Lag0028873.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0028873.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionProtein of unknown function (DUF1218)
Locationchr8: 32170955 .. 32172046 (-)
Sequence length603
RNA-Seq ExpressionLag0028873.1
SyntenyLag0028873.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTTTCTTTGTCCGTCGTAGCCATAATCGCCGCTCTGCATCTCATCGCCTTCGTCTTCGCCATCGGAGCCGAAATGCGCCGGAGCACGGTATCCTTTTCTCTCTAACTAACTCTTTTCTGATTTACCTGTAAATTGAGGCTTCTGAAAGCTTCTAAGTTCTTGCTTCTATGCATTTATGGACGGAAAAGGCAAAGGTAGAGCCGGATTTGTACGACGAGACTACTCACTGCGTTTACGATTCCGACGCGTCGACGGCGTACGGTCTTGTGGCGTTTGGTTTGCTGTTGATTAGCCACATGCTTCTTATGGCTGTCACGAGGTGTCTCTGCTGCGGCAAAGGATTGAAAAATGGAGGATCCACTGTCTGTGCCGTCATTCTCTTCGTCGTTTCTTGGTGATTTTCCTGTTTTCTCTGAATCCTCTCTCTTATTTCTAAATTGATTTCTGTCTCAGATTAGGAATCATCTGCCCTAGAAATTTGAACTGTTTTGAGTGAAGTAAGAGGAGATTAGGGCTTTTCTATACTGCTAATAAAATCTTAAAATCTTGGCGTTATCTTCACTGTCCTGAAATTAAAGAGAGGCTGGGAGATTGTTAAGAAAGAATCAGTTTGAAGAAATTCTTATAACTTCATCAAGTCAGGAAGAGAGGCCGCCAATTTTTTCGTTGCTGTGAAATCCAAAATCCAAAATCCAAAATCCAAAAGCTTAAGTTGATCCATTATGCTAAATTGAATCTCTTTTATATGTTCTTAACGCTAAGTTTTGCAAAAATTCAACTAGGTTTCTCTTCTTGGGAGCTGAATCTTTGTTGCTGGCTGGATCTGTGAGGAATGCCTACCACACCAAGTTCAGAGGAGCATTGCCTATCAAGAACCTGTCCTGTGCCACCCTTCGCCGCGGGGTGTTCGCGGCTGCAGCAGCCTTGACATTTCTGTCGTTGGTGTTTTCAATCCTTTACTACTTGACACACTCGAGAGCTGACACAGGAGGCTGGCAGAAGCACCAGAACGAAGGTGTTGGCATGGTGCCTCCACAGCACGAGCAGCAGCACGTTCGACGGACCGATGAATTCGAGAAGGTCTAG

mRNA sequence

ATGGCTGTTTCTTTGTCCGTCGTAGCCATAATCGCCGCTCTGCATCTCATCGCCTTCGTCTTCGCCATCGGAGCCGAAATGCGCCGGAGCACGGCAAAGGTAGAGCCGGATTTGTACGACGAGACTACTCACTGCGTTTACGATTCCGACGCGTCGACGGCGTACGGTCTTGTGGCGTTTGGTTTGCTGTTGATTAGCCACATGCTTCTTATGGCTGTCACGAGGTGTCTCTGCTGCGGCAAAGGATTGAAAAATGGAGGATCCACTGTCTGTGCCGTCATTCTCTTCGTCGTTTCTTGGTTTCTCTTCTTGGGAGCTGAATCTTTGTTGCTGGCTGGATCTGTGAGGAATGCCTACCACACCAAGTTCAGAGGAGCATTGCCTATCAAGAACCTGTCCTGTGCCACCCTTCGCCGCGGGGTGTTCGCGGCTGCAGCAGCCTTGACATTTCTGTCGTTGGTGTTTTCAATCCTTTACTACTTGACACACTCGAGAGCTGACACAGGAGGCTGGCAGAAGCACCAGAACGAAGGTGTTGGCATGGTGCCTCCACAGCACGAGCAGCAGCACGTTCGACGGACCGATGAATTCGAGAAGGTCTAG

Coding sequence (CDS)

ATGGCTGTTTCTTTGTCCGTCGTAGCCATAATCGCCGCTCTGCATCTCATCGCCTTCGTCTTCGCCATCGGAGCCGAAATGCGCCGGAGCACGGCAAAGGTAGAGCCGGATTTGTACGACGAGACTACTCACTGCGTTTACGATTCCGACGCGTCGACGGCGTACGGTCTTGTGGCGTTTGGTTTGCTGTTGATTAGCCACATGCTTCTTATGGCTGTCACGAGGTGTCTCTGCTGCGGCAAAGGATTGAAAAATGGAGGATCCACTGTCTGTGCCGTCATTCTCTTCGTCGTTTCTTGGTTTCTCTTCTTGGGAGCTGAATCTTTGTTGCTGGCTGGATCTGTGAGGAATGCCTACCACACCAAGTTCAGAGGAGCATTGCCTATCAAGAACCTGTCCTGTGCCACCCTTCGCCGCGGGGTGTTCGCGGCTGCAGCAGCCTTGACATTTCTGTCGTTGGTGTTTTCAATCCTTTACTACTTGACACACTCGAGAGCTGACACAGGAGGCTGGCAGAAGCACCAGAACGAAGGTGTTGGCATGGTGCCTCCACAGCACGAGCAGCAGCACGTTCGACGGACCGATGAATTCGAGAAGGTCTAG

Protein sequence

MAVSLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAFGLLLISHMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYHTKFRGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKHQNEGVGMVPPQHEQQHVRRTDEFEKV
Homology
BLAST of Lag0028873.1 vs. NCBI nr
Match: KAG7016734.1 (hypothetical protein SDJN02_21844 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331.6 bits (849), Expect = 4.6e-87
Identity = 172/201 (85.57%), Postives = 182/201 (90.55%), Query Frame = 0

Query: 1   MAVSLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAF 60
           MA SL+ VAIIA+LHLIAFVFAIGAEMRRSTA V+PD YDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLATVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYH 120
           GLLLISH +LM VTRCLCCGKGLK+GGSTVCA+ILF+VSW LFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKFRGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKHQNEGVG 180
           TKFRGALPIKNLSC+ LRRGVFAAAAALTFLSLVFSILYY+ HSRADTGGWQKHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWQKHQNEGVG 180

Query: 181 MVPPQH--EQQHVRRTDEFEK 200
           MVPP     +QH R T  FEK
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

BLAST of Lag0028873.1 vs. NCBI nr
Match: XP_022939105.1 (uncharacterized protein LOC111445108 [Cucurbita moschata])

HSP 1 Score: 331.6 bits (849), Expect = 4.6e-87
Identity = 172/201 (85.57%), Postives = 182/201 (90.55%), Query Frame = 0

Query: 1   MAVSLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAF 60
           MA SL+ VAIIA+LHLIAFVFAIGAEMRRSTA V+PD YDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYH 120
           GLLLISH +LM VTRCLCCGKGLK+GGSTVCA+ILF+VSW LFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKFRGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKHQNEGVG 180
           TKFRGALPIKNLSC+ LRRGVFAAAAALTFLSLVFSILYY+ HSRADTGGWQKHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWQKHQNEGVG 180

Query: 181 MVPPQH--EQQHVRRTDEFEK 200
           MVPP     +QH R T  FEK
Sbjct: 181 MVPPSFSGHEQHDRSTGRFEK 201

BLAST of Lag0028873.1 vs. NCBI nr
Match: KAG6579221.1 (hypothetical protein SDJN03_23669, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330.9 bits (847), Expect = 7.8e-87
Identity = 172/201 (85.57%), Postives = 182/201 (90.55%), Query Frame = 0

Query: 1   MAVSLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAF 60
           MA SL+ VAIIA+LHLIAFVFAIGAEMRRSTA V+PD YDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYH 120
           GLLLISH +LM VTRCLCCGKGLK+GGSTVCA+ILF+VSW LFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKFRGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKHQNEGVG 180
           TKFRGALPIKNLSC+ LRRGVFAAAAALTFLSLVFSILYY+ HSRADTGGWQKHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIVHSRADTGGWQKHQNEGVG 180

Query: 181 MVPPQH--EQQHVRRTDEFEK 200
           MVPP     +QH R T  FEK
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

BLAST of Lag0028873.1 vs. NCBI nr
Match: XP_022992987.1 (uncharacterized protein LOC111489148 [Cucurbita maxima])

HSP 1 Score: 329.7 bits (844), Expect = 1.7e-86
Identity = 171/201 (85.07%), Postives = 182/201 (90.55%), Query Frame = 0

Query: 1   MAVSLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAF 60
           MA SL+ VAIIA+LHLIAFVFAIGAEMRRSTA V+PD YDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYH 120
           GLLLISH +LM VTRCLCCGKGLK+GGSTVCA+ILF+VSW LFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKFRGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKHQNEGVG 180
           TKFRGALPIKNLSC+ LRRGVFAAAAALTFLSLVFSILYY+ HSRADTGGW+KHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWEKHQNEGVG 180

Query: 181 MVPPQH--EQQHVRRTDEFEK 200
           MVPP     +QH R T  FEK
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

BLAST of Lag0028873.1 vs. NCBI nr
Match: XP_023550275.1 (uncharacterized protein LOC111808498 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.6 bits (841), Expect = 3.9e-86
Identity = 171/201 (85.07%), Postives = 181/201 (90.05%), Query Frame = 0

Query: 1   MAVSLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAF 60
           MA SL+ VAIIA+LHLIAFVFAIGAEMRRSTA V+PD YDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYH 120
           GLLLISH +LM VTRCLCCGKGLK+GGSTVCA+ILF+VSW L LGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLLLGAESLLLAGSVRNAYH 120

Query: 121 TKFRGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKHQNEGVG 180
           TKFRGALPIKNLSC+ LRRGVFAAAAALTFLSLVFSILYY+ HSRADTGGWQKHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWQKHQNEGVG 180

Query: 181 MVPPQH--EQQHVRRTDEFEK 200
           MVPP     +QH R T  FEK
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

BLAST of Lag0028873.1 vs. ExPASy TrEMBL
Match: A0A6J1FLQ5 (uncharacterized protein LOC111445108 OS=Cucurbita moschata OX=3662 GN=LOC111445108 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.2e-87
Identity = 172/201 (85.57%), Postives = 182/201 (90.55%), Query Frame = 0

Query: 1   MAVSLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAF 60
           MA SL+ VAIIA+LHLIAFVFAIGAEMRRSTA V+PD YDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYH 120
           GLLLISH +LM VTRCLCCGKGLK+GGSTVCA+ILF+VSW LFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKFRGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKHQNEGVG 180
           TKFRGALPIKNLSC+ LRRGVFAAAAALTFLSLVFSILYY+ HSRADTGGWQKHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWQKHQNEGVG 180

Query: 181 MVPPQH--EQQHVRRTDEFEK 200
           MVPP     +QH R T  FEK
Sbjct: 181 MVPPSFSGHEQHDRSTGRFEK 201

BLAST of Lag0028873.1 vs. ExPASy TrEMBL
Match: A0A6J1JRH3 (uncharacterized protein LOC111489148 OS=Cucurbita maxima OX=3661 GN=LOC111489148 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.4e-87
Identity = 171/201 (85.07%), Postives = 182/201 (90.55%), Query Frame = 0

