Lag0024609.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0024609.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Protein of unknown function (DUF3537)
Location	chr10: 4332472 .. 4335956 (+)
Sequence length	606
RNA-Seq Expression	Lag0024609.1
Synteny	Lag0024609.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGAAAATCTCCCGCTCCCCTGTTCCGAGGCTATGGAAAACGAGGAGAAGAAATCTCCCTCTCAAATCGATCTGTACCAACCACTCGATTCGCGAAAAGCAGAATCTGAATCTGAAGCGGCCGAATTGAAGAGGTTCGAATCATTCCTGAAATGGATTTGCATAATCGATCAATCCAATCCATTCAGCGCTTCGCTCTCCTGCTTCGTCTTCTTCGTCTTCGCATTCGCCGTCCCTATCGCATCGCACTTCGCTCTCTCTTGCTCCGATTGCGACGAAGATCACCAGAGGCCTTTTCATGTCGTCGTTCAGGTTTCTCTCTCCGCTGTTGCCACGCTTTCATTCGCTTGCCTCTCTATTTGGCTCCGTCTCTTCGGATTAAACCGATTTCTGTTCCTCGATAAGCTCTGTGAAGCAAGTCCGAAGGTTCGGGATGAGTATTCCAAGCAATTGAAGGTACGTTTCCTTTCTTTTTTCACCCGATTTCCAAATCCCCCTTTCCTCAAGATGAAGATGAACACGAATCCTTTTTTAGACTTCCGTTAATGGTCCAATAGCTATCCGATCATTTTTAAAAATAAGAAACTTTAAATTTTGTGTTTAAAAAGTGTTTACTCATCAGAAATGTTAAAAAAAAATCACACCAATCAAATCAGTTTGTTACAATTTCATCAATCAACACTTACAATGTTTTCTTTATGGGGTTGTTGAAATTCAAGAGCAAAAATGAAAAGTTGGGGTTTTTTTTTCTATCACTGATAGAATCTATCAGTGATAGAAAAGTTTCTATCAGTGATAGAATTAACTTTCTATTACTGATAGAAAATTTTTCTATCACTGATAGAATCTATCAGTGATAGAAACGTTTCTATCAGTGATAGAAAAGTTTTCTATCACTGATAGAAAAATTTTCTATCAGTGATAGAAGATTTCTATCACTGATAGAAAATTTTTCTATCACTGATAGAATCTATCAGTGATAGAAACGTTTCTATCAGTGATAGAAAAATTTCTATCACTGATAGAAGATTTCTATCACTGATAGAAAATTTTTCTATCACTGATAGAATCTATCAGTGATAGAAACGTTTCTATCACTTATAGAAAGTTAATTCTATCAGTGTTTTTTTCTATCACTGATAGATTCTATCAATGATAGAAAAGCGTTCTATCAGTGATAGAAAGTTTTCTATCACTCATAGAAATAATTCTATCAGTGATAGAAGTTTCTATCACTGATTTCTATCACTGATAGATTCTATCAGTGATAGAAAAACTTCTATCACTGATAGAAAGTTATCACTGATAGAATCTATCAGTGATAGAAACGTTTCTATCAGTGATAGAAAAGTTTTCTATCACTGATAGAAAAATTTTCTATCAGTGATAGAAACGTTTCTATCAATGATAGAAACGTTTCTATCAGTGATAGATTCTATCAGTGATAGAAAAATTACTGATAGAAAATTTTTCTATCACTGATAGAATCTATCAGTGATAGAAACGTTTCTATCAGTGATAGAAACGTTTCTATCACTGATAGAAAGTTAATTCTATCAGTGTTTTTTCTATCACTGATAGATTCTATCAATGATAGAAAAGCGTTCTATCAGTGATAGAAAATTTCTATCACTGATAGAAAGTTTTCTATCACTGATAGAAATAATTCTATAAGTGATAGAAGTTTCTATCACTGATAGATTCTATCAGTGATAGAAAAACTTCTATCACTGATAGATTCTATCAGTGATAGAAAAACTTCTATCAGTGATAGAAGTTTTCTATCATTATAGAAAGTTTTTCTATCACTGATAGAATCTATCAGTGATAGAAGTTTTTCTATCACTGATAGAAAGTTTTTCTATCACTGATAGAATCTATCAGTGATAGAAAATTTTCTATCAGATAGAAAGTTCTCAACTTCTATCTGATAGAAGAACTTTCTATTTGATAGAAAGTTTTTCTATCACTGATAGAATCTATCAGTGATAGAAAAATTTTCTATCAGATAGAAAGTTCTCAACTTTCTATACTTTCTATCTGATAGAAAACTCTATCACCGATAGAATCTATCAGTGATAGAAAAATTTTCTATCAGATAGAAAGTTTTTCTATCACCGATAGAATCTATCAGTGATAGAAAAATTTTCTATCAGATAGAAAATTTTCTATCACTGATAGATTCTATCGGTGATAGAGTTTTCTATCAGATAGAAAGTTTTTCTATCACTGATAGAATCTATCAGTGATAGAAAAACTTTCTTTCAATCAGATAGAAAGTTGAGATAGAAAGAACTTTCTATCTGATAGAAAGAACTTTCTATCTGATAGAAAATTTTTCTATCACTGATAGAATCTATCAGTGATAGAAAAACTTTCTATCAGATAGAAACCTACCAAAACAAAAATTGAGGAGACTAGATGCGCGCGCAAGGGCAAAATAGGGATATAAAAAATTAATTCAAAAATTTTGCCATATTTGCAAATATTTTAAAAAATTGCTAAAATTGCAATTATTTACCCTAATTTTGCCACCCATTACAATTATCCTAAACAAAACCCATTTTTCTTCTTTCTTAAACAAATCCACCTCAAACCCATTTTTCTTCTTTCTCAAATCAGCCCCCAAGTTCCATGTTTTCATCTTGGGAAATTGTCATTTTTAACCCCTTTAAGTTTTTGGCTTTCAAAAATAACCTCCTTTTGAAAAACTTGTTTTTTTAACCTAGCTAATAAAACCCATCAAGATGAATTTACAGAATTGCCTTTGAATCTAAAAGGTAAAAAAAAAAACAACCCACCCAAAACAAAAGAAACACATTCGTTATACTTAAACCATTCGCCTTCTTCTTCGTTGCAAGTTTTTGTGTTCTTCTTCTTCGATAAACCCGTTCGCCTTCTTCTCCGTCGTCTTCTTCGTAAGGTTCTGTTCATGTTTAATACTTGGAAAAGTTTCTTCATCGTTAAGGTACTTTTTTTTTTGGGATGAATGGGTTTTATGAATGGGTTTTTGGGGATGAATGAGTTTTAAGTCCGACGAATGTATCTATGGGTTTTATGGAGTTTGTGGGTTTCATTAAAATTTTGGAGATGAATGAGGTTTGTTGAAGTAATTTTTCAAAGAGGGAGAGGGTATGCTGTGAAAAGGGAGGTTTGTTTGTATTTTTTTTTCAGAATGTCAGAGTACAAGGAACCATCGGCGCCGGAGAAGGCGAGTTTTCCGGGTCACTTCTCAGTCGGGATCGAAACCCGGAAAAAACTGGTTCCCCAAGTGGAAACTGGTTCTTCCCTTACGGAAAGTCAATTTTTTTTCGAGTCGACTTCCAAGTGACCCGGAAAAAAAAAAAAAACAGTATGGTTTTTTTTTAATTTTAATTTTAATTTTTCCCCTCCTTCATTTCATTATCTATTTTTTCATTGTTTGTGTTTTTGTTTGTTGTAGGTGTACATTGCTTCGAGCCTCCTCTCTCGTAATTTCTTGA

mRNA sequence

ATGTATGAAAATCTCCCGCTCCCCTGTTCCGAGGCTATGGAAAACGAGGAGAAGAAATCTCCCTCTCAAATCGATCTGTACCAACCACTCGATTCGCGAAAAGCAGAATCTGAATCTGAAGCGGCCGAATTGAAGAGGTTCGAATCATTCCTGAAATGGATTTGCATAATCGATCAATCCAATCCATTCAGCGCTTCGCTCTCCTGCTTCGTCTTCTTCGTCTTCGCATTCGCCGTCCCTATCGCATCGCACTTCGCTCTCTCTTGCTCCGATTGCGACGAAGATCACCAGAGGCCTTTTCATGTCGTCGTTCAGGTTTCTCTCTCCGCTGTTGCCACGCTTTCATTCGCTTGCCTCTCTATTTGGCTCCGTCTCTTCGGATTAAACCGATTTCTGTTCCTCGATAAGCTCTGTGAAGCAAGTCCGAAGGTTCGGGATGAGTATTCCAAGCAATTGAAGAATGTCAGAGTACAAGGAACCATCGGCGCCGGAGAAGGCGAGTTTTCCGGGTCACTTCTCAGTCGGGATCGAAACCCGGAAAAAACTGGTTCCCCAAGTGGAAACTGGTGTACATTGCTTCGAGCCTCCTCTCTCGTAATTTCTTGA

Coding sequence (CDS)

ATGTATGAAAATCTCCCGCTCCCCTGTTCCGAGGCTATGGAAAACGAGGAGAAGAAATCTCCCTCTCAAATCGATCTGTACCAACCACTCGATTCGCGAAAAGCAGAATCTGAATCTGAAGCGGCCGAATTGAAGAGGTTCGAATCATTCCTGAAATGGATTTGCATAATCGATCAATCCAATCCATTCAGCGCTTCGCTCTCCTGCTTCGTCTTCTTCGTCTTCGCATTCGCCGTCCCTATCGCATCGCACTTCGCTCTCTCTTGCTCCGATTGCGACGAAGATCACCAGAGGCCTTTTCATGTCGTCGTTCAGGTTTCTCTCTCCGCTGTTGCCACGCTTTCATTCGCTTGCCTCTCTATTTGGCTCCGTCTCTTCGGATTAAACCGATTTCTGTTCCTCGATAAGCTCTGTGAAGCAAGTCCGAAGGTTCGGGATGAGTATTCCAAGCAATTGAAGAATGTCAGAGTACAAGGAACCATCGGCGCCGGAGAAGGCGAGTTTTCCGGGTCACTTCTCAGTCGGGATCGAAACCCGGAAAAAACTGGTTCCCCAAGTGGAAACTGGTGTACATTGCTTCGAGCCTCCTCTCTCGTAATTTCTTGA

Protein sequence

MYENLPLPCSEAMENEEKKSPSQIDLYQPLDSRKAESESEAAELKRFESFLKWICIIDQSNPFSASLSCFVFFVFAFAVPIASHFALSCSDCDEDHQRPFHVVVQVSLSAVATLSFACLSIWLRLFGLNRFLFLDKLCEASPKVRDEYSKQLKNVRVQGTIGAGEGEFSGSLLSRDRNPEKTGSPSGNWCTLLRASSLVIS

Homology

[Close]

BLAST of Lag0024609.1 vs. NCBI nr
Match: XP_038893800.1 (uncharacterized protein LOC120082620 [Benincasa hispida])

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-51
Identity = 108/145 (74.48%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 13  MENEEKKSPSQIDLYQPLDSRKAESESEAAELKRFESFLKWICIIDQSNPFSASLSCFVF 72
           ME EEKKS  QID  +     ++E ESEAAEL+RF+S LKWICI D SNP+ ASLSC VF
Sbjct: 1   METEEKKSQPQIDSQKLESEPESEPESEAAELRRFKSILKWICITDHSNPYRASLSCIVF 60

Query: 73  FVFAFAVPIASHFALSCSDCDEDHQRPFHVVVQVSLSAVATLSFACLSIWLRLFGLNRFL 132
           FVFA AVP+ASHFALSCSDCDEDHQRPFHVVVQ+SLSAVATLSF CLS+WLR FGLNRFL
Sbjct: 61  FVFAIAVPVASHFALSCSDCDEDHQRPFHVVVQLSLSAVATLSFLCLSLWLRFFGLNRFL 120

Query: 133 FLDKLCEASPKVRDEYSKQLKNVRV 158
           FLDKL EASP+VR EY +QL+   V
Sbjct: 121 FLDKLSEASPRVRAEYFRQLQRSMV 145

[Close]

BLAST of Lag0024609.1 vs. NCBI nr
Match: XP_022994504.1 (uncharacterized protein LOC111490209 [Cucurbita maxima])

HSP 1 Score: 209.5 bits (532), Expect = 2.6e-50
Identity = 110/155 (70.97%), Postives = 125/155 (80.65%), Query Frame = 0


Query: 13  MENEEKKSPSQIDLYQP------LDSRK--------AESESEAAELKRFESFLKWICIID 72
           ME+ EKKSPS      P      ++SRK        +ESES++AEL+RFESFLKWICI+D
Sbjct: 1   MEDPEKKSPSPSSSPSPSPSPSQINSRKSELKSESESESESDSAELRRFESFLKWICIMD 60

Query: 73  QSNPFSASLSCFVFFVFAFAVPIASHFALSCSDCDEDHQRPFHVVVQVSLSAVATLSFAC 132
            SNPF+A+LSCF+F  FA AVPIASHFALSCSDCDEDH+RPFHVVVQ+SLSAVATLSF C
Sbjct: 61  HSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSFGC 120

Query: 133 LSIWLRLFGLNRFLFLDKLCEASPKVRDEYSKQLK 154
           LS WLR FGL+RFLFLDKLCE+S K RDEYSKQLK
Sbjct: 121 LSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLK 155

[Close]

BLAST of Lag0024609.1 vs. NCBI nr
Match: XP_022954540.1 (uncharacterized protein LOC111456780 [Cucurbita moschata])

HSP 1 Score: 208.4 bits (529), Expect = 5.8e-50
Identity = 109/151 (72.19%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 13  MENEEKKSPSQIDLYQP--LDSRK--------AESESEAAELKRFESFLKWICIIDQSNP 72
           ME+ EKKSPS      P  ++SRK        +ESES++AEL+RFESFLKWICI+D SNP
Sbjct: 1   MEDPEKKSPSPSPSPSPSQINSRKSELKLESESESESDSAELRRFESFLKWICIMDHSNP 60

Query: 73  FSASLSCFVFFVFAFAVPIASHFALSCSDCDEDHQRPFHVVVQVSLSAVATLSFACLSIW 132
           F+A+LSCF+F  FA AVPIASHFALSCSDCDEDH+RPFHVVVQ+SLSAVATLSF CLS W
Sbjct: 61  FTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSFGCLSTW 120

Query: 133 LRLFGLNRFLFLDKLCEASPKVRDEYSKQLK 154
           LR  GL+RFLFLDKLCE+S K RDEYSKQLK
Sbjct: 121 LRHLGLSRFLFLDKLCESSHKARDEYSKQLK 151

[Close]

BLAST of Lag0024609.1 vs. NCBI nr
Match: KAG6583771.1 (hypothetical protein SDJN03_19703, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207.6 bits (527), Expect = 1.0e-49
Identity = 104/141 (73.76%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 13  MENEEKKSPSQIDLYQPLDSRKAESESEAAELKRFESFLKWICIIDQSNPFSASLSCFVF 72
           M+N  KKSPS      P+DS+++ESE EA EL+R ESFLKWICI DQSNP+ ASLSC +F
Sbjct: 1   MKNRGKKSPS------PMDSQESESELEAPELRRLESFLKWICINDQSNPYRASLSCLIF 60

Query: 73  FVFAFAVPIASHFALSCSDCDEDHQRPFHVVVQVSLSAVATLSFACLSIWLRLFGLNRFL 132
           F+FA AVP+ASHFALSCSDCDEDHQRPFHVVVQ+SLSAVA LSF  LS+WLRLFG NRFL
Sbjct: 61  FIFAIAVPLASHFALSCSDCDEDHQRPFHVVVQLSLSAVAMLSFLSLSLWLRLFGFNRFL 120

Query: 133 FLDKLCEASPKVRDEYSKQLK 154
           FLDKL +ASP+VR EYS+QL+
Sbjct: 121 FLDKLSKASPRVRAEYSRQLQ 135

[Close]

BLAST of Lag0024609.1 vs. NCBI nr
Match: KAG7032428.1 (hypothetical protein SDJN02_06473 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 207.6 bits (527), Expect = 1.0e-49
Identity = 104/141 (73.76%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 13  MENEEKKSPSQIDLYQPLDSRKAESESEAAELKRFESFLKWICIIDQSNPFSASLSCFVF 72
           M+N  KKSPS      P+DS+++ESE EA EL+R ESFLKWICI DQSNP+ ASLSC +F
Sbjct: 1   MKNRGKKSPS------PMDSQESESELEAPELRRLESFLKWICINDQSNPYRASLSCLIF 60

Query: 73  FVFAFAVPIASHFALSCSDCDEDHQRPFHVVVQVSLSAVATLSFACLSIWLRLFGLNRFL 132
           F+FA AVP+ASHFALSCSDCDEDHQRPFHVVVQ+SLSAVA LSF  LS+WLRLFG NRFL
Sbjct: 61  FIFAIAVPLASHFALSCSDCDEDHQRPFHVVVQLSLSAVAMLSFLSLSLWLRLFGFNRFL 120

Query: 133 FLDKLCEASPKVRDEYSKQLK 154
           FLDKL +ASP+VR EYS+QL+
Sbjct: 121 FLDKLSKASPRVRAEYSRQLQ 135

[Close]

BLAST of Lag0024609.1 vs. ExPASy TrEMBL
Match: A0A6J1K314 (uncharacterized protein LOC111490209 OS=Cucurbita maxima OX=3661 GN=LOC111490209 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.3e-50
Identity = 110/155 (70.97%), Postives = 125/155 (80.65%), Query Frame = 0


Query: 13  MENEEKKSPSQIDLYQP------LDSRK--------AESESEAAELKRFESFLKWICIID 72
           ME+ EKKSPS      P      ++SRK        +ESES++AEL+RFESFLKWICI+D
Sbjct: 1   MEDPEKKSPSPSSSPSPSPSPSQINSRKSELKSESESESESDSAELRRFESFLKWICIMD 60

Query: 73  QSNPFSASLSCFVFFVFAFAVPIASHFALSCSDCDEDHQRPFHVVVQVSLSAVATLSFAC 132
            SNPF+A+LSCF+F  FA AVPIASHFALSCSDCDEDH+RPFHVVVQ+SLSAVATLSF C
Sbjct: 61  HSNPFTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSFGC 120

Query: 133 LSIWLRLFGLNRFLFLDKLCEASPKVRDEYSKQLK 154
           LS WLR FGL+RFLFLDKLCE+S K RDEYSKQLK
Sbjct: 121 LSAWLRHFGLSRFLFLDKLCESSHKARDEYSKQLK 155

[Close]

BLAST of Lag0024609.1 vs. ExPASy TrEMBL
Match: A0A6J1GSP8 (uncharacterized protein LOC111456780 OS=Cucurbita moschata OX=3662 GN=LOC111456780 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.8e-50
Identity = 109/151 (72.19%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 13  MENEEKKSPSQIDLYQP--LDSRK--------AESESEAAELKRFESFLKWICIIDQSNP 72
           ME+ EKKSPS      P  ++SRK        +ESES++AEL+RFESFLKWICI+D SNP
Sbjct: 1   MEDPEKKSPSPSPSPSPSQINSRKSELKLESESESESDSAELRRFESFLKWICIMDHSNP 60

Query: 73  FSASLSCFVFFVFAFAVPIASHFALSCSDCDEDHQRPFHVVVQVSLSAVATLSFACLSIW 132
           F+A+LSCF+F  FA AVPIASHFALSCSDCDEDH+RPFHVVVQ+SLSAVATLSF CLS W
Sbjct: 61  FTATLSCFLFSAFAIAVPIASHFALSCSDCDEDHRRPFHVVVQLSLSAVATLSFGCLSTW 120

Query: 133 LRLFGLNRFLFLDKLCEASPKVRDEYSKQLK 154
           LR  GL+RFLFLDKLCE+S K RDEYSKQLK
Sbjct: 121 LRHLGLSRFLFLDKLCESSHKARDEYSKQLK 151

[Close]

BLAST of Lag0024609.1 vs. ExPASy TrEMBL
Match: A0A5A7UJ39 (Extracellular ligand-gated ion channel protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001060 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 4.8e-50
Identity = 106/139 (76.26%), Postives = 119/139 (85.61%), Query Frame = 0


Query: 16  EEKKSPSQIDLYQPLDSR-KAESESEAAELKRFESFLKWICIIDQSNPFSASLSCFVFFV 75
           EEKKS  Q+D  +   +  ++ESE EAAEL+RFESFLKWICI+D SN + ASLSC VFFV
Sbjct: 5   EEKKSQPQMDSQKSKSAESESESELEAAELRRFESFLKWICIMDHSNLYRASLSCIVFFV 64

Query: 76  FAFAVPIASHFALSCSDCDEDHQRPFHVVVQVSLSAVATLSFACLSIWLRLFGLNRFLFL 135
           F  AVPIASHFALSCSDCDEDHQRPFHVVVQ+SLSAVATLSF CLS+WLRLFGLNRFLFL
Sbjct: 65  FGIAVPIASHFALSCSDCDEDHQRPFHVVVQLSLSAVATLSFLCLSLWLRLFGLNRFLFL 124

Query: 136 DKLCEASPKVRDEYSKQLK 154
           DKL EASPK+R EY +QL+
Sbjct: 125 DKLSEASPKIRAEYFRQLQ 143

[Close]

BLAST of Lag0024609.1 vs. ExPASy TrEMBL
Match: A0A6J1EG16 (uncharacterized protein LOC111433990 OS=Cucurbita moschata OX=3662 GN=LOC111433990 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 4.8e-50
Identity = 104/141 (73.76%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 13  MENEEKKSPSQIDLYQPLDSRKAESESEAAELKRFESFLKWICIIDQSNPFSASLSCFVF 72
           M+N  KKSPS      P+DS+++ESE EA EL+R ESFLKWICI DQSNP+ ASLSC +F
Sbjct: 1   MKNRGKKSPS------PMDSQESESELEAPELRRLESFLKWICINDQSNPYRASLSCLIF 60

Query: 73  FVFAFAVPIASHFALSCSDCDEDHQRPFHVVVQVSLSAVATLSFACLSIWLRLFGLNRFL 132
           F+FA AVP+ASHFALSCSDCDEDHQRPFHVVVQ+SLSAVA LSF  LS+WLRLFG NRFL
Sbjct: 61  FIFAIAVPLASHFALSCSDCDEDHQRPFHVVVQLSLSAVAMLSFLSLSLWLRLFGFNRFL 120

Query: 133 FLDKLCEASPKVRDEYSKQLK 154
           FLDKL +ASP+VR EYS+QL+
Sbjct: 121 FLDKLSKASPRVRAEYSRQLQ 135

[Close]

BLAST of Lag0024609.1 vs. ExPASy TrEMBL
Match: A0A1S3C949 (uncharacterized protein LOC103498231 OS=Cucumis melo OX=3656 GN=LOC103498231 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 4.8e-50
Identity = 106/139 (76.26%), Postives = 119/139 (85.61%), Query Frame = 0


Query: 16  EEKKSPSQIDLYQPLDSR-KAESESEAAELKRFESFLKWICIIDQSNPFSASLSCFVFFV 75
           EEKKS  Q+D  +   +  ++ESE EAAEL+RFESFLKWICI+D SN + ASLSC VFFV
Sbjct: 5   EEKKSQPQMDSQKSKSAESESESELEAAELRRFESFLKWICIMDHSNLYRASLSCIVFFV 64

Query: 76  FAFAVPIASHFALSCSDCDEDHQRPFHVVVQVSLSAVATLSFACLSIWLRLFGLNRFLFL 135
           F  AVPIASHFALSCSDCDEDHQRPFHVVVQ+SLSAVATLSF CLS+WLRLFGLNRFLFL
Sbjct: 65  FGIAVPIASHFALSCSDCDEDHQRPFHVVVQLSLSAVATLSFLCLSLWLRLFGLNRFLFL 124

Query: 136 DKLCEASPKVRDEYSKQLK 154
           DKL EASPK+R EY +QL+
Sbjct: 125 DKLSEASPKIRAEYFRQLQ 143

[Close]

BLAST of Lag0024609.1 vs. TAIR 10
Match: AT3G20300.1 (Protein of unknown function (DUF3537) )

HSP 1 Score: 114.8 bits (286), Expect = 8.2e-26
Identity = 58/110 (52.73%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 43  ELKRFESFLKWICIIDQSNPFSASLSCFVFFVFAFAVPIASHFALSCSDCDEDHQRPFHV 102
           EL  F  +L+W+C +DQS+P++A LS  +F VF   VP  SHF L+CSDCD  H RP+  
Sbjct: 42  ELHSFRKYLRWMC-VDQSSPWTAVLSWSMFVVFTLVVPATSHFMLACSDCDSHHSRPYDS 101

Query: 103 VVQVSLSAVATLSFACLSIWLRLFGLNRFLFLDKLCEASPKVRDEYSKQL 153
           VVQ+SLS+ A LSF CLS ++  +GL RFLF DKL + S  VR  Y+ QL
Sbjct: 102 VVQLSLSSFAALSFLCLSRFVSKYGLRRFLFFDKLWDESETVRLGYTNQL 150

[Close]

BLAST of Lag0024609.1 vs. TAIR 10
Match: AT1G50630.1 (Protein of unknown function (DUF3537) )

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-25
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 43  ELKRFESFLKWICIIDQSNPFSASLSCFVFFVFAFAVPIASHFALSCSDCDEDHQRPFHV 102
           EL  F  +L+W+C +D S+P++A LS  +F VF   VP  SHF L+C+DCD  H RP+  
Sbjct: 36  ELHSFRKYLRWMC-VDHSSPWTAILSWTMFIVFTLVVPAISHFLLACADCDSYHSRPYDS 95

Query: 103 VVQVSLSAVATLSFACLSIWLRLFGLNRFLFLDKLCEASPKVRDEYSKQL 153
           VVQ+SLS+VAT+SF CL+ ++  +GL RFLF DKL + S  VR  Y+ QL
Sbjct: 96  VVQLSLSSVATVSFLCLTRFVSKYGLRRFLFFDKLWDESETVRRNYTNQL 144

[Close]

BLAST of Lag0024609.1 vs. TAIR 10
Match: AT1G50630.2 (Protein of unknown function (DUF3537) )

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-25
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 43  ELKRFESFLKWICIIDQSNPFSASLSCFVFFVFAFAVPIASHFALSCSDCDEDHQRPFHV 102
           EL  F  +L+W+C +D S+P++A LS  +F VF   VP  SHF L+C+DCD  H RP+  
Sbjct: 36  ELHSFRKYLRWMC-VDHSSPWTAILSWTMFIVFTLVVPAISHFLLACADCDSYHSRPYDS 95

Query: 103 VVQVSLSAVATLSFACLSIWLRLFGLNRFLFLDKLCEASPKVRDEYSKQL 153
           VVQ+SLS+VAT+SF CL+ ++  +GL RFLF DKL + S  VR  Y+ QL
Sbjct: 96  VVQLSLSSVATVSFLCLTRFVSKYGLRRFLFFDKLWDESETVRRNYTNQL 144

[Close]

BLAST of Lag0024609.1 vs. TAIR 10
Match: AT4G22270.1 (Protein of unknown function (DUF3537) )

HSP 1 Score: 107.8 bits (268), Expect = 1.0e-23
Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 49  SFLKWICIIDQSNPFSASLSCFVFFVFAFAVPIASHFALSCSDCDEDHQRPFHVVVQVSL 108
           +F+  +   DQSN  +A LS  VFF+    VP+ SHF L CSDCD  H+RP+ V+VQ+SL
Sbjct: 34  TFMSLVLWFDQSNFGTALLSWSVFFLLVVIVPLISHFLLVCSDCDFHHRRPYDVIVQLSL 93

Query: 109 SAVATLSFACLSIWLRLFGLNRFLFLDKLCEASPKVRDEYSKQLK 154
           S  A +SF  LSIW R FG+ RFLFLDKL + S KVR EY  +++
Sbjct: 94  SIFAGISFVSLSIWSRKFGMRRFLFLDKLWDVSDKVRIEYEAEIQ 138

[Close]

BLAST of Lag0024609.1 vs. TAIR 10
Match: AT4G03820.1 (Protein of unknown function (DUF3537) )

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-19
Identity = 52/116 (44.83%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 38  ESEAAELKRFESFLKWICIIDQSNPFSASLSCFVFFVFAFAVPIASHFALSCSDCDEDHQ 97
           ES A +L    SF +     DQSN     LS  +FF+ A  VP+ SHF L C+DCD  H+
Sbjct: 24  ESPATKL----SFPRLFLWFDQSNRIKTLLSWSIFFLLAVIVPMISHFVLICADCDFKHR 83

Query: 98  RPFHVVVQVSLSAVATLSFACLSIWLRLFGLNRFLFLDKLCEASPKVRDEYSKQLK 154
           RP+  +VQ+SLS  A +SF  LS W + +G+ RFLF DKL + S KVR  Y  +++
Sbjct: 84  RPYDGLVQLSLSIFAGISFVSLSDWSKKYGIRRFLFFDKLKDVSDKVRIGYEAKIQ 135

The following BLAST results are available for this feature:

BLAST of Lag0024609.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893800.1	1.4e-51	74.48	uncharacterized protein LOC120082620 [Benincasa hispida]	[more]
XP_022994504.1	2.6e-50	70.97	uncharacterized protein LOC111490209 [Cucurbita maxima]	[more]
XP_022954540.1	5.8e-50	72.19	uncharacterized protein LOC111456780 [Cucurbita moschata]	[more]
KAG6583771.1	1.0e-49	73.76	hypothetical protein SDJN03_19703, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7032428.1	1.0e-49	73.76	hypothetical protein SDJN02_06473 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lag0024609.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0024609.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K314	1.3e-50	70.97	uncharacterized protein LOC111490209 OS=Cucurbita maxima OX=3661 GN=LOC111490209...	[more]
A0A6J1GSP8	2.8e-50	72.19	uncharacterized protein LOC111456780 OS=Cucurbita moschata OX=3662 GN=LOC1114567...	[more]
A0A5A7UJ39	4.8e-50	76.26	Extracellular ligand-gated ion channel protein OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1EG16	4.8e-50	73.76	uncharacterized protein LOC111433990 OS=Cucurbita moschata OX=3662 GN=LOC1114339...	[more]
A0A1S3C949	4.8e-50	76.26	uncharacterized protein LOC103498231 OS=Cucumis melo OX=3656 GN=LOC103498231 PE=...	[more]

BLAST of Lag0024609.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20300.1	8.2e-26	52.73	Protein of unknown function (DUF3537)	[more]
AT1G50630.1	1.4e-25	50.91	Protein of unknown function (DUF3537)	[more]
AT1G50630.2	1.4e-25	50.91	Protein of unknown function (DUF3537)	[more]
AT4G22270.1	1.0e-23	52.38	Protein of unknown function (DUF3537)	[more]
AT4G03820.1	1.5e-19	44.83	Protein of unknown function (DUF3537)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021924	Protein of unknown function DUF3537	PFAM	PF12056	DUF3537	coord: 43..154 e-value: 1.8E-36 score: 125.9
IPR021924	Protein of unknown function DUF3537	PANTHER	PTHR31963	RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K	coord: 32..154
None	No IPR available	PANTHER	PTHR31963:SF17	PROTEIN, PUTATIVE (DUF3537)-RELATED	coord: 32..154

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0024609	Lag0024609	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0024609.1.exon1	Lag0024609.1.exon1	exon
Lag0024609.1.exon2	Lag0024609.1.exon2	exon
Lag0024609.1.exon3	Lag0024609.1.exon3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0024609.1	cds.Lag0024609.1	CDS
cds.Lag0024609.1	cds.Lag0024609.1_2	CDS
cds.Lag0024609.1	cds.Lag0024609.1_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0024609.1	Lag0024609.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane