Lag0019846.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0019846.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionethylene-responsive transcription factor ERF106-like
Locationchr5: 46016971 .. 46017549 (+)
Sequence length579
RNA-Seq ExpressionLag0019846.1
SyntenyLag0019846.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCCTCTGAAGAATTCTTCACCTTAGAAGTCATCACTCAATTTCTATTGGGAGATTTTGCCGATCAGAATCAAACCCATTTCCAAACAGACTTCCCCTTTCTCCACCACATCAAATTGGAAGATTTCTCCTTCGATTTCCAAATTCCGCCGCCGCAGACGCCGCCGCCGCCGGCGGAAGAATCCGACAACGGGACGAAGTCCGGCGTAGCAGTCGACTTGCCGACGCCGAAGACAGAGGCCCGGCATGAAGCCGCCGTGGCAGGGAGTGCCGGCGGGAAGGGGAGGAGGCATTTCCGGGGAGTACGGCGGCGGCCGTGGGGGAAATTTGCGGCGGAGATCCGTGACCCGACCCGGAAGGGGACCCGGGTTTGGTTGGGGACTTATGACAGTGATATAGACGCGGCGAAGGCTTACGACTGTGCGGCGTTTAGGCTGAGAGGGAGAAAAGCCATATTGAATTTTCCGTTGGAGGCCGGAGAACCCGACCCGCCGGCGGCGGCGGCGGAGCCGAAGAGGGGAAGGCGGAAATGGAGGAATGTGACGAAGGCATTGATGGCAATGGATGAGAAGTGA

mRNA sequence

ATGGCGTCCTCTGAAGAATTCTTCACCTTAGAAGTCATCACTCAATTTCTATTGGGAGATTTTGCCGATCAGAATCAAACCCATTTCCAAACAGACTTCCCCTTTCTCCACCACATCAAATTGGAAGATTTCTCCTTCGATTTCCAAATTCCGCCGCCGCAGACGCCGCCGCCGCCGGCGGAAGAATCCGACAACGGGACGAAGTCCGGCGTAGCAGTCGACTTGCCGACGCCGAAGACAGAGGCCCGGCATGAAGCCGCCGTGGCAGGGAGTGCCGGCGGGAAGGGGAGGAGGCATTTCCGGGGAGTACGGCGGCGGCCGTGGGGGAAATTTGCGGCGGAGATCCGTGACCCGACCCGGAAGGGGACCCGGGTTTGGTTGGGGACTTATGACAGTGATATAGACGCGGCGAAGGCTTACGACTGTGCGGCGTTTAGGCTGAGAGGGAGAAAAGCCATATTGAATTTTCCGTTGGAGGCCGGAGAACCCGACCCGCCGGCGGCGGCGGCGGAGCCGAAGAGGGGAAGGCGGAAATGGAGGAATGTGACGAAGGCATTGATGGCAATGGATGAGAAGTGA

Coding sequence (CDS)

ATGGCGTCCTCTGAAGAATTCTTCACCTTAGAAGTCATCACTCAATTTCTATTGGGAGATTTTGCCGATCAGAATCAAACCCATTTCCAAACAGACTTCCCCTTTCTCCACCACATCAAATTGGAAGATTTCTCCTTCGATTTCCAAATTCCGCCGCCGCAGACGCCGCCGCCGCCGGCGGAAGAATCCGACAACGGGACGAAGTCCGGCGTAGCAGTCGACTTGCCGACGCCGAAGACAGAGGCCCGGCATGAAGCCGCCGTGGCAGGGAGTGCCGGCGGGAAGGGGAGGAGGCATTTCCGGGGAGTACGGCGGCGGCCGTGGGGGAAATTTGCGGCGGAGATCCGTGACCCGACCCGGAAGGGGACCCGGGTTTGGTTGGGGACTTATGACAGTGATATAGACGCGGCGAAGGCTTACGACTGTGCGGCGTTTAGGCTGAGAGGGAGAAAAGCCATATTGAATTTTCCGTTGGAGGCCGGAGAACCCGACCCGCCGGCGGCGGCGGCGGAGCCGAAGAGGGGAAGGCGGAAATGGAGGAATGTGACGAAGGCATTGATGGCAATGGATGAGAAGTGA

Protein sequence

MASSEEFFTLEVITQFLLGDFADQNQTHFQTDFPFLHHIKLEDFSFDFQIPPPQTPPPPAEESDNGTKSGVAVDLPTPKTEARHEAAVAGSAGGKGRRHFRGVRRRPWGKFAAEIRDPTRKGTRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAAAEPKRGRRKWRNVTKALMAMDEK
Homology
[Close]
BLAST of Lag0019846.1 vs. NCBI nr
Match: XP_038878226.1 (ethylene-responsive transcription factor ERF106-like [Benincasa hispida])

HSP 1 Score: 275.4 bits (703), Expect = 3.7e-70
Identity = 145/199 (72.86%), Postives = 160/199 (80.40%), Query Frame = 0 

Query: 1   MASSEEFFTLEVITQFLLGDFADQNQTHFQTDFPFLHHIKLEDFSFDFQIPPPQTPPPPA 60
           MASSEEF T+E ITQFLLGDF+D +QTHF TD P+LH IKLEDF FD  IPP   PPPP 
Sbjct: 1   MASSEEFLTIEFITQFLLGDFSD-HQTHFPTDSPYLHPIKLEDFFFDSPIPP---PPPPP 60

Query: 61  EESDNGTKSGVAVDLPTPKTE-------ARHEAAVAGSAGGKGRRHFRGVRRRPWGKFAA 120
           E SDN TK G  +D  TP+ +       A  EAAV G++GGKGRRHFRGVRRRPWGKFAA
Sbjct: 61  EISDNETKPGEVLDPSTPEPDVSEQIRGAETEAAVVGASGGKGRRHFRGVRRRPWGKFAA 120

Query: 121 EIRDPTRKGTRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAAAEPK 180
           EIRDPT+KG+RVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEP+PPA A   +
Sbjct: 121 EIRDPTQKGSRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPNPPAEADRKR 180

Query: 181 RGRRKWRNVTKALMAMDEK 193
           R  +KWR V KALMAM+EK
Sbjct: 181 RKGQKWRTVPKALMAMNEK 195

[Close]
BLAST of Lag0019846.1 vs. NCBI nr
Match: KAG6576825.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 267.3 bits (682), Expect = 1.0e-67
Identity = 147/202 (72.77%), Postives = 160/202 (79.21%), Query Frame = 0 

Query: 1   MASSEEFFTLEVITQFLLGDFADQNQTHFQTDFPFLHHIKLEDFSFDFQIPPPQTPPPPA 60
           MASSEEF ++E ITQFLL D +D +QTHFQTD PFLH IKLEDF FD  +PP    PPPA
Sbjct: 1   MASSEEFLSIEFITQFLLVDSSD-HQTHFQTDSPFLHSIKLEDFIFDSPVPP---SPPPA 60

Query: 61  EESDNGTKSGVAVDLPTPKTE-------ARHEAAVAG--SAGGKGRRHFRGVRRRPWGKF 120
           E   N TK+G  VD  TPKT+       A  EA+VAG     GKGR HFRGVRRRPWGKF
Sbjct: 61  EGCYNNTKAGEVVDWSTPKTDMSGQASKADAEASVAGKTDTDGKGRSHFRGVRRRPWGKF 120

Query: 121 AAEIRDPTRKGTRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAAAE 180
           AAEIRDPTRKG RVWLGTYDSDIDAAKAYDCAAFRLRGRKA+LNFPLEAGEPDPPAA+ +
Sbjct: 121 AAEIRDPTRKGIRVWLGTYDSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAASGQ 180

Query: 181 PKRGR-RKWRNVTKALMAMDEK 193
            KRGR +KWRN+ KALMAMDEK
Sbjct: 181 -KRGRGQKWRNIPKALMAMDEK 197

[Close]
BLAST of Lag0019846.1 vs. NCBI nr
Match: KAG6600197.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.4 bits (677), Expect = 3.8e-67
Identity = 142/199 (71.36%), Postives = 154/199 (77.39%), Query Frame = 0 

Query: 1   MASSEEFFTLEVITQFLLGDFADQNQTHFQTDFPFLHHIKLEDFSFDFQIPPPQTPPPPA 60
           MAS EEFF +E ITQFLLGD  D +QTHF+TD  FLH IKLEDF FD QI PP  PP PA
Sbjct: 1   MASLEEFFNIEFITQFLLGDSLD-HQTHFETDSSFLHPIKLEDFFFDSQITPPLPPPVPA 60

Query: 61  EESDNGTKSGVAVDLPTPKTE-------ARHEAAVAGSAGGKGRRHFRGVRRRPWGKFAA 120
           E SDN TKS   V    PKT+        + E AVAG+ G K ++HFRGVRRRPWGKFAA
Sbjct: 61  EGSDNETKSSEVVHPSLPKTDMSGQVCHVKAEDAVAGATGEKVKKHFRGVRRRPWGKFAA 120

Query: 121 EIRDPTRKGTRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAAAEPK 180
           EIRDP RKG+RVWLGTYDSD+DAAKAYDCAAFRLRGRKAILNFPLEAGEPDPP A A  K
Sbjct: 121 EIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPP-AVANSK 180

Query: 181 RGRRKWRNVTKALMAMDEK 193
           RGR+KW NV K LMAM+EK
Sbjct: 181 RGRQKWTNVRKGLMAMNEK 197

[Close]
BLAST of Lag0019846.1 vs. NCBI nr
Match: XP_022922867.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita moschata])

HSP 1 Score: 265.0 bits (676), Expect = 5.0e-67
Identity = 147/202 (72.77%), Postives = 159/202 (78.71%), Query Frame = 0 

Query: 1   MASSEEFFTLEVITQFLLGDFADQNQTHFQTDFPFLHHIKLEDFSFDFQIPPPQTPPPPA 60
           MASSEEF ++E ITQFLL D +D +QTHFQTD PFLH IKLEDF FD  IPP    PPPA
Sbjct: 1   MASSEEFLSIEFITQFLLVDSSD-HQTHFQTDSPFLHSIKLEDFIFDSPIPP---SPPPA 60

Query: 61  EESDNGTKSGVAVDLPTPKTE-------ARHEAAVAG--SAGGKGRRHFRGVRRRPWGKF 120
           E   N TK+G  VD  TPKT+       A  EA+VAG     GKGR HFRGVRRRPWGKF
Sbjct: 61  EGCYNDTKAGEVVDWSTPKTDMSGQASKADAEASVAGKTDTDGKGRSHFRGVRRRPWGKF 120

Query: 121 AAEIRDPTRKGTRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAAAE 180
           AAEIRDPTRKG RVWLGTYDSDIDAAKAYDCAAFRLRGRKA+LNFPLEAGEPDPPAA+ +
Sbjct: 121 AAEIRDPTRKGIRVWLGTYDSDIDAAKAYDCAAFRLRGRKAVLNFPLEAGEPDPPAASGQ 180

Query: 181 PKRGR-RKWRNVTKALMAMDEK 193
            KRGR +KWRN+ KAL AMDEK
Sbjct: 181 -KRGRGQKWRNIPKALKAMDEK 197

[Close]
BLAST of Lag0019846.1 vs. NCBI nr
Match: XP_023550767.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.1 bits (671), Expect = 1.9e-66
Identity = 141/199 (70.85%), Postives = 153/199 (76.88%), Query Frame = 0 

Query: 1   MASSEEFFTLEVITQFLLGDFADQNQTHFQTDFPFLHHIKLEDFSFDFQIPPPQTPPPPA 60
           MAS EEFF +E ITQFLLGD  D +QTHF+TD  FLH IKLEDF FD QI PP  PP PA
Sbjct: 1   MASLEEFFNIEFITQFLLGDSLD-HQTHFETDSSFLHPIKLEDFFFDSQITPPLPPPVPA 60

Query: 61  EESDNGTKSGVAVDLPTPKTE-------ARHEAAVAGSAGGKGRRHFRGVRRRPWGKFAA 120
           E SDN TKS   V    PK +        + E AVAG+ G K ++HFRGVRRRPWGKFAA
Sbjct: 61  EGSDNETKSSEVVHPSLPKPDMSGQVCHVKAEDAVAGTTGEKVKKHFRGVRRRPWGKFAA 120

Query: 121 EIRDPTRKGTRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPPAAAAEPK 180
           EIRDP RKG+RVWLGTYDSD+DAAKAYDCAAFRLRGRKAILNFPLEAGEPDPP A A  K
Sbjct: 121 EIRDPNRKGSRVWLGTYDSDVDAAKAYDCAAFRLRGRKAILNFPLEAGEPDPP-AVANSK 180

Query: 181 RGRRKWRNVTKALMAMDEK 193
           RGR+KW NV K LMAM+EK
Sbjct: 181 RGRQKWTNVRKGLMAMNEK 197

[Close]
BLAST of Lag0019846.1 vs. ExPASy Swiss-Prot
Match: Q9FKG2 (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana OX=3702 GN=ERF107 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.2e-28
Identity = 55/77 (71.43%), Postives = 68/77 (88.31%), Query Frame = 0 

Query: 98  RHFRGVRRRPWGKFAAEIRDPTRKGTRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFP 157
           RH+RGVRRRPWGKFAAEIRDP +KG+R+WLGT++SDIDAA+AYD AAF+LRGRKA+LNFP
Sbjct: 105 RHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164

Query: 158 LEAGEPDPPAAAAEPKR 175
           L+AG+ D P  +   +R
Sbjct: 165 LDAGKYDAPVNSCRKRR 181

[Close]
BLAST of Lag0019846.1 vs. ExPASy Swiss-Prot
Match: Q9LY05 (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 GN=ERF106 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-27
Identity = 84/201 (41.79%), Postives = 104/201 (51.74%), Query Frame = 0 

Query: 1   MASSEEFFTLEVITQFLLGDFADQNQTHFQTDFPFLHHIKLEDFSFDFQI------PPPQ 60
           MAS EE   LE I   LL D    +   F  DF F       D SF   +       P Q
Sbjct: 1   MASFEESSDLEAIQSHLLEDLLVCD--GFMGDFDF-------DASFVSGLWCIEPHVPKQ 60

Query: 61  TPPPPAEESD---------------------NGTKSGVAVDLPTPKTEARHEAAVAGSAG 120
            P  P  + D                     N + S    D    K E   E   A    
Sbjct: 61  EPDSPVLDPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDA---- 120

Query: 121 GKGRRHFRGVRRRPWGKFAAEIRDPTRKGTRVWLGTYDSDIDAAKAYDCAAFRLRGRKAI 175
               RH+RGVRRRPWGKFAAEIRDP +KG+R+WLGT++SD+DAA+AYDCAAF+LRGRKA+
Sbjct: 121 ----RHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAV 180

[Close]
BLAST of Lag0019846.1 vs. ExPASy Swiss-Prot
Match: Q9FKG1 (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana OX=3702 GN=ERF104 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.8e-25
Identity = 75/171 (43.86%), Postives = 95/171 (55.56%), Query Frame = 0 

Query: 1   MASSEEFFTLEVITQFLLGDFADQNQTHFQTDFPFLHHIKLEDF-------SFDFQIPPP 60
           MA+ +E   ++ I+Q LL DF        +TD P L   +L +F       +   Q P P
Sbjct: 1   MATKQEALAIDFISQHLLTDFVS-----METDHPSLFTNQLHNFHSETGPRTITNQSPKP 60

Query: 61  -----QTPPPPAEESDNGTKSGVAVDLPTPKTEARHEAAVAGSAGGKGRRHFRGVRRRPW 120
                Q  PP    S + T S         KTE   E            RH+RGVRRRPW
Sbjct: 61  NSTLNQRKPPLPNLSVSRTVS--------TKTEKEEE-----------ERHYRGVRRRPW 120

Query: 121 GKFAAEIRDPTRKGTRVWLGTYDSDIDAAKAYDCAAFRLRGRKAILNFPLE 160
           GK+AAEIRDP +KG R+WLGTYD+ ++A +AYD AAF+LRGRKAILNFPL+
Sbjct: 121 GKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLD 147

[Close]
BLAST of Lag0019846.1 vs. ExPASy Swiss-Prot
Match: Q40478 (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.4e-25
Identity = 66/144 (45.83%), Postives = 89/144 (61.81%), Query Frame = 0 

Query: 21  FADQNQTHFQTDFPFLHHIKLEDFSFDFQIPPPQTPP-----PPAEESDNGTKSGVAVDL 80
           +AD  Q+       F ++ K E  SF+F+  P  +        P + S    K  + + +
Sbjct: 65  YADTAQSSNLDISSFFNNSKTEFDSFEFETKPNVSAARISSNSPKQTSFKERKPSLNIAI 124

Query: 81  PTPKTEARHEAAVAGSAGGKGRRHFRGVRRRPWGKFAAEIRDPTRKGTRVWLGTYDSDID 140
           P  + E   +  V  +     ++H+RGVR+RPWGKFAAEIRDP RKGTRVWLGT+D+ I+
Sbjct: 125 PMKQQEVVQKVEVVPTE----KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIE 184

Query: 141 AAKAYDCAAFRLRGRKAILNFPLE 160
           AAKAYD AAF+LRG KAI+NFPLE
Sbjct: 185 AAKAYDRAAFKLRGSKAIVNFPLE 204

[Close]
BLAST of Lag0019846.1 vs. ExPASy Swiss-Prot
Match: O80341 (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ERF5 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-24
Identity = 71/155 (45.81%), Postives = 91/155 (58.71%), Query Frame = 0 

Query: 44  FSFDFQIPPPQTPPPPAEESDNG---------TKSGVAVDLPTPKTEARHEAA------V 103
           F FD ++        P+ ++ N           K  + + LP  KTE    AA      V
Sbjct: 86  FEFDSEVSVSDFDFKPSNQNQNQFEPELKSQIRKPPLKISLPA-KTEWIQFAAENTKPEV 145

Query: 104 AGSAGGKGRRHFRGVRRRPWGKFAAEIRDPTRKGTRVWLGTYDSDIDAAKAYDCAAFRLR 163
                 + ++H+RGVR+RPWGKFAAEIRDP ++G+RVWLGT+D+ I+AA+AYD AAFRLR
Sbjct: 146 TKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLR 205

Query: 164 GRKAILNFPLEAGEPDPPAAAAEPKRGRRKWRNVT 184
           G KAILNFPLE G+  P A   E KR R     VT
Sbjct: 206 GSKAILNFPLEVGKWKPRADEGEKKRKRDDDEKVT 239

The following BLAST results are available for this feature:
BLAST of Lag0019846.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038878226.13.7e-7072.86ethylene-responsive transcription factor ERF106-like [Benincasa hispida][more]
KAG6576825.11.0e-6772.77Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
KAG6600197.13.8e-6771.36Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
XP_022922867.15.0e-6772.77ethylene-responsive transcription factor ERF106-like [Cucurbita moschata][more]
XP_023550767.11.9e-6670.85ethylene-responsive transcription factor ERF106-like [Cucurbita pepo subsp. pepo... [more]
BLAST of Lag0019846.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FKG26.2e-2871.43Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LY051.1e-2741.79Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9FKG13.8e-2543.86Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana OX=3702 ... [more]
Q404788.4e-2545.83Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 ... [more]
O803411.9e-2445.81Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 100..111
score: 66.97
coord: 139..159
score: 58.18
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 99..163
e-value: 2.8E-33
score: 126.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 99..149
e-value: 5.2E-14
score: 52.2
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 99..157
score: 23.801672
IPR001471AP2/ERF domainCDDcd00018AP2coord: 107..157
e-value: 1.19984E-20
score: 79.2379
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 98..159
e-value: 1.4E-26
score: 94.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..100
NoneNo IPR availablePANTHERPTHR31677AP2 DOMAIN CLASS TRANSCRIPTION FACTORcoord: 23..171
NoneNo IPR availablePANTHERPTHR31677:SF112DNA BINDING PROTEINcoord: 23..171
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 99..159

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0019846Lag0019846gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0019846.1.exon1Lag0019846.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0019846.1cds.Lag0019846.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0019846.1Lag0019846.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity