Lag0030882.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAGATTGCTAAGATCTCAGAGCAGGTGCAGCTGAAGTCTTCTGGTCGAAGGTTTTATGAGTTTATTAAGAACATGGACTGTCTTCCTCGAATGTTTCCTGAAAACTTTAAGGGATACGAAATTGTGGAAGGACATGGTTTCACTCATGGCAGCGTCGTCCTTTGGAAATATGACTTTGGTGAGAGAGATGCAATTTTGTTGTTTTCTATTTAGGTCTTGTTTGATAACCATTTATATTTTGGTGTTTGGTTTTTGAAAATTATAGTTGTTTTCTCCCGATTTCCTTACTATAGTTTTCATCTTTGTGAACAGAGGCATTAAAATAATCTTGAAAATTTTCCAAAAACAAAAAAAAAAGTATTTGAAACTACTAGTTTTAGTTTTTAAAATTTAACTTGGTTTTTGAAACCATGGGAAAAAGACAGATAACAAAACAAATAAACTTATTGTTTTAATCCTATAGATTTGAATATAGAATATGTTGAGGACGTCGAAAAGTTGAGTGAAGACCTCACAATTTATTCGTATGAGTAGTCCCTCTATATTTTATAATCTAGACTCACTAATACTTATTGGGTTTATCAAAAGATTAATTATATATATATATATAGAGTCACGACAGATTAATTAATTATTTGTCTTACCAATTAACCTAGACGGTTAAGATTCTCCTCTAACCTAATAACCTCTCAATTTAAGCTTTTAGATTCATTGGTAGATTTAAAACAATGTAATATCAAAGAGGTTATGAACTTCAAATTTAACATCATCTTCTTGCTCTCGTAGGTACTAATACATTTCACGTGTCACGTTTTCAAGTCAACTAGATATACGTCCTATATAATTAATCATCAACTTAAGTTTTAGAATTTCACGATCGACAAATCTTACCATTTTCTTTTTTTCTTTTTTTTTGAAAATTACAAAGGTATCCCATTAGAAGTAAAGGAGAGGCGAGCTGTGGATGATGCCAACAAATCAATAAGTATGGAGTGTCTTGAAGGAGATCTGTTCAGAGATTTTGAAGAACTCAAAGTGAATCTTCAAGTTGTTGACAATGATAGCAATGGCAGCTCAGTTAATTGGTTTGTAGAATTTGTAAAGGCAAATGAAGATGTGGCTCCACCCTATAATTATCTCCACATGGGAGTTAAAGCAAGCAAAGGCATTGATGCTTACCTTTGCAACAACTCAACTAATTAA ATGGCTCAGATTGCTAAGATCTCAGAGCAGGTGCAGCTGAAGTCTTCTGGTCGAAGGTTTTATGAGTTTATTAAGAACATGGACTGTCTTCCTCGAATGTTTCCTGAAAACTTTAAGGGATACGAAATTGTGGAAGGACATGGTTTCACTCATGGCAGCGTCGTCCTTTGGAAATATGACTTTGGTATCCCATTAGAAGTAAAGGAGAGGCGAGCTGTGGATGATGCCAACAAATCAATAAGTATGGAGTGTCTTGAAGGAGATCTGTTCAGAGATTTTGAAGAACTCAAAGTGAATCTTCAAGTTGTTGACAATGATAGCAATGGCAGCTCAGTTAATTGGTTTGTAGAATTTGTAAAGGCAAATGAAGATGTGGCTCCACCCTATAATTATCTCCACATGGGAGTTAAAGCAAGCAAAGGCATTGATGCTTACCTTTGCAACAACTCAACTAATTAA ATGGCTCAGATTGCTAAGATCTCAGAGCAGGTGCAGCTGAAGTCTTCTGGTCGAAGGTTTTATGAGTTTATTAAGAACATGGACTGTCTTCCTCGAATGTTTCCTGAAAACTTTAAGGGATACGAAATTGTGGAAGGACATGGTTTCACTCATGGCAGCGTCGTCCTTTGGAAATATGACTTTGGTATCCCATTAGAAGTAAAGGAGAGGCGAGCTGTGGATGATGCCAACAAATCAATAAGTATGGAGTGTCTTGAAGGAGATCTGTTCAGAGATTTTGAAGAACTCAAAGTGAATCTTCAAGTTGTTGACAATGATAGCAATGGCAGCTCAGTTAATTGGTTTGTAGAATTTGTAAAGGCAAATGAAGATGTGGCTCCACCCTATAATTATCTCCACATGGGAGTTAAAGCAAGCAAAGGCATTGATGCTTACCTTTGCAACAACTCAACTAATTAA MAQIAKISEQVQLKSSGRRFYEFIKNMDCLPRMFPENFKGYEIVEGHGFTHGSVVLWKYDFGIPLEVKERRAVDDANKSISMECLEGDLFRDFEELKVNLQVVDNDSNGSSVNWFVEFVKANEDVAPPYNYLHMGVKASKGIDAYLCNNSTN Homology
BLAST of Lag0030882.1 vs. NCBI nr
Match: XP_038893753.1 (kirola-like [Benincasa hispida]) HSP 1 Score: 201.8 bits (512), Expect = 4.1e-48 Identity = 102/151 (67.55%), Postives = 123/151 (81.46%), Query Frame = 0
BLAST of Lag0030882.1 vs. NCBI nr
Match: KAG6581204.1 (hypothetical protein SDJN03_21206, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017943.1 hypothetical protein SDJN02_19809, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 197.2 bits (500), Expect = 1.0e-46 Identity = 91/150 (60.67%), Postives = 119/150 (79.33%), Query Frame = 0
BLAST of Lag0030882.1 vs. NCBI nr
Match: KAG6581206.1 (Major latex protein 146, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 196.8 bits (499), Expect = 1.3e-46 Identity = 93/150 (62.00%), Postives = 120/150 (80.00%), Query Frame = 0
BLAST of Lag0030882.1 vs. NCBI nr
Match: XP_023528799.1 (kirola-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 196.4 bits (498), Expect = 1.7e-46 Identity = 92/150 (61.33%), Postives = 118/150 (78.67%), Query Frame = 0
BLAST of Lag0030882.1 vs. NCBI nr
Match: XP_022935319.1 (kirola-like [Cucurbita moschata]) HSP 1 Score: 195.7 bits (496), Expect = 3.0e-46 Identity = 90/150 (60.00%), Postives = 119/150 (79.33%), Query Frame = 0
BLAST of Lag0030882.1 vs. ExPASy Swiss-Prot
Match: P19825 (Major latex protein 15 OS=Papaver somniferum OX=3469 GN=MLP15 PE=2 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 5.7e-16 Identity = 43/146 (29.45%), Postives = 77/146 (52.74%), Query Frame = 0
BLAST of Lag0030882.1 vs. ExPASy Swiss-Prot
Match: Q41020 (Major latex protein 22 OS=Papaver somniferum OX=3469 GN=MLP22 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 9.7e-16 Identity = 45/145 (31.03%), Postives = 73/145 (50.34%), Query Frame = 0
BLAST of Lag0030882.1 vs. ExPASy Swiss-Prot
Match: Q06394 (Major latex protein 146 OS=Papaver somniferum OX=3469 GN=MLP146 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.2e-15 Identity = 44/147 (29.93%), Postives = 77/147 (52.38%), Query Frame = 0
BLAST of Lag0030882.1 vs. ExPASy Swiss-Prot
Match: Q06395 (Major latex protein 149 OS=Papaver somniferum OX=3469 GN=MLP149 PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.8e-15 Identity = 44/146 (30.14%), Postives = 76/146 (52.05%), Query Frame = 0
BLAST of Lag0030882.1 vs. ExPASy Swiss-Prot
Match: Q9SSK7 (MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 5.3e-14 Identity = 45/144 (31.25%), Postives = 75/144 (52.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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