Lag0016067.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0016067.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	F-box protein CPR30-like
Location	chr12: 32760080 .. 32760986 (-)
Sequence length	717
RNA-Seq Expression	Lag0016067.1
Synteny	Lag0016067.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAACCTGGAAAATTTGCCGGAAGAAGTGTTGATGGAGATTCTGCTACGGGTGCCGCCAGAGTCTCTGGCTCGATTCATGTGCGTTGCGAAATCCTGGCACGCCCTTATTAATGACCCTAAATTCGTCGATTCTCTTCAGAAGCAAGACGTTTTACTGAAGCAAGTTGTGAAGAACAAGGAAAGTGGGAAGCAAGAAATTAGATTCTCTTTGTTGAAATATCGGTTCGTTATTCCAACATCCACGACCATTCTCACGGCTTAGTTTGCCTCCATGGTAGCGAGAGGCACAACGATATTTGCCTCTATAATCCTACCACCAGAGAGCTCCGCAAGCTCCCACCCTCGATTCTTCACATTCGCTTCGGAGAAGGTCTCTATTCGTTCACCAATGCAGTCGGATTCGGGTATGATCCGAAAGCTGAGGATTCCAAGGTGGTTAGGCTTTTTAATTTTGTAGAATCGCCTTGGAGAGTTTTCCCTCCTAGAGCCGTAGTGTTGGATTTGGGGAAAAATGAATGGAGAGAAATCGAAAGCCATCTTGGGAATTTTTTCTGGCCGCCTTCGTTTGAGATGTATTATCGAGGATTGTATTATTGGGGAAGAATTAAAACTATACAGACATTCGACATGAGTGAAGAGATTTTCAGAAATATTCCAATGCCAGAGAGTTTCCAAGAGGAGAGTTTATAGAAGCATGGGGGTTTCTCCTTGATTATCCCTTCACAGGTGATGAAATAAGGTTTGACGTTTGGGAGATGGTGATGGATGATGAATTGGTTTCATGGTCAAAGATGTTCACAATTTTTAGCCCAGTTTTTGGAATCCAACTCTTTGGCCTTTCTGGGCTCTGCTCAACTACTAATGGAGACCAAGAAGGGGCAACTGATTTTGTACAATATTAA

mRNA sequence

ATGGCGAACCTGGAAAATTTGCCGGAAGAAGTGTTGATGGAGATTCTGCTACGGGTGCCGCCAGAGTCTCTGGCTCGATTCATGTGCGTTGCGAAATCCTGGCACGCCCTTATTAATGACCCTAAATTCGTCGATTCTCTTCAGAAGCAAGACGTTTTACTGAAGCAAGTTGTGAAGAACAAGGAAAGTGGGAAGCAAGAAATTAGATTCTCTTTGTTGAAATATCGAGAGCTCCGCAAGCTCCCACCCTCGATTCTTCACATTCGCTTCGGAGAAGGTCTCTATTCGTTCACCAATGCAGTCGGATTCGGGTATGATCCGAAAGCTGAGGATTCCAAGGTGGTTAGGCTTTTTAATTTTGTAGAATCGCCTTGGAGAGTTTTCCCTCCTAGAGCCGTAGTGTTGGATTTGGGGAAAAATGAATGGAGAGAAATCGAAAGCCATCTTGGGAATTTTTTCTGGCCGCCTTCGTTTGAGATAGAGTTTCCAAGAGGAGAGTTTATAGAAGCATGGGGGTTTCTCCTTGATTATCCCTTCACAGGTGATGAAATAAGGTTTGACGTTTGGGAGATGGTGATGGATGATGAATTGGTTTCATGGTCAAAGATGTTCACAATTTTTAGCCCAGTTTTTGGAATCCAACTCTTTGGCCTTTCTGGGCTCTGCTCAACTACTAATGGAGACCAAGAAGGGGCAACTGATTTTGTACAATATTAA

Coding sequence (CDS)

ATGGCGAACCTGGAAAATTTGCCGGAAGAAGTGTTGATGGAGATTCTGCTACGGGTGCCGCCAGAGTCTCTGGCTCGATTCATGTGCGTTGCGAAATCCTGGCACGCCCTTATTAATGACCCTAAATTCGTCGATTCTCTTCAGAAGCAAGACGTTTTACTGAAGCAAGTTGTGAAGAACAAGGAAAGTGGGAAGCAAGAAATTAGATTCTCTTTGTTGAAATATCGAGAGCTCCGCAAGCTCCCACCCTCGATTCTTCACATTCGCTTCGGAGAAGGTCTCTATTCGTTCACCAATGCAGTCGGATTCGGGTATGATCCGAAAGCTGAGGATTCCAAGGTGGTTAGGCTTTTTAATTTTGTAGAATCGCCTTGGAGAGTTTTCCCTCCTAGAGCCGTAGTGTTGGATTTGGGGAAAAATGAATGGAGAGAAATCGAAAGCCATCTTGGGAATTTTTTCTGGCCGCCTTCGTTTGAGATAGAGTTTCCAAGAGGAGAGTTTATAGAAGCATGGGGGTTTCTCCTTGATTATCCCTTCACAGGTGATGAAATAAGGTTTGACGTTTGGGAGATGGTGATGGATGATGAATTGGTTTCATGGTCAAAGATGTTCACAATTTTTAGCCCAGTTTTTGGAATCCAACTCTTTGGCCTTTCTGGGCTCTGCTCAACTACTAATGGAGACCAAGAAGGGGCAACTGATTTTGTACAATATTAA

Protein sequence

MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPKFVDSLQKQDVLLKQVVKNKESGKQEIRFSLLKYRELRKLPPSILHIRFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNFVESPWRVFPPRAVVLDLGKNEWREIESHLGNFFWPPSFEIEFPRGEFIEAWGFLLDYPFTGDEIRFDVWEMVMDDELVSWSKMFTIFSPVFGIQLFGLSGLCSTTNGDQEGATDFVQY

Homology

[Close]

BLAST of Lag0016067.1 vs. NCBI nr
Match: XP_038906036.1 (F-box protein CPR1-like [Benincasa hispida])

HSP 1 Score: 165.6 bits (418), Expect = 5.1e-37
Identity = 124/318 (38.99%), Postives = 150/318 (47.17%), Query Frame = 0


Query: 1   MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPK-----FVDSLQKQDVLLK 60
           MA+L NLPEEV++EIL R+PPESL RF CV KSW+ALINDPK     F +SLQ + VLLK
Sbjct: 1   MASLGNLPEEVMIEILSRLPPESLLRFKCVRKSWYALINDPKFKAKHFSNSLQHKQVLLK 60

Query: 61  QVVKNKESGKQEIRFSLLKY---------------------------------------- 120
           ++V  K SG +E  FS LK                                         
Sbjct: 61  RLV-TKNSGNKENIFSFLKLPLSIDRSVSVSDLDLPFDEDFRFFEIHGHSHGLLCLTDLR 120

Query: 121 ----------RELRKLPPSILHI----RFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNFV 180
                     RE  KLPPSIL +       +G  S TNAVGFGYD K+ D KVVR+ +FV
Sbjct: 121 KDIFLCNPSTREFHKLPPSILLLTEPPAEPDGYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 ESPWRVFPPRAVVLDLGKNEWREIESHL-GNFFWPPSFEI----------EFPRGEFI-- 215
           E P    PPR  + DL K+ WREIE+ + G+ FW P FE+          E   G  I  
Sbjct: 181 EGPGYFHPPRVEIYDLSKDRWREIETPVCGHVFWAPCFEMYHEGTYYWWAETEGGTEIIQ 240

[Close]

BLAST of Lag0016067.1 vs. NCBI nr
Match: XP_008443401.1 (PREDICTED: F-box protein CPR30-like [Cucumis melo] >KAA0053768.1 F-box protein CPR30-like [Cucumis melo var. makuwa] >TYK25634.1 F-box protein CPR30-like [Cucumis melo var. makuwa])

HSP 1 Score: 162.2 bits (409), Expect = 5.7e-36
Identity = 120/319 (37.62%), Postives = 149/319 (46.71%), Query Frame = 0


Query: 1   MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPKFVD-----SLQKQDVLLK 60
           MA+L NLP+ V++EIL R+PPESL RF CV KSW+AL NDPKF +     SLQ + VLLK
Sbjct: 1   MASLGNLPDGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKEKHFSTSLQHKHVLLK 60

Query: 61  QVVKNKESGKQEIRFSLLKY---------------------------------------- 120
           + V  KESG +E  FS+LK                                         
Sbjct: 61  RFV-TKESGNEENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFELHGHSHGLLCLTDLL 120

Query: 121 ----------RELRKLPPSILHI----RFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNFV 180
                     RE  KLPPSIL +       +G  S TNAVGFGYD K+ D KVVR+ +FV
Sbjct: 121 KDIFLCNPSTREFHKLPPSILLLTEPPAEPDGYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 ESPWRVFPPRAVVLDLGKNEWREIESHL-GNFFWPPSFEIEFPRGEFI------------ 215
           E P   +PP+  V DL    WREI++ + G+ FW P FE+ F  G +             
Sbjct: 181 EGPGYFYPPKVEVYDLSTERWREIQTPVSGHVFWAPCFEV-FHEGTYYWWADDDGNTEII 240

[Close]

BLAST of Lag0016067.1 vs. NCBI nr
Match: XP_008443403.1 (PREDICTED: F-box protein CPR30-like [Cucumis melo] >KAA0053766.1 F-box protein CPR30-like [Cucumis melo var. makuwa])

HSP 1 Score: 160.2 bits (404), Expect = 2.2e-35
Identity = 117/318 (36.79%), Postives = 149/318 (46.86%), Query Frame = 0


Query: 1   MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPK-----FVDSLQKQDVLLK 60
           MA+L NLP+ V++EIL R+PPESL RF CV KSW+AL NDPK     F  SLQ + +LLK
Sbjct: 1   MASLGNLPDGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLK 60

Query: 61  QVVKNKESGKQEIRFSLLKY---------------------------------------- 120
           ++V  K+SGK+E  FS+LK                                         
Sbjct: 61  RLV-TKDSGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLR 120

Query: 121 ----------RELRKLPPSILHI----RFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNFV 180
                     RE  +LPPSIL +       +   S TNAVGFGYD K+ D KVVR+ +FV
Sbjct: 121 KDIFLCNPSTREFHQLPPSILLLPEPSAEPDDYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 ESPWRVFPPRAVVLDLGKNEWREIESHL-GNFFWPPSFEI-------------------- 215
           E P   +PP+  V DL K  WREI++ + G+ FW P FE+                    
Sbjct: 181 EGPGYFYPPKVEVYDLSKERWREIQTPVSGHVFWAPCFEVFHEGTYYWWADADGNTEIIL 240

[Close]

BLAST of Lag0016067.1 vs. NCBI nr
Match: TYK25636.1 (F-box protein CPR30-like [Cucumis melo var. makuwa])

HSP 1 Score: 160.2 bits (404), Expect = 2.2e-35
Identity = 117/318 (36.79%), Postives = 149/318 (46.86%), Query Frame = 0


Query: 1   MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPK-----FVDSLQKQDVLLK 60
           MA+L NLP+ V++EIL R+PPESL RF CV KSW+AL NDPK     F  SLQ + +LLK
Sbjct: 1   MASLGNLPDGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLK 60

Query: 61  QVVKNKESGKQEIRFSLLKY---------------------------------------- 120
           ++V  K+SGK+E  FS+LK                                         
Sbjct: 61  RLV-TKDSGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLR 120

Query: 121 ----------RELRKLPPSILHI----RFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNFV 180
                     RE  +LPPSIL +       +   S TNAVGFGYD K+ D KVVR+ +FV
Sbjct: 121 KDIFLCNPSTREFHQLPPSILLLPEPSAEPDDYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 ESPWRVFPPRAVVLDLGKNEWREIESHL-GNFFWPPSFEI-------------------- 215
           E P   +PP+  V DL K  WREI++ + G+ FW P FE+                    
Sbjct: 181 EGPGYFYPPKVEVYDLSKERWREIQTPVSGHVFWAPCFEVFHEGTYYWWADADGNTEIIL 240

[Close]

BLAST of Lag0016067.1 vs. NCBI nr
Match: XP_023526117.1 (F-box protein CPR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.1 bits (401), Expect = 4.8e-35
Identity = 119/318 (37.42%), Postives = 154/318 (48.43%), Query Frame = 0


Query: 1   MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPKFV-----DSLQKQDVLLK 60
           MA L +LPEEV++EIL R+PPESL RF  V KSW+ALI++PKF      +SL+++ VLLK
Sbjct: 1   MAALGHLPEEVMIEILSRLPPESLLRFKTVRKSWYALIDNPKFATKHFSNSLKQKHVLLK 60

Query: 61  QVVKNKESGKQEIRFSLLKY---------------------------------------- 120
           ++V  K SGK+E  FS LK+                                        
Sbjct: 61  RLV-TKNSGKKENIFSFLKFPLPLDGSVPVYDVDLPFDEDFRYFEIRGHSHGLLCLTDLR 120

Query: 121 ----------RELRKLPPSILHI----RFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNFV 180
                     RE RKLPPSIL +       +G  S TNAVGFGYD K+ D KVVR+ NFV
Sbjct: 121 RDIFLCNPATREFRKLPPSILLLTKPPTEPDGYDSSTNAVGFGYDSKSRDFKVVRVVNFV 180

Query: 181 ESPWRVFPPRAVVLDLGKNEWREIESHL-GNFFWPPSFEI----------EFPRG-EFIE 215
           E P     PR  + DL K+ WREIE+ + G+ FW PSFE+          +   G E I+
Sbjct: 181 EGPGYFHLPRVEIYDLSKDRWREIETPICGHVFWAPSFEMYHEGTYYWWADTDEGVEIIQ 240

[Close]

BLAST of Lag0016067.1 vs. ExPASy Swiss-Prot
Match: Q9LU24 (Putative F-box protein At3g16210 OS=Arabidopsis thaliana OX=3702 GN=At3g16210 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-08
Identity = 63/217 (29.03%), Postives = 88/217 (40.55%), Query Frame = 0


Query: 7   LPEEVLMEILLRVPPESLARFMCVAKSWHALINDP------------KFVDSLQKQDVLL 66
           LPEE+ +EIL+R+  + LARF CV K+W  LINDP            KFV    K   +L
Sbjct: 5   LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMSPAKFVSFYDKNFYML 64

Query: 67  -----KQVVKNK------ESGKQEIRFSL---------LKYRELRKLPPSILHIRF--GE 126
                  V+ NK      +S   E    L         LK   L    P     +     
Sbjct: 65  DVEGKHPVITNKLDFPLDQSMIDESTCVLHCDGTLCVTLKNHTLMVWNPFSKQFKIVPNP 124

Query: 127 GLYSFTNAVGFGYDPKAEDSKVVRLFNFVESPWRVFPPRAVVLDLGKNEWREIESHLGNF 183
           G+Y  +N +GFGYDP  +D KVV    F++   R+    A V +     W E        
Sbjct: 125 GIYQDSNILGFGYDPVHDDYKVV---TFID---RLDVSTAHVFEFRTGSWGE-------- 184

[Close]

BLAST of Lag0016067.1 vs. ExPASy Swiss-Prot
Match: Q9SU30 (F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-07
Identity = 51/191 (26.70%), Postives = 83/191 (43.46%), Query Frame = 0


Query: 4   LENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPKFVDS-----LQKQD---VLLK 63
           +  +P +++ +I LR+P ++L R   ++K  + LINDP F++S     LQ  D   +LL+
Sbjct: 1   MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLR 60

Query: 64  QVVK------------------NKESGKQEIRFSL-----------------LKYRELRK 123
             ++                   K  G  E+  S                     R++ +
Sbjct: 61  GALRLYSVDLDSLDSVSDVEHPMKRGGPTEVFGSSNGLIGLSNSPTDLAVFNPSTRQIHR 120

Query: 124 LPPSILHIRFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNF-VESPWRV---FPPRAVVLD 148
           LPPS + +  G     +    G GYD  ++D KVVR+  F ++S   +   FP    V  
Sbjct: 121 LPPSSIDLPDGSSTRGYV-FYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFS 180

[Close]

BLAST of Lag0016067.1 vs. ExPASy Swiss-Prot
Match: O80980 (F-box protein At2g14710 OS=Arabidopsis thaliana OX=3702 GN=At2g14710 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.5e-07
Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = 0


Query: 1  MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPKFVDS 47
          MA+L+NLP E++ EIL RVPP+SL RF  V+K W+AL +D  F+++
Sbjct: 1  MAHLKNLPWELIEEILSRVPPKSLVRFRTVSKQWNALFDDKTFINN 46

[Close]

BLAST of Lag0016067.1 vs. ExPASy Swiss-Prot
Match: Q9FX09 (Putative F-box protein At1g47390 OS=Arabidopsis thaliana OX=3702 GN=At1g47390 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.3e-06
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 1  MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPKFVDS 47
          MA  E LP E++ EIL RVPPESL RF  V+K W+AL +D  F+++
Sbjct: 1  MAPEEKLPCELIEEILSRVPPESLVRFRTVSKKWNALFDDKMFINN 46

[Close]

BLAST of Lag0016067.1 vs. ExPASy Swiss-Prot
Match: Q9SYD0 (Putative F-box only protein 10 OS=Arabidopsis thaliana OX=3702 GN=FBX10 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.3e-06
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 6  NLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPKFVD 46
          NLP E++ EIL RVPP+SLARF  V K W++L +D KFV+
Sbjct: 5  NLPWELVEEILYRVPPQSLARFRTVCKQWNSLFDDNKFVN 44

[Close]

BLAST of Lag0016067.1 vs. ExPASy TrEMBL
Match: A0A5D3DPY4 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007940 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.8e-36
Identity = 120/319 (37.62%), Postives = 149/319 (46.71%), Query Frame = 0


Query: 1   MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPKFVD-----SLQKQDVLLK 60
           MA+L NLP+ V++EIL R+PPESL RF CV KSW+AL NDPKF +     SLQ + VLLK
Sbjct: 1   MASLGNLPDGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKEKHFSTSLQHKHVLLK 60

Query: 61  QVVKNKESGKQEIRFSLLKY---------------------------------------- 120
           + V  KESG +E  FS+LK                                         
Sbjct: 61  RFV-TKESGNEENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFELHGHSHGLLCLTDLL 120

Query: 121 ----------RELRKLPPSILHI----RFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNFV 180
                     RE  KLPPSIL +       +G  S TNAVGFGYD K+ D KVVR+ +FV
Sbjct: 121 KDIFLCNPSTREFHKLPPSILLLTEPPAEPDGYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 ESPWRVFPPRAVVLDLGKNEWREIESHL-GNFFWPPSFEIEFPRGEFI------------ 215
           E P   +PP+  V DL    WREI++ + G+ FW P FE+ F  G +             
Sbjct: 181 EGPGYFYPPKVEVYDLSTERWREIQTPVSGHVFWAPCFEV-FHEGTYYWWADDDGNTEII 240

[Close]

BLAST of Lag0016067.1 vs. ExPASy TrEMBL
Match: A0A1S3B8N6 (F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486995 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.8e-36
Identity = 120/319 (37.62%), Postives = 149/319 (46.71%), Query Frame = 0


Query: 1   MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPKFVD-----SLQKQDVLLK 60
           MA+L NLP+ V++EIL R+PPESL RF CV KSW+AL NDPKF +     SLQ + VLLK
Sbjct: 1   MASLGNLPDGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKEKHFSTSLQHKHVLLK 60

Query: 61  QVVKNKESGKQEIRFSLLKY---------------------------------------- 120
           + V  KESG +E  FS+LK                                         
Sbjct: 61  RFV-TKESGNEENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFELHGHSHGLLCLTDLL 120

Query: 121 ----------RELRKLPPSILHI----RFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNFV 180
                     RE  KLPPSIL +       +G  S TNAVGFGYD K+ D KVVR+ +FV
Sbjct: 121 KDIFLCNPSTREFHKLPPSILLLTEPPAEPDGYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 ESPWRVFPPRAVVLDLGKNEWREIESHL-GNFFWPPSFEIEFPRGEFI------------ 215
           E P   +PP+  V DL    WREI++ + G+ FW P FE+ F  G +             
Sbjct: 181 EGPGYFYPPKVEVYDLSTERWREIQTPVSGHVFWAPCFEV-FHEGTYYWWADDDGNTEII 240

[Close]

BLAST of Lag0016067.1 vs. ExPASy TrEMBL
Match: A0A5A7UHP3 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001510 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-35
Identity = 117/318 (36.79%), Postives = 149/318 (46.86%), Query Frame = 0


Query: 1   MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPK-----FVDSLQKQDVLLK 60
           MA+L NLP+ V++EIL R+PPESL RF CV KSW+AL NDPK     F  SLQ + +LLK
Sbjct: 1   MASLGNLPDGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLK 60

Query: 61  QVVKNKESGKQEIRFSLLKY---------------------------------------- 120
           ++V  K+SGK+E  FS+LK                                         
Sbjct: 61  RLV-TKDSGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLR 120

Query: 121 ----------RELRKLPPSILHI----RFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNFV 180
                     RE  +LPPSIL +       +   S TNAVGFGYD K+ D KVVR+ +FV
Sbjct: 121 KDIFLCNPSTREFHQLPPSILLLPEPSAEPDDYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 ESPWRVFPPRAVVLDLGKNEWREIESHL-GNFFWPPSFEI-------------------- 215
           E P   +PP+  V DL K  WREI++ + G+ FW P FE+                    
Sbjct: 181 EGPGYFYPPKVEVYDLSKERWREIQTPVSGHVFWAPCFEVFHEGTYYWWADADGNTEIIL 240

[Close]

BLAST of Lag0016067.1 vs. ExPASy TrEMBL
Match: A0A5D3DPN6 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007960 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-35
Identity = 117/318 (36.79%), Postives = 149/318 (46.86%), Query Frame = 0


Query: 1   MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPK-----FVDSLQKQDVLLK 60
           MA+L NLP+ V++EIL R+PPESL RF CV KSW+AL NDPK     F  SLQ + +LLK
Sbjct: 1   MASLGNLPDGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLK 60

Query: 61  QVVKNKESGKQEIRFSLLKY---------------------------------------- 120
           ++V  K+SGK+E  FS+LK                                         
Sbjct: 61  RLV-TKDSGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLR 120

Query: 121 ----------RELRKLPPSILHI----RFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNFV 180
                     RE  +LPPSIL +       +   S TNAVGFGYD K+ D KVVR+ +FV
Sbjct: 121 KDIFLCNPSTREFHQLPPSILLLPEPSAEPDDYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 ESPWRVFPPRAVVLDLGKNEWREIESHL-GNFFWPPSFEI-------------------- 215
           E P   +PP+  V DL K  WREI++ + G+ FW P FE+                    
Sbjct: 181 EGPGYFYPPKVEVYDLSKERWREIQTPVSGHVFWAPCFEVFHEGTYYWWADADGNTEIIL 240

[Close]

BLAST of Lag0016067.1 vs. ExPASy TrEMBL
Match: A0A1S3B7G6 (F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486997 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-35
Identity = 117/318 (36.79%), Postives = 149/318 (46.86%), Query Frame = 0


Query: 1   MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPK-----FVDSLQKQDVLLK 60
           MA+L NLP+ V++EIL R+PPESL RF CV KSW+AL NDPK     F  SLQ + +LLK
Sbjct: 1   MASLGNLPDGVIIEILSRLPPESLLRFKCVRKSWYALFNDPKFKAKHFSTSLQHKHLLLK 60

Query: 61  QVVKNKESGKQEIRFSLLKY---------------------------------------- 120
           ++V  K+SGK+E  FS+LK                                         
Sbjct: 61  RLV-TKDSGKKENIFSILKLPLSIHSSLSISDIDLPFHEDFRFFEIHGHSHGLLCLTDLR 120

Query: 121 ----------RELRKLPPSILHI----RFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNFV 180
                     RE  +LPPSIL +       +   S TNAVGFGYD K+ D KVVR+ +FV
Sbjct: 121 KDIFLCNPSTREFHQLPPSILLLPEPSAEPDDYDSSTNAVGFGYDSKSRDFKVVRVVDFV 180

Query: 181 ESPWRVFPPRAVVLDLGKNEWREIESHL-GNFFWPPSFEI-------------------- 215
           E P   +PP+  V DL K  WREI++ + G+ FW P FE+                    
Sbjct: 181 EGPGYFYPPKVEVYDLSKERWREIQTPVSGHVFWAPCFEVFHEGTYYWWADADGNTEIIL 240

[Close]

BLAST of Lag0016067.1 vs. TAIR 10
Match: AT3G16210.1 (F-box family protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-09
Identity = 63/217 (29.03%), Postives = 88/217 (40.55%), Query Frame = 0


Query: 7   LPEEVLMEILLRVPPESLARFMCVAKSWHALINDP------------KFVDSLQKQDVLL 66
           LPEE+ +EIL+R+  + LARF CV K+W  LINDP            KFV    K   +L
Sbjct: 5   LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMSPAKFVSFYDKNFYML 64

Query: 67  -----KQVVKNK------ESGKQEIRFSL---------LKYRELRKLPPSILHIRF--GE 126
                  V+ NK      +S   E    L         LK   L    P     +     
Sbjct: 65  DVEGKHPVITNKLDFPLDQSMIDESTCVLHCDGTLCVTLKNHTLMVWNPFSKQFKIVPNP 124

Query: 127 GLYSFTNAVGFGYDPKAEDSKVVRLFNFVESPWRVFPPRAVVLDLGKNEWREIESHLGNF 183
           G+Y  +N +GFGYDP  +D KVV    F++   R+    A V +     W E        
Sbjct: 125 GIYQDSNILGFGYDPVHDDYKVV---TFID---RLDVSTAHVFEFRTGSWGE-------- 184

[Close]

BLAST of Lag0016067.1 vs. TAIR 10
Match: AT4G12560.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08
Identity = 51/191 (26.70%), Postives = 83/191 (43.46%), Query Frame = 0


Query: 4   LENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPKFVDS-----LQKQD---VLLK 63
           +  +P +++ +I LR+P ++L R   ++K  + LINDP F++S     LQ  D   +LL+
Sbjct: 1   MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLR 60

Query: 64  QVVK------------------NKESGKQEIRFSL-----------------LKYRELRK 123
             ++                   K  G  E+  S                     R++ +
Sbjct: 61  GALRLYSVDLDSLDSVSDVEHPMKRGGPTEVFGSSNGLIGLSNSPTDLAVFNPSTRQIHR 120

Query: 124 LPPSILHIRFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNF-VESPWRV---FPPRAVVLD 148
           LPPS + +  G     +    G GYD  ++D KVVR+  F ++S   +   FP    V  
Sbjct: 121 LPPSSIDLPDGSSTRGYV-FYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFS 180

[Close]

BLAST of Lag0016067.1 vs. TAIR 10
Match: AT4G12560.2 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08
Identity = 51/191 (26.70%), Postives = 83/191 (43.46%), Query Frame = 0


Query: 4   LENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPKFVDS-----LQKQD---VLLK 63
           +  +P +++ +I LR+P ++L R   ++K  + LINDP F++S     LQ  D   +LL+
Sbjct: 1   MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLR 60

Query: 64  QVVK------------------NKESGKQEIRFSL-----------------LKYRELRK 123
             ++                   K  G  E+  S                     R++ +
Sbjct: 61  GALRLYSVDLDSLDSVSDVEHPMKRGGPTEVFGSSNGLIGLSNSPTDLAVFNPSTRQIHR 120

Query: 124 LPPSILHIRFGEGLYSFTNAVGFGYDPKAEDSKVVRLFNF-VESPWRV---FPPRAVVLD 148
           LPPS + +  G     +    G GYD  ++D KVVR+  F ++S   +   FP    V  
Sbjct: 121 LPPSSIDLPDGSSTRGYV-FYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFS 180

[Close]

BLAST of Lag0016067.1 vs. TAIR 10
Match: AT2G14710.1 (F-box family protein )

HSP 1 Score: 55.8 bits (133), Expect = 5.3e-08
Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = 0


Query: 1  MANLENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPKFVDS 47
          MA+L+NLP E++ EIL RVPP+SL RF  V+K W+AL +D  F+++
Sbjct: 1  MAHLKNLPWELIEEILSRVPPKSLVRFRTVSKQWNALFDDKTFINN 46

[Close]

BLAST of Lag0016067.1 vs. TAIR 10
Match: AT1G53370.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-07
Identity = 43/168 (25.60%), Postives = 77/168 (45.83%), Query Frame = 0


Query: 4   LENLPEEVLMEILLRVPPESLARFMCVAKSWHALINDPKFVDSLQKQDVLLKQVVKNKES 63
           ++++P ++L++IL R PP+S+ARF CV+K W +++  P F +    + V L+++    + 
Sbjct: 25  IDSIPVDLLIDILSRFPPKSIARFYCVSKLWESILRGPDFTELYLTKSVALRRLFFALKV 84

Query: 64  GKQEIRFS----------------LLKYRELRKLPPSILHIRFGEGLYSF--------TN 123
             + + FS                   Y+   K  P+ +    G GL+          T 
Sbjct: 85  NTELLVFSSPQPQIPDENSSLVVEATPYKCFPKKIPTEICTALG-GLFITLPKLKTIGTK 144

Query: 124 AVGFGYDPKAEDSKVVRLFNFVESPWRVFP--PRAVVLDLGKNEWREI 146
              FGYDP ++  KV+ +     SP    P   + + L+ G+  WR I
Sbjct: 145 RFSFGYDPISKKFKVLCV---TWSPCGTLPNIHQVLTLETGERLWRTI 188

The following BLAST results are available for this feature:

BLAST of Lag0016067.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906036.1	5.1e-37	38.99	F-box protein CPR1-like [Benincasa hispida]	[more]
XP_008443401.1	5.7e-36	37.62	PREDICTED: F-box protein CPR30-like [Cucumis melo] >KAA0053768.1 F-box protein C...	[more]
XP_008443403.1	2.2e-35	36.79	PREDICTED: F-box protein CPR30-like [Cucumis melo] >KAA0053766.1 F-box protein C...	[more]
TYK25636.1	2.2e-35	36.79	F-box protein CPR30-like [Cucumis melo var. makuwa]	[more]
XP_023526117.1	4.8e-35	37.42	F-box protein CPR1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0016067.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU24	3.1e-08	29.03	Putative F-box protein At3g16210 OS=Arabidopsis thaliana OX=3702 GN=At3g16210 PE...	[more]
Q9SU30	1.5e-07	26.70	F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2	[more]
O80980	7.5e-07	54.35	F-box protein At2g14710 OS=Arabidopsis thaliana OX=3702 GN=At2g14710 PE=2 SV=1	[more]
Q9FX09	8.3e-06	54.35	Putative F-box protein At1g47390 OS=Arabidopsis thaliana OX=3702 GN=At1g47390 PE...	[more]
Q9SYD0	8.3e-06	60.00	Putative F-box only protein 10 OS=Arabidopsis thaliana OX=3702 GN=FBX10 PE=4 SV=...	[more]

BLAST of Lag0016067.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPY4	2.8e-36	37.62	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B8N6	2.8e-36	37.62	F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486995 PE=4 SV=1	[more]
A0A5A7UHP3	1.0e-35	36.79	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3DPN6	1.0e-35	36.79	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B7G6	1.0e-35	36.79	F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486997 PE=4 SV=1	[more]

BLAST of Lag0016067.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16210.1	2.2e-09	29.03	F-box family protein	[more]
AT4G12560.1	1.1e-08	26.70	F-box and associated interaction domains-containing protein	[more]
AT4G12560.2	1.1e-08	26.70	F-box and associated interaction domains-containing protein	[more]
AT2G14710.1	5.3e-08	54.35	F-box family protein	[more]
AT1G53370.1	1.6e-07	25.60	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 7..46 e-value: 1.6E-6 score: 37.6
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 4..43 e-value: 3.6E-10 score: 39.4
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..47 score: 12.093921
None	No IPR available	GENE3D	1.20.1280.50		coord: 5..43 e-value: 1.3E-8 score: 36.8
None	No IPR available	PANTHER	PTHR31111	BNAA05G37150D PROTEIN-RELATED	coord: 3..158
None	No IPR available	PANTHER	PTHR31111:SF22	BNAA05G37150D PROTEIN	coord: 3..158
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 4..55

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0016067	Lag0016067	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0016067.1.exon3	Lag0016067.1.exon3	exon
Lag0016067.1.exon2	Lag0016067.1.exon2	exon
Lag0016067.1.exon1	Lag0016067.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0016067.1	cds.Lag0016067.1_3	CDS
cds.Lag0016067.1	cds.Lag0016067.1_2	CDS
cds.Lag0016067.1	cds.Lag0016067.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0016067.1	Lag0016067.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding