Lag0018172.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0018172.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Description4-hydroxy-tetrahydrodipicolinate synthase
Locationchr5: 17994812 .. 18000582 (-)
Sequence length1485
RNA-Seq ExpressionLag0018172.1
SyntenyLag0018172.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGAACAACTATTGGATGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCTCAAGTAATCCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGCTTCGTCCTAAAAGACTTAATTCTAAAGCTAGCTATGGAAGGAAAAATTGAACTCGACCTTGATGAAGTAGCTGAATCAAATCTTACTACAATCAAAGAAAAGAGCAAGCATCTAAGAAAGAAGGATCCTAAGAAACTTCAACCCAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCGACAACTGGCACTACAAGAAAATACTTTTTCAGTGACAATTTTTTAGTGACGCGACAAAAATAAGCCGCTAAAGATGACTTTCAGTGGCACCATAAACCAAATGTCGCAATTACATATTTTCAGTGATGCGATAAAATTAGATGTCACTAATAGTTTTAGGGACGCATAAATTCGCGTCACAAAAAAAATTATTTTTAGCAACATGTTTATCATGTTGCTAAAAAATGTGTTTGAGCCACTAAAAGTTTTACTTTATTTATCACGTTTTAACATGTAAATTTTTAGGGTTTTTTTTTTATCATCTCCTCTTCCCTCCCTTTTCCCTCAATTCAGCCACGCCTCACTTTCCTTCTCTCCCTCGATTTCTACTGTTAAGGGGAAGTTCGCTGCTCAGGTCACGTACAACGCCGCCCGTTGCCGAATCTCGCCGTCGAAGGTCGTCGCCCACTATCGAATCTCTCCATTGAAGGTCGCGCCGAAGGTCAGTTCGAAGTTCAGTTTTCCCTCTCTCCCTTGAGTTCAGTTCGTCGTCGAATCTCCGTTTCCCTCTCCCTCGAGCTTTGTTCACCGCCAAATCCCATTTTCCCTCTCCTTCAAGTTGAGTTTCGCCGTCGAATCCTGTTTTCCCTCTCTCTTTCGTGCTCAGTTCGCCGCCTGTTTCCCGTCCCCGCCGCCCATCCACGTTGCTTAGTTCGCCGCCGTCCGTCCACGTCGCTCAGGTCATATTTATATTTTACAAAGCATATCATAGATTATAATACTTTATGTTTTTTTTTTTTTAAAAAAAAGATACTGATGGATATGGCACAAAGATTCCAACTTTGACCAAGGAGACTGGTCCTTCAAAGGATGAGTTAGAGCTAGCTAAAGAAATGGAGAGATCTTCCTCAAGGAAGAAGGCGCCTGATCTATATAAAGGCAATCTTTCTAAATCGGAAGCAACTTCACGAATTGGGATGAAAGGGGAAAAAATTGAGGGCTTAGCATCAAATATGAATGGAAATACACAGACAGTAGCCATCAAGACTTTCCTCCATTGGACAAAGGATGTCGTAGGGATTGATTCTGAGTCACCAAATCCATTTGGTTAGACAACTATTGAAGAGAGTACCCAAGTTGAATTTCAACCAAATTGAAATACTCATAACCTTAGTTGCAAGGTGAGTGACTGAGTTTGACTACATTGGATTATAATACTTGATATTAACTTTTGAAACTTTTGCATGTTTACTCTGTTTGAAATGTTTACTCTGTTTGAAACTTTTTTTGAGATGTTTATTGAAATGTTGAGATATCGCCTCTATATTGAGATGTTTACTTTGTTTGAAACTTTTTTTTTTTTTAAAAACTTGATATTAACTTGAAGTAGAAATCTTTATGAACTTGTAGATAAGTGCATCCTTTGTCATTCGCTTAAGTAGAGACTAAAACGATATAGTTGGAAGAGATGATGAATTGTTGTAGTATAGTAGAGCGAAAACTTGAAGTGAATTTGAAAGATATAGTTGATAGAGATGATGAATGGTTGCACTTAATTCTTTTAGTCAGTTTAGTTGGATTCATTGATAGACTTATTTGATACTGTGTCGTTAAATTGAGTTGTTTCATTGCAAAAGGTCTCCATGGTTTGAGTTAAGTGAAAAAGTTTGTGTTGTTATGATAATTAGTTAAGTTTCACTTGTTTTCCATTAAGTTATTATGTTTAGGAAGGTCAATACCTTGTTGCACCTAGTTCTTTTAATGAGTTTAGTTGTTTTCATTGATAAGTTTATTTGGAGCTATATGGTAATTGATAAATTCACTTAGCAAGTAATTGATAATTAATATTACTTATACCTCTCTTGCCTTTTGTATGGCATTGTCTGATATGTCCAATCCAATAACTTGGCGTTTAGAGCCCGACATTTGTACAATATTAGTCACAAAACTTAAGCTGAAATATTAGTCACAAAACTTTGCTCAAGCTATATGGAAAGTCTTGAAGCAGTATAGAGATAAACTAAAGGTAATCATTTACAGATATTTAACTTGCTTCAAGTCTATAATTTCACAATTGTTCTGTTTTGAACTTTTGCTTTATCTGAAAAATATCAATTTCATATTAATTGAACATAATAAAAATATTTTGTTTTGATGTTGGTTTGAAATAAGAGTGCAGAGGATGAAAATCAAAATCTTCGTGAGGAAATTAAGAAGGAAAAGATGAAATATTTTGAGCTAGAAAAGCAATGGGAAAATTCAAGATGTTGTGCTTGCTCCAAGGAAGATTAAGCTGAAGCTGCATCCATCAAAGTAGTTCCAAGTTTTGAGATAAGAAGTGGTTTGGATGAGCACAAATCAAATGATGGTCATGAGGTGTGCTTGCAGAATTTTTCTTCCCTCTTGCTTCTTTTAGTATTTTATGATTATGATGACATGGTGACATATTTGTAGTTATTAATGTTCATGTTTCTGGCTTGTTGATTTAATTTAGCTGGCGGCAAGACAGATGCTTTATTCAAATTATACTTGGAAAAGCTAATCGATTATGACTTTGATTCTATGCTCAGATAAATGTGACCTCTTTCATCAAAGTGAAGGAATCCGATGGTTCCTCTCCCTGTAAAGACATAACTTTATGTACCCTATTTAGGATCTATTTTGTTTTTGTCTCTCTTTATCAATCTTCAAATTCGACCTTAGTCAATCATTAGATCTCAACTTCATCAAACTTACTGCAACTAAGATCAAGAAATGTTTTGTTGTTTACTGTTGCAAGTTAGTTCTTGAAATTTGCAAATCAAGTATTTTTACCTCTCTAATCTTTGCGAAGTTGAGTTGGAGTAAAGTCGAGGACTATTATAGACTCCGTGACATTTAAGGAATATAACATCTTCTATATGTGAATCTAAGGGCTAATGAATCCATGACTATTTGGTTGGTGTTGGGGGACTTTACCCTTACATTGTGGTTTTCTAAATTCTAAAATTTCTTAGTATATTTGTCATCACTGGATATTTATTGTATTTTAAGTCCAACAGGTTCTTTGAATTCCAATGGGCAATGGGTTAAACTTGTTGATAATAATTATAGATTCACTAGACTGGATGTGTATATGAACTGTATTTCATTAAAAGATCGGTATTGCATTATATGGAAAGATTTGTGCTCAAATCATTTGGTGAGAAACATGGAATCCATGAGGAAATTCTAGTTGTTGCTTTCTGTTTTCTCCAGTTCATAATAGTAGTTCTATTAAGATCATTTTTCATCACATAGCTCAAGTTTCCTCAATTGGTGGATATAAGGTAACAAAAGATGTAAGATTTTTTTTTTTTTTTTGGCAAGCTTTCTCACTGATTAGATATAATGTAACAATTGATTGTTCTTCATTCACTATCACAGTCTGAGGAAGACTTAAATGACAAACTTCGCTCAATCCCCCCCTCTCTGTCTCTCGATACTAGCAATTTAACAATGTGATAGTGTTGAATGGTTTCTTGACTGTAGAATATTTATTGTCGTTGAGATATAATGTGGTTTCAGTTAGAAAGCTGTTTGAAGATGAGAACATAAGTTTTTGGACAATCATTGATGGGCTTAATTCCTCCAACTTTTATTTGCAGGACATCAGCAGATGATATCAAGTCTCTTAGACTTGTAACTGCCATTAAAACACCATATCTTCCCGATGGTAGATTTGATATAGAAGCTTATGATGCCTTGGTGAACTGTCAGATTGAAAATGGAGCTAAAGGTGTGATTGTGGGTGGCACAATTGGTGAAGGTCAGTTGATGAGCTGGGATGAACACATAATGCTTATTGGTCACACTGTCAACTGTTTTGGTGGATCAGTCAAGGTAATAGGCAACACAACATGCTTCTAAGTAGGGATTTGCCGTTGGAATGCATGCTGCTCTTCATATAAATTGCTTTGAATGTAGGGGTGGGTTTGAATGTAGGGGGTGGGTTGTTGCTTCGAGATTAAATTATTCATAAGTTTAAGTTTACTTACTTTTGTGGTTGTTTAGCTTAGTTTGTTTTGATAATTTTGGTTGTTTAGCTTAGTTTTTTTGATAGCTTTTAATGAGTTGTTTATCAATTATTTAATCTCAAGCTTACATATTTTATTTTCTTTTATTTTTCAGCTTGGATGCATGAATGGTTTCGACAAGGCTCCCCCTTTTTTGTATGAAAATGTGAAGAACGTAGGTTGGTTTTTTTTGTTTGTGATCTTTTGTTAGTTATTTTGATGCGCTGTGAATCATTTTGTTAAGCAAACTTCTTCACCTAGACTTGAGATCATTTTAGAAAATGATCAATTTGTATTACATTCTAGACATGTTTCTTAATTATGGTTAATATGAGGTAGTGCATTTTAACTTTAAATTGGCATATTATATTTTTTATTTGATTAATTGTAGAATTGTTAATTAGTTTGAAGATGGTTATATTATTTTATTTACAGGTTTACTAATTGAATTAACTATTTATTTTTTTTAAATCATAAACAATATTCTTTGACGTGTGTACTGCGTCACTGAACATAAGATTTTAGTGACGTGCTGGCAATGTCACTGAATATATTTTTCAGCGACAACCGGTCGGATGTTGCTGAAAGTATACGGTTTTAGTGACGTGCTAACAATGTCACTGAACATCTTTTTCAGCGACAATGGGTCGGACGTTGCTGAAAGTGATCTTCAGTGACGTGTCCCCACGTCCCTACCTATCGCTTACACCGGCGTGTAGACGTCACTGAAGATGACTTTCAGCAACGTCTACAGTAGTATGTCGCAAATACATACGACTACGTAAATACAGCGACGGATGCAACGACAAAGCTACGCGCGCCGCTGAAAGTTTTACCGATGCGTTTTTTGTTTCAGCGACATGTTTTATACACCACTGAAAGTGTTTTTTCTTGTAGTGTGGTGATGTTGAATAAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGGAAACTTTGCAACTTTCTACTGCATCGACGTAGAAGAAGTTGACAATTCTGAGAAGGGTGAACAAAGGACCCCTGTCTTCGGTCGCATCAAGCCTCCAACTACTCATTTGGTGTCCACCTTCACTCGACCTTTAGCTTTCCAAAGGTTAAGTGTCTCCACATCGAAGAAATGTCGATCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAACGATCTGTAACGGGGAGGGAGGGAGGGACCTCCTCCCTCCGTTCCGACGCCGGAAAACGGAGGAGGGAGCTCCCTCCTCCTTTCTCTTTCATTTAAAAAAAAAGTTGTTGAAACTTTGAGGAAGGAGAGGAAGAAGAGAAGAAGAAGGAAGAAAGAAAGAAAGAAAGAAAAACAAATTTCGCCGCCGACGAGCGGCGGCCGGCGGCTGCCGGCGACGACATGTGGGTGGCGCGACCATCGGAGGTTTGAAGAAGAAGATGGAGGGGATGAGGGAAGAGGATGA

mRNA sequence

ATGTTGGAACAACTATTGGATGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCTCAACCACGCCTCACTTTCCTTCTCTCCCTCGATTTCTACTGTTAAGGGGAAGTTCGCTGCTCAGGTCACGTACAACGCCGCCCGTTGCCGAATCTCGCCGTCGAAGGTCGTCGCCCACTATCGAATCTCTCCATTGAAGGTCGCGCCGAAGGTCAGTTCGAATTCGCCGCCTGTTTCCCGTCCCCGCCGCCCATCCACGTTGCTTAGTTCGCCGCCGTCCGTCCACGTCGCTCAGATTCCAACTTTGACCAAGGAGACTGGTCCTTCAAAGGATGAGTTAGAGCTAGCTAAAGAAATGGAGAGATCTTCCTCAAGGAAGAAGGCGCCTGATCTATATAAAGGCAATCTTTCTAAATCGGAAGCAACTTCACGAATTGGGATGAAAGGGGAAAAAATTGAGGGCTTAGCATCAAATATGAATGGAAATACACAGACAGTAGCCATCAAGACTTTCCTCCATTGGACAAAGGATGTCGTAGGGATTGATTCTGAGTCACCAAATCCATTTGATAAATGTGACCTCTTTCATCAAAGTGAAGGAATCCGATGGTTCCTCTCCCTGACATCAGCAGATGATATCAAGTCTCTTAGACTTGTAACTGCCATTAAAACACCATATCTTCCCGATGGTAGATTTGATATAGAAGCTTATGATGCCTTGGTGAACTGTCAGATTGAAAATGGAGCTAAAGGTGTGATTGTGGGTGGCACAATTGGTGAAGGTCAGTTGATGAGCTGGGATGAACACATAATGCTTATTGGTCACACTGTCAACTGTTTTGGTGGATCAGTCAAGCTTGGATGCATGAATGGTTTCGACAAGGCTCCCCCTTTTTTGTATGAAAATGTGAAGAACGTAGTGACGTGTCCCCACGTCCCTACCTATCGCTTACACCGGCGTGTAGACGTCACTGAAGATGACTTTCAGCAACGTCTACAGTATGTGGTGATGTTGAATAAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGGAAACTTTGCAACTTTCTACTGCATCGACGTAGAAGAAGTTGACAATTCTGAGAAGGGTGAACAAAGGACCCCTGTCTTCGGTCGCATCAAGCCTCCAACTACTCATTTGGTGTCCACCTTCACTCGACCTTTAGCTTTCCAAAGGGAGGGACCTCCTCCCTCCGTTCCGACGCCGGAAAACGGAGGAGGGAGCTCCCTCCTCCTTTCTCTTTCATTTAAAAAAAAAGTTGTTGAAACTTTGAGGAAGGAGAGGAAGAAGAGAAGAAGAAGGAAGAAAGAAAGAAAGAAAGAAAAACAAATTTCGCCGCCGACGAGCGGCGGCCGGCGGCTGCCGGCGACGACATGTGGGTGGCGCGACCATCGGAGGTTTGAAGAAGAAGATGGAGGGGATGAGGGAAGAGGATGA

Coding sequence (CDS)

ATGTTGGAACAACTATTGGATGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCTCAACCACGCCTCACTTTCCTTCTCTCCCTCGATTTCTACTGTTAAGGGGAAGTTCGCTGCTCAGGTCACGTACAACGCCGCCCGTTGCCGAATCTCGCCGTCGAAGGTCGTCGCCCACTATCGAATCTCTCCATTGAAGGTCGCGCCGAAGGTCAGTTCGAATTCGCCGCCTGTTTCCCGTCCCCGCCGCCCATCCACGTTGCTTAGTTCGCCGCCGTCCGTCCACGTCGCTCAGATTCCAACTTTGACCAAGGAGACTGGTCCTTCAAAGGATGAGTTAGAGCTAGCTAAAGAAATGGAGAGATCTTCCTCAAGGAAGAAGGCGCCTGATCTATATAAAGGCAATCTTTCTAAATCGGAAGCAACTTCACGAATTGGGATGAAAGGGGAAAAAATTGAGGGCTTAGCATCAAATATGAATGGAAATACACAGACAGTAGCCATCAAGACTTTCCTCCATTGGACAAAGGATGTCGTAGGGATTGATTCTGAGTCACCAAATCCATTTGATAAATGTGACCTCTTTCATCAAAGTGAAGGAATCCGATGGTTCCTCTCCCTGACATCAGCAGATGATATCAAGTCTCTTAGACTTGTAACTGCCATTAAAACACCATATCTTCCCGATGGTAGATTTGATATAGAAGCTTATGATGCCTTGGTGAACTGTCAGATTGAAAATGGAGCTAAAGGTGTGATTGTGGGTGGCACAATTGGTGAAGGTCAGTTGATGAGCTGGGATGAACACATAATGCTTATTGGTCACACTGTCAACTGTTTTGGTGGATCAGTCAAGCTTGGATGCATGAATGGTTTCGACAAGGCTCCCCCTTTTTTGTATGAAAATGTGAAGAACGTAGTGACGTGTCCCCACGTCCCTACCTATCGCTTACACCGGCGTGTAGACGTCACTGAAGATGACTTTCAGCAACGTCTACAGTATGTGGTGATGTTGAATAAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGGAAACTTTGCAACTTTCTACTGCATCGACGTAGAAGAAGTTGACAATTCTGAGAAGGGTGAACAAAGGACCCCTGTCTTCGGTCGCATCAAGCCTCCAACTACTCATTTGGTGTCCACCTTCACTCGACCTTTAGCTTTCCAAAGGGAGGGACCTCCTCCCTCCGTTCCGACGCCGGAAAACGGAGGAGGGAGCTCCCTCCTCCTTTCTCTTTCATTTAAAAAAAAAGTTGTTGAAACTTTGAGGAAGGAGAGGAAGAAGAGAAGAAGAAGGAAGAAAGAAAGAAAGAAAGAAAAACAAATTTCGCCGCCGACGAGCGGCGGCCGGCGGCTGCCGGCGACGACATGTGGGTGGCGCGACCATCGGAGGTTTGAAGAAGAAGATGGAGGGGATGAGGGAAGAGGATGA

Protein sequence

MLEQLLDAQLIELPKCKRPEEMEKVDDLNHASLSFSPSISTVKGKFAAQVTYNAARCRISPSKVVAHYRISPLKVAPKVSSNSPPVSRPRRPSTLLSSPPSVHVAQIPTLTKETGPSKDELELAKEMERSSSRKKAPDLYKGNLSKSEATSRIGMKGEKIEGLASNMNGNTQTVAIKTFLHWTKDVVGIDSESPNPFDKCDLFHQSEGIRWFLSLTSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWDEHIMLIGHTVNCFGGSVKLGCMNGFDKAPPFLYENVKNVVTCPHVPTYRLHRRVDVTEDDFQQRLQYVVMLNKFFSKTFHKKEKGNFATFYCIDVEEVDNSEKGEQRTPVFGRIKPPTTHLVSTFTRPLAFQREGPPPSVPTPENGGGSSLLLSLSFKKKVVETLRKERKKRRRRKKERKKEKQISPPTSGGRRLPATTCGWRDHRRFEEEDGGDEGRG
Homology
[Close]
BLAST of Lag0018172.1 vs. NCBI nr
Match: XP_022147065.1 (4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like [Momordica charantia])

HSP 1 Score: 157.9 bits (398), Expect = 2.2e-34
Identity = 73/79 (92.41%), Postives = 77/79 (97.47%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA+GVIVGGT GEGQLMSWD
Sbjct: 62  TSADDIKSLRLVTAIKTPYLPDGRFDLEAYDALVNLQIENGAEGVIVGGTTGEGQLMSWD 121

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFGGS+K+
Sbjct: 122 EHIMLIGHTVNCFGGSIKV 140

[Close]
BLAST of Lag0018172.1 vs. NCBI nr
Match: XP_038898920.1 (4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 156.4 bits (394), Expect = 6.5e-34
Identity = 73/79 (92.41%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA GVIVGGT GEGQLMSWD
Sbjct: 62  TSADDIKSLRLVTAIKTPYLPDGRFDLEAYDALVNRQIENGADGVIVGGTTGEGQLMSWD 121

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFGGS+K+
Sbjct: 122 EHIMLIGHTVNCFGGSIKV 140

[Close]
BLAST of Lag0018172.1 vs. NCBI nr
Match: XP_023528690.1 (4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 154.8 bits (390), Expect = 1.9e-33
Identity = 72/79 (91.14%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA+ VIVGGT GEGQLMSWD
Sbjct: 60  TSADDIKSLRLVTAIKTPYLPDGRFDLEAYDALVNRQIENGAEAVIVGGTTGEGQLMSWD 119

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFGGS+K+
Sbjct: 120 EHIMLIGHTVNCFGGSIKV 138

[Close]
BLAST of Lag0018172.1 vs. NCBI nr
Match: KAG6582569.1 (4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 154.8 bits (390), Expect = 1.9e-33
Identity = 72/79 (91.14%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA+ VIVGGT GEGQLMSWD
Sbjct: 60  TSADDIKSLRLVTAIKTPYLPDGRFDLEAYDALVNRQIENGAEAVIVGGTTGEGQLMSWD 119

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFGGS+K+
Sbjct: 120 EHIMLIGHTVNCFGGSIKV 138

[Close]
BLAST of Lag0018172.1 vs. NCBI nr
Match: KAG8475065.1 (hypothetical protein CXB51_031830 [Gossypium anomalum])

HSP 1 Score: 154.8 bits (390), Expect = 1.9e-33
Identity = 71/82 (86.59%), Postives = 78/82 (95.12%), Query Frame = 0 

Query: 213 LSLTSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLM 272
           LS TS++DIK+LRL+TAIKTPYLPDGRFD+EAYD LVN QIENGA+GVIVGGT GEGQLM
Sbjct: 77  LSRTSSEDIKALRLITAIKTPYLPDGRFDLEAYDGLVNMQIENGAEGVIVGGTTGEGQLM 136

Query: 273 SWDEHIMLIGHTVNCFGGSVKL 295
           SWDEHIMLIGHTVNCFGGSVK+
Sbjct: 137 SWDEHIMLIGHTVNCFGGSVKV 158

[Close]
BLAST of Lag0018172.1 vs. ExPASy Swiss-Prot
Match: Q42948 (4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=DHPS1 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-35
Identity = 69/79 (87.34%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           T ADDIK+LRL+TAIKTPYLPDGRFD+EAYD LVN QIENGA+GVIVGGT GEGQLMSWD
Sbjct: 52  TFADDIKALRLITAIKTPYLPDGRFDLEAYDTLVNLQIENGAEGVIVGGTTGEGQLMSWD 111

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFGGS+K+
Sbjct: 112 EHIMLIGHTVNCFGGSIKV 130

[Close]
BLAST of Lag0018172.1 vs. ExPASy Swiss-Prot
Match: Q9FVC8 (4-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DHDPS2 PE=1 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 1.4e-34
Identity = 66/79 (83.54%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           T+ DDIK+LR++TAIKTPYLPDGRFD+EAYD LVN QI+NGA+GVIVGGT GEGQLMSWD
Sbjct: 58  TNTDDIKALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWD 117

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFGGS+K+
Sbjct: 118 EHIMLIGHTVNCFGGSIKV 136

[Close]
BLAST of Lag0018172.1 vs. ExPASy Swiss-Prot
Match: Q9LZX6 (4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DHDPS1 PE=1 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 5.2e-34
Identity = 65/79 (82.28%), Postives = 74/79 (93.67%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           T+ DDI+SLR++TAIKTPYLPDGRFD++AYD LVN QIENGA+GVIVGGT GEGQLMSWD
Sbjct: 58  TNTDDIRSLRVITAIKTPYLPDGRFDLQAYDDLVNTQIENGAEGVIVGGTTGEGQLMSWD 117

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFGG +K+
Sbjct: 118 EHIMLIGHTVNCFGGRIKV 136

[Close]
BLAST of Lag0018172.1 vs. ExPASy Swiss-Prot
Match: Q39535 (4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic OS=Coix lacryma-jobi OX=4505 GN=DAPA PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 7.4e-33
Identity = 63/79 (79.75%), Postives = 71/79 (89.87%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           TS DDI SLRL+TA+KTPYLPDGRFD+EAYD+L+N QIE GA+GVIVGGT GEG LMSWD
Sbjct: 70  TSTDDITSLRLITAVKTPYLPDGRFDLEAYDSLINMQIEGGAEGVIVGGTTGEGHLMSWD 129

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFG  +K+
Sbjct: 130 EHIMLIGHTVNCFGSRIKV 148

[Close]
BLAST of Lag0018172.1 vs. ExPASy Swiss-Prot
Match: P24846 (4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic OS=Triticum aestivum OX=4565 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.2e-32
Identity = 62/79 (78.48%), Postives = 71/79 (89.87%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           TS D IKSLRL+TA+KTPYLPDGRFD+EAYD+L+N QI  GA+GVIVGGT GEG LMSWD
Sbjct: 81  TSTDGIKSLRLITAVKTPYLPDGRFDLEAYDSLINTQINGGAEGVIVGGTTGEGHLMSWD 140

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFG ++K+
Sbjct: 141 EHIMLIGHTVNCFGANIKV 159

[Close]
BLAST of Lag0018172.1 vs. ExPASy TrEMBL
Match: A0A6J1CZ39 (4-hydroxy-tetrahydrodipicolinate synthase OS=Momordica charantia OX=3673 GN=LOC111016093 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-34
Identity = 73/79 (92.41%), Postives = 77/79 (97.47%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA+GVIVGGT GEGQLMSWD
Sbjct: 62  TSADDIKSLRLVTAIKTPYLPDGRFDLEAYDALVNLQIENGAEGVIVGGTTGEGQLMSWD 121

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFGGS+K+
Sbjct: 122 EHIMLIGHTVNCFGGSIKV 140

[Close]
BLAST of Lag0018172.1 vs. ExPASy TrEMBL
Match: A0A6J1IVZ1 (4-hydroxy-tetrahydrodipicolinate synthase OS=Cucurbita maxima OX=3661 GN=LOC111479730 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 9.1e-34
Identity = 72/79 (91.14%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA+ VIVGGT GEGQLMSWD
Sbjct: 60  TSADDIKSLRLVTAIKTPYLPDGRFDLEAYDALVNRQIENGAEAVIVGGTTGEGQLMSWD 119

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFGGS+K+
Sbjct: 120 EHIMLIGHTVNCFGGSIKV 138

[Close]
BLAST of Lag0018172.1 vs. ExPASy TrEMBL
Match: A0A6J1E8W7 (4-hydroxy-tetrahydrodipicolinate synthase OS=Cucurbita moschata OX=3662 GN=LOC111431867 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 9.1e-34
Identity = 72/79 (91.14%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           TSADDIKSLRLVTAIKTPYLPDGRFD+EAYDALVN QIENGA+ VIVGGT GEGQLMSWD
Sbjct: 60  TSADDIKSLRLVTAIKTPYLPDGRFDLEAYDALVNRQIENGAEAVIVGGTTGEGQLMSWD 119

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFGGS+K+
Sbjct: 120 EHIMLIGHTVNCFGGSIKV 138

[Close]
BLAST of Lag0018172.1 vs. ExPASy TrEMBL
Match: M5X0A9 (4-hydroxy-tetrahydrodipicolinate synthase OS=Prunus persica OX=3760 GN=PRUPE_2G147200 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-33
Identity = 69/79 (87.34%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           TS DDIKSLRL+TAIKTPYLPDGRFD+EAYDALVN QIENGA+GVIVGGT GEGQLMSWD
Sbjct: 58  TSVDDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIENGAEGVIVGGTTGEGQLMSWD 117

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHT+NC+GGS+K+
Sbjct: 118 EHIMLIGHTINCYGGSIKV 136

[Close]
BLAST of Lag0018172.1 vs. ExPASy TrEMBL
Match: A0A314YPG9 (4-hydroxy-tetrahydrodipicolinate synthase OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_40780 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-33
Identity = 69/79 (87.34%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           TS DDIKSLRL+TAIKTPYLPDGRFD+EAYDALVN QIENGA+GVIVGGT GEGQLMSWD
Sbjct: 58  TSVDDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIENGAEGVIVGGTTGEGQLMSWD 117

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHT+NC+GGS+K+
Sbjct: 118 EHIMLIGHTINCYGGSIKV 136

[Close]
BLAST of Lag0018172.1 vs. TAIR 10
Match: AT2G45440.1 (dihydrodipicolinate synthase )

HSP 1 Score: 149.1 bits (375), Expect = 9.6e-36
Identity = 66/79 (83.54%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           T+ DDIK+LR++TAIKTPYLPDGRFD+EAYD LVN QI+NGA+GVIVGGT GEGQLMSWD
Sbjct: 58  TNTDDIKALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWD 117

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFGGS+K+
Sbjct: 118 EHIMLIGHTVNCFGGSIKV 136

[Close]
BLAST of Lag0018172.1 vs. TAIR 10
Match: AT3G60880.1 (dihydrodipicolinate synthase 1 )

HSP 1 Score: 147.1 bits (370), Expect = 3.7e-35
Identity = 65/79 (82.28%), Postives = 74/79 (93.67%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           T+ DDI+SLR++TAIKTPYLPDGRFD++AYD LVN QIENGA+GVIVGGT GEGQLMSWD
Sbjct: 57  TNTDDIRSLRVITAIKTPYLPDGRFDLQAYDDLVNTQIENGAEGVIVGGTTGEGQLMSWD 116

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFGG +K+
Sbjct: 117 EHIMLIGHTVNCFGGRIKV 135

[Close]
BLAST of Lag0018172.1 vs. TAIR 10
Match: AT3G60880.2 (dihydrodipicolinate synthase 1 )

HSP 1 Score: 147.1 bits (370), Expect = 3.7e-35
Identity = 65/79 (82.28%), Postives = 74/79 (93.67%), Query Frame = 0 

Query: 216 TSADDIKSLRLVTAIKTPYLPDGRFDIEAYDALVNCQIENGAKGVIVGGTIGEGQLMSWD 275
           T+ DDI+SLR++TAIKTPYLPDGRFD++AYD LVN QIENGA+GVIVGGT GEGQLMSWD
Sbjct: 58  TNTDDIRSLRVITAIKTPYLPDGRFDLQAYDDLVNTQIENGAEGVIVGGTTGEGQLMSWD 117

Query: 276 EHIMLIGHTVNCFGGSVKL 295
           EHIMLIGHTVNCFGG +K+
Sbjct: 118 EHIMLIGHTVNCFGGRIKV 136

The following BLAST results are available for this feature:
BLAST of Lag0018172.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022147065.12.2e-3492.414-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like [Momordica charant... [more]
XP_038898920.16.5e-3492.414-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like [Benincasa hispida... [more]
XP_023528690.11.9e-3391.144-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like [Cucurbita pepo su... [more]
KAG6582569.11.9e-3391.144-hydroxy-tetrahydrodipicolinate synthase, chloroplastic, partial [Cucurbita arg... [more]
KAG8475065.11.9e-3386.59hypothetical protein CXB51_031830 [Gossypium anomalum][more]
BLAST of Lag0018172.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q429481.2e-3587.344-hydroxy-tetrahydrodipicolinate synthase, chloroplastic OS=Nicotiana tabacum OX... [more]
Q9FVC81.4e-3483.544-hydroxy-tetrahydrodipicolinate synthase 2, chloroplastic OS=Arabidopsis thalia... [more]
Q9LZX65.2e-3482.284-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic OS=Arabidopsis thalia... [more]
Q395357.4e-3379.754-hydroxy-tetrahydrodipicolinate synthase, chloroplastic OS=Coix lacryma-jobi OX... [more]
P248462.2e-3278.484-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic OS=Triticum aestivum ... [more]
BLAST of Lag0018172.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CZ391.1e-3492.414-hydroxy-tetrahydrodipicolinate synthase OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A6J1IVZ19.1e-3491.144-hydroxy-tetrahydrodipicolinate synthase OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A6J1E8W79.1e-3491.144-hydroxy-tetrahydrodipicolinate synthase OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
M5X0A91.2e-3387.344-hydroxy-tetrahydrodipicolinate synthase OS=Prunus persica OX=3760 GN=PRUPE_2G1... [more]
A0A314YPG91.2e-3387.344-hydroxy-tetrahydrodipicolinate synthase OS=Prunus yedoensis var. nudiflora OX=... [more]
BLAST of Lag0018172.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G45440.19.6e-3683.54dihydrodipicolinate synthase [more]
AT3G60880.13.7e-3582.28dihydrodipicolinate synthase 1 [more]
AT3G60880.23.7e-3582.28dihydrodipicolinate synthase 1 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 437..457
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..494
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 474..494
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..143
NoneNo IPR availablePANTHERPTHR12128:SF594-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE, CHLOROPLASTICcoord: 216..296
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 227..294
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 217..299
e-value: 1.6E-16
score: 62.1
IPR002220DapA-likePFAMPF00701DHDPScoord: 224..294
e-value: 1.2E-18
score: 66.9
IPR002220DapA-likePANTHERPTHR12128DIHYDRODIPICOLINATE SYNTHASEcoord: 216..296

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0018172Lag0018172gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0018172.1.exon10Lag0018172.1.exon10exon
Lag0018172.1.exon9Lag0018172.1.exon9exon
Lag0018172.1.exon8Lag0018172.1.exon8exon
Lag0018172.1.exon7Lag0018172.1.exon7exon
Lag0018172.1.exon6Lag0018172.1.exon6exon
Lag0018172.1.exon5Lag0018172.1.exon5exon
Lag0018172.1.exon4Lag0018172.1.exon4exon
Lag0018172.1.exon3Lag0018172.1.exon3exon
Lag0018172.1.exon2Lag0018172.1.exon2exon
Lag0018172.1.exon1Lag0018172.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0018172.1cds.Lag0018172.1_10CDS
cds.Lag0018172.1cds.Lag0018172.1_9CDS
cds.Lag0018172.1cds.Lag0018172.1_8CDS
cds.Lag0018172.1cds.Lag0018172.1_7CDS
cds.Lag0018172.1cds.Lag0018172.1_6CDS
cds.Lag0018172.1cds.Lag0018172.1_5CDS
cds.Lag0018172.1cds.Lag0018172.1_4CDS
cds.Lag0018172.1cds.Lag0018172.1_3CDS
cds.Lag0018172.1cds.Lag0018172.1_2CDS
cds.Lag0018172.1cds.Lag0018172.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0018172.1Lag0018172.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019877 diaminopimelate biosynthetic process
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016829 lyase activity
molecular_function GO:0008840 4-hydroxy-tetrahydrodipicolinate synthase activity