Lag0004868.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0004868.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CCHC-type domain-containing protein
Location	chr6: 7928480 .. 7929970 (-)
Sequence length	1491
RNA-Seq Expression	Lag0004868.1
Synteny	Lag0004868.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGACCTTGCAAAGCAACTTGCAAGCCTACGTGTTACCCCTGAGGAGAAAGCTAGTGTTTTCAAACTTCAGGAAAGGGAAATTGATCGCTCTGAACAACATTTGGCGAATTCGATTCTATGTAAAGTCTACACAAATAAGAGAATCAACATAGAGATATTCCAATCGAAAATGCCAAAAATCTGGAGTCAAGAGCAGAAAAGCATAGTTAGCGTGGGGTTCAATATTTTCTTATGCAGATTCAAAAATGCACGAATAAAAGGATGGGTTGTAGAGATGGGTCCGTGGTTCTATGACAAGGCGATGCTATTGTTCGAGGAACCAAAAGGAGACATTTGCAGTGATGAAATGGAGTTCAGGTACGTTTCAATTTGGTCACATTTTCATAAGTTACCTTATGCGTGTTTTACAAGGGCATCTGCGGAGGAAATTGGTAGCTTGCTCGGGAAGGTTGAGAAAGTGGACATAGGGGATGACTCTGATCCGGAGTGGGGGAAATCATTAAGGATCAAAATTCAAATGGACGTTCAGAAGCCTTTGAAGCGGGGAATTTTCTTACAATCGGGAAGCACAGGGGGAGATAAGTGGATTCCCATTACATATGAGAAGCTCCCAGATTTTTGTTATGGTTGCGGTCGGTTGGGGCATACTATCAAGGAATGTGAGGATCAAATTAGCTCATCGGCAGAGGAGCTGCTGTACGGACCTTCCCTTCGCAAACCGGCCAGACTAAAATCAGAGGAGACTGAATTTGTTCCAAGAAACACCAACGGCAGGGGAAGAGGAAGGGGAGGGTATGGAGGCAGAGGCGGGTTGCGAAACGTGGACGTTGAACAGAAGGAAGTTGAAAATCAAGATCTCAACAAACTGTCCCCGGAGAAGGACGAGTTGACGTTGGAGGTCGAGCCGCAGCGATCGGCGGAGCAAGCGGATGAGTCGCCACCGCTGGTAAGAGATCGGCACAACACAACGGTAGCATTGTCCAAAAAGGAAAAAAGATCGGAAATGGAAAATTCAATAAAGGCTAATGGCGAAATTTTAGGAAGTCAAGAGGAAAAGATCGTTGGGGACGAGATTAAAGGAGATATTGGTATCTCAGCTTTAAATTGGGAGAAATCAGAGGAGGATGACAACGGCTCTCTACACCATAGCTCAATAATGGAAATTGATATCCACCAACAAGCGGCAGAATATGATGGGCAAGACACATATTCTCTGGTGCTTATGGATTCAATGAATGGAAATAATGAGCCCAAAGGGGGGCCCACAAAGAGTGGAACAATAAAGACCAAGGGTTGGAAAAGAATACAGAGGGATACTAAATTTAGTACTGAGTACTCTCCGAAGGTCCAACCAATAATTGGAATCAAGCACAAGGTGGAGTTTGAGTGTGAGAGCCAGAGAAAGAAAAAGATAGTGGTTTCGAACAATGAAATTAATGCGCAATCGGTGGAGGCTGCTGGACAGCCCCGCCGGGCACAATGA

mRNA sequence

ATGGAAGAAGACCTTGCAAAGCAACTTGCAAGCCTACGTGTTACCCCTGAGGAGAAAGCTAGTGTTTTCAAACTTCAGGAAAGGGAAATTGATCGCTCTGAACAACATTTGGCGAATTCGATTCTATGTAAAGTCTACACAAATAAGAGAATCAACATAGAGATATTCCAATCGAAAATGCCAAAAATCTGGAGTCAAGAGCAGAAAAGCATAGTTAGCGTGGGGTTCAATATTTTCTTATGCAGATTCAAAAATGCACGAATAAAAGGATGGGTTGTAGAGATGGGTCCGTGGTTCTATGACAAGGCGATGCTATTGTTCGAGGAACCAAAAGGAGACATTTGCAGTGATGAAATGGAGTTCAGGTACGTTTCAATTTGGTCACATTTTCATAAGTTACCTTATGCGTGTTTTACAAGGGCATCTGCGGAGGAAATTGGTAGCTTGCTCGGGAAGGTTGAGAAAGTGGACATAGGGGATGACTCTGATCCGGAGTGGGGGAAATCATTAAGGATCAAAATTCAAATGGACGTTCAGAAGCCTTTGAAGCGGGGAATTTTCTTACAATCGGGAAGCACAGGGGGAGATAAGTGGATTCCCATTACATATGAGAAGCTCCCAGATTTTTGTTATGGTTGCGGTCGGTTGGGGCATACTATCAAGGAATGTGAGGATCAAATTAGCTCATCGGCAGAGGAGCTGCTGTACGGACCTTCCCTTCGCAAACCGGCCAGACTAAAATCAGAGGAGACTGAATTTGTTCCAAGAAACACCAACGGCAGGGGAAGAGGAAGGGGAGGGTATGGAGGCAGAGGCGGGTTGCGAAACGTGGACGTTGAACAGAAGGAAGTTGAAAATCAAGATCTCAACAAACTGTCCCCGGAGAAGGACGAGTTGACGTTGGAGGTCGAGCCGCAGCGATCGGCGGAGCAAGCGGATGAGTCGCCACCGCTGGTAAGAGATCGGCACAACACAACGGTAGCATTGTCCAAAAAGGAAAAAAGATCGGAAATGGAAAATTCAATAAAGGCTAATGGCGAAATTTTAGGAAGTCAAGAGGAAAAGATCGTTGGGGACGAGATTAAAGGAGATATTGGTATCTCAGCTTTAAATTGGGAGAAATCAGAGGAGGATGACAACGGCTCTCTACACCATAGCTCAATAATGGAAATTGATATCCACCAACAAGCGGCAGAATATGATGGGCAAGACACATATTCTCTGGTGCTTATGGATTCAATGAATGGAAATAATGAGCCCAAAGGGGGGCCCACAAAGAGTGGAACAATAAAGACCAAGGGTTGGAAAAGAATACAGAGGGATACTAAATTTAGTACTGAGTACTCTCCGAAGGTCCAACCAATAATTGGAATCAAGCACAAGGTGGAGTTTGAGTGTGAGAGCCAGAGAAAGAAAAAGATAGTGGTTTCGAACAATGAAATTAATGCGCAATCGGTGGAGGCTGCTGGACAGCCCCGCCGGGCACAATGA

Coding sequence (CDS)

ATGGAAGAAGACCTTGCAAAGCAACTTGCAAGCCTACGTGTTACCCCTGAGGAGAAAGCTAGTGTTTTCAAACTTCAGGAAAGGGAAATTGATCGCTCTGAACAACATTTGGCGAATTCGATTCTATGTAAAGTCTACACAAATAAGAGAATCAACATAGAGATATTCCAATCGAAAATGCCAAAAATCTGGAGTCAAGAGCAGAAAAGCATAGTTAGCGTGGGGTTCAATATTTTCTTATGCAGATTCAAAAATGCACGAATAAAAGGATGGGTTGTAGAGATGGGTCCGTGGTTCTATGACAAGGCGATGCTATTGTTCGAGGAACCAAAAGGAGACATTTGCAGTGATGAAATGGAGTTCAGGTACGTTTCAATTTGGTCACATTTTCATAAGTTACCTTATGCGTGTTTTACAAGGGCATCTGCGGAGGAAATTGGTAGCTTGCTCGGGAAGGTTGAGAAAGTGGACATAGGGGATGACTCTGATCCGGAGTGGGGGAAATCATTAAGGATCAAAATTCAAATGGACGTTCAGAAGCCTTTGAAGCGGGGAATTTTCTTACAATCGGGAAGCACAGGGGGAGATAAGTGGATTCCCATTACATATGAGAAGCTCCCAGATTTTTGTTATGGTTGCGGTCGGTTGGGGCATACTATCAAGGAATGTGAGGATCAAATTAGCTCATCGGCAGAGGAGCTGCTGTACGGACCTTCCCTTCGCAAACCGGCCAGACTAAAATCAGAGGAGACTGAATTTGTTCCAAGAAACACCAACGGCAGGGGAAGAGGAAGGGGAGGGTATGGAGGCAGAGGCGGGTTGCGAAACGTGGACGTTGAACAGAAGGAAGTTGAAAATCAAGATCTCAACAAACTGTCCCCGGAGAAGGACGAGTTGACGTTGGAGGTCGAGCCGCAGCGATCGGCGGAGCAAGCGGATGAGTCGCCACCGCTGGTAAGAGATCGGCACAACACAACGGTAGCATTGTCCAAAAAGGAAAAAAGATCGGAAATGGAAAATTCAATAAAGGCTAATGGCGAAATTTTAGGAAGTCAAGAGGAAAAGATCGTTGGGGACGAGATTAAAGGAGATATTGGTATCTCAGCTTTAAATTGGGAGAAATCAGAGGAGGATGACAACGGCTCTCTACACCATAGCTCAATAATGGAAATTGATATCCACCAACAAGCGGCAGAATATGATGGGCAAGACACATATTCTCTGGTGCTTATGGATTCAATGAATGGAAATAATGAGCCCAAAGGGGGGCCCACAAAGAGTGGAACAATAAAGACCAAGGGTTGGAAAAGAATACAGAGGGATACTAAATTTAGTACTGAGTACTCTCCGAAGGTCCAACCAATAATTGGAATCAAGCACAAGGTGGAGTTTGAGTGTGAGAGCCAGAGAAAGAAAAAGATAGTGGTTTCGAACAATGAAATTAATGCGCAATCGGTGGAGGCTGCTGGACAGCCCCGCCGGGCACAATGA

Protein sequence

MEEDLAKQLASLRVTPEEKASVFKLQEREIDRSEQHLANSILCKVYTNKRINIEIFQSKMPKIWSQEQKSIVSVGFNIFLCRFKNARIKGWVVEMGPWFYDKAMLLFEEPKGDICSDEMEFRYVSIWSHFHKLPYACFTRASAEEIGSLLGKVEKVDIGDDSDPEWGKSLRIKIQMDVQKPLKRGIFLQSGSTGGDKWIPITYEKLPDFCYGCGRLGHTIKECEDQISSSAEELLYGPSLRKPARLKSEETEFVPRNTNGRGRGRGGYGGRGGLRNVDVEQKEVENQDLNKLSPEKDELTLEVEPQRSAEQADESPPLVRDRHNTTVALSKKEKRSEMENSIKANGEILGSQEEKIVGDEIKGDIGISALNWEKSEEDDNGSLHHSSIMEIDIHQQAAEYDGQDTYSLVLMDSMNGNNEPKGGPTKSGTIKTKGWKRIQRDTKFSTEYSPKVQPIIGIKHKVEFECESQRKKKIVVSNNEINAQSVEAAGQPRRAQ

Homology

[Close]

BLAST of Lag0004868.1 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 166.4 bits (420), Expect = 6.3e-37
Identity = 82/241 (34.02%), Postives = 137/241 (56.85%), Query Frame = 0


Query: 4   DLAKQLASLRVTPEEKASVFKLQEREIDRSEQHLANSILCKVYTNKRINIEIFQSKMPKI 63
           +L ++  + ++T EE      +    ++ + + L  S++CK+ + + I+  + ++ +   
Sbjct: 5   NLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIA 64

Query: 64  WSQEQK--SIVSVGFNIFLCRFKNARIKGWVVEMGPWFYDKAMLLFEEPKGDICSDEMEF 123
           W  + K  S+  +GFNIFL  F  +  +  ++ MGPW +D+A+++ + P       +M+F
Sbjct: 65  WKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDF 124

Query: 124 RYVSIWSHFHKLPYACFTRASAEEIGSLLGKVEKVDIGDDSDPEWGKSLRIKIQMDVQKP 183
           R VS+W HF  L  AC  +  A  +G+ +G  E V+  + ++  WG  LR++++ DV KP
Sbjct: 125 RNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVE-SNANNFCWGSCLRVRVRFDVMKP 184

Query: 184 LKRGIFLQSGSTGGDKWIPITYEKLPDFCYGCGRLGHTIKECED-QISSSAEELLYGPSL 242
           L RGI L      G  WIPI YE+LPDF Y CGRL H +K+C D  + S ++ L YGP L
Sbjct: 185 LHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWL 244

[Close]

BLAST of Lag0004868.1 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 164.1 bits (414), Expect = 3.1e-36
Identity = 90/257 (35.02%), Postives = 147/257 (57.20%), Query Frame = 0


Query: 41  ILCKVYTNKRINIEIFQSKMPKIWSQEQKS-IVSVGFNIFLCRFKNARIKGWVVEMGPWF 100
           ++ K++T+KRI+ E  +S M  +W     +    +G NI++  FK+   K  V+  GPW 
Sbjct: 39  VVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWT 98

Query: 101 YDKAMLLFEEPKGDICSDEMEFRYVSIWSHFHKLPYACFTRASAEEIGSLLGKVEKVDIG 160
           ++K++L+   P       +M F + + W   H +P+ C +   A  +G+ LG VE+++ G
Sbjct: 99  FNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIE-G 158

Query: 161 DDSDPEWGKSLRIKIQMDVQKPLKRGIFLQSGSTGGDKWIPITYEKLPDFCYGCGRLGHT 220
           D +D   G  +R+++++DV KPL+RGI L++ S G D W P+ YEKLPDFCY CG++GH+
Sbjct: 159 DGADGWAGPFIRVRVKIDVSKPLRRGIKLKN-SDGKDIWCPLRYEKLPDFCYECGKIGHS 218

Query: 221 IKECEDQ---ISSSAEELLYGPSLRKPARLKS----EETEFVPRNTNGRG-RGRGGYGGR 280
            +ECE +   +++++ E  YG  LR     KS    EE  F      GRG +  GG GGR
Sbjct: 219 GRECEQRSKVVTTNSPE-QYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQVNGGRGGR 278

Query: 281 GGLRNVDVEQKEVENQD 289
           G  R  D   ++++  +
Sbjct: 279 GDWRRRDENWRDIDGPE 292

[Close]

BLAST of Lag0004868.1 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 161.4 bits (407), Expect = 2.0e-35
Identity = 114/433 (26.33%), Postives = 208/433 (48.04%), Query Frame = 0


Query: 3   EDLAKQLASLRVTPEEKASVFKLQEREIDRSEQHLANSILCKVYTNKRINIEIFQSKMPK 62
           +D++++   L +  ++   + +++    +R EQ L+ S++ K  TNK IN E F+S +  
Sbjct: 4   DDISRKCEKLSL-DDDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTIST 63

Query: 63  IW-SQEQKSIVSVGFNIFLCRFKNARIKGWVVEMGPWFYDKAMLLFEEPKGDICSDEMEF 122
           IW ++ + ++  +G NIF  RF+N   +  ++E GPW +DK +L+  E  G     +++F
Sbjct: 64  IWQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQF 123

Query: 123 RYVSIWSHFHKLPYACFTRASAEEIGSLLGKVEKVDIGDDSDPEWGKSLRIKIQMDVQKP 182
           RYV  W   H LP AC  R     +G L+G+V+++D G+  +   G+ +RI++ +DV  P
Sbjct: 124 RYVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECV-GQFIRIRVLIDVMNP 183

Query: 183 LKRGIFLQSGSTGGDKWIPITYEKLPDFCYGCGRLGHTIKEC--EDQISSSAEELLYGPS 242
           LKRG+ +  G       + I YE+LP+FCY CG++GH +++C    +  +S+    +GP 
Sbjct: 184 LKRGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKFGPW 243

Query: 243 LRKPARLKSEETEFVPRNTNGRGRGRGGYGGRGGLRNVDVEQKEVEN------------Q 302
           +R  +R +S+ T     +  G   G    G    L N+ V+     N            +
Sbjct: 244 MRAVSRTRSKGTGEKKNSPEGSREG----GSSDTLENLRVKGSTKWNMGKDSSVLLRDGE 303

Query: 303 DLNKLSPEKDELTLEVEPQRSAEQA---DESPPLVRDRHNTTVALSKKEKRSEMENSIKA 362
            L+ ++  K   T+E +   S        E   L R      +     +    ME ++  
Sbjct: 304 QLDLMTELKSGNTIETKTAVSRTMVVSKQELLQLARSHSKEKITEDSTQNSKRMETTVTV 363

Query: 363 NGEILG---SQEEKIVGDEIKGDIGISALNWEKSEEDDNGSLH--HSSIMEIDIHQQAAE 413
              ++G   S +E  +G E  G    +   W++   +  GS++  + S+ + D      E
Sbjct: 364 TNPVIGENVSNQEGTMGSEDNGGKITNQKRWKRLAREKCGSVNEGNQSLGKKDGDMDIEE 423

[Close]

BLAST of Lag0004868.1 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 154.5 bits (389), Expect = 2.5e-33
Identity = 79/246 (32.11%), Postives = 129/246 (52.44%), Query Frame = 0


Query: 4   DLAKQLASLRVTPEEKASVFKLQEREIDRSEQHLANSILCKVYTNKRINIEIFQSKMPKI 63
           DL ++  + ++T EE+ +   +       +   L   ++ K++  + I   + ++ M   
Sbjct: 5   DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64

Query: 64  WSQEQKS--IVSVGFNIFLCRFKNARIKGWVVEMGPWFYDKAMLLFEEPKGDICSDEMEF 123
           W  E  +  + S+G+N+FL  F  A  +  + + GPW +D+ ++L  +P   I   E++F
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 124 RYVSIWSHFHKLPYACFTRASAEEIGSLLGKVEKVDIGDDSDPEWGKSLRIKIQMDVQKP 183
             + IW  F  LP  C TR  A  +G+ LG  E+ D  DD +P+WG +LR+++ +D+ KP
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADC-DDLNPDWGSNLRVRVMLDISKP 184

Query: 184 LKRGIFLQSGSTGGDKWIPITYEKLPDFCYGCGRLGHTIKECEDQISSSAEELLYGPSLR 243
           L+RGI L      G  WIPI YE+LPDFCY CG            +SSS ++  YG  LR
Sbjct: 185 LRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG------------LSSSRKKHQYGSWLR 237

Query: 244 KPARLK 248
               +K
Sbjct: 245 YQGTVK 237

[Close]

BLAST of Lag0004868.1 vs. NCBI nr
Match: VVA32948.1 (PREDICTED: DUF4283 domain-containing [Prunus dulcis])

HSP 1 Score: 154.1 bits (388), Expect = 3.2e-33
Identity = 105/326 (32.21%), Postives = 162/326 (49.69%), Query Frame = 0


Query: 3   EDLAKQLASLRVTPEEKASVFKLQEREIDRSEQHLANSILCKVYTNKRINIEIFQSKMPK 62
           +++   L    +  E++    ++++ +ID   + L  S++ KV T    N E F+  M K
Sbjct: 2   DEVINSLEKTLILTEDERDAIQVRQNDIDDVGERLKMSLVGKVLTTTAFNREAFKQTMLK 61

Query: 63  IWSQEQKSIV-SVGFNIFLCRFKNARIKGWVVEMGPWFYDKAMLLFEEPKGDICSDEMEF 122
           IWS  ++ +V  +G N+FL  F     +  V+  GPW +DKA++L E P G I   +M  
Sbjct: 62  IWSTVREVVVKDIGENLFLFIFATEGDRLRVLRSGPWNFDKALVLLETPDGSIAPSKMLL 121

Query: 123 RYVSIWSHFHKLPYACFTRASAEEIGSLLGKVEKVDIGDDSDPEWGKSLRIKIQMDVQKP 182
           +Y   W   H +P +C +     +IG+  G+   V  G D     G+ LR+++ +DV KP
Sbjct: 122 KYADFWIQVHNVPLSCMSTNLGRQIGNSFGRCLDVIEGMDGKC-LGRFLRLRVSVDVSKP 181

Query: 183 LKRG--IFLQSGSTGGDKWIPITYEKLPDFCYGCGRLGHTIKECE--DQISSSAEELLYG 242
           L+RG  + L SG+T    ++   YE+LP+FC+ CGRLGH  KEC   DQ +  A+E  YG
Sbjct: 182 LRRGKKMTLPSGNT---VFVEFRYERLPEFCFCCGRLGHVFKECSFVDQAAKQADEKPYG 241

Query: 243 PSLRKPARLKSEETEFVPRNTNGRGRGRGGYGGRGGLRNVDVEQKEVENQDLNKLSPEKD 302
             L+      S      P+ TNG G    G G +        ++ EVE Q  N    +  
Sbjct: 242 SWLKATKDFHSIRAG-NPKRTNGSGSEAEGDGAK-------EKEMEVEGQQSNSSGEKVA 301

Query: 303 ELTLE-VEPQRSAEQADESPPLVRDR 323
           E +L  +  QR  E+    PP   DR
Sbjct: 302 ESSLGLLSKQRVGER--RQPPREADR 313

[Close]

BLAST of Lag0004868.1 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.0e-37
Identity = 82/241 (34.02%), Postives = 137/241 (56.85%), Query Frame = 0


Query: 4   DLAKQLASLRVTPEEKASVFKLQEREIDRSEQHLANSILCKVYTNKRINIEIFQSKMPKI 63
           +L ++  + ++T EE      +    ++ + + L  S++CK+ + + I+  + ++ +   
Sbjct: 5   NLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIA 64

Query: 64  WSQEQK--SIVSVGFNIFLCRFKNARIKGWVVEMGPWFYDKAMLLFEEPKGDICSDEMEF 123
           W  + K  S+  +GFNIFL  F  +  +  ++ MGPW +D+A+++ + P       +M+F
Sbjct: 65  WKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDF 124

Query: 124 RYVSIWSHFHKLPYACFTRASAEEIGSLLGKVEKVDIGDDSDPEWGKSLRIKIQMDVQKP 183
           R VS+W HF  L  AC  +  A  +G+ +G  E V+  + ++  WG  LR++++ DV KP
Sbjct: 125 RNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVE-SNANNFCWGSCLRVRVRFDVMKP 184

Query: 184 LKRGIFLQSGSTGGDKWIPITYEKLPDFCYGCGRLGHTIKECED-QISSSAEELLYGPSL 242
           L RGI L      G  WIPI YE+LPDF Y CGRL H +K+C D  + S ++ L YGP L
Sbjct: 185 LHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWL 244

[Close]

BLAST of Lag0004868.1 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-36
Identity = 90/257 (35.02%), Postives = 147/257 (57.20%), Query Frame = 0


Query: 41  ILCKVYTNKRINIEIFQSKMPKIWSQEQKS-IVSVGFNIFLCRFKNARIKGWVVEMGPWF 100
           ++ K++T+KRI+ E  +S M  +W     +    +G NI++  FK+   K  V+  GPW 
Sbjct: 39  VVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWT 98

Query: 101 YDKAMLLFEEPKGDICSDEMEFRYVSIWSHFHKLPYACFTRASAEEIGSLLGKVEKVDIG 160
           ++K++L+   P       +M F + + W   H +P+ C +   A  +G+ LG VE+++ G
Sbjct: 99  FNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIE-G 158

Query: 161 DDSDPEWGKSLRIKIQMDVQKPLKRGIFLQSGSTGGDKWIPITYEKLPDFCYGCGRLGHT 220
           D +D   G  +R+++++DV KPL+RGI L++ S G D W P+ YEKLPDFCY CG++GH+
Sbjct: 159 DGADGWAGPFIRVRVKIDVSKPLRRGIKLKN-SDGKDIWCPLRYEKLPDFCYECGKIGHS 218

Query: 221 IKECEDQ---ISSSAEELLYGPSLRKPARLKS----EETEFVPRNTNGRG-RGRGGYGGR 280
            +ECE +   +++++ E  YG  LR     KS    EE  F      GRG +  GG GGR
Sbjct: 219 GRECEQRSKVVTTNSPE-QYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQVNGGRGGR 278

Query: 281 GGLRNVDVEQKEVENQD 289
           G  R  D   ++++  +
Sbjct: 279 GDWRRRDENWRDIDGPE 292

[Close]

BLAST of Lag0004868.1 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 9.8e-36
Identity = 114/433 (26.33%), Postives = 208/433 (48.04%), Query Frame = 0


Query: 3   EDLAKQLASLRVTPEEKASVFKLQEREIDRSEQHLANSILCKVYTNKRINIEIFQSKMPK 62
           +D++++   L +  ++   + +++    +R EQ L+ S++ K  TNK IN E F+S +  
Sbjct: 4   DDISRKCEKLSL-DDDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTIST 63

Query: 63  IW-SQEQKSIVSVGFNIFLCRFKNARIKGWVVEMGPWFYDKAMLLFEEPKGDICSDEMEF 122
           IW ++ + ++  +G NIF  RF+N   +  ++E GPW +DK +L+  E  G     +++F
Sbjct: 64  IWQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQF 123

Query: 123 RYVSIWSHFHKLPYACFTRASAEEIGSLLGKVEKVDIGDDSDPEWGKSLRIKIQMDVQKP 182
           RYV  W   H LP AC  R     +G L+G+V+++D G+  +   G+ +RI++ +DV  P
Sbjct: 124 RYVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECV-GQFIRIRVLIDVMNP 183

Query: 183 LKRGIFLQSGSTGGDKWIPITYEKLPDFCYGCGRLGHTIKEC--EDQISSSAEELLYGPS 242
           LKRG+ +  G       + I YE+LP+FCY CG++GH +++C    +  +S+    +GP 
Sbjct: 184 LKRGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKFGPW 243

Query: 243 LRKPARLKSEETEFVPRNTNGRGRGRGGYGGRGGLRNVDVEQKEVEN------------Q 302
           +R  +R +S+ T     +  G   G    G    L N+ V+     N            +
Sbjct: 244 MRAVSRTRSKGTGEKKNSPEGSREG----GSSDTLENLRVKGSTKWNMGKDSSVLLRDGE 303

Query: 303 DLNKLSPEKDELTLEVEPQRSAEQA---DESPPLVRDRHNTTVALSKKEKRSEMENSIKA 362
            L+ ++  K   T+E +   S        E   L R      +     +    ME ++  
Sbjct: 304 QLDLMTELKSGNTIETKTAVSRTMVVSKQELLQLARSHSKEKITEDSTQNSKRMETTVTV 363

Query: 363 NGEILG---SQEEKIVGDEIKGDIGISALNWEKSEEDDNGSLH--HSSIMEIDIHQQAAE 413
              ++G   S +E  +G E  G    +   W++   +  GS++  + S+ + D      E
Sbjct: 364 TNPVIGENVSNQEGTMGSEDNGGKITNQKRWKRLAREKCGSVNEGNQSLGKKDGDMDIEE 423

[Close]

BLAST of Lag0004868.1 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-33
Identity = 79/246 (32.11%), Postives = 129/246 (52.44%), Query Frame = 0


Query: 4   DLAKQLASLRVTPEEKASVFKLQEREIDRSEQHLANSILCKVYTNKRINIEIFQSKMPKI 63
           DL ++  + ++T EE+ +   +       +   L   ++ K++  + I   + ++ M   
Sbjct: 5   DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64

Query: 64  WSQEQKS--IVSVGFNIFLCRFKNARIKGWVVEMGPWFYDKAMLLFEEPKGDICSDEMEF 123
           W  E  +  + S+G+N+FL  F  A  +  + + GPW +D+ ++L  +P   I   E++F
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 124 RYVSIWSHFHKLPYACFTRASAEEIGSLLGKVEKVDIGDDSDPEWGKSLRIKIQMDVQKP 183
             + IW  F  LP  C TR  A  +G+ LG  E+ D  DD +P+WG +LR+++ +D+ KP
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADC-DDLNPDWGSNLRVRVMLDISKP 184

Query: 184 LKRGIFLQSGSTGGDKWIPITYEKLPDFCYGCGRLGHTIKECEDQISSSAEELLYGPSLR 243
           L+RGI L      G  WIPI YE+LPDFCY CG            +SSS ++  YG  LR
Sbjct: 185 LRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG------------LSSSRKKHQYGSWLR 237

Query: 244 KPARLK 248
               +K
Sbjct: 245 YQGTVK 237

[Close]

BLAST of Lag0004868.1 vs. ExPASy TrEMBL
Match: A0A5E4G034 (PREDICTED: DUF4283 domain-containing OS=Prunus dulcis OX=3755 GN=ALMOND_2B021569 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.6e-33
Identity = 105/326 (32.21%), Postives = 162/326 (49.69%), Query Frame = 0


Query: 3   EDLAKQLASLRVTPEEKASVFKLQEREIDRSEQHLANSILCKVYTNKRINIEIFQSKMPK 62
           +++   L    +  E++    ++++ +ID   + L  S++ KV T    N E F+  M K
Sbjct: 2   DEVINSLEKTLILTEDERDAIQVRQNDIDDVGERLKMSLVGKVLTTTAFNREAFKQTMLK 61

Query: 63  IWSQEQKSIV-SVGFNIFLCRFKNARIKGWVVEMGPWFYDKAMLLFEEPKGDICSDEMEF 122
           IWS  ++ +V  +G N+FL  F     +  V+  GPW +DKA++L E P G I   +M  
Sbjct: 62  IWSTVREVVVKDIGENLFLFIFATEGDRLRVLRSGPWNFDKALVLLETPDGSIAPSKMLL 121

Query: 123 RYVSIWSHFHKLPYACFTRASAEEIGSLLGKVEKVDIGDDSDPEWGKSLRIKIQMDVQKP 182
           +Y   W   H +P +C +     +IG+  G+   V  G D     G+ LR+++ +DV KP
Sbjct: 122 KYADFWIQVHNVPLSCMSTNLGRQIGNSFGRCLDVIEGMDGKC-LGRFLRLRVSVDVSKP 181

Query: 183 LKRG--IFLQSGSTGGDKWIPITYEKLPDFCYGCGRLGHTIKECE--DQISSSAEELLYG 242
           L+RG  + L SG+T    ++   YE+LP+FC+ CGRLGH  KEC   DQ +  A+E  YG
Sbjct: 182 LRRGKKMTLPSGNT---VFVEFRYERLPEFCFCCGRLGHVFKECSFVDQAAKQADEKPYG 241

Query: 243 PSLRKPARLKSEETEFVPRNTNGRGRGRGGYGGRGGLRNVDVEQKEVENQDLNKLSPEKD 302
             L+      S      P+ TNG G    G G +        ++ EVE Q  N    +  
Sbjct: 242 SWLKATKDFHSIRAG-NPKRTNGSGSEAEGDGAK-------EKEMEVEGQQSNSSGEKVA 301

Query: 303 ELTLE-VEPQRSAEQADESPPLVRDR 323
           E +L  +  QR  E+    PP   DR
Sbjct: 302 ESSLGLLSKQRVGER--RQPPREADR 313

The following BLAST results are available for this feature:

BLAST of Lag0004868.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132681.1	6.3e-37	34.02	uncharacterized protein LOC111005481 [Momordica charantia]	[more]
XP_022149484.1	3.1e-36	35.02	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
TXG54013.1	2.0e-35	26.33	hypothetical protein EZV62_019269 [Acer yangbiense]	[more]
XP_022158377.1	2.5e-33	32.11	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
VVA32948.1	3.2e-33	32.21	PREDICTED: DUF4283 domain-containing [Prunus dulcis]	[more]

BLAST of Lag0004868.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0004868.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BSZ1	3.0e-37	34.02	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1D765	1.5e-36	35.02	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5C7H9Y2	9.8e-36	26.33	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926...	[more]
A0A6J1DX30	1.2e-33	32.11	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A5E4G034	1.6e-33	32.21	PREDICTED: DUF4283 domain-containing OS=Prunus dulcis OX=3755 GN=ALMOND_2B021569...	[more]

BLAST of Lag0004868.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 176..224 e-value: 3.4E-11 score: 42.7
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 30..174 e-value: 4.5E-19 score: 68.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 477..496
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..325
None	No IPR available	PANTHER	PTHR31286:SF62	SUBFAMILY NOT NAMED	coord: 34..391
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 34..391
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 210..225 score: 9.520856

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0004868	Lag0004868	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0004868.1.exon1	Lag0004868.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0004868.1	cds.Lag0004868.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0004868.1	Lag0004868.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding