Lag0028873.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGTTTCTTTGTCCGTCGTAGCCATAATCGCCGCTCTGCATCTCATCGCCTTCGTCTTCGCCATCGGAGCCGAAATGCGCCGGAGCACGGTATCCTTTTCTCTCTAACTAACTCTTTTCTGATTTACCTGTAAATTGAGGCTTCTGAAAGCTTCTAAGTTCTTGCTTCTATGCATTTATGGACGGAAAAGGCAAAGGTAGAGCCGGATTTGTACGACGAGACTACTCACTGCGTTTACGATTCCGACGCGTCGACGGCGTACGGTCTTGTGGCGTTTGGTTTGCTGTTGATTAGCCACATGCTTCTTATGGCTGTCACGAGGTGTCTCTGCTGCGGCAAAGGATTGAAAAATGGAGGATCCACTGTCTGTGCCGTCATTCTCTTCGTCGTTTCTTGGTGATTTTCCTGTTTTCTCTGAATCCTCTCTCTTATTTCTAAATTGATTTCTGTCTCAGATTAGGAATCATCTGCCCTAGAAATTTGAACTGTTTTGAGTGAAGTAAGAGGAGATTAGGGCTTTTCTATACTGCTAATAAAATCTTAAAATCTTGGCGTTATCTTCACTGTCCTGAAATTAAAGAGAGGCTGGGAGATTGTTAAGAAAGAATCAGTTTGAAGAAATTCTTATAACTTCATCAAGTCAGGAAGAGAGGCCGCCAATTTTTTCGTTGCTGTGAAATCCAAAATCCAAAATCCAAAATCCAAAAGCTTAAGTTGATCCATTATGCTAAATTGAATCTCTTTTATATGTTCTTAACGCTAAGTTTTGCAAAAATTCAACTAGGTTTCTCTTCTTGGGAGCTGAATCTTTGTTGCTGGCTGGATCTGTGAGGAATGCCTACCACACCAAGTTCAGAGGAGCATTGCCTATCAAGAACCTGTCCTGTGCCACCCTTCGCCGCGGGGTGTTCGCGGCTGCAGCAGCCTTGACATTTCTGTCGTTGGTGTTTTCAATCCTTTACTACTTGACACACTCGAGAGCTGACACAGGAGGCTGGCAGAAGCACCAGAACGAAGGTGTTGGCATGGTGCCTCCACAGCACGAGCAGCAGCACGTTCGACGGACCGATGAATTCGAGAAGGTCTAG ATGGCTGTTTCTTTGTCCGTCGTAGCCATAATCGCCGCTCTGCATCTCATCGCCTTCGTCTTCGCCATCGGAGCCGAAATGCGCCGGAGCACGGCAAAGGTAGAGCCGGATTTGTACGACGAGACTACTCACTGCGTTTACGATTCCGACGCGTCGACGGCGTACGGTCTTGTGGCGTTTGGTTTGCTGTTGATTAGCCACATGCTTCTTATGGCTGTCACGAGGTGTCTCTGCTGCGGCAAAGGATTGAAAAATGGAGGATCCACTGTCTGTGCCGTCATTCTCTTCGTCGTTTCTTGGTTTCTCTTCTTGGGAGCTGAATCTTTGTTGCTGGCTGGATCTGTGAGGAATGCCTACCACACCAAGTTCAGAGGAGCATTGCCTATCAAGAACCTGTCCTGTGCCACCCTTCGCCGCGGGGTGTTCGCGGCTGCAGCAGCCTTGACATTTCTGTCGTTGGTGTTTTCAATCCTTTACTACTTGACACACTCGAGAGCTGACACAGGAGGCTGGCAGAAGCACCAGAACGAAGGTGTTGGCATGGTGCCTCCACAGCACGAGCAGCAGCACGTTCGACGGACCGATGAATTCGAGAAGGTCTAG ATGGCTGTTTCTTTGTCCGTCGTAGCCATAATCGCCGCTCTGCATCTCATCGCCTTCGTCTTCGCCATCGGAGCCGAAATGCGCCGGAGCACGGCAAAGGTAGAGCCGGATTTGTACGACGAGACTACTCACTGCGTTTACGATTCCGACGCGTCGACGGCGTACGGTCTTGTGGCGTTTGGTTTGCTGTTGATTAGCCACATGCTTCTTATGGCTGTCACGAGGTGTCTCTGCTGCGGCAAAGGATTGAAAAATGGAGGATCCACTGTCTGTGCCGTCATTCTCTTCGTCGTTTCTTGGTTTCTCTTCTTGGGAGCTGAATCTTTGTTGCTGGCTGGATCTGTGAGGAATGCCTACCACACCAAGTTCAGAGGAGCATTGCCTATCAAGAACCTGTCCTGTGCCACCCTTCGCCGCGGGGTGTTCGCGGCTGCAGCAGCCTTGACATTTCTGTCGTTGGTGTTTTCAATCCTTTACTACTTGACACACTCGAGAGCTGACACAGGAGGCTGGCAGAAGCACCAGAACGAAGGTGTTGGCATGGTGCCTCCACAGCACGAGCAGCAGCACGTTCGACGGACCGATGAATTCGAGAAGGTCTAG MAVSLSVVAIIAALHLIAFVFAIGAEMRRSTAKVEPDLYDETTHCVYDSDASTAYGLVAFGLLLISHMLLMAVTRCLCCGKGLKNGGSTVCAVILFVVSWFLFLGAESLLLAGSVRNAYHTKFRGALPIKNLSCATLRRGVFAAAAALTFLSLVFSILYYLTHSRADTGGWQKHQNEGVGMVPPQHEQQHVRRTDEFEKV Homology
BLAST of Lag0028873.1 vs. NCBI nr
Match: KAG7016734.1 (hypothetical protein SDJN02_21844 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 331.6 bits (849), Expect = 4.6e-87 Identity = 172/201 (85.57%), Postives = 182/201 (90.55%), Query Frame = 0
BLAST of Lag0028873.1 vs. NCBI nr
Match: XP_022939105.1 (uncharacterized protein LOC111445108 [Cucurbita moschata]) HSP 1 Score: 331.6 bits (849), Expect = 4.6e-87 Identity = 172/201 (85.57%), Postives = 182/201 (90.55%), Query Frame = 0
BLAST of Lag0028873.1 vs. NCBI nr
Match: KAG6579221.1 (hypothetical protein SDJN03_23669, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 330.9 bits (847), Expect = 7.8e-87 Identity = 172/201 (85.57%), Postives = 182/201 (90.55%), Query Frame = 0
BLAST of Lag0028873.1 vs. NCBI nr
Match: XP_022992987.1 (uncharacterized protein LOC111489148 [Cucurbita maxima]) HSP 1 Score: 329.7 bits (844), Expect = 1.7e-86 Identity = 171/201 (85.07%), Postives = 182/201 (90.55%), Query Frame = 0
BLAST of Lag0028873.1 vs. NCBI nr
Match: XP_023550275.1 (uncharacterized protein LOC111808498 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 328.6 bits (841), Expect = 3.9e-86 Identity = 171/201 (85.07%), Postives = 181/201 (90.05%), Query Frame = 0
BLAST of Lag0028873.1 vs. ExPASy TrEMBL
Match: A0A6J1FLQ5 (uncharacterized protein LOC111445108 OS=Cucurbita moschata OX=3662 GN=LOC111445108 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.2e-87 Identity = 172/201 (85.57%), Postives = 182/201 (90.55%), Query Frame = 0
BLAST of Lag0028873.1 vs. ExPASy TrEMBL
Match: A0A6J1JRH3 (uncharacterized protein LOC111489148 OS=Cucurbita maxima OX=3661 GN=LOC111489148 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 8.4e-87 Identity = 171/201 (85.07%), Postives = 182/201 (90.55%), Query Frame = 0
BLAST of Lag0028873.1 vs. ExPASy TrEMBL
Match: A0A6J1DHA0 (uncharacterized protein LOC111020044 OS=Momordica charantia OX=3673 GN=LOC111020044 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 4.2e-86 Identity = 178/204 (87.25%), Postives = 184/204 (90.20%), Query Frame = 0
BLAST of Lag0028873.1 vs. ExPASy TrEMBL
Match: A0A1S3CSX8 (uncharacterized protein LOC103504596 OS=Cucumis melo OX=3656 GN=LOC103504596 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 4.8e-82 Identity = 163/202 (80.69%), Postives = 177/202 (87.62%), Query Frame = 0
BLAST of Lag0028873.1 vs. ExPASy TrEMBL
Match: A0A0A0KV04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576780 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 1.8e-81 Identity = 164/203 (80.79%), Postives = 176/203 (86.70%), Query Frame = 0
BLAST of Lag0028873.1 vs. TAIR 10
Match: AT1G68220.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 216.9 bits (551), Expect = 1.5e-56 Identity = 119/203 (58.62%), Postives = 145/203 (71.43%), Query Frame = 0
BLAST of Lag0028873.1 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 151.4 bits (381), Expect = 7.9e-37 Identity = 83/169 (49.11%), Postives = 106/169 (62.72%), Query Frame = 0
BLAST of Lag0028873.1 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 149.4 bits (376), Expect = 3.0e-36 Identity = 81/161 (50.31%), Postives = 106/161 (65.84%), Query Frame = 0
BLAST of Lag0028873.1 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 147.5 bits (371), Expect = 1.1e-35 Identity = 82/160 (51.25%), Postives = 102/160 (63.75%), Query Frame = 0
BLAST of Lag0028873.1 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30 Identity = 71/163 (43.56%), Postives = 102/163 (62.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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