Lag0002504.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0002504.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CCHC-type domain-containing protein
Location	chr4: 43405118 .. 43406602 (-)
Sequence length	1485
RNA-Seq Expression	Lag0002504.1
Synteny	Lag0002504.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCAACTGCTGCTGCGGAGGCAATATCATCACAATTAGCGAACTTGAAGGTTACAGAAGATGAAAAAGCAAGTATTTTTCATTTACAGGAGAATGCAATAGATACGTCTGAGAAGAAACTGGTCAATGCATTGTTGTGTAAAATCTCAACTCATAGAAAGATTAATCCGGAGGTATTCAGAGGGATGATGCCGCGCATATGGGGCCAGGAACACACAATCATTGACCATGTGGGCGCCAATGTGTTCCTATGTAAATTCAGGAATGCGCGAATAAAAGGATTTATACAAGAAGGCGGACCATGGTTTTATGATAAATCTTTGCTGGTATTCGAGGAACCAAGAGCAGACATCAATGCGGAGGATATGGAGTTCAGGTTTGTTTCTTTCTGGATTCATTTTCACAAATTACCGTTTGCTTGTTTTGACAGGGCCTCGGCTACGGAGATTGGTACTTTGCTTGGGAAGGTTGAAAAAGTTGACATCGATGAAGACACTGATCCGAAAATGGGGCGTTCGCTAAGGATTAAAATTCAGATCGATGTGAAAAAACCATTGAAACGAGGAATCTTTATGAAATCAAGTAAACATGGAGGGGAAAGATGGATTGGTATAACTTATGAGAAGCTACCGAATTTTTGCTACGGTTGTGGTTGGATAGGACACACTATAAGGGAATGCGAAGAAATGTTATCATCAAAGGAGGAGGACCTTCCATATGGACCATGGATGCGAGAAAGTGTTAAACTCAAACTGCCGGAACCGAACTTTCAATCTAGGATAATGAACCAGCAAGCTGGACGTGGAAGGGGAATAATGGAGGGCAGATGGAGACAACAAATTTATGAGGATGAAGATGAACTCAACAAGGGATCGTTGATAGATGAAAAGAGCAGAAGCCTACAAACAGATGACCGAAAAACGCATCCTTCACCGGAAAACTCAGACGGGGCGGCCGGTGGGAGTCAGTCCGTTCAAACGGTCATATTTCCAAAAAAGGAGAAAGAGAAAACGACCATTAATGAGAATAATTCAGCCTCATTAAATGGGGCAAAAATTACGGAGCATCTTATTTCCAAGCAATCAATTGAAAAGGAAGAATTGACTAACGGGCAGAAAAGTGAGAATCAAATGATGGATTTGGATTTAAATCTCGAGGGAGTTAATAGGGAAAGAGAAGTTATTAGCTCCAACAATGAGGTAATGTTACAGGTTGAAAGAGACAAAACTACAGAGTCTGGAACAAAGAAAGAGAATGCCAAATCAGAAAGTAGGAAAAAAACTTGGAAAAGGACACTGAGGGCACCAGTAATGGAACTTCCTGAGATCTCTGGGAGGAGTGTTGGACAACAAGTTTCTGGGGGAAAACACAAACTGGAGCTAGATGTAGAACACTTTAGAAACAAGAAAATGATGATTTCAGAGGACAACACAATTGTAAGATCGGTGGAGGCTGCTGGACAGCCCCGCCGGACACAATGA

mRNA sequence

ATGAATTCAACTGCTGCTGCGGAGGCAATATCATCACAATTAGCGAACTTGAAGGTTACAGAAGATGAAAAAGCAAGTATTTTTCATTTACAGGAGAATGCAATAGATACGTCTGAGAAGAAACTGGTCAATGCATTGTTGTGTAAAATCTCAACTCATAGAAAGATTAATCCGGAGGTATTCAGAGGGATGATGCCGCGCATATGGGGCCAGGAACACACAATCATTGACCATGTGGGCGCCAATGTGTTCCTATGTAAATTCAGGAATGCGCGAATAAAAGGATTTATACAAGAAGGCGGACCATGGTTTTATGATAAATCTTTGCTGGTATTCGAGGAACCAAGAGCAGACATCAATGCGGAGGATATGGAGTTCAGGTTTGTTTCTTTCTGGATTCATTTTCACAAATTACCGTTTGCTTGTTTTGACAGGGCCTCGGCTACGGAGATTGGTACTTTGCTTGGGAAGGTTGAAAAAGTTGACATCGATGAAGACACTGATCCGAAAATGGGGCGTTCGCTAAGGATTAAAATTCAGATCGATGTGAAAAAACCATTGAAACGAGGAATCTTTATGAAATCAAGTAAACATGGAGGGGAAAGATGGATTGGTATAACTTATGAGAAGCTACCGAATTTTTGCTACGGTTGTGGTTGGATAGGACACACTATAAGGGAATGCGAAGAAATGTTATCATCAAAGGAGGAGGACCTTCCATATGGACCATGGATGCGAGAAAGTGTTAAACTCAAACTGCCGGAACCGAACTTTCAATCTAGGATAATGAACCAGCAAGCTGGACGTGGAAGGGGAATAATGGAGGGCAGATGGAGACAACAAATTTATGAGGATGAAGATGAACTCAACAAGGGATCGTTGATAGATGAAAAGAGCAGAAGCCTACAAACAGATGACCGAAAAACGCATCCTTCACCGGAAAACTCAGACGGGGCGGCCGGTGGGAGTCAGTCCGTTCAAACGGTCATATTTCCAAAAAAGGAGAAAGAGAAAACGACCATTAATGAGAATAATTCAGCCTCATTAAATGGGGCAAAAATTACGGAGCATCTTATTTCCAAGCAATCAATTGAAAAGGAAGAATTGACTAACGGGCAGAAAAGTGAGAATCAAATGATGGATTTGGATTTAAATCTCGAGGGAGTTAATAGGGAAAGAGAAGTTATTAGCTCCAACAATGAGGTAATGTTACAGGTTGAAAGAGACAAAACTACAGAGTCTGGAACAAAGAAAGAGAATGCCAAATCAGAAAGTAGGAAAAAAACTTGGAAAAGGACACTGAGGGCACCAGTAATGGAACTTCCTGAGATCTCTGGGAGGAGTGTTGGACAACAAGTTTCTGGGGGAAAACACAAACTGGAGCTAGATGTAGAACACTTTAGAAACAAGAAAATGATGATTTCAGAGGACAACACAATTGTAAGATCGGTGGAGGCTGCTGGACAGCCCCGCCGGACACAATGA

Coding sequence (CDS)

ATGAATTCAACTGCTGCTGCGGAGGCAATATCATCACAATTAGCGAACTTGAAGGTTACAGAAGATGAAAAAGCAAGTATTTTTCATTTACAGGAGAATGCAATAGATACGTCTGAGAAGAAACTGGTCAATGCATTGTTGTGTAAAATCTCAACTCATAGAAAGATTAATCCGGAGGTATTCAGAGGGATGATGCCGCGCATATGGGGCCAGGAACACACAATCATTGACCATGTGGGCGCCAATGTGTTCCTATGTAAATTCAGGAATGCGCGAATAAAAGGATTTATACAAGAAGGCGGACCATGGTTTTATGATAAATCTTTGCTGGTATTCGAGGAACCAAGAGCAGACATCAATGCGGAGGATATGGAGTTCAGGTTTGTTTCTTTCTGGATTCATTTTCACAAATTACCGTTTGCTTGTTTTGACAGGGCCTCGGCTACGGAGATTGGTACTTTGCTTGGGAAGGTTGAAAAAGTTGACATCGATGAAGACACTGATCCGAAAATGGGGCGTTCGCTAAGGATTAAAATTCAGATCGATGTGAAAAAACCATTGAAACGAGGAATCTTTATGAAATCAAGTAAACATGGAGGGGAAAGATGGATTGGTATAACTTATGAGAAGCTACCGAATTTTTGCTACGGTTGTGGTTGGATAGGACACACTATAAGGGAATGCGAAGAAATGTTATCATCAAAGGAGGAGGACCTTCCATATGGACCATGGATGCGAGAAAGTGTTAAACTCAAACTGCCGGAACCGAACTTTCAATCTAGGATAATGAACCAGCAAGCTGGACGTGGAAGGGGAATAATGGAGGGCAGATGGAGACAACAAATTTATGAGGATGAAGATGAACTCAACAAGGGATCGTTGATAGATGAAAAGAGCAGAAGCCTACAAACAGATGACCGAAAAACGCATCCTTCACCGGAAAACTCAGACGGGGCGGCCGGTGGGAGTCAGTCCGTTCAAACGGTCATATTTCCAAAAAAGGAGAAAGAGAAAACGACCATTAATGAGAATAATTCAGCCTCATTAAATGGGGCAAAAATTACGGAGCATCTTATTTCCAAGCAATCAATTGAAAAGGAAGAATTGACTAACGGGCAGAAAAGTGAGAATCAAATGATGGATTTGGATTTAAATCTCGAGGGAGTTAATAGGGAAAGAGAAGTTATTAGCTCCAACAATGAGGTAATGTTACAGGTTGAAAGAGACAAAACTACAGAGTCTGGAACAAAGAAAGAGAATGCCAAATCAGAAAGTAGGAAAAAAACTTGGAAAAGGACACTGAGGGCACCAGTAATGGAACTTCCTGAGATCTCTGGGAGGAGTGTTGGACAACAAGTTTCTGGGGGAAAACACAAACTGGAGCTAGATGTAGAACACTTTAGAAACAAGAAAATGATGATTTCAGAGGACAACACAATTGTAAGATCGGTGGAGGCTGCTGGACAGCCCCGCCGGACACAATGA

Protein sequence

MNSTAAAEAISSQLANLKVTEDEKASIFHLQENAIDTSEKKLVNALLCKISTHRKINPEVFRGMMPRIWGQEHTIIDHVGANVFLCKFRNARIKGFIQEGGPWFYDKSLLVFEEPRADINAEDMEFRFVSFWIHFHKLPFACFDRASATEIGTLLGKVEKVDIDEDTDPKMGRSLRIKIQIDVKKPLKRGIFMKSSKHGGERWIGITYEKLPNFCYGCGWIGHTIRECEEMLSSKEEDLPYGPWMRESVKLKLPEPNFQSRIMNQQAGRGRGIMEGRWRQQIYEDEDELNKGSLIDEKSRSLQTDDRKTHPSPENSDGAAGGSQSVQTVIFPKKEKEKTTINENNSASLNGAKITEHLISKQSIEKEELTNGQKSENQMMDLDLNLEGVNREREVISSNNEVMLQVERDKTTESGTKKENAKSESRKKTWKRTLRAPVMELPEISGRSVGQQVSGGKHKLELDVEHFRNKKMMISEDNTIVRSVEAAGQPRRTQ

Homology

[Close]

BLAST of Lag0002504.1 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 167.2 bits (422), Expect = 3.7e-37
Identity = 84/231 (36.36%), Postives = 133/231 (57.58%), Query Frame = 0


Query: 21  EDEKASIFHLQENAIDTSEKKLVNALLCKISTHRKINPEVFRGMMPRIWGQEHTI-IDHV 80
           +D+   I  ++ +  +  E+ L  +L+ K  T++ IN E F+  +  IW  ++ + ++ +
Sbjct: 16  DDDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTISTIWQTKNEVTMELM 75

Query: 81  GANVFLCKFRNARIKGFIQEGGPWFYDKSLLVFEEPRADINAEDMEFRFVSFWIHFHKLP 140
           G N+F  +F+N   +  I EGGPW +DK LLV  E        D++FR+V FWI  H LP
Sbjct: 76  GINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQFRYVPFWIQLHNLP 135

Query: 141 FACFDRASATEIGTLLGKVEKVDIDEDTDPKMGRSLRIKIQIDVKKPLKRGIFMKSSKHG 200
            AC +R     +G L+G+V+++D  E  +  +G+ +RI++ IDV  PLKRG+ +      
Sbjct: 136 LACLNREIGLHLGGLVGQVKEIDAGESGE-CVGQFIRIRVLIDVMNPLKRGLRVALGDDE 195

Query: 201 GERWIGITYEKLPNFCYGCGWIGHTIRECEEMLSSKE----EDLPYGPWMR 247
               + I YE+LPNFCY CG IGH +R+C   L++KE        +GPWMR
Sbjct: 196 KVNEVMICYERLPNFCYYCGKIGHLVRDCP--LNTKEITSSSSFKFGPWMR 243

[Close]

BLAST of Lag0002504.1 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 165.2 bits (417), Expect = 1.4e-36
Identity = 97/288 (33.68%), Postives = 150/288 (52.08%), Query Frame = 0


Query: 8   EAISSQLANLKVTEDEKASIFHLQENAIDTSEKKLVNALLC---KISTHRKINPEVFRGM 67
           + I+    + K T DE  ++   +   I T++    N  LC   K+ T ++I+ E  R +
Sbjct: 2   DEITDLWEHFKSTNDENETVTIDRGKPILTAD----NVKLCVVAKLHTSKRISAEAIRSV 61

Query: 68  MPRIWG-QEHTIIDHVGANVFLCKFRNARIKGFIQEGGPWFYDKSLLVFEEPRADINAED 127
           M  +W     T  + +G N+++  F++   K  +   GPW ++KSLLV   P A     D
Sbjct: 62  MKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLD 121

Query: 128 MEFRFVSFWIHFHKLPFACFDRASATEIGTLLGKVEKVDIDEDTDPKMGRSLRIKIQIDV 187
           M F F +FWI  H +PF C     A  +G  LG VE+++ D   D   G  +R++++IDV
Sbjct: 122 MNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGD-GADGWAGPFIRVRVKIDV 181

Query: 188 KKPLKRGIFMKSSKHGGERWIGITYEKLPNFCYGCGWIGHTIRECEEMLSSKEEDLP--Y 247
            KPL+RGI +K+S  G + W  + YEKLP+FCY CG IGH+ RECE+       + P  Y
Sbjct: 182 SKPLRRGIKLKNS-DGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQY 241

Query: 248 GPWMRES-VKLKLPEPNFQSRIMNQQAGRGRGIMEGRWRQQIYEDEDE 289
           G W+R + +K  +  P  +      + GRG  +  GR  +  +   DE
Sbjct: 242 GDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQVNGGRGGRGDWRRRDE 283

[Close]

BLAST of Lag0002504.1 vs. NCBI nr
Match: TXG54301.1 (hypothetical protein EZV62_019557 [Acer yangbiense])

HSP 1 Score: 165.2 bits (417), Expect = 1.4e-36
Identity = 93/292 (31.85%), Postives = 147/292 (50.34%), Query Frame = 0


Query: 6   AAEAISSQLANLKVTEDEKASIFHLQENAIDTSEKKLVNALLCKISTHRKINPEVFRGMM 65
           +A  I+    NL + +DE   I  + E      E+ + + L+ KI + R++N E FR ++
Sbjct: 2   SANEIAKLCENLSI-KDEDGEIHQISEEVGRVGEEDVNHCLVGKILSGRRVNREAFRMVI 61

Query: 66  PRIWGQEHTI-IDHVGANVFLCKFRNARIKGFIQEGGPWFYDKSLLVFEEPRADINAEDM 125
             +W     + I+ V  NVFL  F     +  + + GPW +DK LLV E+P        +
Sbjct: 62  ESLWSPFGNVDIEMVSENVFLFFFNKPEDRNKVWDRGPWHFDKCLLVLEKPEGTGEISKL 121

Query: 126 EFRFVSFWIHFHKLPFACFDRASATEIGTLLGKVEKVDIDEDTDPKMGRSLRIKIQIDVK 185
           +F    FWI  H +P  C +R +A  +   +G+V  ++I  D+    G+ LR+K++ID+ 
Sbjct: 122 KFNKADFWIQIHDIPIMCMNRRTAKWLAEQIGEV--IEIPTDSRDCWGKFLRVKVRIDIS 181

Query: 186 KPLKRGIFMKSSKHGGERWIGITYEKLPNFCYGCGWIGHTIRECEEMLSSKE----EDLP 245
           KPLKR + +   + G    +G+ YE+LP FCY CGW+GH I EC +  + KE      L 
Sbjct: 182 KPLKRWLRLGLDRSGNIVVVGLKYERLPEFCYACGWLGHGISECPDTEAKKEAMEGATLR 241

Query: 246 YGPWMRESVKLK----------LP-EPNFQSRIMNQQAGRGRGIMEGRWRQQ 282
           +GPWMR  ++            +P E        N + G+ R I   RW+ Q
Sbjct: 242 FGPWMRAPIQRNRKISHHPSTGIPKEAASGETFYNLRGGKARRIDVFRWQNQ 290

[Close]

BLAST of Lag0002504.1 vs. NCBI nr
Match: TXG48193.1 (hypothetical protein EZV62_027487 [Acer yangbiense])

HSP 1 Score: 162.5 bits (410), Expect = 9.0e-36
Identity = 88/300 (29.33%), Postives = 161/300 (53.67%), Query Frame = 0


Query: 7   AEAISSQLANLKVTEDEKASIFHLQENAIDTSEKKLVNALLCKISTHRKINPEVFRGMMP 66
           +EA  +QL      EDE A++  + E+ I   ++ +   L+ K+ T +K+N E F+G++ 
Sbjct: 2   SEAEITQLYENLSLEDEDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIE 61

Query: 67  RIWGQEHTI-IDHVGANVFLCKFRNARIKGFIQEGGPWFYDKSLLVFEEPRADINAEDME 126
           +IW Q   + ++ VG N F+  F N   +  +   GPW + KSL+V E+P+   +   ++
Sbjct: 62  QIWNQFGQVEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLK 121

Query: 127 FRFVSFWIHFHKLPFACFDRASATEIGTLLGKVEKVDIDEDTDPKMGRSLRIKIQIDVKK 186
           F    FW+  H +P  C ++ +   +   +G+V  V+I  ++    G+ +R+K+Q+D+ K
Sbjct: 122 FNQADFWVQIHDIPIMCMNQRTTKWLAEYIGEV--VEIPTESRECWGKYVRVKVQVDITK 181

Query: 187 PLKRGIFMKSSKHGGERWIGITYEKLPNFCYGCGWIGHTIRECEEMLSSKE----EDLPY 246
           PLKR + +K  K+     + + YE+LP+FC+ CG IGH++REC +  + +     +   +
Sbjct: 182 PLKRWLRIKLGKYEEITMVALKYERLPDFCFACGRIGHSVRECLDEDAKRAALDGQQTKF 241

Query: 247 GPWMRESVKLKLPEPNFQSRIMNQQAGRGRGIMEGRWRQQIYEDEDELNKGSLIDEKSRS 302
           G WMR +  +   +    S      + RGR + EG  R+   +    +  G++  +KSRS
Sbjct: 242 GSWMR-ATPIDKSKTKSISLTTGSSSERGRSV-EGS-RELEGDGSLSMRSGNVAPQKSRS 296

[Close]

BLAST of Lag0002504.1 vs. NCBI nr
Match: XP_015382889.1 (uncharacterized protein LOC102626150 [Citrus sinensis])

HSP 1 Score: 161.0 bits (406), Expect = 2.6e-35
Identity = 77/210 (36.67%), Postives = 123/210 (58.57%), Query Frame = 0


Query: 39  EKKLVNALLCKISTHRKINPEVFRGMMPRIWGQEHTI-IDHVGANVFLCKFRNARIKGFI 98
           EK +   L+ K+   RK++ E  +  M R+W     + I+ +G NVF+ KF +   K  I
Sbjct: 6   EKIVAGCLIGKVLHTRKVSIEGLKLAMSRVWKTSREVKIEKLGDNVFMFKFGSEVDKRSI 65

Query: 99  QEGGPWFYDKSLLVFEEPRADINAEDMEFRFVSFWIHFHKLPFACFDRASATEIGTLLGK 158
             GGPW +D++L+V  EP    + +   F  VS W+  H +P  C  +  AT++G ++GK
Sbjct: 66  LVGGPWHFDRALIVLVEPVGIGDIKKQSFSQVSLWVQIHDVPIMCMSKEMATQLGAVIGK 125

Query: 159 VEKVDIDEDTDPKMGRSLRIKIQIDVKKPLKRGIFMKSSKHGGERW-IGITYEKLPNFCY 218
           VE+VD + D    +G  LR++I +D+ KPLK+ I ++  +   E   + + YE+LP+FC+
Sbjct: 126 VEEVDTN-DAGECLGPFLRLRISVDISKPLKKIIELEQDEEDAEDIPMRVMYERLPDFCF 185

Query: 219 GCGWIGHTIRECEEMLSSKEEDLPYGPWMR 247
            CG IGH  REC   +S  +++L YGPW+R
Sbjct: 186 CCGRIGHQYRECAHYISQSKDELAYGPWLR 214

[Close]

BLAST of Lag0002504.1 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.8e-37
Identity = 84/231 (36.36%), Postives = 133/231 (57.58%), Query Frame = 0


Query: 21  EDEKASIFHLQENAIDTSEKKLVNALLCKISTHRKINPEVFRGMMPRIWGQEHTI-IDHV 80
           +D+   I  ++ +  +  E+ L  +L+ K  T++ IN E F+  +  IW  ++ + ++ +
Sbjct: 16  DDDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTISTIWQTKNEVTMELM 75

Query: 81  GANVFLCKFRNARIKGFIQEGGPWFYDKSLLVFEEPRADINAEDMEFRFVSFWIHFHKLP 140
           G N+F  +F+N   +  I EGGPW +DK LLV  E        D++FR+V FWI  H LP
Sbjct: 76  GINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQFRYVPFWIQLHNLP 135

Query: 141 FACFDRASATEIGTLLGKVEKVDIDEDTDPKMGRSLRIKIQIDVKKPLKRGIFMKSSKHG 200
            AC +R     +G L+G+V+++D  E  +  +G+ +RI++ IDV  PLKRG+ +      
Sbjct: 136 LACLNREIGLHLGGLVGQVKEIDAGESGE-CVGQFIRIRVLIDVMNPLKRGLRVALGDDE 195

Query: 201 GERWIGITYEKLPNFCYGCGWIGHTIRECEEMLSSKE----EDLPYGPWMR 247
               + I YE+LPNFCY CG IGH +R+C   L++KE        +GPWMR
Sbjct: 196 KVNEVMICYERLPNFCYYCGKIGHLVRDCP--LNTKEITSSSSFKFGPWMR 243

[Close]

BLAST of Lag0002504.1 vs. ExPASy TrEMBL
Match: A0A5C7HBM7 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019557 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.7e-37
Identity = 93/292 (31.85%), Postives = 147/292 (50.34%), Query Frame = 0


Query: 6   AAEAISSQLANLKVTEDEKASIFHLQENAIDTSEKKLVNALLCKISTHRKINPEVFRGMM 65
           +A  I+    NL + +DE   I  + E      E+ + + L+ KI + R++N E FR ++
Sbjct: 2   SANEIAKLCENLSI-KDEDGEIHQISEEVGRVGEEDVNHCLVGKILSGRRVNREAFRMVI 61

Query: 66  PRIWGQEHTI-IDHVGANVFLCKFRNARIKGFIQEGGPWFYDKSLLVFEEPRADINAEDM 125
             +W     + I+ V  NVFL  F     +  + + GPW +DK LLV E+P        +
Sbjct: 62  ESLWSPFGNVDIEMVSENVFLFFFNKPEDRNKVWDRGPWHFDKCLLVLEKPEGTGEISKL 121

Query: 126 EFRFVSFWIHFHKLPFACFDRASATEIGTLLGKVEKVDIDEDTDPKMGRSLRIKIQIDVK 185
           +F    FWI  H +P  C +R +A  +   +G+V  ++I  D+    G+ LR+K++ID+ 
Sbjct: 122 KFNKADFWIQIHDIPIMCMNRRTAKWLAEQIGEV--IEIPTDSRDCWGKFLRVKVRIDIS 181

Query: 186 KPLKRGIFMKSSKHGGERWIGITYEKLPNFCYGCGWIGHTIRECEEMLSSKE----EDLP 245
           KPLKR + +   + G    +G+ YE+LP FCY CGW+GH I EC +  + KE      L 
Sbjct: 182 KPLKRWLRLGLDRSGNIVVVGLKYERLPEFCYACGWLGHGISECPDTEAKKEAMEGATLR 241

Query: 246 YGPWMRESVKLK----------LP-EPNFQSRIMNQQAGRGRGIMEGRWRQQ 282
           +GPWMR  ++            +P E        N + G+ R I   RW+ Q
Sbjct: 242 FGPWMRAPIQRNRKISHHPSTGIPKEAASGETFYNLRGGKARRIDVFRWQNQ 290

[Close]

BLAST of Lag0002504.1 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.7e-37
Identity = 97/288 (33.68%), Postives = 150/288 (52.08%), Query Frame = 0


Query: 8   EAISSQLANLKVTEDEKASIFHLQENAIDTSEKKLVNALLC---KISTHRKINPEVFRGM 67
           + I+    + K T DE  ++   +   I T++    N  LC   K+ T ++I+ E  R +
Sbjct: 2   DEITDLWEHFKSTNDENETVTIDRGKPILTAD----NVKLCVVAKLHTSKRISAEAIRSV 61

Query: 68  MPRIWG-QEHTIIDHVGANVFLCKFRNARIKGFIQEGGPWFYDKSLLVFEEPRADINAED 127
           M  +W     T  + +G N+++  F++   K  +   GPW ++KSLLV   P A     D
Sbjct: 62  MKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLD 121

Query: 128 MEFRFVSFWIHFHKLPFACFDRASATEIGTLLGKVEKVDIDEDTDPKMGRSLRIKIQIDV 187
           M F F +FWI  H +PF C     A  +G  LG VE+++ D   D   G  +R++++IDV
Sbjct: 122 MNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGD-GADGWAGPFIRVRVKIDV 181

Query: 188 KKPLKRGIFMKSSKHGGERWIGITYEKLPNFCYGCGWIGHTIRECEEMLSSKEEDLP--Y 247
            KPL+RGI +K+S  G + W  + YEKLP+FCY CG IGH+ RECE+       + P  Y
Sbjct: 182 SKPLRRGIKLKNS-DGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQY 241

Query: 248 GPWMRES-VKLKLPEPNFQSRIMNQQAGRGRGIMEGRWRQQIYEDEDE 289
           G W+R + +K  +  P  +      + GRG  +  GR  +  +   DE
Sbjct: 242 GDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQVNGGRGGRGDWRRRDE 283

[Close]

BLAST of Lag0002504.1 vs. ExPASy TrEMBL
Match: A0A5C7GU64 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027487 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.4e-36
Identity = 88/300 (29.33%), Postives = 161/300 (53.67%), Query Frame = 0


Query: 7   AEAISSQLANLKVTEDEKASIFHLQENAIDTSEKKLVNALLCKISTHRKINPEVFRGMMP 66
           +EA  +QL      EDE A++  + E+ I   ++ +   L+ K+ T +K+N E F+G++ 
Sbjct: 2   SEAEITQLYENLSLEDEDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIE 61

Query: 67  RIWGQEHTI-IDHVGANVFLCKFRNARIKGFIQEGGPWFYDKSLLVFEEPRADINAEDME 126
           +IW Q   + ++ VG N F+  F N   +  +   GPW + KSL+V E+P+   +   ++
Sbjct: 62  QIWNQFGQVEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLK 121

Query: 127 FRFVSFWIHFHKLPFACFDRASATEIGTLLGKVEKVDIDEDTDPKMGRSLRIKIQIDVKK 186
           F    FW+  H +P  C ++ +   +   +G+V  V+I  ++    G+ +R+K+Q+D+ K
Sbjct: 122 FNQADFWVQIHDIPIMCMNQRTTKWLAEYIGEV--VEIPTESRECWGKYVRVKVQVDITK 181

Query: 187 PLKRGIFMKSSKHGGERWIGITYEKLPNFCYGCGWIGHTIRECEEMLSSKE----EDLPY 246
           PLKR + +K  K+     + + YE+LP+FC+ CG IGH++REC +  + +     +   +
Sbjct: 182 PLKRWLRIKLGKYEEITMVALKYERLPDFCFACGRIGHSVRECLDEDAKRAALDGQQTKF 241

Query: 247 GPWMRESVKLKLPEPNFQSRIMNQQAGRGRGIMEGRWRQQIYEDEDELNKGSLIDEKSRS 302
           G WMR +  +   +    S      + RGR + EG  R+   +    +  G++  +KSRS
Sbjct: 242 GSWMR-ATPIDKSKTKSISLTTGSSSERGRSV-EGS-RELEGDGSLSMRSGNVAPQKSRS 296

[Close]

BLAST of Lag0002504.1 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.8e-35
Identity = 81/244 (33.20%), Postives = 133/244 (54.51%), Query Frame = 0


Query: 8   EAISSQLANLKVTEDEKASIFHLQENAIDTSEKKLVNALLCKISTHRKINPEVFRGMMPR 67
           E + +     K+T +E      +  +A+  +E+ L  +L+ K+   R I+ +V   ++  
Sbjct: 4   ENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLL 63

Query: 68  IWGQEHTI-IDHVGANVFLCKFRNARIKGFIQEGGPWFYDKSLLVFEEPRADINAEDMEF 127
            W  EH + ++ +G N+FL  F        + + GPWF+DK+L+V ++P +  N  ++EF
Sbjct: 64  AWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEF 123

Query: 128 RFVSFWIHFHKLPFACFDRASATEIGTLLGKVEKVDIDEDTDPKMGRSLRIKIQIDVKKP 187
             V+FWIH   LP +  ++  A  +G  +G    VD +E      G SLRI++ ID+ KP
Sbjct: 124 NRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNE-KGFSWGASLRIRVLIDITKP 183

Query: 188 LKRGIFMKSSKHGGERWIGITYEKLPNFCYGCGWIGHTIRECEEMLSSKEED----LPYG 247
           L+RGI +      G  WI I YE+LP+FCY CG IGH+  +C+    + ++D      YG
Sbjct: 184 LRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYG 243

[Close]

BLAST of Lag0002504.1 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 43.9 bits (102), Expect = 4.4e-04
Identity = 31/128 (24.22%), Postives = 44/128 (34.38%), Query Frame = 0


Query: 101 GPWFYDKSLLVFEEPRADINAEDMEFRFVSFWIHFHKLPFACFDRASATEIGTLLGKVEK 160
           GPW ++  + V +  R      D EF+ + FWI    +P         T IG  +G   +
Sbjct: 79  GPWSFNDWMCVIQ--RWTKLHSDAEFKRIPFWIQIRGIPLRFLTARIITSIGERMGLFLE 138

Query: 161 VDIDEDTDPKMGRSLRIKIQIDVKKPLKRGIFMKSSKHGGERWIGITYEKLPNFCYGCGW 220
            ++  D          +K Q                           YEKL NFC  CG 
Sbjct: 139 TNLGRDVSV-------LKFQ---------------------------YEKLKNFCTTCGM 170

Query: 221 IGHTIREC 229
           + H   EC
Sbjct: 199 LSHDASEC 170

The following BLAST results are available for this feature:

BLAST of Lag0002504.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TXG54013.1	3.7e-37	36.36	hypothetical protein EZV62_019269 [Acer yangbiense]	[more]
XP_022149484.1	1.4e-36	33.68	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
TXG54301.1	1.4e-36	31.85	hypothetical protein EZV62_019557 [Acer yangbiense]	[more]
TXG48193.1	9.0e-36	29.33	hypothetical protein EZV62_027487 [Acer yangbiense]	[more]
XP_015382889.1	2.6e-35	36.67	uncharacterized protein LOC102626150 [Citrus sinensis]	[more]

BLAST of Lag0002504.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0002504.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5C7H9Y2	1.8e-37	36.36	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926...	[more]
A0A5C7HBM7	6.7e-37	31.85	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01955...	[more]
A0A6J1D765	6.7e-37	33.68	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5C7GU64	4.4e-36	29.33	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02748...	[more]
A0A6J1DU55	4.8e-35	33.20	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Lag0002504.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42140.1	4.4e-04	24.22	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 181..229 e-value: 5.0E-12 score: 45.3
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 37..166 e-value: 1.3E-19 score: 70.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 408..431
None	No IPR available	PANTHER	PTHR31286:SF62	SUBFAMILY NOT NAMED	coord: 68..427
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 68..427
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 215..230 score: 9.141752

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0002504	Lag0002504	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0002504.1.exon1	Lag0002504.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0002504.1	cds.Lag0002504.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0002504.1	Lag0002504.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding