Lag0020840.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTCTGAAGTGAATGCTGCAGATTTTGTTTTGAAGTGCCAGGTTGTTTCTGTTTTTTTCTTACATATTGCCTAAAGTGCATTTTGAATCTTTTTCTGATGCCATCTGAAAACCTCTCATTTCTCTCCTGTTTTTTCTTGTGATAAATGCCAATGATGTCACAAGAACAGTAGGGTTTTATTTTCAACAACCAATGGATGAGCTTCCATGTGACCATCCTTAGCTTTTTTTAATTATCTTGAAAATTGAAAGTTTTGAATTATAATTTTAGTTTGAACCACCATGGATTAGTTGAGTGGTTGATGAGAACCATAGAAAAAATAAAGGGTTAAGTTCAATCCTTGATGGTCACATACTTGGAATTTAATATCCTACAACGATCAAATGTGAGATAGGCGATTGTTCCATCTCGTTAAATTAGTTGAGGTGTGTGCAACCTGACTCGAATATTCACGGATATATATATAAGAAAAAACTATAATTTTAGTTTGTATTAATTTCAATTGAGTGTTTATGCTATAAAAAGTTTTATCTATTTCCTTCAATTAACTTTTATTATTCTTGGCTTCAATGAAAAGTAACAAAAATTCTACTTGGTAAGCTGTTTGTGTCTGTCTGCATGCTAGGATAAATAAGAGTAAAATCTATTGGTCATTATTGATTTCACTTTAAAATATAATTTTTTAAAATTTATTTCTACTTTCAAAATAATGTCTTAATATTCGATTCAAATTATGTTTTTTAAAAAATAATATGACTTATTACGTCACATCATTAAAGCAAAATATTAGATAACAAAACTTAAAATATCACCTTTACGAACAATACTATAATACACGGAATTATTGTACTCTTCACCAATAAACATAACTGATGGTAAGTTTTAGCCAAAATGATAGAGCAACTGTAAAACTAATTCTAAGAAATGAAGATTAAAAATGTGAGGTTAAAATATTATTTTGGTCTTTGTACTATATGATTGTTCTATTTTTTTTTTGAAAAATATGACTTGTTCTATTTTAGTTCTTATACTTTCAAATGTTGAAATTTACTATTGATACTTTCCATAAATCTTAAATGTAGTCTAGTGTTTTTGTTTTCCTAAAAAAATTGTTTTTTTTTTTTTTTTTTTTTTTTGTCTCCATTAAGTTTATTTTTATAAATTTTGGAAACATATTTATATTGTGTCTTTGATTGAATAAAATAATAATAATTATTGTTCCAAGTTTGATGGAAACAAACTTCAAACTAACCATGGAGACTAATATTAAGATTTATAGAAAATATACAAACTAAATTTGGATATTTGAAAATAGGTTTAGATTTAATGAGATTTCTCACATAGATAAATTAATAAACTAATTTGGGAACCAATAGTTTTATAAGGAACAAAGTCTAATTATTAAATAATAAAAACCAACATTTAATTTTGATGTTTTTTTTTTTTGTGACAAGGATTAAATTATTAAGAATTTGAAAGTACATGAACTAAATTGTTACAAAATTGAAAGTACATGGACTAGATCGTTACAAATCAAAGTTCAGGAACTAAATTGTCACTTTTATGAAAGCTCAGGGGACTAAAAGCGATTTTTAACCTTGAAAATACGACTAAAATAAAATGAGTCTCATATTACAGTACCACAATGATATTTTAACCAAAATGTAAATTAACAACGAGAAAAATACTTTCCAACTAATGAAATAAAAATTGATATGTCATTCTATCCACCTCAACACATATCAATATTTCGTTAGGTTAAAGTTAAATAAAGGACTATTTAAAATCATTTTGCAAACTTGGAGGACTAAAATGTCATTTTTGATTTGAGTCTCAAATCAAAAGTGCATTTTGCACCCAAAAAAAATTATTTGGGGATTTTATTTTATTTTTTTTTTCATTTAAAAAAAAATCCTCAATTTTACACAAAACCCTCTATCCAAGCCTGAAGAAAATTGGGCTTTATATTGTGCAATTTTACACAAATTCATTGGAACAGCCCATCCGTATAAATAGATTGGGCCGATCAAAACGCTGTCGTTTATTCCTTCAATTCCTTCCCATTTTTCTTGAGCGAAAAGACACCGTGGGATCTAAAGAAAAGAAGCGAGCAAGCTTAGAAAAACCAGAGCAAGTTTCTTGCCTTTGCTTTGCTAAGTTCCTCTTCTCTCAGACGCCTTCGCTTTTATCTGCCCTATTCGCCATGACGAAGCAGCAAGCCAACTGGTCCCCTTACGACAACAATGGCGGGTACTTTCTCTCTCTCTCAATCTCTCTGCAGCGTTTCGATGTTTCTTTTATCTGTTACGGTGACGAATCAGTGAGAAACTTTGTGCAGATCCTGTGTCGCGATTGCCGGTGCCGATTACTGTGTAATCGCCGCTGATACTCGGTTGTCTACGGGTTACAATATCCTCACTCGCGATTACTCCAAAATTTGTAAGCTGTACGTCAATCTCTTATCGAATTTAGCTTTATTTTGGAATTTGAATGCTTAAGGTCACTCGAGTTTCAGAGCGGCTTTCCGAATTATGTGGTTTGGTGTTTATTTTATTTTCTATGTGTATTAGAAATGGATCCTTTCCCCCTTTGTAGTGTTTTTTTTTACTCCTGGAAATTGTATTGCGCTTCGGGTTTATTTATGTTTTTGTGGCTATTACTTGGGGGTAGACTTGTGGATTTTAGAGTTCTCTCAGGGTTATAGTTGGGTGGGCTTTTGAACGAAATGAGCGGTAACTTATTTTGAAGATTGTGCATTGGTGTGTAACAATGGCTGGATTAGCTTGTGAATGTGATTGGTGCCAGCTTACTTGAACTATGGTGCTGTGCAAATTGGAAATTTGGTCATTTCGTGCTTTTGTTTGGAAGGTTTTGGTTTTGCCTACGAAGGGTTATGGATCCGTTAGTGGTATCGACGAAAGGTTATGAAAGTAGTAATGGAGGTTTATTCTTTTAAGATTGATGGATCCGTTGGATGCTGAGTTTATCACTTGTGATTTTTGTGTTTATTGATACCTGTTGGTTAATGAGTTGGGAGATAAATTATCTGTACATCCTAACTTTAGTTCAAGGAGCTAATTGGTCTATGATACTCCTTTTTGTGAATGTGAAAGAGAGCCTCCTTTGTTTTGATAGAAAGGAAAGAAACAATCATTTCTCAACTTTTGGTTGTGTTTTTGAATTCTATTGTACTGAGATATGACTAGATTTAGAATGTAATTCAATTGGTCGAATGGTATGTATAATGTATGCGATTGTTATATGATTTCCTCAATTTGGTCATGGCAGATTTCCTCGTGTTTTGTTATTGAACTTCATCTAATATGGATTCTCGATCATGCTAATTCCATGACAAGAGTTCCATATAATGCATTTTTGGTTCTATTGTTGTGATGATAATAATATACTTTACTCACCTTAAAGCTCATTCATCCACACACGTCTTACATTGCACTGATGTGCTTATTTATGATTCTTGATGTTGCAGGGCTGACAAAGCTGTGATGGCCTCTTCTGGTTTTCAAGCTGATGTGAAAGCCTTACAAAAGGTTTTGGCGGCTAGGCATTTGGTGAGACTTTTATCTAAATGAATATGTCTAATTAGGTTGATCTCTGTAATCCATATTAGCTAAATGCTATGCTATAAGCTTCGTTTTCAAGACTTTGAGTTTTTGATGCACCTAATTGTTCTCATTTTCTGTGAGTTCGATATTGTGTGGGTTACTAATTTCTACCTGAAGATTTATCCCTTTAATGAGACTCCTTTTTTTTTTTTTTTTTTTGATTTCGATATCTGTTTTTGTAGGTGAGCTTGTATCAGGCTTGGATTATTGTATATTATTGTTGGTGCTGCATTCCTTAAAATTAGGATAGTATGGTTTTAAGATTTCCAACACCATGCTTCCCAAGTGACATTTTGTTCCTAGCCTTTTGTTTATAGTTGAGACATTCACTGGTGTTTTTGATGTCACAATGATGTTTTGATCTTATAACGATTTTTGGAGGGAAGTGACTATAACTTTCCTTTTTGTGATTTTCTATACTGTAATCTTTAATTTTTTTTTAACAAGTTTTGCGTACATCTTGATATTTGAGCCCTTTTCCCTTTTGGGCTTCTGATCCCATCCCAGTCTTTCATGCATAAACTAATTTTGTTCGTAGTGGAACTCTATTTTTCTTTTGAAATGTATTACAAGGATTGCCTTCAAAAGTTGAATTGAACTATGTGCCGAGGGAAGCAGATGAACAAAACGTCTTGTCAATTTCAGTTTTTAAATTTATTAGGTATTTTAGACGTAAGATTTTGGGTCGAAGGATTGGAATATGATTCATTATTTTGATGCTGCATATGTTGTTCCATTTCAGACCTACCAACATCAGCACAACAAGCAAATGAGCTGCCCCGCGATGGCTCAACTGCTCTCAAATACATTGTACTTCAAACGGTTCTTTCCTTATTATGCTTTTAACGTTTTGGGCGGACTTGATAACGAAGGTACATGACTTCCCTGATTGTAATTCCAGTTTTATGCCTCACTTTCCCATTAACTATAAGTTATTCTCTTCTTGAAATAGGAAAGGGTTGTGTGTTCACCTATGATGCTGTTGGTTCTTATGAGAGAGTTGGATACAGCGCTCAGGGGTCGGGGTCTACCCTCATTACGCCCTTTTTGGATAACCAACTGAAGTCTCCCAGCCCTCTATTATTGCCTGCACAGGTATGACCTTACCCTTCCTTGGGAGGAATGTAAATGGAAATGACATGTCGGTTCAAGAAACGCGAGGTTTACTTTGCCTATCTGATAGTTCAAAGTTGAAACCAACCGTTCCAACTCGGTCCGGTTCACTCTGTTGTTTATCCTGTTTTGCCGTGCAATACTCTTTCCTCCTCTTTGGTATATCTCTCTCTCAGCTAACAAATTATGATGAACAGGATTCTGCAACGCCTCTTTCAGAAGCCGAAGCAATTGACCTGGTGAAAACCGTTTTTGCATCTGCTACTGAGAGGGATATCTACACTGTAATTTTCTTCCACTATTTATGTACCCTCATTCTGAATAAGTATTTGTTTGGATTCCAACTCGAAATTTTGTGTTATTGACAGGGTGACAAACTCGAAATCGTCATTCTTAATGCCGATGGTATTCGTCGTGAATACATGGATCTCCGAAAAGATTAG ATGGTGTCTGAAGTGAATGCTGCAGATTTTGTTTTGAAGTGCCAGACGCCTTCGCTTTTATCTGCCCTATTCGCCATGACGAAGCAGCAAGCCAACTGGTCCCCTTACGACAACAATGGCGGATCCTGTGTCGCGATTGCCGGTGCCGATTACTGTGTAATCGCCGCTGATACTCGGTTGTCTACGGGTTACAATATCCTCACTCGCGATTACTCCAAAATTTGTAAGCTGGCTGACAAAGCTGTGATGGCCTCTTCTGGTTTTCAAGCTGATGTGAAAGCCTTACAAAAGGTTTTGGCGGCTAGGCATTTGACCTACCAACATCAGCACAACAAGCAAATGAGCTGCCCCGCGATGGCTCAACTGCTCTCAAATACATTGTACTTCAAACGGTTCTTTCCTTATTATGCTTTTAACGTTTTGGGCGGACTTGATAACGAAGGAAAGGGTTGTGTGTTCACCTATGATGCTGTTGGTTCTTATGAGAGAGTTGGATACAGCGCTCAGGGGTCGGGGTCTACCCTCATTACGCCCTTTTTGGATAACCAACTGAAGTCTCCCAGCCCTCTATTATTGCCTGCACAGGATTCTGCAACGCCTCTTTCAGAAGCCGAAGCAATTGACCTGGTGAAAACCGTTTTTGCATCTGCTACTGAGAGGGATATCTACACTGGTGACAAACTCGAAATCGTCATTCTTAATGCCGATGGTATTCGTCGTGAATACATGGATCTCCGAAAAGATTAG ATGGTGTCTGAAGTGAATGCTGCAGATTTTGTTTTGAAGTGCCAGACGCCTTCGCTTTTATCTGCCCTATTCGCCATGACGAAGCAGCAAGCCAACTGGTCCCCTTACGACAACAATGGCGGATCCTGTGTCGCGATTGCCGGTGCCGATTACTGTGTAATCGCCGCTGATACTCGGTTGTCTACGGGTTACAATATCCTCACTCGCGATTACTCCAAAATTTGTAAGCTGGCTGACAAAGCTGTGATGGCCTCTTCTGGTTTTCAAGCTGATGTGAAAGCCTTACAAAAGGTTTTGGCGGCTAGGCATTTGACCTACCAACATCAGCACAACAAGCAAATGAGCTGCCCCGCGATGGCTCAACTGCTCTCAAATACATTGTACTTCAAACGGTTCTTTCCTTATTATGCTTTTAACGTTTTGGGCGGACTTGATAACGAAGGAAAGGGTTGTGTGTTCACCTATGATGCTGTTGGTTCTTATGAGAGAGTTGGATACAGCGCTCAGGGGTCGGGGTCTACCCTCATTACGCCCTTTTTGGATAACCAACTGAAGTCTCCCAGCCCTCTATTATTGCCTGCACAGGATTCTGCAACGCCTCTTTCAGAAGCCGAAGCAATTGACCTGGTGAAAACCGTTTTTGCATCTGCTACTGAGAGGGATATCTACACTGGTGACAAACTCGAAATCGTCATTCTTAATGCCGATGGTATTCGTCGTGAATACATGGATCTCCGAAAAGATTAG MVSEVNAADFVLKCQTPSLLSALFAMTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVMASSGFQADVKALQKVLAARHLTYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDNEGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPSPLLLPAQDSATPLSEAEAIDLVKTVFASATERDIYTGDKLEIVILNADGIRREYMDLRKD Homology
BLAST of Lag0020840.1 vs. NCBI nr
Match: KAG6582562.1 (Proteasome subunit beta type-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 461.5 bits (1186), Expect = 4.7e-126 Identity = 231/234 (98.72%), Postives = 233/234 (99.57%), Query Frame = 0
BLAST of Lag0020840.1 vs. NCBI nr
Match: KAG6597195.1 (Proteasome subunit beta type-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 456.8 bits (1174), Expect = 1.2e-124 Identity = 228/234 (97.44%), Postives = 231/234 (98.72%), Query Frame = 0
BLAST of Lag0020840.1 vs. NCBI nr
Match: XP_022924840.1 (proteasome subunit beta type-1 [Cucurbita moschata] >XP_022980398.1 proteasome subunit beta type-1 [Cucurbita maxima] >XP_023527434.1 proteasome subunit beta type-1 [Cucurbita pepo subsp. pepo] >KAG7018944.1 Proteasome subunit beta type-1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 445.7 bits (1145), Expect = 2.7e-121 Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Lag0020840.1 vs. NCBI nr
Match: XP_038898567.1 (proteasome subunit beta type-1 [Benincasa hispida]) HSP 1 Score: 444.9 bits (1143), Expect = 4.6e-121 Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Lag0020840.1 vs. NCBI nr
Match: XP_022942711.1 (proteasome subunit beta type-1-like [Cucurbita moschata] >XP_022974164.1 proteasome subunit beta type-1-like [Cucurbita maxima]) HSP 1 Score: 444.5 bits (1142), Expect = 6.0e-121 Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Lag0020840.1 vs. ExPASy Swiss-Prot
Match: O82531 (Proteasome subunit beta type-1 OS=Petunia hybrida OX=4102 GN=PBF1 PE=2 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 4.3e-114 Identity = 202/223 (90.58%), Postives = 214/223 (95.96%), Query Frame = 0
BLAST of Lag0020840.1 vs. ExPASy Swiss-Prot
Match: P42742 (Proteasome subunit beta type-1 OS=Arabidopsis thaliana OX=3702 GN=PBF1 PE=1 SV=2) HSP 1 Score: 404.1 bits (1037), Expect = 1.2e-111 Identity = 199/223 (89.24%), Postives = 211/223 (94.62%), Query Frame = 0
BLAST of Lag0020840.1 vs. ExPASy Swiss-Prot
Match: O64464 (Proteasome subunit beta type-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PBF1 PE=2 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 2.7e-100 Identity = 177/213 (83.10%), Postives = 195/213 (91.55%), Query Frame = 0
BLAST of Lag0020840.1 vs. ExPASy Swiss-Prot
Match: Q86A21 (Proteasome subunit beta type-1 OS=Dictyostelium discoideum OX=44689 GN=psmB1 PE=3 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.1e-53 Identity = 114/234 (48.72%), Postives = 158/234 (67.52%), Query Frame = 0
BLAST of Lag0020840.1 vs. ExPASy Swiss-Prot
Match: Q9IB84 (Proteasome subunit beta type-1-A OS=Carassius auratus OX=7957 GN=psmb1-A PE=2 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 5.5e-53 Identity = 105/216 (48.61%), Postives = 144/216 (66.67%), Query Frame = 0
BLAST of Lag0020840.1 vs. ExPASy TrEMBL
Match: A0A6J1IZ68 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111479776 PE=3 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 1.3e-121 Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Lag0020840.1 vs. ExPASy TrEMBL
Match: A0A6J1EG74 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111432207 PE=3 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 1.3e-121 Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Lag0020840.1 vs. ExPASy TrEMBL
Match: A0A6J1IGT1 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111472752 PE=3 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 2.9e-121 Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Lag0020840.1 vs. ExPASy TrEMBL
Match: A0A6J1FPP2 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111447663 PE=3 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 2.9e-121 Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Lag0020840.1 vs. ExPASy TrEMBL
Match: A0A5D3D235 (Proteasome subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003970 PE=3 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 2.4e-120 Identity = 218/223 (97.76%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Lag0020840.1 vs. TAIR 10
Match: AT3G60820.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein ) HSP 1 Score: 404.1 bits (1037), Expect = 8.3e-113 Identity = 199/223 (89.24%), Postives = 211/223 (94.62%), Query Frame = 0
BLAST of Lag0020840.1 vs. TAIR 10
Match: AT3G60820.3 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein ) HSP 1 Score: 404.1 bits (1037), Expect = 8.3e-113 Identity = 199/223 (89.24%), Postives = 211/223 (94.62%), Query Frame = 0
BLAST of Lag0020840.1 vs. TAIR 10
Match: AT3G60820.2 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein ) HSP 1 Score: 398.7 bits (1023), Expect = 3.5e-111 Identity = 197/223 (88.34%), Postives = 210/223 (94.17%), Query Frame = 0
BLAST of Lag0020840.1 vs. TAIR 10
Match: AT1G21720.1 (proteasome beta subunit C1 ) HSP 1 Score: 80.1 bits (196), Expect = 2.8e-15 Identity = 61/216 (28.24%), Postives = 98/216 (45.37%), Query Frame = 0
BLAST of Lag0020840.1 vs. TAIR 10
Match: AT1G77440.1 (20S proteasome beta subunit C2 ) HSP 1 Score: 78.2 bits (191), Expect = 1.0e-14 Identity = 56/217 (25.81%), Postives = 96/217 (44.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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