Lag0006379.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0006379.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr6: 41822789 .. 41827099 (+)
Sequence length294
RNA-Seq ExpressionLag0006379.1
SyntenyLag0006379.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAAAGACGGAGAATGGACCTCGAGCTTGCACAGGGCGAGAGACTCGGAAGCGCCGATGATTCTCATGAAGGTTTCGACCGCTTCTTGATTCGACATGGCCATTACTTCGAAAAAGTTCTCGGAAATTTGAGAGAAAGAGAGAAGGGTTTCAGTGGAGAAAGAAAAGGGGTTTCGGTTGAAGAAGATCTGGGGAGGAGGTGGACGACAAGGCAAACCCTAAATTTTCTATTTAAATCAAAAGCGAGAACCGATTCGAACCGAGTCGTTTCAGTTCGATTTTTTTCACCCCTAGGAATTAGTTTAAGTCATGTTGGTCATCTACCTATAATTTAATATGGAAAATTGTAATTTGTGGCTAAATTAAATAAGGAAATAGCAAATATAGCAACTTTTAAAAGAAATTGCAAATATGACAAATATTTTAAATGATTTTTAAAATTTTCCGTTTTACTCCTCATTTGCGTGCATTTTCCACTCCTTTTCTCTAATAAACTTCTATCAACGATAGATTCGATCTATTGTCGATACGATGGAATTCTATCGCTGATAAATTTCTATCAGTGATAGAATTTTATTATTGATAGTTTATCAGCGATAGACTTCTATTGCCGACAAAATTCAAATATTTTAAATGTTTTTTTAGATTTCCGTTTTACCCCTCATTTGATTTTAACGTGCACTTTTCCCTTCTTCTTCGTTTTTTCCTTTTCTCTGATATGACTCTATCAGCGATAGAATTCAAATATTTTTAATGCTTTTTTTTTATAATTCTATCGCTGGTAGAAGTCTATTAAAGAAAATAAAAAAATAGAGGAGGGAAAAATGAAGAAAAAAGGGAAAATGCGTGCTAAAATCAAATGAGGAGTAAAATGAGAATTAAAAAAAAATCATTAAAAATATTTGAATTCTATCTGTGATAGAAGTCTATGAGCGATAGAATTATAGATTTCTATCCGTGATAATAGAATTCTACCGCTATCGCTGCCTATCAGCGATGGAATTCTATGGCTGATAGAAGGGTATTTTGGTAATTTAGACAGCCTGAAGGTAATTTTTTTTTGTCATTTTTGCAATTATTTTTCAAGGTTGCTATATTTGCTAATATTTTGACTCATTTTGTTATCTATGCAACTGACCCATTTAATATCCTATTGGTTGTTGCTCGGGTAACTAGGATATTAAATCCCATGAGAATAGTAGAGGTATAGGGCCTGGACACTTACATCTACAAAAGAAAACGTAGAAAAAGGTGAAATTACTATTTTAGTTCATATAGTTTTTAGCTTTTTTTAAATTTCAATGCTTGTGAGGGTGTGACAAATAGAATCATCGAAAATGATAATTGGTGTCTTATCGACTGAGTTATATTCGAATTGACACTTCAATTTTAATTTTGTTCGTATAGTATGAAAATTTTCATTATTATTAGTTTTAGTAATTATATAAGTGTCTTTATCCATAAAATTTGGGAACATGTTTCTGAAAACCTCTGAAAAAGAAGGTAGAAGAAGGAGAGGAGGATTGGAGTTAAGAAAAAGCAAAGGAATGGGAAGAAGGTTATGCAGAGCTGCAAAGATAAGATCTGAACTGAAAACAAAACAAAAAACAAAACAAAAACAGCTGAAGAAGCAAACTTGTATGTACCGTAAGTAAGTTGCATGCATGGTCGCAAAATTAACTTCTCTCTCTTCTACTCTACCATGTCTTGAAACAATCAAATATTGGAAAACACAATATTCAATGTTGGTACATTGCTTGTCACAAAAAAGATCTTTCTAATATTTGCCTTTTCAGAGTTATTTACATAAAAAAAAACACAACCCACCTTTGTGATTGTCAAAAGACCAAAAAACCACTCCAAACAAAATTGGCTTGAGTTACTTATGTCATTCAACTTAAAACAAATTGTCTCGCAAACCAAGAATTTATTAGACACAAAATTAAAAGTTAAGGTCATGTCGAATAACCATTTAGTTTTTTGTTTTTGGTTTTGGAAAATTAAGCAAATAAATACTATTTCTTTGTTTTTCCTAATACCTTCTTTCCATGTTTTCAAAAACCAACCCAATTTGTGAAAACTAAAAAAAGGAGTTTTCAAAAACTTTTTTTTTTTTTTTTTTTTTAATTTGGCTAGGAATTCAATTGTATTCATGACAAACATGAAAAGCATGACAAAGAAATTGAGAGAAAACATGCAAAAATTTTCAAGAACCAAAAACTAAAAACCAAATGATTATCAAACAGGGCCTAAAAGAATCTACTAACTACAACAAACTTGGGTTAAAAATATATTGAATATAACTCTAAAAATCTAAGGACCAAACTTATTAATTAATCCTTAAAAAAAAAAAAAAACTTATTAATGAATCACCATAAAATTTTCAATTAATTATGGTAGCACAAAACACTTATTTATGAAGAGAATTTTATAGTGAAAACCGCAAGAGTAAATATTACCAGTATATTAAATTTGGTTAAAAATCATTTTTTGTCCCTGAACTTTCATCAAAGTAACAATTTAGTTTCTAAACTTTGATATGTGACGATTTAGTCTCTATATTTTTAATTTTGTAACAAATTAGTTCCTGAACTTTCATATGTAACAAGTTAAGTCCTTGTACTTTAAAATTTATAATGATTTAGTCCCTATTGTGAAAACTAGCGTTAACATTTAATGAAATTTATTACATAGACAAATCAATAAACTAACTTGAGACCTAATATGTTTATAAGTTATAAAGTCAAATCATTAAATAATAAAAATCAATAACTTGGGACCCAATATGTTTACAAGTTATAAAGTCAAATCATTAAATAATAAAAATCAATATTTGATTTCAATGAATGTTTTTGCAACAAACACTAAATTGTTACAAATTCGAAAATACAAGAATCAAATTATTACTTGTTAAAGTTTAGAAACTAAATTGTTACAAAATTGAAAGTTCATGTACTAAATCGTTACAAATCAAAGTTCAAAGACTAAATTGTTACTTTCACGAAAGTTCAAAGACTATAAGTGATTTTTAACCTATTCTCGCACGTCTACGAGTCTTCTTGATATCGCCCTAAGAGATACAACCAAGCATATTAAAAAACTCTCTTTTAAGTTTCTTCTCTCTCCTCAACATGGCATTGGGGAACTGTGTGTGCTTTTTAGAGTTGCAGTGGGACTGTGGAAGCATATACATAGGTAAAGCAAAGGTTTGATTTTCTGATCGTGTGTTGTTCATTCATGAACGAGAGGTCCACTGATTCAAACTGAACCAATTATTCCAATAACTTTTCACAGACAAAACTGTAAAATAATACAAAACACCAAACTTACTTTCTTCCCCACTTTCACACTCCACCCTTCAATTTTGCACCAATGCCCATTTTTCTGTTTCTGCTCTTTTTAAGACACAAGAGACCAATTCAAAACTGCCCATCTGGCAATTTTCTATTGGCTTAGATGCCAAGTTAAAATGTTTAGGGTTTAGCAACTAAGATGTGTCCAAGCATTAACTTTTAGCTTGGTTTTTGCTTATATATGTGTGGTAGAGGCTTGAGAGTTAAAATAGGGTTTTTTCTTCTCTAGGTAATAAATAGGCTTTTAAGTGAATCTATGAGAGAGAAATTTGGATCACAAATTAGATTTGTGGAAATCGAAATCAAAATAATGTTGAACTCTTATTTATATAATCTTGATTCGTTTGGTGTGTAAGGTTAACAAAATTTGGAATAAGCATTTTAAAAAAAAAAAAAAAAAAAACAAAATTTGGAATAAGTTAAATTCATAGTTCTAATGCTAGTTTCGATCTATATATATATATGTTTCAAAATATTAATATATTGTTTAATGACATAATCTAAAACTAGGTGAGGAAAAAATAGGTTCTTTCTTATTTAAATAAGGTTTATTTTATTATTATTTTATTTTATAAAGAATATCATTAAGAAATAAGATTAAGCTGAATAAAACAGTATATTTAACAAGATTAAAAAAGAAAATCATTCCTCACTTTTCAAAAATTAAATTATTCGAAATTTTCTTTTACTTGTATTAACATTATAGGATAGAGAATGTTATTTGAAATAGATTATTTTTTAATTAGGAGTTATTTTTAAATAGAAGTTTTAGTAGATTATTAATAACAAATTGATAACCATTAATTTGTTTATGTAATTAGATTCTGTTATGGGCAGAAATCGTTCTGTGATATTTTGTGCAGGATGGGCCCCGGTGAATCGGCCCAGAAGCTAGAAGAGGCCAAGATGAAGAAGACCGAAGGGCCGGAGCCCAACCCGGCCCTCCAGACATGA

mRNA sequence

ATGGTGGAAAGACGGAGAATGGACCTCGAGCTTGCACAGGGCGAGAGACTCGGAAGCGCCGATGATTCTCATGAAGGTTTCGACCGCTTCTTGATTCGACATGGCCATTACTTCGAAAAAGTTCTCGGAAATTTGAGAGAAAGAGAGAAGGGTTTCAGTGGAGAAAGAAAAGGGGTTTCGGTTGAAGAAGATCTGGGGAGGAGGATGGGCCCCGGTGAATCGGCCCAGAAGCTAGAAGAGGCCAAGATGAAGAAGACCGAAGGGCCGGAGCCCAACCCGGCCCTCCAGACATGA

Coding sequence (CDS)

ATGGTGGAAAGACGGAGAATGGACCTCGAGCTTGCACAGGGCGAGAGACTCGGAAGCGCCGATGATTCTCATGAAGGTTTCGACCGCTTCTTGATTCGACATGGCCATTACTTCGAAAAAGTTCTCGGAAATTTGAGAGAAAGAGAGAAGGGTTTCAGTGGAGAAAGAAAAGGGGTTTCGGTTGAAGAAGATCTGGGGAGGAGGATGGGCCCCGGTGAATCGGCCCAGAAGCTAGAAGAGGCCAAGATGAAGAAGACCGAAGGGCCGGAGCCCAACCCGGCCCTCCAGACATGA

Protein sequence

MVERRRMDLELAQGERLGSADDSHEGFDRFLIRHGHYFEKVLGNLREREKGFSGERKGVSVEEDLGRRMGPGESAQKLEEAKMKKTEGPEPNPALQT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..97

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0006379Lag0006379gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0006379.1.exon1Lag0006379.1.exon1exon
Lag0006379.1.exon2Lag0006379.1.exon2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0006379.1cds.Lag0006379.1CDS
cds.Lag0006379.1cds.Lag0006379.1_2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0006379.1Lag0006379.1-proteinpolypeptide