Query: 1   MAVSLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAF 60
           MA SL+ VAIIA+LHLIAFVFAIGAEMRRSTA V+PD YDETTHCVYDSDAST YGLVAF
Sbjct: 1   MATSLASVAIIASLHLIAFVFAIGAEMRRSTATVQPDEYDETTHCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYH 120
           GLLLISH +LM VTRCLCCGKGLK+GGSTVCA+ILF+VSW LFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTVLMVVTRCLCCGKGLKSGGSTVCAIILFIVSWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKFRGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKHQNEGVG 180
           TKFRGALPIKNLSC+ LRRGVFAAAAALTFLSLVFSILYY+ HSRADTGGW+KHQNEGVG
Sbjct: 121 TKFRGALPIKNLSCSMLRRGVFAAAAALTFLSLVFSILYYIAHSRADTGGWEKHQNEGVG 180

Query: 181 MVPPQH--EQQHVRRTDEFEK 200
           MVPP     +QH R T  FEK
Sbjct: 181 MVPPSFSGHEQHDRSTGGFEK 201

BLAST of Lag0028873.1 vs. ExPASy TrEMBL
Match: A0A6J1DHA0 (uncharacterized protein LOC111020044 OS=Momordica charantia OX=3673 GN=LOC111020044 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.2e-86
Identity = 178/204 (87.25%), Postives = 184/204 (90.20%), Query Frame = 0

Query: 1   MAVSLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAF 60
           MA SLSV+AIIA+LHLIAFV AIGAEMRRSTA V PD YDETTHCVYDSDASTAYGL AF
Sbjct: 1   MATSLSVIAIIASLHLIAFVLAIGAEMRRSTATVVPDEYDETTHCVYDSDASTAYGLSAF 60

Query: 61  GLLLISHMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYH 120
           GLLLISH LLMAVTRCLCCGKGLK+GGSTVCA++LFVVSW LFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISHTLLMAVTRCLCCGKGLKSGGSTVCAIVLFVVSWSLFLGAESLLLAGSVRNAYH 120

Query: 121 TKFRGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKHQNE-GV 180
           TKFRGALPIKNLSC TLR GVFAAAAA+TFLSLVFSILYYLTHSRADTGGWQKHQNE GV
Sbjct: 121 TKFRGALPIKNLSCTTLRCGVFAAAAAITFLSLVFSILYYLTHSRADTGGWQKHQNEGGV 180

Query: 181 GMVP---PQHEQQHVRRTDEFEKV 201
           GMV     QHE QH RRT  FEKV
Sbjct: 181 GMVASDIAQHE-QHDRRTAGFEKV 203

BLAST of Lag0028873.1 vs. ExPASy TrEMBL
Match: A0A1S3CSX8 (uncharacterized protein LOC103504596 OS=Cucumis melo OX=3656 GN=LOC103504596 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.8e-82
Identity = 163/202 (80.69%), Postives = 177/202 (87.62%), Query Frame = 0

Query: 1   MAVSLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAF 60
           MA +L V+ IIA+LHLIAFVFAIGAEMRRSTA+V PD YDETT+CVYDSDAST YGLVAF
Sbjct: 1   MATNLFVIVIIASLHLIAFVFAIGAEMRRSTAEVVPDKYDETTYCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYH 120
           GLLLIS  +LM VTRCLCCGKGLK+GGSTVCAVI F++SW LFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISQTVLMVVTRCLCCGKGLKSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKFRGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKHQNEGVG 180
           TK+R +LP+ NLSCA LRRGVFAAAAALTFLSLVFSILYY  HSRADTGGWQKHQNEG+G
Sbjct: 121 TKYRSSLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180

Query: 181 MVPPQHEQQ--HVRRTDEFEKV 201
           M P    QQ  H RR +EFEKV
Sbjct: 181 MGPSNLPQQELHERRAEEFEKV 202

BLAST of Lag0028873.1 vs. ExPASy TrEMBL
Match: A0A0A0KV04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576780 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.8e-81
Identity = 164/203 (80.79%), Postives = 176/203 (86.70%), Query Frame = 0

Query: 1   MAVSLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAF 60
           MA SL V+ IIA+LHLIAFVFAIGAEMRRSTA V PD YDETT+CVYDSDAST YGLVAF
Sbjct: 1   MATSLFVIVIIASLHLIAFVFAIGAEMRRSTAAVVPDKYDETTYCVYDSDASTVYGLVAF 60

Query: 61  GLLLISHMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYH 120
           GLLLIS  +LM VTRCLCCGKGL++GGSTVCAVI F++SW LFLGAESLLLAGSVRNAYH
Sbjct: 61  GLLLISQTVLMVVTRCLCCGKGLRSGGSTVCAVIFFIISWHLFLGAESLLLAGSVRNAYH 120

Query: 121 TKFRGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKHQNEGVG 180
           TK+R  LP+ NLSCA LRRGVFAAAAALTFLSLVFSILYY  HSRADTGGWQKHQNEG+G
Sbjct: 121 TKYRSVLPLNNLSCAMLRRGVFAAAAALTFLSLVFSILYYSMHSRADTGGWQKHQNEGIG 180

Query: 181 MVP---PQHEQQHVRRTDEFEKV 201
           M P   PQ E QH RR +EF KV
Sbjct: 181 MGPSNLPQQE-QHERRAEEFGKV 202

BLAST of Lag0028873.1 vs. TAIR 10
Match: AT1G68220.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 216.9 bits (551), Expect = 1.5e-56
Identity = 119/203 (58.62%), Postives = 145/203 (71.43%), Query Frame = 0

Query: 1   MAVSLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAF 60
           MAVS+S++ ++ ALHL+AFVFA GAE RRSTA   PD YDE T C Y ++AST YG+ AF
Sbjct: 1   MAVSVSILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAF 60

Query: 61  GLLLISHMLLMAVTRCLCCGKGLKNGGS-TVCAVILFVVSWFLFLGAESLLLAGSVRNAY 120
           GLLL+S  ++  VT+CLC GKGL  G S TV A++ FVVSW  FLGAE+ LL GS RNAY
Sbjct: 61  GLLLVSQAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAY 120

Query: 121 HTKFRGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKHQNEG- 180
           HTK  G    K LSCA L  GVFAA AA T +SL+ +ILYYL HS+ADTGGW+KHQN+G 
Sbjct: 121 HTKSEGIYKGKELSCAVLPVGVFAAGAAFTLMSLIATILYYLAHSKADTGGWEKHQNDGI 180

Query: 181 -VGMVPPQHEQQHVRRTDEFEKV 201
            +GM  P    +  ++  EF KV
Sbjct: 181 NIGMTTPSDAPK--QQNTEFNKV 201

BLAST of Lag0028873.1 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 151.4 bits (381), Expect = 7.9e-37
Identity = 83/169 (49.11%), Postives = 106/169 (62.72%), Query Frame = 0

Query: 7   VVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAFGLLLIS 66
           V+ I+  L LIA   AI AE RRS  KV PD   E  HC Y SD +T+YG  AF LL IS
Sbjct: 6   VIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLLFIS 65

Query: 67  HMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYHTKFRGA 126
            +++M  +RC CCGK LK GGS  C ++LF++ W  FL AE  LLAGS+RNAYHT +R  
Sbjct: 66  QVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTYRRM 125

Query: 127 LPIKN-LSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKH 175
             I+N  SC  +R+GVFAA A+    + + S  YY+++SRA  G    H
Sbjct: 126 WNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDGYQTPH 174

BLAST of Lag0028873.1 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 149.4 bits (376), Expect = 3.0e-36
Identity = 81/161 (50.31%), Postives = 106/161 (65.84%), Query Frame = 0

Query: 7   VVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAFGLLLIS 66
           VV I+  L LIA   AI AE RRS  KVE D   +  +CVY +D +T+YG  AF LL +S
Sbjct: 6   VVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLLFVS 65

Query: 67  HMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYHTKFRGA 126
            +L+MA +RC CCGK L  GGS  CA+ILF++ W  FL AE  LLA S+RNAYHT++R  
Sbjct: 66  QVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQYRKM 125

Query: 127 LPIKN-LSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRA 167
             +++  SC  +R+GVFAA AA T  + + S  YY+ +SRA
Sbjct: 126 WKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRA 166

BLAST of Lag0028873.1 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 147.5 bits (371), Expect = 1.1e-35
Identity = 82/160 (51.25%), Postives = 102/160 (63.75%), Query Frame = 0

Query: 7   VVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAFGLLLIS 66
           V AI+   +LIAF  A+ AE RRSTA+V  D   +  +CVYDSD +T YG+ AF   + S
Sbjct: 6   VSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFSVAS 65

Query: 67  HMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYHTKFRGA 126
            +L+M V+RC CCGK LK GGS   A+ILF+VSW  FL AE  LLAGSV NAYHTK+R  
Sbjct: 66  QILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKYRTM 125

Query: 127 LPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRA 167
                  C TLR+GVFAA A+  F + + S  YY  +  A
Sbjct: 126 FMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSA 165

BLAST of Lag0028873.1 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 71/163 (43.56%), Postives = 102/163 (62.58%), Query Frame = 0

Query: 4   SLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAFGLL 63
           S  V  ++ AL L+AF F+I AE RRS  K   D    TT CVYDSD +T YG+ AF  L
Sbjct: 7   STLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFL 66

Query: 64  LISHMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYHTKF 123
           L S  LLM+VT+C+C G+ L  G     ++I F+ SW  FL AE+ ++AG+ +NAYHTK+
Sbjct: 67  LSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTKY 126

Query: 124 RGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRA 167
              L  +  SCA+LR+G+F A A     ++V ++ YY+  +++
Sbjct: 127 ---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKS 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7016734.14.6e-8785.57hypothetical protein SDJN02_21844 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022939105.14.6e-8785.57uncharacterized protein LOC111445108 [Cucurbita moschata][more]
KAG6579221.17.8e-8785.57hypothetical protein SDJN03_23669, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022992987.11.7e-8685.07uncharacterized protein LOC111489148 [Cucurbita maxima][more]
XP_023550275.13.9e-8685.07uncharacterized protein LOC111808498 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FLQ52.2e-8785.57uncharacterized protein LOC111445108 OS=Cucurbita moschata OX=3662 GN=LOC1114451... [more]
A0A6J1JRH38.4e-8785.07uncharacterized protein LOC111489148 OS=Cucurbita maxima OX=3661 GN=LOC111489148... [more]
A0A6J1DHA04.2e-8687.25uncharacterized protein LOC111020044 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A1S3CSX84.8e-8280.69uncharacterized protein LOC103504596 OS=Cucumis melo OX=3656 GN=LOC103504596 PE=... [more]
A0A0A0KV041.8e-8180.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576780 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G68220.11.5e-5658.62Protein of unknown function (DUF1218) [more]
AT1G52910.17.9e-3749.11Protein of unknown function (DUF1218) [more]
AT3G15480.13.0e-3650.31Protein of unknown function (DUF1218) [more]
AT4G27435.11.1e-3551.25Protein of unknown function (DUF1218) [more]
AT1G13380.11.1e-3043.56Protein of unknown function (DUF1218) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009606Modifying wall lignin-1/2PFAMPF06749DUF1218coord: 59..153
e-value: 9.0E-24
score: 83.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..200
NoneNo IPR availablePANTHERPTHR31769OS07G0462200 PROTEIN-RELATEDcoord: 2..186
NoneNo IPR availablePANTHERPTHR31769:SF63AEROBIC COPROPORPHYRINOGEN-III OXIDASE (DUF1218)coord: 2..186

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0028873Lag0028873gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0028873.1.exon3Lag0028873.1.exon3exon
Lag0028873.1.exon2Lag0028873.1.exon2exon
Lag0028873.1.exon1Lag0028873.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0028873.1cds.Lag0028873.1_3CDS
cds.Lag0028873.1cds.Lag0028873.1_2CDS
cds.Lag0028873.1cds.Lag0028873.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0028873.1Lag0028873.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane