Lag0027131.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACATTCCTTCCTTTCATCAGAAGTTGGCTCTCCAAGATGTAGACGGTTTGGATGATCTGCAGTCGTCTTTGAGAGAAATTGATGCTGCATTGTTTAATGATCTTGACAGATCTTTTCAGCAGTCTTTGAGCTTTGAAGATACTAAAAGTTCAGAGTGCAAACGTAACCTGAATTGCGATGATAATTCAAATGATAGAAACAAACAAAAAGAGCTTGAACCTCCCGAGAAGAACTCATCTAAGAAGTGTTTAAGCAAATCCAAGTCCTTTCCTCTTCCTGCTGCAACATTCACCCCTAACGATTCTTCAGAAAATGATAAGAAACCACAAACAGCGACGGGTGATGCGTCCTCTAATGAATCTGTGCATCATGCCTTTGCAAGATCAATATCTTTACCAGTAAGTTTTCTTATCGGCAAGACTAAACATGGATAATTTTGCAGTTGCGTCAGTATATGATTTCTTGTATTCAGTTTTGTAGCTTTGCTATTATTATTGCTCTGTCGATTACTCCTTATTGTTATTATAAACTATGAATATCATAATTATCATGGTTTTCTGTTATCGATTATACATGACTACGTTTTCCTATTTTATCAAACCATCTGAGCATAACCCTCCAAGTAGGGGGTGGGGAAAAAGTTAAATTGTTCCAAGCAACATGATCCTACGATGGGATTTTTTTTAATGTTTTTTCTTTGTAGTATGTCATATCTTTGTTTTTTTTGGAGGCAAACCTGCTGCGGTGTGTATGTACGTGGTTAATTTGTTTCGTGAGTTTTTCATTTTCATTTCATGAAATAGAGAATTTTCTGTCAATGTTGATTGCTGTTAGTAGCATGGCCCAAAGATGATTGTCTATTTTCGCTACAATTTTTATTTACCCCACCCAGAGGGCAGATTTGAGTTTGTTACTGTCAAAGCGGCTCATAATACGAGCTTGCTTGTGGTTTTATATTCAGTTATAGATAATGACTTGTTATGAAATAAACACCCAAAGTTTTGTTGCCCATGTAACTTGAATACTAGTGAGTGTTAGTGAATTTTGGCCTCACCCCTTCTGTTTTCAATCATGACCCTTAACTTCTATTTGCTGGCACAACTCCTAATGTTCAGGATCCTGCAAAGCTCGTATCTGCAATGAAAGGTAGCCGAGCACAACACTATGGGGAGTCTCCTAGGCTGACTGTGAAATGGGCTCCCGACGTGTACGATCCACCCCAGACATCTTTGTCCCATAGTGTCAAAAACAACAAGAAACAGCAGAAATCTAAGAACAGGAAGAATGGGAAGAAAGGACAGAAGGGCAGCAACTCTTCGCGCGGGAGTGGTGGCAGGGACAAAAGGCAGGCTCGTAAAGCCGTTGGCAGTTCTGATCGGTATCAAAGATCATTTGACTCTCATGAAAGTTTGGTTAATACTCTCAATGAGTTTGAGAGTTTCGATGACGGGAGCTCAGACTCTCACTGTGGAAGCATCTTTCTGAAAACATCAGTCACCAAGGTGCACTACTCTGTTACTGAAGCCTTGTGA ATGGACATTCCTTCCTTTCATCAGAAGTTGGCTCTCCAAGATGTAGACGGTTTGGATGATCTGCAGTCGTCTTTGAGAGAAATTGATGCTGCATTGTTTAATGATCTTGACAGATCTTTTCAGCAGTCTTTGAGCTTTGAAGATACTAAAAGTTCAGAGTGCAAACGTAACCTGAATTGCGATGATAATTCAAATGATAGAAACAAACAAAAAGAGCTTGAACCTCCCGAGAAGAACTCATCTAAGAAGTGTTTAAGCAAATCCAAGTCCTTTCCTCTTCCTGCTGCAACATTCACCCCTAACGATTCTTCAGAAAATGATAAGAAACCACAAACAGCGACGGGTGATGCGTCCTCTAATGAATCTGTGCATCATGCCTTTGCAAGATCAATATCTTTACCAGATCCTGCAAAGCTCGTATCTGCAATGAAAGGTAGCCGAGCACAACACTATGGGGAGTCTCCTAGGCTGACTGTGAAATGGGCTCCCGACGTGTACGATCCACCCCAGACATCTTTGTCCCATAGTGTCAAAAACAACAAGAAACAGCAGAAATCTAAGAACAGGAAGAATGGGAAGAAAGGACAGAAGGGCAGCAACTCTTCGCGCGGGAGTGGTGGCAGGGACAAAAGGCAGGCTCGTAAAGCCGTTGGCAGTTCTGATCGGTATCAAAGATCATTTGACTCTCATGAAAGTTTGGTTAATACTCTCAATGAGTTTGAGAGTTTCGATGACGGGAGCTCAGACTCTCACTGTGGAAGCATCTTTCTGAAAACATCAGTCACCAAGGTGCACTACTCTGTTACTGAAGCCTTGTGA ATGGACATTCCTTCCTTTCATCAGAAGTTGGCTCTCCAAGATGTAGACGGTTTGGATGATCTGCAGTCGTCTTTGAGAGAAATTGATGCTGCATTGTTTAATGATCTTGACAGATCTTTTCAGCAGTCTTTGAGCTTTGAAGATACTAAAAGTTCAGAGTGCAAACGTAACCTGAATTGCGATGATAATTCAAATGATAGAAACAAACAAAAAGAGCTTGAACCTCCCGAGAAGAACTCATCTAAGAAGTGTTTAAGCAAATCCAAGTCCTTTCCTCTTCCTGCTGCAACATTCACCCCTAACGATTCTTCAGAAAATGATAAGAAACCACAAACAGCGACGGGTGATGCGTCCTCTAATGAATCTGTGCATCATGCCTTTGCAAGATCAATATCTTTACCAGATCCTGCAAAGCTCGTATCTGCAATGAAAGGTAGCCGAGCACAACACTATGGGGAGTCTCCTAGGCTGACTGTGAAATGGGCTCCCGACGTGTACGATCCACCCCAGACATCTTTGTCCCATAGTGTCAAAAACAACAAGAAACAGCAGAAATCTAAGAACAGGAAGAATGGGAAGAAAGGACAGAAGGGCAGCAACTCTTCGCGCGGGAGTGGTGGCAGGGACAAAAGGCAGGCTCGTAAAGCCGTTGGCAGTTCTGATCGGTATCAAAGATCATTTGACTCTCATGAAAGTTTGGTTAATACTCTCAATGAGTTTGAGAGTTTCGATGACGGGAGCTCAGACTCTCACTGTGGAAGCATCTTTCTGAAAACATCAGTCACCAAGGTGCACTACTCTGTTACTGAAGCCTTGTGA MDIPSFHQKLALQDVDGLDDLQSSLREIDAALFNDLDRSFQQSLSFEDTKSSECKRNLNCDDNSNDRNKQKELEPPEKNSSKKCLSKSKSFPLPAATFTPNDSSENDKKPQTATGDASSNESVHHAFARSISLPDPAKLVSAMKGSRAQHYGESPRLTVKWAPDVYDPPQTSLSHSVKNNKKQQKSKNRKNGKKGQKGSNSSRGSGGRDKRQARKAVGSSDRYQRSFDSHESLVNTLNEFESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL Homology
BLAST of Lag0027131.1 vs. NCBI nr
Match: XP_008442574.1 (PREDICTED: uncharacterized protein LOC103486407 [Cucumis melo]) HSP 1 Score: 418.7 bits (1075), Expect = 3.9e-113 Identity = 231/273 (84.62%), Postives = 246/273 (90.11%), Query Frame = 0
BLAST of Lag0027131.1 vs. NCBI nr
Match: XP_022145571.1 (uncharacterized protein LOC111014992 [Momordica charantia]) HSP 1 Score: 408.3 bits (1048), Expect = 5.2e-110 Identity = 219/272 (80.51%), Postives = 240/272 (88.24%), Query Frame = 0
BLAST of Lag0027131.1 vs. NCBI nr
Match: XP_022982544.1 (uncharacterized protein LOC111481389 [Cucurbita maxima]) HSP 1 Score: 408.3 bits (1048), Expect = 5.2e-110 Identity = 221/275 (80.36%), Postives = 243/275 (88.36%), Query Frame = 0
BLAST of Lag0027131.1 vs. NCBI nr
Match: XP_038903853.1 (uncharacterized protein LOC120090339 [Benincasa hispida]) HSP 1 Score: 403.3 bits (1035), Expect = 1.7e-108 Identity = 222/273 (81.32%), Postives = 242/273 (88.64%), Query Frame = 0
BLAST of Lag0027131.1 vs. NCBI nr
Match: KAA0044073.1 (BRI1-KD interacting protein [Cucumis melo var. makuwa] >TYK25064.1 BRI1-KD interacting protein [Cucumis melo var. makuwa]) HSP 1 Score: 401.4 bits (1030), Expect = 6.4e-108 Identity = 220/258 (85.27%), Postives = 234/258 (90.70%), Query Frame = 0
BLAST of Lag0027131.1 vs. ExPASy TrEMBL
Match: A0A1S3B607 (uncharacterized protein LOC103486407 OS=Cucumis melo OX=3656 GN=LOC103486407 PE=4 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 1.9e-113 Identity = 231/273 (84.62%), Postives = 246/273 (90.11%), Query Frame = 0
BLAST of Lag0027131.1 vs. ExPASy TrEMBL
Match: A0A6J1J4W0 (uncharacterized protein LOC111481389 OS=Cucurbita maxima OX=3661 GN=LOC111481389 PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 2.5e-110 Identity = 221/275 (80.36%), Postives = 243/275 (88.36%), Query Frame = 0
BLAST of Lag0027131.1 vs. ExPASy TrEMBL
Match: A0A6J1CWP6 (uncharacterized protein LOC111014992 OS=Momordica charantia OX=3673 GN=LOC111014992 PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 2.5e-110 Identity = 219/272 (80.51%), Postives = 240/272 (88.24%), Query Frame = 0
BLAST of Lag0027131.1 vs. ExPASy TrEMBL
Match: A0A5D3DN94 (BRI1-KD interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001860 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.1e-108 Identity = 220/258 (85.27%), Postives = 234/258 (90.70%), Query Frame = 0
BLAST of Lag0027131.1 vs. ExPASy TrEMBL
Match: A0A6J1F8B3 (uncharacterized protein LOC111441794 OS=Cucurbita moschata OX=3662 GN=LOC111441794 PE=4 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 5.3e-108 Identity = 220/275 (80.00%), Postives = 243/275 (88.36%), Query Frame = 0
BLAST of Lag0027131.1 vs. TAIR 10
Match: AT3G53670.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37480.1); Has 176 Blast hits to 173 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 13; Plants - 154; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 58.5 bits (140), Expect = 9.4e-09 Identity = 48/142 (33.80%), Postives = 80/142 (56.34%), Query Frame = 0
BLAST of Lag0027131.1 vs. TAIR 10
Match: AT3G53670.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37480.1). ) HSP 1 Score: 58.5 bits (140), Expect = 9.4e-09 Identity = 48/142 (33.80%), Postives = 80/142 (56.34%), Query Frame = 0
BLAST of Lag0027131.1 vs. TAIR 10
Match: AT2G37480.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 55.8 bits (133), Expect = 6.1e-08 Identity = 49/141 (34.75%), Postives = 74/141 (52.48%), Query Frame = 0
BLAST of Lag0027131.1 vs. TAIR 10
Match: AT2G37480.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 186 Blast hits to 186 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 14; Fungi - 7; Plants - 154; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 8.0e-08 Identity = 49/142 (34.51%), Postives = 74/142 (52.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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