Lag0011988.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0011988.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr1: 36082810 .. 36086367 (-)
Sequence length	1416
RNA-Seq Expression	Lag0011988.1
Synteny	Lag0011988.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGCTCTTCGTCGAGCTTCTTCGCCTTTCAGGTATTCTCCTGTTCTCTACCTGTAAAAATGCTTTTAGGAGTGGCAATGGCCTTCACAAACATGCTTTTCACTTACCATTCTTTTGCGACATCTCTTATTGTGAGAACCCAAATAATTAAAAAAAAAAAACACCCCAGATTCGTAACGAACAATCTAAGGTAGAGTTTTGTTATAACATGATTCGGAATTAAATTCAGAGAAACGAAAGAGAAAAATAAGAATACTGTTGTCTTCCTTGGCTTTACTGTTTCCATGTCTAGACTATCATTGTTTTCCTGTTCCCAGCTCCTCGCCAGCAGACTTGCCATGTCTGAAAATTGTGTTACCAATTCTTCATGCGTATGTCCTGAATTTGCAGTGTTGTCACCAACTTTAAATCTTAACCTGCATTATTACATTGAGTATTAGCTTATTTTGTCTGCCAATTACTTGTTTGTATTCAAGTATATGTTAAAATGTATCTAAGAAATAAAGGGTATCTAACTATCTAGTCGTGCTCATATCTCTTGTTTGAGAAATTGTCTGATTTGGTTGTTTTCTTTTTTAATTGCTTTCAGGAACCAAGTACTTGGAATTGGAGCTTCATATACTTGTCTTAAATTAGATGCATTGACTACTTGCACAGATGTAAAACGCGGCATAGCTACTTCCCATGTATCATCTGATAGTTTTATACTTTCAAATTGGTTTCACAACGCTATTCATGGGCCTTTAAGACATGGTGTAGGTAGACACAGTCTTTCTTCACAAGCTGGTGCAAGAAGTGGTGAGGAAGATGACTTAGAAGATGGATTTTCGGAACTCGAATCACCTGAAAAATTAAAGCCAATTCAAACTGCTGATTTAGAGGAAGATGACATGTTCATTTCTGATCCAGAACTCATTGAAGATGGTGATGGTGATTCAGCAGGGATCTCTCAAAATGATCTAGATTTATCTGAGGCTATGGATGATGTGGATGAAAAGAGACCAATAAATAGAAGGGTTCACTCGGAACTGTTTCAGGCCATAATGAGTAGTCCAGGCTTGTCTATCCATAATGTTCTTGATAAATGGGTGAGAGAAGGAAAGGATTTAAACAGATCTGAGATATCATTAACCATGTCTAATCTCCGTAAACGGCGACTCTATGGAAGGGCATTGCAGGTGATTTATCATCATTTTATTAATAGTTCCATTCCAATGGTTTAGAATCTTGCTGTTTTTGCCTTGTGGTTATCTCAGGAAGAGTACAATAGGCTTAGCCATACACATGAAAAGTCAGCTTCCTTTGGTTTCAAAAGTTAAGAAAAGAAAAAGCATCTTCAGTATATCCTATTAAAAACGGGAGTAACTAGCATACAATTGTAAAGCATGTGAATACCATCAATGCAATGATTTTACATAGTAATAAATATTATTTTTTTATATATAATTTCTTTTTGAGAATAACTATGCTTTGCACCACCTTAAGGCTTTAAAAGAATAACAACTCTATTTGTATTTCATTTTTATTGGACTTCTTGTATCATACCACCTTGTGGTTACTGGTTGTAGTTATACTCCCATCACAAAAAGAACAAGATTCAAGTTCACATTTCTACTTTTTTCTACCACATGTTCCTAGCAATTATTTCAGCACCATATGATTTATGGTCTGTGAAGGTGATTGTAAACATCTGCCTCAAATCAGGGAAGAATTATTAGTTATTTGTCTGCTGCTACCTCATGATTATTCAAGTATGTGGCAGATTACAAATATTCTGGTTGCTTGTTGTATGATTTATGCTGCATATTATATCTGTGCTAACAAGTTTTGTAGTTGAAACTAGGGGTGTTCATCGGTCGGTCGGTTTTCCAGAAATTTGGAAACCGACGACTTTCGATGGGTGTTGCCAGCCGACCGACCGAACGGTCGGTTCGGTCGGTCGGTTTTTTTAAAGATCATGAGAATTGAGATGAAGAACGACGGTCGGTCGGTTATGTGTAAAATCGGTCGGTCGGTCGGTAAATTATGTGTTTTTTTTTTAAAAAATGGTTTTTTTATATATAAATATATTGGGCGGTCGGTCGGTTATGTGTAAAGTCGGTTGGTTATGTGTTTTTTTTAAAAAATTGGTTTTTTTTATATATATAAATATATCGGTCGGTCGGTCGGTTATGTGTAAAATTGTTTGGCCGACCGACCTCCTCAATCTAAGAACCGACACCGACCGACTTGGTCGGCTAACCGACCGACCGACGTCGGTTCGGTCGGTTTCGGTCGGTCGTGTCGGTTTTCGGTCTGAAGATGAACACCCCTAGTTGAAACTCTGTGAGGCTATAATCCACATTTTTCACCATGTTTGAATGAGGGTCAGTCTGTAGAGTTTAGTTCATTCAATTTCATACTTTCTTCTGTGGCGGCTCGTTTATGGCAAAAAAATTTGGTGCAAAGCCAGGAATATGGTTTTAAAAGATGTATTGCAGAATCACTTATTATTCATTTGAAGTTCTTAAAACAGAATTTCTTATTTTAGTTTATTTTCCTACACCTACAATTTTTCAGTCTTCTAGAAGGACATATTGGTTTCTGATGACGATTATTATTATTGTCATTATTTCCTTTGTTACTCTGGAATCTGGATAAGAATCCTAAGCATCCTATAATAATACTTGAGAAGATAATAATGTTGATGGATAACTGAGGATACACTTATGCAGTACACTATTGTTGTAACTGTGAGTCATAATAATTTTTCTTAAGGTTGAATTAAAGAATGTTTTAAGGGAATTTTTAATAAACTCTTCATGCTTGGCTTTGCAGTTATCAGAGTGGCTGGAGGCAAATAAGCGTCTTGACTTTATCGAGAGAGATTATGCTTCTCGCATTGACTTGATAGCAAAGGTACGTGGCTTACCAAAGGCTGAACTCTACATTGAGAAAATCCCAAAATCTTTCAGAGGCGAGACAATCTACCGAACACTATTGGCAAATTGTGTTGTTGCCAACAATGTCAAGAAAGCAGAGGACGTATTCAATCAAATGAACGATCTAGGATTTCCAATTACTGCATTTTCTTGCAACCAGTTGCTTCTTCTTTTCAAGCGACACAACAAGAAGAAAATCGCAGACATTTTATCAGTAATGGAGAAAGAAAACGTCAAGCCTTCTCTCTTCACTTATAAGATACTAATTGATGCTAAAGGTCAATCCCATGACATGGTAGGGATGGACCGAGTTATTGAGACGATGAAGACTGATGGCATTGAACCAGACATCAACACACAAGCCATCATGGTTAAGCACTATGCTTCTAGTGGGCTGAAAGAGAGAGCTGTGGAAGTTCTCAGGGAGATTGAGGGAAACGACCTGAATAAGAAGCGTTGGGTTTGCCGTTTCCTGCTCCCTCTCTACGGAGTAATGCAAATGGCTGATGAAGTGGAGAGAGTTTGGAATGTCTGCAAGTCAATCCTCGAATCGAAGAATGCATGTGTGCCATTGTTGCTTGGGGGAAGCTGCACAATATCGAACAAGCCGAAGCAGTATTCAGTCGGATGTTAA

mRNA sequence

ATGTGGGCTCTTCGTCGAGCTTCTTCGCCTTTCAGCTCCTCGCCAGCAGACTTGCCATGTCTGAAAATTGTGTTACCAATTCTTCATGCGAACCAAGTACTTGGAATTGGAGCTTCATATACTTGTCTTAAATTAGATGCATTGACTACTTGCACAGATGTAAAACGCGGCATAGCTACTTCCCATGTATCATCTGATAGTTTTATACTTTCAAATTGGTTTCACAACGCTATTCATGGGCCTTTAAGACATGGTGTAGGTAGACACAGTCTTTCTTCACAAGCTGGTGCAAGAAGTGGTGAGGAAGATGACTTAGAAGATGGATTTTCGGAACTCGAATCACCTGAAAAATTAAAGCCAATTCAAACTGCTGATTTAGAGGAAGATGACATGTTCATTTCTGATCCAGAACTCATTGAAGATGGTGATGGTGATTCAGCAGGGATCTCTCAAAATGATCTAGATTTATCTGAGGCTATGGATGATGTGGATGAAAAGAGACCAATAAATAGAAGGGTTCACTCGGAACTGTTTCAGGCCATAATGAGTAGTCCAGGCTTGTCTATCCATAATGTTCTTGATAAATGGGTGAGAGAAGGAAAGGATTTAAACAGATCTGAGATATCATTAACCATGTCTAATCTCCGTAAACGGCGACTCTATGGAAGGGCATTGCAGTTATCAGAGTGGCTGGAGGCAAATAAGCGTCTTGACTTTATCGAGAGAGATTATGCTTCTCGCATTGACTTGATAGCAAAGGTACGTGGCTTACCAAAGGCTGAACTCTACATTGAGAAAATCCCAAAATCTTTCAGAGGCGAGACAATCTACCGAACACTATTGGCAAATTGTGTTGTTGCCAACAATGTCAAGAAAGCAGAGGACGTATTCAATCAAATGAACGATCTAGGATTTCCAATTACTGCATTTTCTTGCAACCAGTTGCTTCTTCTTTTCAAGCGACACAACAAGAAGAAAATCGCAGACATTTTATCAGTAATGGAGAAAGAAAACGTCAAGCCTTCTCTCTTCACTTATAAGATACTAATTGATGCTAAAGGTCAATCCCATGACATGGTAGGGATGGACCGAGTTATTGAGACGATGAAGACTGATGGCATTGAACCAGACATCAACACACAAGCCATCATGGTTAAGCACTATGCTTCTAGTGGGCTGAAAGAGAGAGCTGTGGAAGTTCTCAGGGAGATTGAGGGAAACGACCTGAATAAGAAGCGTTGGGTTTGCCGTTTCCTGCTCCCTCTCTACGGAGTAATGCAAATGGCTGATGAAGTGGAGAGAGTTTGGAATGTCTGCAAGTCAATCCTCGAATCGAAGAATGCATGTGTGCCATTGTTGCTTGGGGGAAGCTGCACAATATCGAACAAGCCGAAGCAGTATTCAGTCGGATGTTAA

Coding sequence (CDS)

ATGTGGGCTCTTCGTCGAGCTTCTTCGCCTTTCAGCTCCTCGCCAGCAGACTTGCCATGTCTGAAAATTGTGTTACCAATTCTTCATGCGAACCAAGTACTTGGAATTGGAGCTTCATATACTTGTCTTAAATTAGATGCATTGACTACTTGCACAGATGTAAAACGCGGCATAGCTACTTCCCATGTATCATCTGATAGTTTTATACTTTCAAATTGGTTTCACAACGCTATTCATGGGCCTTTAAGACATGGTGTAGGTAGACACAGTCTTTCTTCACAAGCTGGTGCAAGAAGTGGTGAGGAAGATGACTTAGAAGATGGATTTTCGGAACTCGAATCACCTGAAAAATTAAAGCCAATTCAAACTGCTGATTTAGAGGAAGATGACATGTTCATTTCTGATCCAGAACTCATTGAAGATGGTGATGGTGATTCAGCAGGGATCTCTCAAAATGATCTAGATTTATCTGAGGCTATGGATGATGTGGATGAAAAGAGACCAATAAATAGAAGGGTTCACTCGGAACTGTTTCAGGCCATAATGAGTAGTCCAGGCTTGTCTATCCATAATGTTCTTGATAAATGGGTGAGAGAAGGAAAGGATTTAAACAGATCTGAGATATCATTAACCATGTCTAATCTCCGTAAACGGCGACTCTATGGAAGGGCATTGCAGTTATCAGAGTGGCTGGAGGCAAATAAGCGTCTTGACTTTATCGAGAGAGATTATGCTTCTCGCATTGACTTGATAGCAAAGGTACGTGGCTTACCAAAGGCTGAACTCTACATTGAGAAAATCCCAAAATCTTTCAGAGGCGAGACAATCTACCGAACACTATTGGCAAATTGTGTTGTTGCCAACAATGTCAAGAAAGCAGAGGACGTATTCAATCAAATGAACGATCTAGGATTTCCAATTACTGCATTTTCTTGCAACCAGTTGCTTCTTCTTTTCAAGCGACACAACAAGAAGAAAATCGCAGACATTTTATCAGTAATGGAGAAAGAAAACGTCAAGCCTTCTCTCTTCACTTATAAGATACTAATTGATGCTAAAGGTCAATCCCATGACATGGTAGGGATGGACCGAGTTATTGAGACGATGAAGACTGATGGCATTGAACCAGACATCAACACACAAGCCATCATGGTTAAGCACTATGCTTCTAGTGGGCTGAAAGAGAGAGCTGTGGAAGTTCTCAGGGAGATTGAGGGAAACGACCTGAATAAGAAGCGTTGGGTTTGCCGTTTCCTGCTCCCTCTCTACGGAGTAATGCAAATGGCTGATGAAGTGGAGAGAGTTTGGAATGTCTGCAAGTCAATCCTCGAATCGAAGAATGCATGTGTGCCATTGTTGCTTGGGGGAAGCTGCACAATATCGAACAAGCCGAAGCAGTATTCAGTCGGATGTTAA

Protein sequence

MWALRRASSPFSSSPADLPCLKIVLPILHANQVLGIGASYTCLKLDALTTCTDVKRGIATSHVSSDSFILSNWFHNAIHGPLRHGVGRHSLSSQAGARSGEEDDLEDGFSELESPEKLKPIQTADLEEDDMFISDPELIEDGDGDSAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQAIMSSPGLSIHNVLDKWVREGKDLNRSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKVRGLPKAELYIEKIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQMNDLGFPITAFSCNQLLLLFKRHNKKKIADILSVMEKENVKPSLFTYKILIDAKGQSHDMVGMDRVIETMKTDGIEPDINTQAIMVKHYASSGLKERAVEVLREIEGNDLNKKRWVCRFLLPLYGVMQMADEVERVWNVCKSILESKNACVPLLLGGSCTISNKPKQYSVGC

Homology

[Close]

BLAST of Lag0011988.1 vs. NCBI nr
Match: XP_022932852.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 703.4 bits (1814), Expect = 1.4e-198
Identity = 365/442 (82.58%), Postives = 388/442 (87.78%), Query Frame = 0


Query: 1   MWALRRASSPFSSSPADLPCLKIVLPILHANQVLGIGASYTCLKLDALTTCTDVKRGIAT 60
           MWA+RRAS+P                    NQV GIGASYT L+LD LT CTDVKRG+AT
Sbjct: 1   MWAIRRASTPI------------------RNQVFGIGASYTFLRLDGLTACTDVKRGMAT 60

Query: 61  SHVSSDSFILSNWFHNAIHGPLRHGVGRHSLSSQAGAR-SGEEDDLEDGFSELESPEKLK 120
           SHVSSDS +LSNWFH AIHGP RHGV R SLSSQAG R SGEEDDLEDGFSELE PEK+ 
Sbjct: 61  SHVSSDSCLLSNWFHYAIHGPSRHGVDRRSLSSQAGPRSSGEEDDLEDGFSELE-PEKIT 120

Query: 121 PIQTADLEEDDMFISDPELIEDGDGDSAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQ 180
           P QTA  EEDDMFI DPELIED  GDS G SQNDLDLSEA+DD DEKRPINRR +SELFQ
Sbjct: 121 PTQTA--EEDDMFI-DPELIEDDAGDSVGPSQNDLDLSEAIDDADEKRPINRRAYSELFQ 180

Query: 181 AIMSSPGLSIHNVLDKWVREGKDLNRSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDF 240
           AIMSSPGLSIHNVLDKWV EGK+LNRSEISLTM NLRKRRLYGRALQLSEWLEANK+ DF
Sbjct: 181 AIMSSPGLSIHNVLDKWVAEGKELNRSEISLTMLNLRKRRLYGRALQLSEWLEANKQFDF 240

Query: 241 IERDYASRIDLIAKVRGLPKAELYIEKIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQ 300
           IERDYAS IDLIAKVRGL +AE Y+EKIPKSFRGETIYRTLLANCV+ANNVKKAEDVFN+
Sbjct: 241 IERDYASHIDLIAKVRGLLRAEHYVEKIPKSFRGETIYRTLLANCVIANNVKKAEDVFNK 300

Query: 301 MNDLGFPITAFSCNQLLLLFKRHNKKKIADILSVMEKENVKPSLFTYKILIDAKGQSHDM 360
           + DLGFPITAFSCNQLLLL+KRH+KKKIADIL VMEKENVKP+LFTYKILIDAKG+SHDM
Sbjct: 301 IKDLGFPITAFSCNQLLLLYKRHHKKKIADILLVMEKENVKPTLFTYKILIDAKGRSHDM 360

Query: 361 VGMDRVIETMKTDGIEPDINTQAIMVKHYASSGLKERAVEVLREIEGNDLNKKRWVCRFL 420
           VGMD+VIETMK DGIEPDINTQAIMVKHYA SGLKERAVEVL+EIEGNDLN+KRWVCRFL
Sbjct: 361 VGMDQVIETMKADGIEPDINTQAIMVKHYAYSGLKERAVEVLKEIEGNDLNEKRWVCRFL 420

Query: 421 LPLYGVMQMADEVERVWNVCKS 442
           LPLYGVMQM DEVER+WNVCKS
Sbjct: 421 LPLYGVMQMTDEVERIWNVCKS 420

[Close]

BLAST of Lag0011988.1 vs. NCBI nr
Match: XP_023544764.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 701.0 bits (1808), Expect = 6.7e-198
Identity = 363/442 (82.13%), Postives = 387/442 (87.56%), Query Frame = 0


Query: 1   MWALRRASSPFSSSPADLPCLKIVLPILHANQVLGIGASYTCLKLDALTTCTDVKRGIAT 60
           MWA+RRAS+P                    NQV GIGASYT L+LD LT CTDVKRG+AT
Sbjct: 1   MWAIRRASTPI------------------RNQVFGIGASYTFLRLDGLTACTDVKRGMAT 60

Query: 61  SHVSSDSFILSNWFHNAIHGPLRHGVGRHSLSSQAGAR-SGEEDDLEDGFSELESPEKLK 120
           SHVSSDS +LSNWFH AIHGP RHGV R SLSSQAG R SGEEDDLEDGFSELE PEK+ 
Sbjct: 61  SHVSSDSCLLSNWFHYAIHGPSRHGVDRRSLSSQAGPRSSGEEDDLEDGFSELE-PEKIT 120

Query: 121 PIQTADLEEDDMFISDPELIEDGDGDSAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQ 180
           P QTA  EEDDMFI DPELIED  GDS G SQNDLDLSEA+DD DEKRPINRR +SELFQ
Sbjct: 121 PTQTA--EEDDMFI-DPELIEDDAGDSVGPSQNDLDLSEAIDDADEKRPINRRAYSELFQ 180

Query: 181 AIMSSPGLSIHNVLDKWVREGKDLNRSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDF 240
           AIMSSPGLSIHNVLDKWV EGK+LNRSEISL M NLRKRRLYGRALQLSEWLEANK+ DF
Sbjct: 181 AIMSSPGLSIHNVLDKWVAEGKELNRSEISLAMLNLRKRRLYGRALQLSEWLEANKQFDF 240

Query: 241 IERDYASRIDLIAKVRGLPKAELYIEKIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQ 300
           IERDYAS IDLIAKVRGL +AE Y+EKIPKSFRGETIYRTLLANCV+ANNVKKAEDVFN+
Sbjct: 241 IERDYASHIDLIAKVRGLLRAEHYVEKIPKSFRGETIYRTLLANCVIANNVKKAEDVFNK 300

Query: 301 MNDLGFPITAFSCNQLLLLFKRHNKKKIADILSVMEKENVKPSLFTYKILIDAKGQSHDM 360
           + DLGFPITAFSCNQLLLL+KRH+KKKIADIL VMEKENVKP+LFTYKIL+DAKG+SHDM
Sbjct: 301 IKDLGFPITAFSCNQLLLLYKRHHKKKIADILLVMEKENVKPTLFTYKILVDAKGRSHDM 360

Query: 361 VGMDRVIETMKTDGIEPDINTQAIMVKHYASSGLKERAVEVLREIEGNDLNKKRWVCRFL 420
           VGMD+VIETMK DGIEPDINTQAIMVKHYA SGLKERAVEVL+EIEGNDLN+KRWVCRFL
Sbjct: 361 VGMDQVIETMKADGIEPDINTQAIMVKHYAYSGLKERAVEVLKEIEGNDLNEKRWVCRFL 420

Query: 421 LPLYGVMQMADEVERVWNVCKS 442
           LPLYGVMQM DEVER+WNVCKS
Sbjct: 421 LPLYGVMQMTDEVERIWNVCKS 420

[Close]

BLAST of Lag0011988.1 vs. NCBI nr
Match: XP_022967740.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 698.7 bits (1802), Expect = 3.3e-197
Identity = 361/441 (81.86%), Postives = 386/441 (87.53%), Query Frame = 0


Query: 1   MWALRRASSPFSSSPADLPCLKIVLPILHANQVLGIGASYTCLKLDALTTCTDVKRGIAT 60
           MWA+RRAS+P                    NQV GIGASYT L+LD LT CTDVKRG+AT
Sbjct: 1   MWAIRRASTPI------------------RNQVFGIGASYTFLRLDGLTACTDVKRGMAT 60

Query: 61  SHVSSDSFILSNWFHNAIHGPLRHGVGRHSLSSQAGAR-SGEEDDLEDGFSELESPEKLK 120
           SHVSSDS++LSNWFH  IHGP RHGV R SLSSQAG R SGEEDDLEDGFSELE PEK+ 
Sbjct: 61  SHVSSDSYLLSNWFHYVIHGPSRHGVDRRSLSSQAGPRSSGEEDDLEDGFSELE-PEKIM 120

Query: 121 PIQTADLEEDDMFISDPELIEDGDGDSAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQ 180
           P QTA   EDDMF+ DPELIED DGDS G SQNDLDLSEA DD DEKR INRR +SELFQ
Sbjct: 121 PTQTA--VEDDMFV-DPELIEDDDGDSVGPSQNDLDLSEATDDTDEKRLINRRAYSELFQ 180

Query: 181 AIMSSPGLSIHNVLDKWVREGKDLNRSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDF 240
           AIMSSPGLSIHNVLDKWV EGKDLNRSEISLTM NLRKRRLYGRALQLSEWLEANK+ DF
Sbjct: 181 AIMSSPGLSIHNVLDKWVAEGKDLNRSEISLTMLNLRKRRLYGRALQLSEWLEANKQFDF 240

Query: 241 IERDYASRIDLIAKVRGLPKAELYIEKIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQ 300
           IERDYAS IDLIAKVRGLP+AE Y+EKIPKSFRGETIYRTLLANCVVANNVKKAEDVF +
Sbjct: 241 IERDYASHIDLIAKVRGLPRAEHYVEKIPKSFRGETIYRTLLANCVVANNVKKAEDVFTK 300

Query: 301 MNDLGFPITAFSCNQLLLLFKRHNKKKIADILSVMEKENVKPSLFTYKILIDAKGQSHDM 360
           + DLGFPITAFSCNQLLLL+KRH+KKKIADIL VM+K+NVKP+LFTYKILIDAKG+SHDM
Sbjct: 301 IKDLGFPITAFSCNQLLLLYKRHHKKKIADILLVMKKDNVKPTLFTYKILIDAKGRSHDM 360

Query: 361 VGMDRVIETMKTDGIEPDINTQAIMVKHYASSGLKERAVEVLREIEGNDLNKKRWVCRFL 420
           VGMD+VIETMK DGIEPDINTQAIMVKHYASSGLKERAVEVL+EIEGNDLN+KRWVCRFL
Sbjct: 361 VGMDQVIETMKADGIEPDINTQAIMVKHYASSGLKERAVEVLKEIEGNDLNEKRWVCRFL 419

Query: 421 LPLYGVMQMADEVERVWNVCK 441
           LPLYGVMQM DEVER+WNVC+
Sbjct: 421 LPLYGVMQMTDEVERIWNVCE 419

[Close]

BLAST of Lag0011988.1 vs. NCBI nr
Match: KAG6603307.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 698.4 bits (1801), Expect = 4.4e-197
Identity = 363/442 (82.13%), Postives = 387/442 (87.56%), Query Frame = 0


Query: 1   MWALRRASSPFSSSPADLPCLKIVLPILHANQVLGIGASYTCLKLDALTTCTDVKRGIAT 60
           MWA+RRAS+P                    NQV GIGASYT L+LD LT CTDVKRG+AT
Sbjct: 1   MWAIRRASTPI------------------RNQVFGIGASYTFLRLDGLTACTDVKRGMAT 60

Query: 61  SHVSSDSFILSNWFHNAIHGPLRHGVGRHSLSSQAGAR-SGEEDDLEDGFSELESPEKLK 120
           SHVSSDS +LSNWFH AIHGP RHGV R SLSSQAG R SGEEDDLEDGFSELE PEK+ 
Sbjct: 61  SHVSSDSCLLSNWFHYAIHGPSRHGVDRRSLSSQAGPRSSGEEDDLEDGFSELE-PEKIT 120

Query: 121 PIQTADLEEDDMFISDPELIEDGDGDSAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQ 180
           P QTA  EEDDMFI DPELIED  GDS G SQN LDLSEA+DD DEKRPINRR +SELFQ
Sbjct: 121 PTQTA--EEDDMFI-DPELIEDDAGDSVGPSQNVLDLSEAIDDADEKRPINRRAYSELFQ 180

Query: 181 AIMSSPGLSIHNVLDKWVREGKDLNRSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDF 240
           AIMSSPGLSIHNVLDKWV EGK+LNRSEISLTM NLRKRRLYGRALQLSEWLEANK+ DF
Sbjct: 181 AIMSSPGLSIHNVLDKWVAEGKELNRSEISLTMLNLRKRRLYGRALQLSEWLEANKQFDF 240

Query: 241 IERDYASRIDLIAKVRGLPKAELYIEKIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQ 300
           IERDYAS IDLIAKVRGL +AE Y+EKIPKSFRGETIYRTLLANCV+ANNVKKAEDVFN+
Sbjct: 241 IERDYASHIDLIAKVRGLLRAEHYVEKIPKSFRGETIYRTLLANCVIANNVKKAEDVFNK 300

Query: 301 MNDLGFPITAFSCNQLLLLFKRHNKKKIADILSVMEKENVKPSLFTYKILIDAKGQSHDM 360
           + DLGFPITAFSCNQLLLL+KRH+KKKIADIL VMEKENVKP+LFTYKILIDAKG+SHD+
Sbjct: 301 IKDLGFPITAFSCNQLLLLYKRHHKKKIADILLVMEKENVKPTLFTYKILIDAKGRSHDI 360

Query: 361 VGMDRVIETMKTDGIEPDINTQAIMVKHYASSGLKERAVEVLREIEGNDLNKKRWVCRFL 420
           VGMD+VIETMK DGIEPDINTQAIMVKHYA SGLKERAVEVL+EIEGNDLN+KRWVCRFL
Sbjct: 361 VGMDQVIETMKADGIEPDINTQAIMVKHYAYSGLKERAVEVLKEIEGNDLNEKRWVCRFL 420

Query: 421 LPLYGVMQMADEVERVWNVCKS 442
           LPLYGVMQM DEVER+WNVCKS
Sbjct: 421 LPLYGVMQMTDEVERIWNVCKS 420

[Close]

BLAST of Lag0011988.1 vs. NCBI nr
Match: XP_022153925.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Momordica charantia])

HSP 1 Score: 696.8 bits (1797), Expect = 1.3e-196
Identity = 354/411 (86.13%), Postives = 374/411 (91.00%), Query Frame = 0


Query: 31  NQVLGIGASYTCLKLDALTTCTDVKRGIATSHVSSDSFILSNWFHNAIHGPLRHGVGRHS 90
           NQVLG+GASYTCLKLDALTTC DV   IATSHV SDSF +SNWFHN  HG   HGV R  
Sbjct: 13  NQVLGVGASYTCLKLDALTTCADVNHSIATSHVLSDSFRISNWFHNVAHGHSNHGVDRRC 72

Query: 91  LSSQAGAR-SGEEDDLEDGFSELESPEKLKPIQTADLEEDDMFISDPELIEDGDGDSAGI 150
           LSS+AGAR SGEED+LEDGFSELESP K+KPIQ ADLE+D++FISDP L +D D DSAG 
Sbjct: 73  LSSRAGARSSGEEDELEDGFSELESPPKIKPIQAADLEDDELFISDP-LTDDDDRDSAGP 132

Query: 151 SQNDLDLSEAMDDVDEKRPINRRVHSELFQAIMSSPGLSIHNVLDKWVREGKDLNRSEIS 210
           SQNDLDLSE   DVDE+RP+NRR HSELFQAIMSSPGLSIHNVLDKWVREGKDLNRSEIS
Sbjct: 133 SQNDLDLSETAVDVDERRPLNRRAHSELFQAIMSSPGLSIHNVLDKWVREGKDLNRSEIS 192

Query: 211 LTMSNLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKVRGLPKAELYIEKIPK 270
           LTM NLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKV GLPKAE YIEKIPK
Sbjct: 193 LTMFNLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKVCGLPKAESYIEKIPK 252

Query: 271 SFRGETIYRTLLANCVVANNVKKAEDVFNQMNDLGFPITAFSCNQLLLLFKRHNKKKIAD 330
           S RGETIYRTLLANCVVANNV KAE+VFNQ+ DLGF ITAFSCNQLLLL+KRH+KKKIAD
Sbjct: 253 SCRGETIYRTLLANCVVANNVNKAEEVFNQIKDLGFSITAFSCNQLLLLYKRHHKKKIAD 312

Query: 331 ILSVMEKENVKPSLFTYKILIDAKGQSHDMVGMDRVIETMKTDGIEPDINTQAIMVKHYA 390
           IL VME ENVKPSLFTYKILIDAKGQSHDMVGMD+VIETMK DGIEPDINTQAIMVKHYA
Sbjct: 313 ILLVMENENVKPSLFTYKILIDAKGQSHDMVGMDQVIETMKADGIEPDINTQAIMVKHYA 372

Query: 391 SSGLKERAVEVLREIEGNDLNKKRWVCRFLLPLYGVMQMADEVERVWNVCK 441
           SSGLKERAVE+L+EIEGNDLNKKRWVCRFLLPLYGVMQMADEV+RVW VC+
Sbjct: 373 SSGLKERAVEILKEIEGNDLNKKRWVCRFLLPLYGVMQMADEVQRVWKVCE 422

[Close]

BLAST of Lag0011988.1 vs. ExPASy Swiss-Prot
Match: Q9C977 (Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80270 PE=2 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.7e-98
Identity = 183/357 (51.26%), Postives = 252/357 (70.59%), Query Frame = 0


Query: 86  VGRHSLSSQAGARSG-EEDDLEDGFSELESPEKLKPIQTADLEEDDMFISDPELIEDGDG 145
           +   +LSS AG +S  EEDDLEDGFSELE  +  +   ++D +E  +   + E       
Sbjct: 57  LSNRALSSSAGTKSDQEEDDLEDGFSELEGSKSGQGSTSSDEDEGKLSADEEE------- 116

Query: 146 DSAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQAIMSSPGLSIHNVLDKWVREGKDLN 205
                 + +LDL E     D  R    +  SELF+ I+S+PGLSI + LDKWV EG ++ 
Sbjct: 117 ------EEELDLIE----TDVSRKTVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEIT 176

Query: 206 RSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKVRGLPKAELYI 265
           R EI+  M  LR+RR+YGRALQ+SEWLEANK+++  ERDYASR+DL  K+RGL K E  +
Sbjct: 177 RVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACM 236

Query: 266 EKIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQMNDLGFPITAFSCNQLLLLFKRHNK 325
           +KIPKSF+GE +YRTLLANCV A NVKK+E VFN+M DLGFP++ F+C+Q+LLL KR ++
Sbjct: 237 QKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDR 296

Query: 326 KKIADILSVMEKENVKPSLFTYKILIDAKGQSHDMVGMDRVIETMKTDGIEPDINTQAIM 385
           KKIAD+L +MEKEN+KPSL TYKILID KG ++D+ GM++++ETMK +G+E D  TQA+ 
Sbjct: 297 KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALT 356

Query: 386 VKHYASSGLKERAVEVLREIEGNDLNKKRWVCRFLLPLYGVMQMADEVERVWNVCKS 442
            +HY+ +GLK++A +VL+E+EG  L   R   + LL +Y  +   DEV+R+W +C+S
Sbjct: 357 ARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICES 396

[Close]

BLAST of Lag0011988.1 vs. ExPASy Swiss-Prot
Match: Q9XI21 (Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g15480 PE=2 SV=2)

HSP 1 Score: 354.4 bits (908), Expect = 2.0e-96
Identity = 183/355 (51.55%), Postives = 251/355 (70.70%), Query Frame = 0


Query: 87  GRHSLSSQAGAR-SGEEDDLEDGFSELESPEKLKPIQTADLEEDDMFISDPELIEDGDGD 146
           GR SLSS AGA+ +G++DDLED              +  DL   D   SD E  E+  GD
Sbjct: 63  GRRSLSSDAGAKTTGDDDDLED--------------KNVDLATPDETSSDSEDGEEFSGD 122

Query: 147 SAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQAIMSSPGLSIHNVLDKWVREGKDLNR 206
              I   +L+L       + KRP      SE+F+AI+S  GLS+ + LDKWV +GKD NR
Sbjct: 123 EGDIEGAELELHVP----ESKRP------SEMFKAIVSVSGLSVGSALDKWVEQGKDTNR 182

Query: 207 SEISLTMSNLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKVRGLPKAELYIE 266
            E    M  LRKRR++GRALQ++EWL+ NK+ +  ERDYA R+DLI+KVRG  K E YI+
Sbjct: 183 KEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIK 242

Query: 267 KIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQMNDLGFPITAFSCNQLLLLFKRHNKK 326
            IP+SFRGE +YRTLLAN V  +NV+ AE VFN+M DLGFP++ F+CNQ+L+L+KR +KK
Sbjct: 243 TIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKK 302

Query: 327 KIADILSVMEKENVKPSLFTYKILIDAKGQSHDMVGMDRVIETMKTDGIEPDINTQAIMV 386
           KIAD+L ++EKEN+KP+L TYKILID KG S+D+ GM++++ETMK++G+E D+  +A++ 
Sbjct: 303 KIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIA 362

Query: 387 KHYASSGLKERAVEVLREIEGNDLNKKRWVCRFLLPLYGVMQMADEVERVWNVCK 441
           +HYAS+GLKE+A +VL+E+EG  L + R +C+ LL +YG +Q  DEV RVW +C+
Sbjct: 363 RHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVWKICE 393

[Close]

BLAST of Lag0011988.1 vs. ExPASy Swiss-Prot
Match: Q9LRP6 (Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g15590 PE=1 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.8e-81
Identity = 161/352 (45.74%), Postives = 242/352 (68.75%), Query Frame = 0


Query: 87  GRHSLSSQAGARSGEEDDLEDGFSELESPEKLKPIQTADLEE---DDMFISDPELIEDGD 146
           G H LSS A A+   ++ + +   EL   E+  P+ + D+ E   DD  + +PEL  D D
Sbjct: 67  GIHKLSSIADAKDKGDEVVRE--EELSESEEAVPV-SGDVPEGVVDDDSLFEPELGSDND 126

Query: 147 GDSAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQAIMSSPGLSIHNVLDKWVREGKDL 206
                    DL++ E     D  +P  +R  SEL+++I++    S+ +VL+KWV+EGKDL
Sbjct: 127 ---------DLEIEE-KHSKDGGKPTKKRGQSELYESIVAYK--SVKHVLEKWVKEGKDL 186

Query: 207 NRSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKVRGLPKAELY 266
           +++E++L + NLRKR+ Y   LQL EWL AN + +F E +YAS++DL+AKV  L KAE++
Sbjct: 187 SQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEIF 246

Query: 267 IEKIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQMNDLGFPITAFSCNQLLLLFKRHN 326
           ++ IP+S RGE +YRTLLANCV+ ++V KAED+FN+M +L FP + F+CNQLLLL+  H+
Sbjct: 247 LKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHD 306

Query: 327 KKKIADILSVMEKENVKPSLFTYKILIDAKGQSHDMVGMDRVIETMKTDGIEPDINTQAI 386
           +KKI+D+L +ME+EN+KPS  TY  LI++KG + D+ GM++++ET+K +GIE D   Q+I
Sbjct: 307 RKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQSI 366

Query: 387 MVKHYASSGLKERAVEVLREIEGNDLNKKRWVCRFLLPLYGVMQMADEVERV 436
           + K+Y  +GLKERA ++++EIEG  L +  WVCR LLPLY  +  +D V R+
Sbjct: 367 LAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRL 403

[Close]

BLAST of Lag0011988.1 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 5.4e-33
Identity = 92/262 (35.11%), Postives = 138/262 (52.67%), Query Frame = 0


Query: 185 PGLSIHNVLDKWVREGKDLNRSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDFIERDY 244
           P  SI  VLD W+ +G  +  SE+   +  LRK   +  ALQ+S+W+  ++  +  E D 
Sbjct: 50  PSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVHEISEGDV 109

Query: 245 ASRIDLIAKVRGLPKAELYIEKIPKSFRGETIYRTLLANCVVANNV-KKAEDVFNQMNDL 304
           A R+DLIAKV GL +AE + E IP   R   +Y  LL NC  +  V  KAE VF +M +L
Sbjct: 110 AIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALL-NCYASKKVLHKAEQVFQEMKEL 169

Query: 305 GFPITAFSCNQLLLLFKRHNKKKIAD-ILSVMEKENVKPSLFTYKILIDAKGQSHDMVGM 364
           GF       N +L L+ R  K  + + +L  ME E VKP +FT    + A     D+ GM
Sbjct: 170 GFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGM 229

Query: 365 DRVIETMKTD-GIEPDINTQAIMVKHYASSGLKERAVEVLREIEGN-DLNKKRWVCRFLL 424
           ++ +   + D G+  D  T A     Y  +GL E+A+E+LR+ E   +  K++     L+
Sbjct: 230 EKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLM 289

Query: 425 PLYGVMQMADEVERVWNVCKSI 443
             YG     +EV R+W++ K +
Sbjct: 290 SFYGAAGKKEEVYRLWSLYKEL 310

[Close]

BLAST of Lag0011988.1 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 1.3e-31
Identity = 83/286 (29.02%), Postives = 156/286 (54.55%), Query Frame = 0


Query: 165 EKRPINR--RVHSELFQAIMSSPGLSIHNVLDKWVREGKDLNRSEISLTMSNLRKRRLYG 224
           E+RPI +   ++ ++  ++M  P L   +VL++W + G+ L + E+   +  LRK +   
Sbjct: 59  ERRPIVQWNAIYKKI--SLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRAN 118

Query: 225 RALQLSEWL-EANKRLDFIERDYASRIDLIAKVRGLPKAELYIEKIPKSFRGETIYRTLL 284
           +AL++ +W+    +R      D A ++DLI KVRG+P AE +  ++P++F+   +Y +LL
Sbjct: 119 QALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLL 178

Query: 285 ANCVVANNVKKAEDVFNQMNDLGFPITAFSCNQLLLLFKR-HNKKKIADILSVMEKENVK 344
              V A + +KAE + N M D G+ +     N ++ L+       K+  ++  M++++++
Sbjct: 179 NAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIR 238

Query: 345 PSLFTYKILIDAKGQSHDMVGMDRVIETMKTD-GIEPDINTQAIMVKHYASSGLKERAVE 404
             +++Y I + + G    +  M+ V + MK+D  I P+  T + M   Y   G  E+A +
Sbjct: 239 LDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAED 298

Query: 405 VLREIEGNDLNKKRWVCRFLLPLYGVMQMADEVERVWNVCKSILES 446
            LR++E     + R    +LL LYG +    E+ RVW+V KS++ S
Sbjct: 299 ALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPS 342

[Close]

BLAST of Lag0011988.1 vs. ExPASy TrEMBL
Match: A0A6J1EXX6 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111439392 PE=4 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 6.6e-199
Identity = 365/442 (82.58%), Postives = 388/442 (87.78%), Query Frame = 0


Query: 1   MWALRRASSPFSSSPADLPCLKIVLPILHANQVLGIGASYTCLKLDALTTCTDVKRGIAT 60
           MWA+RRAS+P                    NQV GIGASYT L+LD LT CTDVKRG+AT
Sbjct: 1   MWAIRRASTPI------------------RNQVFGIGASYTFLRLDGLTACTDVKRGMAT 60

Query: 61  SHVSSDSFILSNWFHNAIHGPLRHGVGRHSLSSQAGAR-SGEEDDLEDGFSELESPEKLK 120
           SHVSSDS +LSNWFH AIHGP RHGV R SLSSQAG R SGEEDDLEDGFSELE PEK+ 
Sbjct: 61  SHVSSDSCLLSNWFHYAIHGPSRHGVDRRSLSSQAGPRSSGEEDDLEDGFSELE-PEKIT 120

Query: 121 PIQTADLEEDDMFISDPELIEDGDGDSAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQ 180
           P QTA  EEDDMFI DPELIED  GDS G SQNDLDLSEA+DD DEKRPINRR +SELFQ
Sbjct: 121 PTQTA--EEDDMFI-DPELIEDDAGDSVGPSQNDLDLSEAIDDADEKRPINRRAYSELFQ 180

Query: 181 AIMSSPGLSIHNVLDKWVREGKDLNRSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDF 240
           AIMSSPGLSIHNVLDKWV EGK+LNRSEISLTM NLRKRRLYGRALQLSEWLEANK+ DF
Sbjct: 181 AIMSSPGLSIHNVLDKWVAEGKELNRSEISLTMLNLRKRRLYGRALQLSEWLEANKQFDF 240

Query: 241 IERDYASRIDLIAKVRGLPKAELYIEKIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQ 300
           IERDYAS IDLIAKVRGL +AE Y+EKIPKSFRGETIYRTLLANCV+ANNVKKAEDVFN+
Sbjct: 241 IERDYASHIDLIAKVRGLLRAEHYVEKIPKSFRGETIYRTLLANCVIANNVKKAEDVFNK 300

Query: 301 MNDLGFPITAFSCNQLLLLFKRHNKKKIADILSVMEKENVKPSLFTYKILIDAKGQSHDM 360
           + DLGFPITAFSCNQLLLL+KRH+KKKIADIL VMEKENVKP+LFTYKILIDAKG+SHDM
Sbjct: 301 IKDLGFPITAFSCNQLLLLYKRHHKKKIADILLVMEKENVKPTLFTYKILIDAKGRSHDM 360

Query: 361 VGMDRVIETMKTDGIEPDINTQAIMVKHYASSGLKERAVEVLREIEGNDLNKKRWVCRFL 420
           VGMD+VIETMK DGIEPDINTQAIMVKHYA SGLKERAVEVL+EIEGNDLN+KRWVCRFL
Sbjct: 361 VGMDQVIETMKADGIEPDINTQAIMVKHYAYSGLKERAVEVLKEIEGNDLNEKRWVCRFL 420

Query: 421 LPLYGVMQMADEVERVWNVCKS 442
           LPLYGVMQM DEVER+WNVCKS
Sbjct: 421 LPLYGVMQMTDEVERIWNVCKS 420

[Close]

BLAST of Lag0011988.1 vs. ExPASy TrEMBL
Match: A0A6J1HVB1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111467173 PE=4 SV=1)

HSP 1 Score: 698.7 bits (1802), Expect = 1.6e-197
Identity = 361/441 (81.86%), Postives = 386/441 (87.53%), Query Frame = 0


Query: 1   MWALRRASSPFSSSPADLPCLKIVLPILHANQVLGIGASYTCLKLDALTTCTDVKRGIAT 60
           MWA+RRAS+P                    NQV GIGASYT L+LD LT CTDVKRG+AT
Sbjct: 1   MWAIRRASTPI------------------RNQVFGIGASYTFLRLDGLTACTDVKRGMAT 60

Query: 61  SHVSSDSFILSNWFHNAIHGPLRHGVGRHSLSSQAGAR-SGEEDDLEDGFSELESPEKLK 120
           SHVSSDS++LSNWFH  IHGP RHGV R SLSSQAG R SGEEDDLEDGFSELE PEK+ 
Sbjct: 61  SHVSSDSYLLSNWFHYVIHGPSRHGVDRRSLSSQAGPRSSGEEDDLEDGFSELE-PEKIM 120

Query: 121 PIQTADLEEDDMFISDPELIEDGDGDSAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQ 180
           P QTA   EDDMF+ DPELIED DGDS G SQNDLDLSEA DD DEKR INRR +SELFQ
Sbjct: 121 PTQTA--VEDDMFV-DPELIEDDDGDSVGPSQNDLDLSEATDDTDEKRLINRRAYSELFQ 180

Query: 181 AIMSSPGLSIHNVLDKWVREGKDLNRSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDF 240
           AIMSSPGLSIHNVLDKWV EGKDLNRSEISLTM NLRKRRLYGRALQLSEWLEANK+ DF
Sbjct: 181 AIMSSPGLSIHNVLDKWVAEGKDLNRSEISLTMLNLRKRRLYGRALQLSEWLEANKQFDF 240

Query: 241 IERDYASRIDLIAKVRGLPKAELYIEKIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQ 300
           IERDYAS IDLIAKVRGLP+AE Y+EKIPKSFRGETIYRTLLANCVVANNVKKAEDVF +
Sbjct: 241 IERDYASHIDLIAKVRGLPRAEHYVEKIPKSFRGETIYRTLLANCVVANNVKKAEDVFTK 300

Query: 301 MNDLGFPITAFSCNQLLLLFKRHNKKKIADILSVMEKENVKPSLFTYKILIDAKGQSHDM 360
           + DLGFPITAFSCNQLLLL+KRH+KKKIADIL VM+K+NVKP+LFTYKILIDAKG+SHDM
Sbjct: 301 IKDLGFPITAFSCNQLLLLYKRHHKKKIADILLVMKKDNVKPTLFTYKILIDAKGRSHDM 360

Query: 361 VGMDRVIETMKTDGIEPDINTQAIMVKHYASSGLKERAVEVLREIEGNDLNKKRWVCRFL 420
           VGMD+VIETMK DGIEPDINTQAIMVKHYASSGLKERAVEVL+EIEGNDLN+KRWVCRFL
Sbjct: 361 VGMDQVIETMKADGIEPDINTQAIMVKHYASSGLKERAVEVLKEIEGNDLNEKRWVCRFL 419

Query: 421 LPLYGVMQMADEVERVWNVCK 441
           LPLYGVMQM DEVER+WNVC+
Sbjct: 421 LPLYGVMQMTDEVERIWNVCE 419

[Close]

BLAST of Lag0011988.1 vs. ExPASy TrEMBL
Match: A0A6J1DI83 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111021326 PE=4 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 6.1e-197
Identity = 354/411 (86.13%), Postives = 374/411 (91.00%), Query Frame = 0


Query: 31  NQVLGIGASYTCLKLDALTTCTDVKRGIATSHVSSDSFILSNWFHNAIHGPLRHGVGRHS 90
           NQVLG+GASYTCLKLDALTTC DV   IATSHV SDSF +SNWFHN  HG   HGV R  
Sbjct: 13  NQVLGVGASYTCLKLDALTTCADVNHSIATSHVLSDSFRISNWFHNVAHGHSNHGVDRRC 72

Query: 91  LSSQAGAR-SGEEDDLEDGFSELESPEKLKPIQTADLEEDDMFISDPELIEDGDGDSAGI 150
           LSS+AGAR SGEED+LEDGFSELESP K+KPIQ ADLE+D++FISDP L +D D DSAG 
Sbjct: 73  LSSRAGARSSGEEDELEDGFSELESPPKIKPIQAADLEDDELFISDP-LTDDDDRDSAGP 132

Query: 151 SQNDLDLSEAMDDVDEKRPINRRVHSELFQAIMSSPGLSIHNVLDKWVREGKDLNRSEIS 210
           SQNDLDLSE   DVDE+RP+NRR HSELFQAIMSSPGLSIHNVLDKWVREGKDLNRSEIS
Sbjct: 133 SQNDLDLSETAVDVDERRPLNRRAHSELFQAIMSSPGLSIHNVLDKWVREGKDLNRSEIS 192

Query: 211 LTMSNLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKVRGLPKAELYIEKIPK 270
           LTM NLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKV GLPKAE YIEKIPK
Sbjct: 193 LTMFNLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKVCGLPKAESYIEKIPK 252

Query: 271 SFRGETIYRTLLANCVVANNVKKAEDVFNQMNDLGFPITAFSCNQLLLLFKRHNKKKIAD 330
           S RGETIYRTLLANCVVANNV KAE+VFNQ+ DLGF ITAFSCNQLLLL+KRH+KKKIAD
Sbjct: 253 SCRGETIYRTLLANCVVANNVNKAEEVFNQIKDLGFSITAFSCNQLLLLYKRHHKKKIAD 312

Query: 331 ILSVMEKENVKPSLFTYKILIDAKGQSHDMVGMDRVIETMKTDGIEPDINTQAIMVKHYA 390
           IL VME ENVKPSLFTYKILIDAKGQSHDMVGMD+VIETMK DGIEPDINTQAIMVKHYA
Sbjct: 313 ILLVMENENVKPSLFTYKILIDAKGQSHDMVGMDQVIETMKADGIEPDINTQAIMVKHYA 372

Query: 391 SSGLKERAVEVLREIEGNDLNKKRWVCRFLLPLYGVMQMADEVERVWNVCK 441
           SSGLKERAVE+L+EIEGNDLNKKRWVCRFLLPLYGVMQMADEV+RVW VC+
Sbjct: 373 SSGLKERAVEILKEIEGNDLNKKRWVCRFLLPLYGVMQMADEVQRVWKVCE 422

[Close]

BLAST of Lag0011988.1 vs. ExPASy TrEMBL
Match: A0A5B6YHF9 (Putative Pentatricopeptide repeat-containing protein isoform 1 OS=Davidia involucrata OX=16924 GN=Din_000632 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 6.7e-135
Identity = 266/448 (59.38%), Postives = 321/448 (71.65%), Query Frame = 0


Query: 1   MWALRRASSPFSSSPADLPCLKIVLPILHANQVLGIGASYT-CLKLDALTTCTDVKRGIA 60
           MWALRRAS+P                     +   IG S   C K +  + C D K GI 
Sbjct: 1   MWALRRASNPLK------------------KRGFNIGTSRACCAKSEIASCCLDDKAGIG 60

Query: 61  -TSHVSSDSFILSNWFHNAIHGPLRHGVGRHSLSSQAGARSG--EEDDLEDGFSELESPE 120
             + V +D  +    F+       +  +GR S SSQAGA+S   E+DDLEDGFSELESP 
Sbjct: 61  EAAEVIADRSLFLKRFYCTTGDYPKFFMGRRSFSSQAGAKSSGEEDDDLEDGFSELESPA 120

Query: 121 KLKPIQTADLEE--DDMFISDPELIE-DGDGDSAGISQNDLDLSEAMDDVDEKRPINRRV 180
             + I  +++E+  +D  IS+PEL E D + D+    QN+L+LS+A  DV E R   +RV
Sbjct: 121 SAEAILESNVEDENEDELISEPELSEGDDEDDAVEEPQNELELSDAETDVTENRSPRKRV 180

Query: 181 HSELFQAIMSSPGLSIHNVLDKWVREGKDLNRSEISLTMSNLRKRRLYGRALQLSEWLEA 240
            S LF+AI ++PGLS+HNVLDKW  EG DL R+EISL M NLRKRR+YGRALQLSEWLE+
Sbjct: 181 PSALFKAIAAAPGLSVHNVLDKWAEEGNDLTRAEISLAMLNLRKRRMYGRALQLSEWLES 240

Query: 241 NKRLDFIERDYASRIDLIAKVRGLPKAELYIEKIPKSFRGETIYRTLLANCVVANNVKKA 300
            KRLDF+ERDYASR+DLIAKVRGL KAE YIEKIPKSFRGE IYRTLLA CV  NNVKKA
Sbjct: 241 TKRLDFVERDYASRLDLIAKVRGLHKAESYIEKIPKSFRGEVIYRTLLAYCVAINNVKKA 300

Query: 301 EDVFNQMNDLGFPITAFSCNQLLLLFKRHNKKKIADILSVMEKENVKPSLFTYKILIDAK 360
           E+VFN+M DL F IT+F+CNQLLLL+KR +KKKIAD+L +MEKENVKPSLFTY+ILID K
Sbjct: 301 EEVFNKMKDLEFSITSFACNQLLLLYKRIDKKKIADVLLLMEKENVKPSLFTYRILIDTK 360

Query: 361 GQSHDMVGMDRVIETMKTDGIEPDINTQAIMVKHYASSGLKERAVEVLREIEGNDLNKKR 420
           GQS+D+ GMD+++ETMK +GIEPDINTQAIM KHY S GLKE+A  VL+E+EG +L   R
Sbjct: 361 GQSNDITGMDQIVETMKAEGIEPDINTQAIMAKHYVSGGLKEKAEAVLKEMEGGNLKDNR 420

Query: 421 WVCRFLLPLYGVMQMADEVERVWNVCKS 442
           W CR LLPLY  +  ADEV RVW VC+S
Sbjct: 421 WACRALLPLYAALGKADEVGRVWKVCES 430

[Close]

BLAST of Lag0011988.1 vs. ExPASy TrEMBL
Match: A0A5B6YIC8 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_000634 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 1.3e-133
Identity = 263/448 (58.71%), Postives = 322/448 (71.88%), Query Frame = 0


Query: 1   MWALRRASSPFSSSPADLPCLKIVLPILHANQVLGIGASYT-CLKLDALTTCTDVKRGIA 60
           MWALRRAS+P                     +   IG S   C K +  + C D K GI 
Sbjct: 1   MWALRRASNPLK------------------KRGFNIGTSRACCAKSEIASCCLDDKAGIG 60

Query: 61  -TSHVSSDSFILSNWFHNAIHGPLRHGVGRHSLSSQAGARSG--EEDDLEDGFSELESPE 120
             + V +D  +    F+       +  +GR S SSQAGA+S   E+DDLEDGFSELESP 
Sbjct: 61  EAAEVIADRSLFLKRFYCTTGDYPKFFMGRRSFSSQAGAKSSGEEDDDLEDGFSELESPA 120

Query: 121 KLKPIQTADLEE--DDMFISDPELIE-DGDGDSAGISQNDLDLSEAMDDVDEKRPINRRV 180
             + I  +++E+  +D  IS+PEL E D + D+    QN+L+LS+A  DV E R   +RV
Sbjct: 121 SAEAILESNVEDENEDELISEPELSEGDDEDDAVEEPQNELELSDAETDVTENRSPRKRV 180

Query: 181 HSELFQAIMSSPGLSIHNVLDKWVREGKDLNRSEISLTMSNLRKRRLYGRALQLSEWLEA 240
            S LF+AI ++PGLS+HNVLDKW  EG DL R+EISL M NLRKRR+YGRALQLSEWLE+
Sbjct: 181 PSALFKAIAAAPGLSVHNVLDKWAEEGNDLTRAEISLAMLNLRKRRMYGRALQLSEWLES 240

Query: 241 NKRLDFIERDYASRIDLIAKVRGLPKAELYIEKIPKSFRGETIYRTLLANCVVANNVKKA 300
            KRLDF+ERDYASR+DLIAKVRGL KAE YIEKIPKSFRGE IYRTLLA CV  NNVKKA
Sbjct: 241 TKRLDFVERDYASRLDLIAKVRGLHKAESYIEKIPKSFRGEVIYRTLLAYCVAINNVKKA 300

Query: 301 EDVFNQMNDLGFPITAFSCNQLLLLFKRHNKKKIADILSVMEKENVKPSLFTYKILIDAK 360
           E+VFN+M DL F IT+F+CNQLLLL+KR +KKKIAD+L +MEKENVKPSLFTY+ILID K
Sbjct: 301 EEVFNKMKDLEFSITSFACNQLLLLYKRIDKKKIADVLLLMEKENVKPSLFTYRILIDTK 360

Query: 361 GQSHDMVGMDRVIETMKTDGIEPDINTQAIMVKHYASSGLKERAVEVLREIEGNDLNKKR 420
           GQS+D+ GMD+++ETMK +GIEPDI+TQAI+ +HY + GLKE+A  VL+E+EG +L K R
Sbjct: 361 GQSNDITGMDQIVETMKAEGIEPDIDTQAILARHYVAGGLKEKAEAVLKEMEGGNLKKNR 420

Query: 421 WVCRFLLPLYGVMQMADEVERVWNVCKS 442
           W CR LLPLY  +  ADEV RVW VC+S
Sbjct: 421 WACRPLLPLYAGLGKADEVRRVWEVCES 430

[Close]

BLAST of Lag0011988.1 vs. TAIR 10
Match: AT1G80270.1 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 361.3 bits (926), Expect = 1.2e-99
Identity = 183/357 (51.26%), Postives = 252/357 (70.59%), Query Frame = 0


Query: 86  VGRHSLSSQAGARSG-EEDDLEDGFSELESPEKLKPIQTADLEEDDMFISDPELIEDGDG 145
           +   +LSS AG +S  EEDDLEDGFSELE  +  +   ++D +E  +   + E       
Sbjct: 57  LSNRALSSSAGTKSDQEEDDLEDGFSELEGSKSGQGSTSSDEDEGKLSADEEE------- 116

Query: 146 DSAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQAIMSSPGLSIHNVLDKWVREGKDLN 205
                 + +LDL E     D  R    +  SELF+ I+S+PGLSI + LDKWV EG ++ 
Sbjct: 117 ------EEELDLIE----TDVSRKTVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEIT 176

Query: 206 RSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKVRGLPKAELYI 265
           R EI+  M  LR+RR+YGRALQ+SEWLEANK+++  ERDYASR+DL  K+RGL K E  +
Sbjct: 177 RVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACM 236

Query: 266 EKIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQMNDLGFPITAFSCNQLLLLFKRHNK 325
           +KIPKSF+GE +YRTLLANCV A NVKK+E VFN+M DLGFP++ F+C+Q+LLL KR ++
Sbjct: 237 QKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDR 296

Query: 326 KKIADILSVMEKENVKPSLFTYKILIDAKGQSHDMVGMDRVIETMKTDGIEPDINTQAIM 385
           KKIAD+L +MEKEN+KPSL TYKILID KG ++D+ GM++++ETMK +G+E D  TQA+ 
Sbjct: 297 KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALT 356

Query: 386 VKHYASSGLKERAVEVLREIEGNDLNKKRWVCRFLLPLYGVMQMADEVERVWNVCKS 442
            +HY+ +GLK++A +VL+E+EG  L   R   + LL +Y  +   DEV+R+W +C+S
Sbjct: 357 ARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICES 396

[Close]

BLAST of Lag0011988.1 vs. TAIR 10
Match: AT1G80270.2 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 361.3 bits (926), Expect = 1.2e-99
Identity = 183/357 (51.26%), Postives = 252/357 (70.59%), Query Frame = 0


Query: 86  VGRHSLSSQAGARSG-EEDDLEDGFSELESPEKLKPIQTADLEEDDMFISDPELIEDGDG 145
           +   +LSS AG +S  EEDDLEDGFSELE  +  +   ++D +E  +   + E       
Sbjct: 57  LSNRALSSSAGTKSDQEEDDLEDGFSELEGSKSGQGSTSSDEDEGKLSADEEE------- 116

Query: 146 DSAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQAIMSSPGLSIHNVLDKWVREGKDLN 205
                 + +LDL E     D  R    +  SELF+ I+S+PGLSI + LDKWV EG ++ 
Sbjct: 117 ------EEELDLIE----TDVSRKTVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEIT 176

Query: 206 RSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKVRGLPKAELYI 265
           R EI+  M  LR+RR+YGRALQ+SEWLEANK+++  ERDYASR+DL  K+RGL K E  +
Sbjct: 177 RVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACM 236

Query: 266 EKIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQMNDLGFPITAFSCNQLLLLFKRHNK 325
           +KIPKSF+GE +YRTLLANCV A NVKK+E VFN+M DLGFP++ F+C+Q+LLL KR ++
Sbjct: 237 QKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDR 296

Query: 326 KKIADILSVMEKENVKPSLFTYKILIDAKGQSHDMVGMDRVIETMKTDGIEPDINTQAIM 385
           KKIAD+L +MEKEN+KPSL TYKILID KG ++D+ GM++++ETMK +G+E D  TQA+ 
Sbjct: 297 KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALT 356

Query: 386 VKHYASSGLKERAVEVLREIEGNDLNKKRWVCRFLLPLYGVMQMADEVERVWNVCKS 442
            +HY+ +GLK++A +VL+E+EG  L   R   + LL +Y  +   DEV+R+W +C+S
Sbjct: 357 ARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICES 396

[Close]

BLAST of Lag0011988.1 vs. TAIR 10
Match: AT1G80270.3 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 361.3 bits (926), Expect = 1.2e-99
Identity = 183/357 (51.26%), Postives = 252/357 (70.59%), Query Frame = 0


Query: 86  VGRHSLSSQAGARSG-EEDDLEDGFSELESPEKLKPIQTADLEEDDMFISDPELIEDGDG 145
           +   +LSS AG +S  EEDDLEDGFSELE  +  +   ++D +E  +   + E       
Sbjct: 57  LSNRALSSSAGTKSDQEEDDLEDGFSELEGSKSGQGSTSSDEDEGKLSADEEE------- 116

Query: 146 DSAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQAIMSSPGLSIHNVLDKWVREGKDLN 205
                 + +LDL E     D  R    +  SELF+ I+S+PGLSI + LDKWV EG ++ 
Sbjct: 117 ------EEELDLIE----TDVSRKTVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEIT 176

Query: 206 RSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKVRGLPKAELYI 265
           R EI+  M  LR+RR+YGRALQ+SEWLEANK+++  ERDYASR+DL  K+RGL K E  +
Sbjct: 177 RVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACM 236

Query: 266 EKIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQMNDLGFPITAFSCNQLLLLFKRHNK 325
           +KIPKSF+GE +YRTLLANCV A NVKK+E VFN+M DLGFP++ F+C+Q+LLL KR ++
Sbjct: 237 QKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDR 296

Query: 326 KKIADILSVMEKENVKPSLFTYKILIDAKGQSHDMVGMDRVIETMKTDGIEPDINTQAIM 385
           KKIAD+L +MEKEN+KPSL TYKILID KG ++D+ GM++++ETMK +G+E D  TQA+ 
Sbjct: 297 KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALT 356

Query: 386 VKHYASSGLKERAVEVLREIEGNDLNKKRWVCRFLLPLYGVMQMADEVERVWNVCKS 442
            +HY+ +GLK++A +VL+E+EG  L   R   + LL +Y  +   DEV+R+W +C+S
Sbjct: 357 ARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICES 396

[Close]

BLAST of Lag0011988.1 vs. TAIR 10
Match: AT1G15480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 354.4 bits (908), Expect = 1.4e-97
Identity = 183/355 (51.55%), Postives = 251/355 (70.70%), Query Frame = 0


Query: 87  GRHSLSSQAGAR-SGEEDDLEDGFSELESPEKLKPIQTADLEEDDMFISDPELIEDGDGD 146
           GR SLSS AGA+ +G++DDLED              +  DL   D   SD E  E+  GD
Sbjct: 63  GRRSLSSDAGAKTTGDDDDLED--------------KNVDLATPDETSSDSEDGEEFSGD 122

Query: 147 SAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQAIMSSPGLSIHNVLDKWVREGKDLNR 206
              I   +L+L       + KRP      SE+F+AI+S  GLS+ + LDKWV +GKD NR
Sbjct: 123 EGDIEGAELELHVP----ESKRP------SEMFKAIVSVSGLSVGSALDKWVEQGKDTNR 182

Query: 207 SEISLTMSNLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKVRGLPKAELYIE 266
            E    M  LRKRR++GRALQ++EWL+ NK+ +  ERDYA R+DLI+KVRG  K E YI+
Sbjct: 183 KEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIK 242

Query: 267 KIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQMNDLGFPITAFSCNQLLLLFKRHNKK 326
            IP+SFRGE +YRTLLAN V  +NV+ AE VFN+M DLGFP++ F+CNQ+L+L+KR +KK
Sbjct: 243 TIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKK 302

Query: 327 KIADILSVMEKENVKPSLFTYKILIDAKGQSHDMVGMDRVIETMKTDGIEPDINTQAIMV 386
           KIAD+L ++EKEN+KP+L TYKILID KG S+D+ GM++++ETMK++G+E D+  +A++ 
Sbjct: 303 KIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIA 362

Query: 387 KHYASSGLKERAVEVLREIEGNDLNKKRWVCRFLLPLYGVMQMADEVERVWNVCK 441
           +HYAS+GLKE+A +VL+E+EG  L + R +C+ LL +YG +Q  DEV RVW +C+
Sbjct: 363 RHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVWKICE 393

[Close]

BLAST of Lag0011988.1 vs. TAIR 10
Match: AT3G15590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 304.7 bits (779), Expect = 1.3e-82
Identity = 161/352 (45.74%), Postives = 242/352 (68.75%), Query Frame = 0


Query: 87  GRHSLSSQAGARSGEEDDLEDGFSELESPEKLKPIQTADLEE---DDMFISDPELIEDGD 146
           G H LSS A A+   ++ + +   EL   E+  P+ + D+ E   DD  + +PEL  D D
Sbjct: 67  GIHKLSSIADAKDKGDEVVRE--EELSESEEAVPV-SGDVPEGVVDDDSLFEPELGSDND 126

Query: 147 GDSAGISQNDLDLSEAMDDVDEKRPINRRVHSELFQAIMSSPGLSIHNVLDKWVREGKDL 206
                    DL++ E     D  +P  +R  SEL+++I++    S+ +VL+KWV+EGKDL
Sbjct: 127 ---------DLEIEE-KHSKDGGKPTKKRGQSELYESIVAYK--SVKHVLEKWVKEGKDL 186

Query: 207 NRSEISLTMSNLRKRRLYGRALQLSEWLEANKRLDFIERDYASRIDLIAKVRGLPKAELY 266
           +++E++L + NLRKR+ Y   LQL EWL AN + +F E +YAS++DL+AKV  L KAE++
Sbjct: 187 SQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEIF 246

Query: 267 IEKIPKSFRGETIYRTLLANCVVANNVKKAEDVFNQMNDLGFPITAFSCNQLLLLFKRHN 326
           ++ IP+S RGE +YRTLLANCV+ ++V KAED+FN+M +L FP + F+CNQLLLL+  H+
Sbjct: 247 LKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHD 306

Query: 327 KKKIADILSVMEKENVKPSLFTYKILIDAKGQSHDMVGMDRVIETMKTDGIEPDINTQAI 386
           +KKI+D+L +ME+EN+KPS  TY  LI++KG + D+ GM++++ET+K +GIE D   Q+I
Sbjct: 307 RKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQSI 366

Query: 387 MVKHYASSGLKERAVEVLREIEGNDLNKKRWVCRFLLPLYGVMQMADEVERV 436
           + K+Y  +GLKERA ++++EIEG  L +  WVCR LLPLY  +  +D V R+
Sbjct: 367 LAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRL 403

The following BLAST results are available for this feature:

BLAST of Lag0011988.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932852.1	1.4e-198	82.58	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucur...	[more]
XP_023544764.1	6.7e-198	82.13	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucur...	[more]
XP_022967740.1	3.3e-197	81.86	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucur...	[more]
KAG6603307.1	4.4e-197	82.13	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022153925.1	1.3e-196	86.13	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Momor...	[more]

BLAST of Lag0011988.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C977	1.7e-98	51.26	Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidop...	[more]
Q9XI21	2.0e-96	51.55	Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidop...	[more]
Q9LRP6	1.8e-81	45.74	Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidop...	[more]
Q9SKU6	5.4e-33	35.11	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
Q8LPS6	1.3e-31	29.02	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]

BLAST of Lag0011988.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXX6	6.6e-199	82.58	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc...	[more]
A0A6J1HVB1	1.6e-197	81.86	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc...	[more]
A0A6J1DI83	6.1e-197	86.13	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Mom...	[more]
A0A5B6YHF9	6.7e-135	59.38	Putative Pentatricopeptide repeat-containing protein isoform 1 OS=Davidia involu...	[more]
A0A5B6YIC8	1.3e-133	58.71	Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_000634 PE=4 SV=1	[more]

BLAST of Lag0011988.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80270.1	1.2e-99	51.26	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G80270.2	1.2e-99	51.26	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G80270.3	1.2e-99	51.26	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G15480.1	1.4e-97	51.55	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G15590.1	1.3e-82	45.74	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 276..307 e-value: 2.2E-4 score: 19.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 364..407 e-value: 0.0079 score: 16.2 coord: 296..354 e-value: 5.3E-7 score: 29.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 273..452 e-value: 7.7E-25 score: 89.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..126
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 55..441
None	No IPR available	PANTHER	PTHR45717:SF15	OS01G0280400 PROTEIN	coord: 55..441

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0011988	Lag0011988	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0011988.1.exon4	Lag0011988.1.exon4	exon
Lag0011988.1.exon3	Lag0011988.1.exon3	exon
Lag0011988.1.exon2	Lag0011988.1.exon2	exon
Lag0011988.1.exon1	Lag0011988.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0011988.1	cds.Lag0011988.1_4	CDS
cds.Lag0011988.1	cds.Lag0011988.1_3	CDS
cds.Lag0011988.1	cds.Lag0011988.1_2	CDS
cds.Lag0011988.1	cds.Lag0011988.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0011988.1	Lag0011988.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding