Lag0011916.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAACAACAGATCGCGGCGTTCGTGCTTCGTATTGGACGGTGGCGTTCGTGCTTCGTGGTGGACGACGGCGTTCGTGCTTCGTGGTGGACGGCGGCGTTCGTGGCTTCGTGGGAAAGAGAGAATGAGAGAAAGAGAGGGAGGAGTACAGCGCTGAAGAACAAGATTGAAGACTGAGGAGGTGGGCCGAATACGAGAAACCCTAAACCCATTTCCTATTTAAGTTAAAAGTGAGAACCGAATCGAACCGAGTCAGTTCGGTTCGGTTCGGCCTGGATCTATGTAAAAACCGAACCGAACCGAACCGAACTGACTCGGTTCGGTTCGGTTTTTCGGTCCGGTTCGGTTTTTTTCACCCCTAATAAATTATATGATATAGTAAATAATAATTATACAAAATTATTGTTGTTGCCATATCGCGACGCGGAACGACCGACATCCTCTAACAAGGTGGGTTGTAAAGAGGTTTGGAGTCGTCACCAACCATTACTAGGGAGTGATTTGTCACCCATTTAAAAAAGGAAGTGGCCTGCAAAACATAGAGTTTAGGTTCATGAGGCTTTTGTGCGTAGGGAAGGTATTAACACCCGACAACATCCATTAAAAGAAAATAGTTACCAAAATCTCAATTTTCTCACATTATCTCAATTAATCTTAACTAGAGAAAATAGTCCTTATGAGATAAAAAAAAATTGTTTTGTTGATTTTATTTTTAAAATGTCTCAATTTGTCATATCTTAAACTTCAAGAATGAAGTAAACATTTGAACGACTTGAGTGAGGTTATTAGCCATCAATTTATGCAATATTAGAATTATTCTCAATCAATGAGAAAATTCATCGCCTCAAGAGTTTAAGAAATTTTACATGTTTTCTCAAATCGATTGCAACTATTTTAAACTTATTTTTTTATAATTTATTTTAATCATTTTTAGAGGATTTTCATGCACTTTAAAGGGTAATACGAATTTATATTTCAAGCACACTATTCAAAATAAAATTTTGACAGGGATATTTATTTTAGTTGCTAAAACTAAAAATAAAATGCTATTGAAAAGTGTATTATTGAATGAGTTTAATTGCTGAAAAGAACCGATTTTGGGAACTTAAAGAAGTTCAATTAGGCTTGGTAAAATGTGGTGGCTACTTTAAAAACAAGTGTGTTAATGTTATTAAATTAAAAGGTGGAGAAAATGTTTAAAACCCCTTTTATTTAATAGAAAACAAAATGTATTTGAAAAAAAGCTTATCCAAAAACTTTGATAAATTTAAGAAAAAACACATTTTTTTTAATAAAAAGAGTGTGTTATTGAAAAGAGAAATTAGTAGCATTTTGGTTTAAGCATCAATATCTTGTAAACATTTGGTTTTTTTTAAAAAAAACTCCAAGATTTTTTTGAAAGAAAAATTCTATTCTCAATAGAGATTTTTTTTTCTTAACGAACCTTTTACGTAATCATTTTTGTTTTATATAATTTATCAAATTTAAGTTCTGTAAATTATAATACTTTGAGGCGTTTAGGAGGACAATGGTGCAGTCTTGGCAAATCAAGGAGGTGAAGTTTGTAGAGATCGAGGAGAATGTGTTCTTGTTTTGTTCTGTCGATGCATCGTCGATGTTGTATGTGTAGAAGCAAGGCTCATAGCTATTTGATGAGTGTTTGTTGGTGCTTTCCAAATGGAGTCCGAGTATTAGAATGAAAGCGGTCATGCCGAAGAAGTGTGACTTTTGGTTGCAAATTCATGGGCTCCCTTATGATTGTAGGGGCAGGCTTCAACGAGAGTGGTTGGGGAGAGAATAGGGAAAATATCTCGGGGGAGGTGGAATTGCAGGGGGTTCAGCAGCGAAAGTTTATATGCCTGAAGTTGGAGTTGGATGTGACAAAGGCGCTGGTGAGGGGGCCTGATTGTGGTTAGTGAGGGATTAAAGAAGTGGGTATGGTTTAAGTATGAGTGGTTGCCCAAGTTCTGCTCTAGGTGTGGCATAATGGGGCGTACGGTCCAGTGGTGCACTGATAAGAGATCGGAGGAACCCCAATTGGAGCGGGCGTCGTCGATGTTTGGAGAATGGCTGAGGGTTGGACCTCCAGTGTTGAGGCAACATGAAGAACGGGGGAAGCCGTGATGGAAAGATGATCGGGGAAAGGAAAATCAGTCTCCGGTGCCAGAGAACAAACTGAAAGATTTGGGAAAGGATGTTGGCGAGGATCGTAAAGAGATTTTACCTGATTTACCAGGGGTTTCGTGTGAGCAGGTGAACCAAATCCCAGAAGTGGATTCGACATTCGTGAGTCGGATGGATAATCAAGCTAAGAATGGGCCAGTGCAAACTGAGGCCCGAGTTGAAGGAAAGTCAAGAAGAGTATAGTGGGGGCCCACTACGAGAATAGGCCCAAGTGATGAATGGGGGGCTAGAGAAGGGGAGCCATTCAGTTTCTCTAATTGGGCTCAAAAGAAAGTGTCGGTTAGGGAGTAAAGGAAGCCAAGAGGGCAAGGGGAGTGGAGCCATGAAGAGGATGAGATTGCAAGTAGAGACCTAAGAGGGGGAGAAGGCAAAGGAGACCAACCTAAATGGTCTCCCAGCCAGCCATGAGTGTCATTTGTTGGAACTGTCAGGGTATAGGAAACCCCCTGACAGTTCGATCCTTGAAGGAGCAAGCGAAGTTCCATTTCCCAAGTTTGATTTTCCTGTAAAAAACAAGAATAAAGCGACAAAATTGGAAACTATTAGAAGACAGCTGAATTTTGAAGGGTGTTTCACTGTAAAACCGAGAGGAGTTAGAAGGCTTATGTTTACTTTGGAAGGTGGCGGCAGAGGTAGAAGTAACCCAGTTCTCCGACTTTCTGATTGAGACTACAATCAATGTAGTCCTAGGGAAACCAAAATGGCAGTTCCTGGGTTTTTATGCTAACACGAATGATGCAGAGAGGGAACAACAATTCTAGATTATAAGCCAAAGGCTTGCTCAATCGGGAGAAAGTTGCGTAGTCAGTGGAGATTTCAATGATATTTTGAGTAATGGGGAGAAGGAAGGTGGGATCTATTGATCCATGAGTAGCTTTCAAATGTTTTCTAATTTCCTTGCATTAAACAATTTGTTTGATCTGGATTTTTTAGGATATCCCTTTACATGGTCAAACCGAAGGAAGGAGGTTGACTTAGTCAAATTGAGATCGGACCAATTTGTTGGATCAGAGAACTTGTGTGGGGAATGGCCACAGGCAAAGGTGTCCTACCTAACGTCTTTAGGTTCAAACCATCGAATGGTTCTGTTGCAAGTCGCTGGGCTGAGGTTGAAATATCCAAAGCGATTTGTGTATAACCGAGGCTGGAGAGCGAGTCTAGAGTGCAAGCAAGCAATGGAAGGTGCATGGGTTGGGAATGTTGAGGGGAGAGGTGGCTATGTAGTTGTGGAGAAGATACAGAGAACTAGAATGACGATCCTACAGTGGATGAAGAATGCAACAGTGAATTCTGGACAGGAAATAAGGAGGCTTGAGATGACAAAACAGTTTGAATTGGATCGAGTGGTGCCGAATTACCAGGTGATTTCCTAG ATGCAACAACAGATCGCGGCGTTCGTGCTTCGTATTGGACGGTGGCGTTCGTGCTTCGTGGTGGACGACGGCGTTCGTGCTTCGTGGTGGACGGCGGCGTTCGTGGCTTCGTGGGAAAGAGAGAATGAGAGAAAGAGAGGGAGGAGGGCAGGCTTCAACGAGAGTGGTTGGGGAGAGAATAGGGAAAATATCTCGGGGGAGGTGGAATTGCAGGGGGTTCAGCAGCGAAAGTTTATATGCCTGAAGTTGGAGTTGGATGTGACAAAGGCGCTGGTGAGGGGGCCTGATTGTGATGATCGGGGAAAGGAAAATCAGTCTCCGGTGCCAGAGAACAAACTGAAAGATTTGGGAAAGGATGTTGGCGAGGATCGTAAAGAGATTTTACCTGATTTACCAGGGGTTTCGTGTGAGCAGGTGAACCAAATCCCAGAAGTGGATTCGACATTCGTGAGTCGGATGGATAATCAAGCTAAGAATGGGCCAGTGCAAACTGAGGCCCGAGTTGAAGGAAAGAAACCCCCTGACAGTTCGATCCTTGAAGGAGCAAGCGAAGTTCCATTTCCCAAGTTTGATTTTCCTGTAAAAAACAAGAATAAAGCGACAAAATTGGAAACTATTAGAAGACAGCTGAATTTTGAAGGGTGTTTCACTGTAAAACCGAGAGGAGTTAGAAGGCTTATGTTTACTTTGGAAGGTGGCGGCAGAGGATATCCCTTTACATGGTCAAACCGAAGGAAGGAGGTTGACTTAGTCAAATTGAGATCGGACCAATTTGTTGGATCAGAGAACTTGTGTGGGGAATGGCCACAGGCAAAGGTGTCCTACCTAACGTCTTTAGGTTCAAACCATCGAATGGTTCTGTTGCAAGTCGCTGGGCTGAGGTTGAAATATCCAAAGCGATTTGTGTATAACCGAGGCTGGAGAGCGAGTCTAGAGTGCAAGCAAGCAATGGAAGGTGCATGGGTTGGGAATGTTGAGGGGAGAGGTGGCTATGTAGTTGTGGAGAAGATACAGAGAACTAGAATGACGATCCTACAGTGGATGAAGAATGCAACAGTGAATTCTGGACAGGAAATAAGGAGGCTTGAGATGACAAAACAGTTTGAATTGGATCGAGTGGTGCCGAATTACCAGGTGATTTCCTAG ATGCAACAACAGATCGCGGCGTTCGTGCTTCGTATTGGACGGTGGCGTTCGTGCTTCGTGGTGGACGACGGCGTTCGTGCTTCGTGGTGGACGGCGGCGTTCGTGGCTTCGTGGGAAAGAGAGAATGAGAGAAAGAGAGGGAGGAGGGCAGGCTTCAACGAGAGTGGTTGGGGAGAGAATAGGGAAAATATCTCGGGGGAGGTGGAATTGCAGGGGGTTCAGCAGCGAAAGTTTATATGCCTGAAGTTGGAGTTGGATGTGACAAAGGCGCTGGTGAGGGGGCCTGATTGTGATGATCGGGGAAAGGAAAATCAGTCTCCGGTGCCAGAGAACAAACTGAAAGATTTGGGAAAGGATGTTGGCGAGGATCGTAAAGAGATTTTACCTGATTTACCAGGGGTTTCGTGTGAGCAGGTGAACCAAATCCCAGAAGTGGATTCGACATTCGTGAGTCGGATGGATAATCAAGCTAAGAATGGGCCAGTGCAAACTGAGGCCCGAGTTGAAGGAAAGAAACCCCCTGACAGTTCGATCCTTGAAGGAGCAAGCGAAGTTCCATTTCCCAAGTTTGATTTTCCTGTAAAAAACAAGAATAAAGCGACAAAATTGGAAACTATTAGAAGACAGCTGAATTTTGAAGGGTGTTTCACTGTAAAACCGAGAGGAGTTAGAAGGCTTATGTTTACTTTGGAAGGTGGCGGCAGAGGATATCCCTTTACATGGTCAAACCGAAGGAAGGAGGTTGACTTAGTCAAATTGAGATCGGACCAATTTGTTGGATCAGAGAACTTGTGTGGGGAATGGCCACAGGCAAAGGTGTCCTACCTAACGTCTTTAGGTTCAAACCATCGAATGGTTCTGTTGCAAGTCGCTGGGCTGAGGTTGAAATATCCAAAGCGATTTGTGTATAACCGAGGCTGGAGAGCGAGTCTAGAGTGCAAGCAAGCAATGGAAGGTGCATGGGTTGGGAATGTTGAGGGGAGAGGTGGCTATGTAGTTGTGGAGAAGATACAGAGAACTAGAATGACGATCCTACAGTGGATGAAGAATGCAACAGTGAATTCTGGACAGGAAATAAGGAGGCTTGAGATGACAAAACAGTTTGAATTGGATCGAGTGGTGCCGAATTACCAGGTGATTTCCTAG MQQQIAAFVLRIGRWRSCFVVDDGVRASWWTAAFVASWERENERKRGRRAGFNESGWGENRENISGEVELQGVQQRKFICLKLELDVTKALVRGPDCDDRGKENQSPVPENKLKDLGKDVGEDRKEILPDLPGVSCEQVNQIPEVDSTFVSRMDNQAKNGPVQTEARVEGKKPPDSSILEGASEVPFPKFDFPVKNKNKATKLETIRRQLNFEGCFTVKPRGVRRLMFTLEGGGRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRGGYVVVEKIQRTRMTILQWMKNATVNSGQEIRRLEMTKQFELDRVVPNYQVIS Homology
BLAST of Lag0011916.1 vs. NCBI nr
Match: ONI17050.1 (hypothetical protein PRUPE_3G135000 [Prunus persica]) HSP 1 Score: 93.6 bits (231), Expect = 4.0e-15 Identity = 48/148 (32.43%), Postives = 84/148 (56.76%), Query Frame = 0
BLAST of Lag0011916.1 vs. NCBI nr
Match: KAG5563042.1 (hypothetical protein RHGRI_005701 [Rhododendron griersonianum]) HSP 1 Score: 86.7 bits (213), Expect = 4.9e-13 Identity = 50/174 (28.74%), Postives = 83/174 (47.70%), Query Frame = 0
BLAST of Lag0011916.1 vs. NCBI nr
Match: XP_025652024.1 (uncharacterized protein LOC112748031 [Arachis hypogaea]) HSP 1 Score: 83.6 bits (205), Expect = 4.1e-12 Identity = 41/128 (32.03%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of Lag0011916.1 vs. NCBI nr
Match: OMO82636.1 (reverse transcriptase [Corchorus capsularis]) HSP 1 Score: 82.8 bits (203), Expect = 7.0e-12 Identity = 49/174 (28.16%), Postives = 83/174 (47.70%), Query Frame = 0
BLAST of Lag0011916.1 vs. NCBI nr
Match: KAG5514982.1 (hypothetical protein RHGRI_036130 [Rhododendron griersonianum]) HSP 1 Score: 82.0 bits (201), Expect = 1.2e-11 Identity = 41/120 (34.17%), Postives = 63/120 (52.50%), Query Frame = 0
BLAST of Lag0011916.1 vs. ExPASy TrEMBL
Match: M5VH78 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015748mg PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.9e-15 Identity = 48/148 (32.43%), Postives = 84/148 (56.76%), Query Frame = 0
BLAST of Lag0011916.1 vs. ExPASy TrEMBL
Match: A0A251Q0X9 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_3G135000 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.9e-15 Identity = 48/148 (32.43%), Postives = 84/148 (56.76%), Query Frame = 0
BLAST of Lag0011916.1 vs. ExPASy TrEMBL
Match: A0A1R3IJA9 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_11842 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.4e-12 Identity = 49/174 (28.16%), Postives = 83/174 (47.70%), Query Frame = 0
BLAST of Lag0011916.1 vs. ExPASy TrEMBL
Match: A0A5A7P590 (DNAse I-like superfamily protein OS=Striga asiatica OX=4170 GN=STAS_03482 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 5.8e-12 Identity = 46/144 (31.94%), Postives = 76/144 (52.78%), Query Frame = 0
BLAST of Lag0011916.1 vs. ExPASy TrEMBL
Match: A0A5A7NXH9 (RNA-directed DNA polymerase-like protein OS=Striga asiatica OX=4170 GN=STAS_00537 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 7.6e-12 Identity = 36/125 (28.80%), Postives = 69/125 (55.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|