Lag0017150.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017150.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ganglioside-induced differentiation-associated protein 2
Location	chr5: 581586 .. 583336 (-)
Sequence length	606
RNA-Seq Expression	Lag0017150.1
Synteny	Lag0017150.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGCTCTTGTTCAGCCTCCTCCGCCGGAGCAAAACCTACTCGAAAAGCTCGATGTCTTCAAGATCAAAGGCAGAGACAAGCAGGGCCGCCGGATTCTCCGCATCATCGGAAAATTCTTTCCAGGTTTTTTATCTCTCTCTCTCTCTCTCTCTTTCTTTTGAAATTGACCATTGAACATCCGCATATTTGCGCTACTGTGCTGTGATTCTGTTTTTTCTTGCTCTTTTCAACGATGAAATTGAATTTGAATGTGCTCGAGAAGATTCTGTATGTTTTCCCTAATCTGCTCTGGATTCTGATTCAATTTTCTTGCTCTTTTCGTCGATGAAATTGAATTTTCATCACCATCCGCGCGCACTGTGAGTTTGAATGTGTTCAGAAGCAAGCAACTACGTATTTGCCCTAATCTGGCTTGGATTTTTGTTTTCTTGCTCTTTTCGAGTTTTGGACTGCATATTTGCAGTTTTATGCTTCGATTCTGATTTCTTGCTGTTTTAATTGGTGAGATTGAATTTTCGTAATCTTTTTTGAAAATCAGCGCGGACTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTTCCTAGGCTGAAGAACAAGCGTTTTACGATCTTGTACTTCCACACCGGCGTTCAAAGGAGCCAAAATTTCCCTGGAATCGCCGCCCTCCGATCAATCTATGACGCAATTCCGGCCGCCGTGAAGGCTAATCTGGAAGCCGTGTATTTCGTTCATCCGGACCTCCAGGCCAGGCTCTTCCTCGCCACTCTCGGCCGCATTTTCTTCACCAGCGAGTACTATTTTCTAACCTTTCTCCTTCAATCATTCTCAGTTTTCCCTAATATTCTTATTCTTCTTTTTTAATTAATATTCTTTTCTCAATATTCTTGAATATGGTAATCAATTTCAGATGTGGGAATCTCCCAGCCCACAACTCAAAAAAAAAAAAAAAAAAGTAAAATATATAATTTTAAAATATATTGAATAAGTCAATAATTTATTAGACACAAAATTAGAATTTGAAGGGCCAATTGGACATAAAAGTAAAAGTTTAAGATCTATTAGATATTTTTTAAAGTTCAAAATCTATTAGACACAAAATGAAAATCTATTTGACATTTTTTCAGAGTTTAGAGACTAAACTTATATGTATATATAATTTTGTATCTATATCTTTTTTTTTCTTTGTTATACAATAATTTTTGTTTCTTAGAGCGAGAATTAGATTAAATTATAAGTTTAGTCCTTAACTAATATTCGGATAAATCTCATAATTGTGTTCAATATTGTAATTTAATAATCTTTGACATTTACTAAAGTTCTTTGTTAGGCCTAACATTATTTATTAACAAAAGAAGCTTTAAAAATCAATAAATTAAAGTATGAGATAGAAACTAACATTATTAAAGTTAAAGGAATGAAATTGACATAAAGGAAAAAAAAAAAGGTAGGAATAATTTAACATGTTATATAATTTGATTTTAGTATTTTTGTTTAATGAGAGGGAATGTTTGGATGTGGTAGGGTGTACGGGAAGGTGAGGTACGTGAGCAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATATACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCTCGAGAGCGACCATCCTAGGGTCTACGGTGCACCCTCGATGGAGTCGCACGTGTACTCCATGAGGTGCATTTCCTAG

mRNA sequence

ATGTCCGCTCTTGTTCAGCCTCCTCCGCCGGAGCAAAACCTACTCGAAAAGCTCGATGTCTTCAAGATCAAAGGCAGAGACAAGCAGGGCCGCCGGATTCTCCGCATCATCGGAAAATTCTTTCCAGCGCGGACTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTTCCTAGGCTGAAGAACAAGCGTTTTACGATCTTGTACTTCCACACCGGCGTTCAAAGGAGCCAAAATTTCCCTGGAATCGCCGCCCTCCGATCAATCTATGACGCAATTCCGGCCGCCGTGAAGGCTAATCTGGAAGCCGTGTATTTCGTTCATCCGGACCTCCAGGCCAGGCTCTTCCTCGCCACTCTCGGCCGCATTTTCTTCACCAGCGAGGTGTACGGGAAGGTGAGGTACGTGAGCAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATATACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCTCGAGAGCGACCATCCTAGGGTCTACGGTGCACCCTCGATGGAGTCGCACGTGTACTCCATGAGGTGCATTTCCTAG

Coding sequence (CDS)

ATGTCCGCTCTTGTTCAGCCTCCTCCGCCGGAGCAAAACCTACTCGAAAAGCTCGATGTCTTCAAGATCAAAGGCAGAGACAAGCAGGGCCGCCGGATTCTCCGCATCATCGGAAAATTCTTTCCAGCGCGGACTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTTCCTAGGCTGAAGAACAAGCGTTTTACGATCTTGTACTTCCACACCGGCGTTCAAAGGAGCCAAAATTTCCCTGGAATCGCCGCCCTCCGATCAATCTATGACGCAATTCCGGCCGCCGTGAAGGCTAATCTGGAAGCCGTGTATTTCGTTCATCCGGACCTCCAGGCCAGGCTCTTCCTCGCCACTCTCGGCCGCATTTTCTTCACCAGCGAGGTGTACGGGAAGGTGAGGTACGTGAGCAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATATACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCTCGAGAGCGACCATCCTAGGGTCTACGGTGCACCCTCGATGGAGTCGCACGTGTACTCCATGAGGTGCATTTCCTAG

Protein sequence

MSALVQPPPPEQNLLEKLDVFKIKGRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSMESHVYSMRCIS

Homology

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BLAST of Lag0017150.1 vs. NCBI nr
Match: XP_008448498.1 (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis melo])

HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105
Identity = 192/201 (95.52%), Postives = 197/201 (98.01%), Query Frame = 0


Query: 1   MSALVQPPPPEQNLLEKLDVFKIKGRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIF 60
           M+AL+ PPPPEQN LEKLDVFKIKGRDKQGRRILRI GKFFPAR VSLDV+KKHLEEKIF
Sbjct: 1   MAALLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFH+GVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHSGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSMESHVYSMRCIS 202
           HPRVYGAPS+ESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]

BLAST of Lag0017150.1 vs. NCBI nr
Match: XP_004146166.1 (ganglioside-induced differentiation-associated protein 2 [Cucumis sativus] >KGN55625.1 hypothetical protein Csa_010698 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 6.4e-105
Identity = 192/201 (95.52%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MSALVQPPPPEQNLLEKLDVFKIKGRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIF 60
           M+A + PPPPEQN LEKLDVFKIKGRDKQGRRILRI GKFFPAR VSLDV+KKHLEEKIF
Sbjct: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSMESHVYSMRCIS 202
           HPRVYGAPS+ESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]

BLAST of Lag0017150.1 vs. NCBI nr
Match: XP_038905989.1 (ganglioside-induced differentiation-associated protein 2 [Benincasa hispida])

HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103
Identity = 189/195 (96.92%), Postives = 192/195 (98.46%), Query Frame = 0


Query: 7   PPPPEQNLLEKLDVFKIKGRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIFPRLKNK 66
           PPPP+QN LEKLDVFKIKGRDKQGRRILRI GKFFPAR VSLDV+KKHLEEKIFPRLKNK
Sbjct: 10  PPPPDQNHLEKLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVLKKHLEEKIFPRLKNK 69

Query: 67  RFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRI 126
           RFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRI
Sbjct: 70  RFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRI 129

Query: 127 FFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYG 186
           FFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYG
Sbjct: 130 FFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYG 189

Query: 187 APSMESHVYSMRCIS 202
           APS+ESHVYSMRCIS
Sbjct: 190 APSVESHVYSMRCIS 204

[Close]

BLAST of Lag0017150.1 vs. NCBI nr
Match: XP_022971318.1 (ganglioside-induced differentiation-associated protein 2-like [Cucurbita maxima])

HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103
Identity = 190/201 (94.53%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MSALVQPPPPEQNLLEKLDVFKIKGRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIF 60
           MSA +QPPPPEQN LEK DVFKIKGRDKQ RRILRI+GKFFPARTVSLDVVK HLEEKIF
Sbjct: 1   MSAQIQPPPPEQNQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLDVVKNHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFHT VQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQAR+FL
Sbjct: 61  PRLKNKRFTILYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARVFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRI LLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYG ESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIGLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGQESD 180

Query: 181 HPRVYGAPSMESHVYSMRCIS 202
           HPRVYGAPSMESHVYSMRCIS
Sbjct: 181 HPRVYGAPSMESHVYSMRCIS 201

[Close]

BLAST of Lag0017150.1 vs. NCBI nr
Match: XP_023540079.1 (ganglioside-induced differentiation-associated protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385.6 bits (989), Expect = 2.7e-103
Identity = 191/201 (95.02%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MSALVQPPPPEQNLLEKLDVFKIKGRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIF 60
           MSA VQPPPPEQN LEK DVFKIKGRDKQ RRILRI+GKFFPARTVSL+VVK HLEEKIF
Sbjct: 1   MSAQVQPPPPEQNQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFHT VQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRI LLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYG ESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIGLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGQESD 180

Query: 181 HPRVYGAPSMESHVYSMRCIS 202
           HPRVYGAPSMESHVYSMRCIS
Sbjct: 181 HPRVYGAPSMESHVYSMRCIS 201

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BLAST of Lag0017150.1 vs. ExPASy Swiss-Prot
Match: Q7JUR6 (Protein GDAP2 homolog OS=Drosophila melanogaster OX=7227 GN=Gdap2 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.5e-13
Identity = 40/140 (28.57%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 25  GRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D+ GR ++   GK+FPA+ + L+    +L + + P +K   + I YFHT +  + N+P
Sbjct: 388 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVKGD-YVISYFHT-LTSTNNYP 447

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDL 144
            +  LR +Y  +P   K NL+A Y VHP    ++ +      F    +  KV  +  ++ 
Sbjct: 448 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKM-MTWWFTTFMAPAIKAKVHSLPGVEH 507

Query: 145 LWEHVRRNEIEVPEFIYDHD 165
           L+  + ++++E+P +I ++D
Sbjct: 508 LYSAITKDQLEIPAYITEYD 524

[Close]

BLAST of Lag0017150.1 vs. ExPASy Swiss-Prot
Match: Q292F9 (Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA15091 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.5e-13
Identity = 40/140 (28.57%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 25  GRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D+ GR ++   GK+FPA+ + L+    +L + + P +K   + I YFHT +  + N+P
Sbjct: 390 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVKGD-YVISYFHT-LTSTNNYP 449

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDL 144
            +  LR +Y  +P   K NL+A Y VHP    ++ +      F    +  KV  +  ++ 
Sbjct: 450 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKM-MTWWFTTFMAPAIKAKVHSLPGVEH 509

Query: 145 LWEHVRRNEIEVPEFIYDHD 165
           L+  + ++++E+P +I ++D
Sbjct: 510 LYSAITKDQLEIPAYITEYD 526

[Close]

BLAST of Lag0017150.1 vs. ExPASy Swiss-Prot
Match: A7T167 (Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.7e-10
Identity = 35/140 (25.00%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 25  GRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D  GR ++  + + F A+   L     +    +  R+ N+ + ++YFHT     +N P
Sbjct: 346 GVDFLGRPVVVFVARHFTAQNTDLGKAVAYF-ISVLDRIVNRDYVVVYFHTH-STEENQP 405

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDL 144
            ++ L+ +Y  +    + NL+A Y VHP + AR+ +      F  S V  KV ++S +  
Sbjct: 406 PMSFLKELYHIVDNKYRRNLKAFYIVHPTVWARI-VTWFFTTFTASSVKEKVHFLSGVQY 465

Query: 145 LWEHVRRNEIEVPEFIYDHD 165
           L++ +  +++++P ++ ++D
Sbjct: 466 LYDWINPDQLDIPAYVLEYD 482

[Close]

BLAST of Lag0017150.1 vs. ExPASy Swiss-Prot
Match: Q0IHU9 (Protein prune homolog 2 OS=Xenopus tropicalis OX=8364 GN=Prune2 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.5e-05
Identity = 30/100 (30.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 68  FTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIF 127
           + ++Y + G    +  PG+  ++  Y  I   ++ NL++   VHP    R  LA L R F
Sbjct: 187 YMVVYLN-GATPRRKMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILA-LTRPF 246

Query: 128 FTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDL 168
            +S+   K++YVS +  L E +    + +PE I   DE+L
Sbjct: 247 ISSKFSSKIKYVSTLAELSELIPMEYVHIPETIVKLDEEL 284

[Close]

BLAST of Lag0017150.1 vs. ExPASy TrEMBL
Match: A0A1S3BJ81 (ganglioside-induced differentiation-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC103490659 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 192/201 (95.52%), Postives = 197/201 (98.01%), Query Frame = 0


Query: 1   MSALVQPPPPEQNLLEKLDVFKIKGRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIF 60
           M+AL+ PPPPEQN LEKLDVFKIKGRDKQGRRILRI GKFFPAR VSLDV+KKHLEEKIF
Sbjct: 1   MAALLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFH+GVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHSGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSMESHVYSMRCIS 202
           HPRVYGAPS+ESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]

BLAST of Lag0017150.1 vs. ExPASy TrEMBL
Match: A0A0A0L0Z7 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002450 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.1e-105
Identity = 192/201 (95.52%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MSALVQPPPPEQNLLEKLDVFKIKGRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIF 60
           M+A + PPPPEQN LEKLDVFKIKGRDKQGRRILRI GKFFPAR VSLDV+KKHLEEKIF
Sbjct: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSMESHVYSMRCIS 202
           HPRVYGAPS+ESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]

BLAST of Lag0017150.1 vs. ExPASy TrEMBL
Match: A0A6J1I6H6 (ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111470075 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 9.9e-104
Identity = 190/201 (94.53%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MSALVQPPPPEQNLLEKLDVFKIKGRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIF 60
           MSA +QPPPPEQN LEK DVFKIKGRDKQ RRILRI+GKFFPARTVSLDVVK HLEEKIF
Sbjct: 1   MSAQIQPPPPEQNQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLDVVKNHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFHT VQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQAR+FL
Sbjct: 61  PRLKNKRFTILYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARVFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRI LLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYG ESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIGLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGQESD 180

Query: 181 HPRVYGAPSMESHVYSMRCIS 202
           HPRVYGAPSMESHVYSMRCIS
Sbjct: 181 HPRVYGAPSMESHVYSMRCIS 201

[Close]

BLAST of Lag0017150.1 vs. ExPASy TrEMBL
Match: A0A6J1H5D8 (ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111460261 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.8e-103
Identity = 190/201 (94.53%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MSALVQPPPPEQNLLEKLDVFKIKGRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIF 60
           MSA VQPPPPEQN LE  DVFKIKGRDKQ RRILRI+GKFFPARTVSLDVVK HLEEKIF
Sbjct: 1   MSAQVQPPPPEQNQLEMFDVFKIKGRDKQCRRILRIVGKFFPARTVSLDVVKNHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKN+RFTILYFHT VQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNRRFTILYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRI LLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYG ESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIGLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGQESD 180

Query: 181 HPRVYGAPSMESHVYSMRCIS 202
           HPRVYGAPSMESHVYSMRCIS
Sbjct: 181 HPRVYGAPSMESHVYSMRCIS 201

[Close]

BLAST of Lag0017150.1 vs. ExPASy TrEMBL
Match: A0A6J1L134 (ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111500201 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 4.9e-103
Identity = 187/201 (93.03%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MSALVQPPPPEQNLLEKLDVFKIKGRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIF 60
           M+A VQPPPPEQN LE LDVFKIKGRDKQGRRILRI GKFFPAR VSLDVVKKHLEEKIF
Sbjct: 1   MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFHT VQRSQNFPGIAALRSIY+AIPA VKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSE+YGK++YVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSMESHVYSMRCIS 202
           HPRVYGAPS++SHVYSMRCIS
Sbjct: 181 HPRVYGAPSIDSHVYSMRCIS 201

[Close]

BLAST of Lag0017150.1 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 288.5 bits (737), Expect = 4.1e-78
Identity = 135/193 (69.95%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 11  EQNLLEKLDVFKIKGRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIFPRLKNKRFTI 70
           ++ L+EKL++FKI GRDK+GR+ILRIIGKFFPAR +SLDV+KK+LEEKIFPRL  K F +
Sbjct: 10  QEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPRLGRKPFAV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTGVQRS+NFPGI+ALR+IYDAIP  V+ NL+ VYF+HP LQ+RLFLAT GR  F+ 
Sbjct: 70  LYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLATCGRFLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSM 190
            +YGK+RY+SR+D LWEHVRRNEIE+PEF+YDHD+DLEYRPMMDYG ESDH RV+   ++
Sbjct: 130 GLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHARVFAGAAV 189

Query: 191 ESHV--YSMRCIS 202
           +S V  +SMRCIS
Sbjct: 190 DSSVSSFSMRCIS 202

[Close]

BLAST of Lag0017150.1 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-42
Identity = 74/166 (44.58%), Postives = 116/166 (69.88%), Query Frame = 0


Query: 15  LEKLDVFKIKGRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIFPRLKNKRFTILYFH 74
           L+ L  F ++G D+ G RI RI+GK+FPAR VS + +KK++ +KI  +       ++Y H
Sbjct: 49  LDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMH 108

Query: 75  TGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYG 134
           + VQ+  N PGI  LR IY+ +P+ +K  L+ VYF+HP L++RL +ATLGR+  +  +Y 
Sbjct: 109 STVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGLYW 168

Query: 135 KVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 181
           K++YVSR+  LWE +++ E+E+P+F+ +HD  LE+RP+ DYG+E D
Sbjct: 169 KIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPD 214

[Close]

BLAST of Lag0017150.1 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein )

HSP 1 Score: 65.1 bits (157), Expect = 7.4e-11
Identity = 35/140 (25.00%), Postives = 77/140 (55.00%), Query Frame = 0


Query: 25  GRDKQGRRILRIIGKFFPARTVSLDVVKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D +G  ++ ++G  F  R + L+    ++ ++  P ++ K ++I+YFH+     Q  P
Sbjct: 404 GVDTEGHPVMVVVGAHFLLRCLDLERFVLYVIKEFEPVIQ-KPYSIVYFHSAAS-LQVQP 463

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDL 144
            +  ++ +   +    + NL+A+Y +HP    +  + T+ + F  + V+ KV Y  R+  
Sbjct: 464 DLGWMKRLEQILGRKHQRNLQAIYVLHPTFHLKATILTM-QFFVDNVVWKKVVYADRLLQ 523

Query: 145 LWEHVRRNEIEVPEFIYDHD 165
           L+++V R ++ +P+F++ HD
Sbjct: 524 LFKYVPREQLTIPDFVFQHD 540

The following BLAST results are available for this feature:

BLAST of Lag0017150.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448498.1	2.2e-105	95.52	PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis mel...	[more]
XP_004146166.1	6.4e-105	95.52	ganglioside-induced differentiation-associated protein 2 [Cucumis sativus] >KGN5...	[more]
XP_038905989.1	2.0e-103	96.92	ganglioside-induced differentiation-associated protein 2 [Benincasa hispida]	[more]
XP_022971318.1	2.0e-103	94.53	ganglioside-induced differentiation-associated protein 2-like [Cucurbita maxima]	[more]
XP_023540079.1	2.7e-103	95.02	ganglioside-induced differentiation-associated protein 2-like [Cucurbita pepo su...	[more]

BLAST of Lag0017150.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7JUR6	4.5e-13	28.57	Protein GDAP2 homolog OS=Drosophila melanogaster OX=7227 GN=Gdap2 PE=2 SV=1	[more]
Q292F9	4.5e-13	28.57	Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA15...	[more]
A7T167	4.7e-10	25.00	Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1	[more]
Q0IHU9	3.5e-05	30.00	Protein prune homolog 2 OS=Xenopus tropicalis OX=8364 GN=Prune2 PE=2 SV=1	[more]

BLAST of Lag0017150.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BJ81	1.1e-105	95.52	ganglioside-induced differentiation-associated protein 2 OS=Cucumis melo OX=3656...	[more]
A0A0A0L0Z7	3.1e-105	95.52	CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002450 P...	[more]
A0A6J1I6H6	9.9e-104	94.53	ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita maxim...	[more]
A0A6J1H5D8	3.8e-103	94.53	ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita mosch...	[more]
A0A6J1L134	4.9e-103	93.03	ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita maxim...	[more]

BLAST of Lag0017150.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35750.1	4.1e-78	69.95	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
AT3G10210.1	1.3e-42	44.58	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
AT1G69340.1	7.4e-11	25.00	appr-1-p processing enzyme family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001251	CRAL-TRIO lipid binding domain	SMART	SM00516	sec14_4	coord: 14..163 e-value: 1.8E-15 score: 67.4
IPR001251	CRAL-TRIO lipid binding domain	PFAM	PF13716	CRAL_TRIO_2	coord: 30..166 e-value: 3.9E-30 score: 104.9
IPR001251	CRAL-TRIO lipid binding domain	PROSITE	PS50191	CRAL_TRIO	coord: 11..168 score: 8.046931
IPR001251	CRAL-TRIO lipid binding domain	CDD	cd00170	SEC14	coord: 25..157 e-value: 3.17799E-12 score: 60.0914
IPR036865	CRAL-TRIO lipid binding domain superfamily	GENE3D	3.40.525.10		coord: 14..168 e-value: 5.3E-27 score: 96.3
IPR036865	CRAL-TRIO lipid binding domain superfamily	SUPERFAMILY	52087	CRAL/TRIO domain	coord: 19..154
None	No IPR available	PANTHER	PTHR11106:SF103	OS04G0561200 PROTEIN	coord: 11..201
None	No IPR available	PANTHER	PTHR11106	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	coord: 11..201

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0017150	Lag0017150	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0017150.1.exon3	Lag0017150.1.exon3	exon
Lag0017150.1.exon2	Lag0017150.1.exon2	exon
Lag0017150.1.exon1	Lag0017150.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0017150.1	cds.Lag0017150.1_3	CDS
cds.Lag0017150.1	cds.Lag0017150.1_2	CDS
cds.Lag0017150.1	cds.Lag0017150.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0017150.1	Lag0017150.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane