCTTTTTACAGACAAGTACGATGTGTTGTGTGCCGCGACAGAAAAATTATCAATGTTGCCACTACAATTTTTTATCTCGGCATAGAACTGTCCTGTCACATTGTTCCATTGCAAACCTCTCAAAAACGGCTCCTAATTAACCCAATGTTAATGTGGACTAGGTCTGAGATAATTCTTTGTTCCACAGTTTGAGTCGAATTACAACTAGACAACTAAGAATTCTTATAGATGTACTAGTACAAGCAAGTGCATCTTTGATGCAGTCATCAATTCTTCTGAAAGATTTTAACTGTTTGGTTTGTGTGTCAGACTGTGTGAGAGCTGAACCAATCATCTACAAAAAACTGGAATCAGCATCAGACGATATCGCACTTTTGAGAGCCTATGTTGGAGATAGACCAACATGGAGGAATCCCCTGCATCCATGGAGGGTGGATTCTAGGTTCAAGCTTACTGGAGTTCCGACGCTGGTCCGATGGGAGGAGAATGATAAAATCAGTGGTCGCCTTGAAGACCATGAAGCTCATGTGGAGAAGAAAATTGATGCCCTTGTTGCCGGTAAATAA ATGCCGCTGAAGCTACTGGACGCCACCGTCTCCAACTTCGACACTGTATTCGAGAAGTTCCGATCAGAACTGCCAAACAATAAAGCTAATTTCATCCTCTTCTTGGCCGACAACGACCCTTCCACCTCTCTCAGCTGGTGTCCTGATGGAAAAAGTGATAATATTTTGGTACATTGTGAGCTTGGATTTAAGAATGCTTATTTTGTACATTCGGTGTTAGCTGATGGATGCCCTCAAACGAACCTGAAGAATCTTGTTTCTGCAGCTTTTATGTGGTCATTCGCAGAAATCATTGAAACTGAGAATTCTTTTTACAGACAATCATCAATTCTTCTGAAAGATTTTAACTGTTTGGTTTGTGTGTCAGACTGTGTGAGAGCTGAACCAATCATCTACAAAAAACTGGAATCAGCATCAGACGATATCGCACTTTTGAGAGCCTATGTTGGAGATAGACCAACATGGAGGAATCCCCTGCATCCATGGAGGGTGGATTCTAGGTTCAAGCTTACTGGAGTTCCGACGCTGGTCCGATGGGAGGAGAATGATAAAATCAGTGGTCGCCTTGAAGACCATGAAGCTCATGTGGAGAAGAAAATTGATGCCCTTGTTGCCGGTAAATAA ATGCCGCTGAAGCTACTGGACGCCACCGTCTCCAACTTCGACACTGTATTCGAGAAGTTCCGATCAGAACTGCCAAACAATAAAGCTAATTTCATCCTCTTCTTGGCCGACAACGACCCTTCCACCTCTCTCAGCTGGTGTCCTGATGGAAAAAGTGATAATATTTTGGTACATTGTGAGCTTGGATTTAAGAATGCTTATTTTGTACATTCGGTGTTAGCTGATGGATGCCCTCAAACGAACCTGAAGAATCTTGTTTCTGCAGCTTTTATGTGGTCATTCGCAGAAATCATTGAAACTGAGAATTCTTTTTACAGACAATCATCAATTCTTCTGAAAGATTTTAACTGTTTGGTTTGTGTGTCAGACTGTGTGAGAGCTGAACCAATCATCTACAAAAAACTGGAATCAGCATCAGACGATATCGCACTTTTGAGAGCCTATGTTGGAGATAGACCAACATGGAGGAATCCCCTGCATCCATGGAGGGTGGATTCTAGGTTCAAGCTTACTGGAGTTCCGACGCTGGTCCGATGGGAGGAGAATGATAAAATCAGTGGTCGCCTTGAAGACCATGAAGCTCATGTGGAGAAGAAAATTGATGCCCTTGTTGCCGGTAAATAA MPLKLLDATVSNFDTVFEKFRSELPNNKANFILFLADNDPSTSLSWCPDGKSDNILVHCELGFKNAYFVHSVLADGCPQTNLKNLVSAAFMWSFAEIIETENSFYRQSSILLKDFNCLVCVSDCVRAEPIIYKKLESASDDIALLRAYVGDRPTWRNPLHPWRVDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVEKKIDALVAGK Homology
BLAST of Lag0031183.1 vs. NCBI nr
Match: KAG6581598.1 (O-fucosyltransferase 20, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 226.1 bits (575), Expect = 2.8e-55 Identity = 120/205 (58.54%), Postives = 126/205 (61.46%), Query Frame = 0
BLAST of Lag0031183.1 vs. NCBI nr
Match: XP_011651794.1 (thioredoxin-like protein Clot isoform X2 [Cucumis sativus]) HSP 1 Score: 226.1 bits (575), Expect = 2.8e-55 Identity = 119/207 (57.49%), Postives = 126/207 (60.87%), Query Frame = 0
BLAST of Lag0031183.1 vs. NCBI nr
Match: XP_022983629.1 (thioredoxin-like protein Clot [Cucurbita maxima] >KAG7018099.1 Thioredoxin-like protein Clot [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 226.1 bits (575), Expect = 2.8e-55 Identity = 120/205 (58.54%), Postives = 126/205 (61.46%), Query Frame = 0
BLAST of Lag0031183.1 vs. NCBI nr
Match: XP_022152566.1 (thioredoxin-like protein Clot [Momordica charantia]) HSP 1 Score: 224.9 bits (572), Expect = 6.2e-55 Identity = 119/207 (57.49%), Postives = 127/207 (61.35%), Query Frame = 0
BLAST of Lag0031183.1 vs. NCBI nr
Match: XP_023526301.1 (thioredoxin-like protein Clot [Cucurbita pepo subsp. pepo]) HSP 1 Score: 224.6 bits (571), Expect = 8.1e-55 Identity = 119/205 (58.05%), Postives = 126/205 (61.46%), Query Frame = 0
BLAST of Lag0031183.1 vs. ExPASy Swiss-Prot
Match: Q9FMN4 (Thioredoxin-like protein Clot OS=Arabidopsis thaliana OX=3702 GN=At5g42850 PE=2 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.4e-33 Identity = 81/206 (39.32%), Postives = 99/206 (48.06%), Query Frame = 0
BLAST of Lag0031183.1 vs. ExPASy Swiss-Prot
Match: Q5Z9Z3 (Thioredoxin-like protein Clot OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0320000 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 4.8e-26 Identity = 71/210 (33.81%), Postives = 96/210 (45.71%), Query Frame = 0
BLAST of Lag0031183.1 vs. ExPASy Swiss-Prot
Match: Q6DBT3 (Thioredoxin domain-containing protein 17 OS=Danio rerio OX=7955 GN=txndc17 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.2e-05 Identity = 23/63 (36.51%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of Lag0031183.1 vs. ExPASy TrEMBL
Match: A0A7N2R2A0 (DUF953 domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 2.1e-56 Identity = 122/207 (58.94%), Postives = 138/207 (66.67%), Query Frame = 0
BLAST of Lag0031183.1 vs. ExPASy TrEMBL
Match: A0A6J1J7Z3 (thioredoxin-like protein Clot OS=Cucurbita maxima OX=3661 GN=LOC111482184 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 1.3e-55 Identity = 120/205 (58.54%), Postives = 126/205 (61.46%), Query Frame = 0
BLAST of Lag0031183.1 vs. ExPASy TrEMBL
Match: A0A0A0LEX6 (DUF953 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G701560 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 1.3e-55 Identity = 119/207 (57.49%), Postives = 126/207 (60.87%), Query Frame = 0
BLAST of Lag0031183.1 vs. ExPASy TrEMBL
Match: A0A6J1DI40 (thioredoxin-like protein Clot OS=Momordica charantia OX=3673 GN=LOC111020265 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 3.0e-55 Identity = 119/207 (57.49%), Postives = 127/207 (61.35%), Query Frame = 0
BLAST of Lag0031183.1 vs. ExPASy TrEMBL
Match: A0A6J1F6J0 (thioredoxin-like protein Clot OS=Cucurbita moschata OX=3662 GN=LOC111441330 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 3.9e-55 Identity = 119/205 (58.05%), Postives = 126/205 (61.46%), Query Frame = 0
BLAST of Lag0031183.1 vs. TAIR 10
Match: AT5G42850.1 (Thioredoxin superfamily protein ) HSP 1 Score: 143.7 bits (361), Expect = 1.7e-34 Identity = 81/206 (39.32%), Postives = 99/206 (48.06%), Query Frame = 0
BLAST of Lag0031183.1 vs. TAIR 10
Match: AT5G42850.2 (Thioredoxin superfamily protein ) HSP 1 Score: 143.7 bits (361), Expect = 1.7e-34 Identity = 81/206 (39.32%), Postives = 99/206 (48.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|