Lag0019129.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0019129.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr5: 38917267 .. 38920842 (-)
Sequence length705
RNA-Seq ExpressionLag0019129.1
SyntenyLag0019129.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAAATGGTGTCGCCGTCGACTCCTTCCACCACCATCTTCTCCACCACGAAACGAACGACGGGTTTAATGGGTTTGCAATTAAATGGGTTTTGTTCATTCAAGTCTCTGTGAGTTTAATAGGTTGTGATTTTCTTTACTTTTGTTTCTTATTCTTCTAGGTTTTTTTGCATTTGGGGTTTTTTTTTTCTCTTTGATCTGATTTGGGTTTATAATTTGCATGTCTCTATGAGTTTAATGGGTAGATTTTCTTTACTTTTGTTTCTTCTTCATCTAATTTTTTGCATTTGGGGTTCATTTTTTATTCACCGATTCCAAATTCGCTCAAATTCCGGTAATCGTCCCCTAATTCCACGCCGGAGTGAAATAACAACATTTTTTGAATCGGTGTGCCGTCGATTATCTGGATTTTCTGCTTCAAACTGTGAACCGTCTCTGTTTCATCGATCTCCATGTCTATCTGTTGGCCGGAGAGTTTCACGGTGATCGAAATCTTGTTCGGCGGTGCGATGATTTGATTGAACGAGAGATCGATTCACGAACCTTCTGAGATGAATTGGTAATCCTCCATGTCGAATTGGTAATCCTCCATGTCGAGTCCGTCGACTAATTCAATTTTTTTTCCACTTTTGATTTGTTGGCATGCGCTTCAAACCGACCCGACCCGACCCGATTCTAATCGGGTCGGGTCGGTTTGCTCCTGTCTAAAAACCGAACTATGTTGGGTCGAGTCGGGTTTTGTGGAGAACCGACCTGACCCGTTTTCACCCCTACATTTCAGGACTAATATTTGAACATTTGTCAATTGAACTATGTTCTTACAAGTTAGAAACTATTTATTAAAGGGTTAACAGCAAGAATGACCATTATTAAATGTCCGTTTTAAAAAAGTTTTAAAAAATGGCAATACGACTAATTTTTTAGATAAATGACCAAATCATATTTATCTATTAATAAATCCAAATTATCGATTTACGAAAATAACCCTCAATCAATAAAATAACTAATTTGCTAGAAAAACTCGTATCTTCAAAATAAATTTGAATTCCTTTATTTTAACTTAGATAAATTTAAAATAAACTAAAACAATTTCCTAAAAATCTAACAAAAAATTGACGTGAAATATAAAAAAACAATCTTTATAACCAACAAAATCAAAACCAAATTAAAAATCAACAACAAAAAATAATCTTAAAATCATGAAGTAATTAAAATATAACAAAATTAAAATCAAAATTAAATATGAAAAGTAATATAATTATAGTAGAATTAAGAACCTTCCCAATATATTCCTGAAAACAATATCAACCATTACTTCATCCATCTATTTTTAATAAAGTTTCCTAAATCGTGGGATTCAATATCTACACATACATATTAGGAGACTATTGAAAATTCAAAATTTTCAACATTTTCTCGATAGGATAATTAAAACAATCTCAAATTAAAATCAAAACAACCTCTCTCTCTATATATATATATTTCTATTTAACAAAATCAAAAGGACCTCAAAATGTAGAGTAATTAAAACAATTTTTAAATTCAAATCAAAACAATCTTGAAAATCCTATCGGAGTAATGAAGGTTCAAGTTTTCATCCCCTTCATATATTCTCTCAACTTCTACTTCAAGCATCAAGAACCCAGAGTTAAAAACATCTCTAATTCTTTCTATGAGATCAAAAGTCTCATATCTATGTTCTTTAATTGTTTATTTTATTAATTGGACAATCATGAAAAACAAAAAAAAACACAAATACCTAGTATTTTCTTATTCTTTCCACTTGTAGAGGTTGATGTAGGCGGGGTGCAGCACGAGCATTGACAGGTTAATTTTGAAGGGTCTGAGAGACTTATATTTTTATTTAGGTGGTAATCCTATTTAAATTTCATATTTTGAATCGATCCAAGATATTGAATTTAAAATTGATAAAGTTGATATAAGATTTGGAAAGAGATTTTTTAAAATACATTCTCATGGCTGATTTCGTTGGAGGGGTAAACTCGACAATTTGGACCAAAAAGTTGGTACGTGAAGAACACAAAATGGCCATGGCCATAATTCTAACATTTTTTTCTGTTTATTTTTCAAACCCGCTTTTTTTTTTGGGGAATTGTGCTAAATGGCTACAAAAAATAAGCATTCTTGATTTTTGGCTACGGAAGTTTGGATTTTGCAGGCATGGCTACCGACATTTTAGGGAACTGTTTACTGGATTATTTTGGACATTTTTACCCTTGTATTTACGGTTATTTACAGACGCCGTTTACGTCATTTTCGAGGACAAGATGTGTTTTGGATGGTCAACGAATTTCAAAACGGTACATACAGGGGGTGTTGTGTAGTCGTTGACATCCCGAGTGTCAATACTGGTATACACCCCGTGGGGACAGTTTCAAAGGGAGTAAACTAATCCCTAAAATTTCGGGATTTTAGTATCTGTTTGTTGCAAATATAAGGGGAGGGAAACCAAACCGTTACCTATTTCAATTTTTTTTGGTACACTCGTCGCGTAGGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGCGGCAGATGAAGGTCGTTGGCACGGCGGAGATGGTTCGTCGGCGTGGTATGAGAGGTAGGTAGTGTTATTCACTTTGTTTGGCGGTGGGAAATGGTGTGGAATGGAGGGTTCGGGGGTGTGGAATGCTCTCAAATGGTGTGGAATACTCTCAATGGTTTCTACTTTTGGAGGAAGAAGATGGACGGGTGGGCTGCTGCATGAAGGCTATTCTGGTGGTGAGGGTGGGCAGTGACATGACGTTTTTACCCCTTGTATTTACGGTTATTTACAGACTCCGTTTACGTCATTTCCGAGGACAGAGATGTGTTTTGGATGGTGAACGAATTTCAAAACGGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGAGTGTCAATACTGGTATACACCCCGTGGGGACAGTTTCAAAGGGAGTAAACTAAATCCCTAAAATCTAGGGATTTTAGTATCTGTTTGTTGCAAATATAAGGGGAGGGAAACCAAACCGTTACTTATTTCAATTTTTTTGGTACAGTCGTCGCGTAGGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGTGGCGGATGAAGGTCGTTGGCACGGCGGAGATGGTTCATCGGCGTGGTGTGAGAGGTAGGTAGTGATATTCACTCTGTTTGGCGGTGGGAAATGGTGTGGAATGGAGAGTTCGGGGGTGTGGAATGCTCTCAAGGGTTTCTATTTTGGAGGAAGAAGATGGACGGGTGGGCTGCTGCATGAAGGCTATTCCGGTGGTGAGGGTGGGCGGTGACATGACGTTTTTACCCCTTGTATTTATGGTTATTTACAGACGTCGTTTACGTCATTTCTGAGGACAGAGATGTGTTTTGCAGTATTTAATTGCAATTATTCATTCTGGTGGTGAGGGTGAGAGGTATCTTCTTTTTAGCTTATTCATTTTTTAGAGAAAATTAGTATGTCTTCCGGGTTGCTGGTGTTCTTATTTTTTTGGGTTTTTAATTGCTGATGTTCTTGGGTGCAGGTAG

mRNA sequence

ATGAAACAAATGGTGTCGCCGTCGACTCCTTCCACCACCATCTTCTCCACCACGAAACGAACGACGGGTTTAATGGGTTTGCAATTAAATGGGTTTTGTTCATTCAAGTCTCTGCGGGGTGCAGCACGAGCATTGACAGGCATGGCTACCGACATTTTAGGGAACTGTTTACTGGATTATTTTGGACATTTTTACCCTTGTATTTACGGTTATTTACAGACGCCGTTTACGTCATTTTCGAGGACAAGATGTGTTTTGGATGGTCAACGAATTTCAAAACGGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGCGGCAGATGAAGGTCGTTGGCACGGCGGAGATGGTTCGTCGGCGTGGTATGAGAGACTCCGTTTACGTCATTTCCGAGGACAGAGATGTGTTTTGGATGGTGAACGAATTTCAAAACGGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGAGTGTCAATACTGGTATACACCCCGTGGGGACAGTTTCAAAGGGAGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGTGGCGGATGAAGGTCGTTGGCACGGCGGAGATGGTTCATCGGCGTGGTGTGAGAGGGTTTCTATTTTGGAGGAAGAAGATGGACGGGTGGGCTGCTGCATGAAGGCTATTCCGGTGGTGAGGGTGGGCGGTGACATGACGTAG

Coding sequence (CDS)

ATGAAACAAATGGTGTCGCCGTCGACTCCTTCCACCACCATCTTCTCCACCACGAAACGAACGACGGGTTTAATGGGTTTGCAATTAAATGGGTTTTGTTCATTCAAGTCTCTGCGGGGTGCAGCACGAGCATTGACAGGCATGGCTACCGACATTTTAGGGAACTGTTTACTGGATTATTTTGGACATTTTTACCCTTGTATTTACGGTTATTTACAGACGCCGTTTACGTCATTTTCGAGGACAAGATGTGTTTTGGATGGTCAACGAATTTCAAAACGGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGCGGCAGATGAAGGTCGTTGGCACGGCGGAGATGGTTCGTCGGCGTGGTATGAGAGACTCCGTTTACGTCATTTCCGAGGACAGAGATGTGTTTTGGATGGTGAACGAATTTCAAAACGGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGAGTGTCAATACTGGTATACACCCCGTGGGGACAGTTTCAAAGGGAGGGGAGAAACGACCGAGCATGCAAGAGATGGTTGTCGACGTGGCGGATGAAGGTCGTTGGCACGGCGGAGATGGTTCATCGGCGTGGTGTGAGAGGGTTTCTATTTTGGAGGAAGAAGATGGACGGGTGGGCTGCTGCATGAAGGCTATTCCGGTGGTGAGGGTGGGCGGTGACATGACGTAG

Protein sequence

MKQMVSPSTPSTTIFSTTKRTTGLMGLQLNGFCSFKSLRGAARALTGMATDILGNCLLDYFGHFYPCIYGYLQTPFTSFSRTRCVLDGQRISKRGRNDRACKRWLSTRQMKVVGTAEMVRRRGMRDSVYVISEDRDVFWMVNEFQNGTYRGCCVVVDIPSVNTGIHPVGTVSKGGEKRPSMQEMVVDVADEGRWHGGDGSSAWCERVSILEEEDGRVGCCMKAIPVVRVGGDMT
Homology
The following BLAST results are available for this feature:
BLAST of Lag0019129.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0019129.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0019129.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0019129.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0019129Lag0019129gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0019129.1.exon8Lag0019129.1.exon8exon
Lag0019129.1.exon7Lag0019129.1.exon7exon
Lag0019129.1.exon6Lag0019129.1.exon6exon
Lag0019129.1.exon5Lag0019129.1.exon5exon
Lag0019129.1.exon4Lag0019129.1.exon4exon
Lag0019129.1.exon3Lag0019129.1.exon3exon
Lag0019129.1.exon2Lag0019129.1.exon2exon
Lag0019129.1.exon1Lag0019129.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0019129.1cds.Lag0019129.1_8CDS
cds.Lag0019129.1cds.Lag0019129.1_7CDS
cds.Lag0019129.1cds.Lag0019129.1_6CDS
cds.Lag0019129.1cds.Lag0019129.1_5CDS
cds.Lag0019129.1cds.Lag0019129.1_4CDS
cds.Lag0019129.1cds.Lag0019129.1_3CDS
cds.Lag0019129.1cds.Lag0019129.1_2CDS
cds.Lag0019129.1cds.Lag0019129.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0019129.1Lag0019129.1-proteinpolypeptide