Lag0001878.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAACAAAATCAACCGAATTCATCCCAAATCAAACCAACCCAGTTGTCAATTCGATGTAAATTCAAATGGGTTCTCTTCAAAATCCCCATTTTCAAAAGCTATAATCCCTTTTGAAAATCCTCTCGCTCATCGATTTCAACCCCTTCTTCAACCCTCCGAATTTGTCCTCTGCAACTTTTTCTTCCCCTTTTTCTTCGATTTCCCCTTCAATGGCGTCCCCGAATGCCGGATGGCCGAGAATGTTGCTCATCAGCTGCGTCCCTCTCAAAGCGTTCGTCAATGGCAGATGCCCCTCCGGCGTCTCCTCCGTCAGCTCCCACACGAACTCCGTCGGAAATGCTCTGTAATTGTACTGCTCCATTTCCGTATCCAGCTTCTTCATCCATCCGATTTTCATGAACAGCTTCGTGAAATCTCTGTTCACTTTCTCGAAAATCCGTTTCTGTACGCTGTACCCGAATTTCCCCTCGCTGTGTTTCTGCCACAGCTCGTCGATGGCTTTCAGATCGTCGGCGGCGATGAACTTCACTTCCGAGAAGTAGACATAGCCTCGTTTTTGCGCCGCGTCGCCGGCCAGCGCGATCAGAAGCCGGCGGGTCTCCTCGTCGGCTTGCCGGAAGTTTTTCTCGGCGAGGAGGCGGTCGAGCTCGTCGAAGGAGACGGCCGAGGCGGTATCCGCGGAGAGGGAGAAGGAACCGGCGGCAGCGGCAGAGAGAGAGGAAGTTGCGGCGGTGGCGGCAGTGGCGGCGGCGGTTGGGGTTGGTTTGAGGAAGAGAGAGGAGGAGGAGGAGGAGAGGGGAGTGGGAGAGAGGCTAGGGTGGTGGGGGCGGCGGAGAGAGTGGCGGAGAGATGGGAGAGAGTGGGAAGCTGCCATGGGAGAGAGAGAGAGAGAACAAAAAATGGCATGAAAATGGGAATTGGGATTTGGGGGTTTTTGAGAGAGTTTGTTTGA ATGAAGAACAAAATCAACCGAATTCATCCCAAATCAAACCAACCCAGTTGTCAATTCGATGTAAATTCAAATGGGTTCTCTTCAAAATCCCCATTTTCAAAAGCTATAATCCCTTTTGAAAATCCTCTCGCTCATCGATTTCAACCCCTTCTTCAACCCTCCGAATTTGTCCTCTGCAACTTTTTCTTCCCCTTTTTCTTCGATTTCCCCTTCAATGGCGTCCCCGAATGCCGGATGGCCGAGAATGTTGCTCATCAGCTGCGTCCCTCTCAAAGCGTTCGTCAATGGCAGATGCCCCTCCGGCGTCTCCTCCGTCAGCTCCCACACGAACTCCGTCGGAAATGCTCTGTAATTGTACTGCTCCATTTCCGTATCCAGCTTCTTCATCCATCCGATTTTCATGAACAGCTTCGTGAAATCTCTGTTCACTTTCTCGAAAATCCGTTTCTGTACGCTGTACCCGAATTTCCCCTCGCTGTGTTTCTGCCACAGCTCGTCGATGGCTTTCAGATCGTCGGCGGCGATGAACTTCACTTCCGAGAAGTAGACATAGCCTCGTTTTTGCGCCGCGTCGCCGGCCAGCGCGATCAGAAGCCGGCGGGTCTCCTCGTCGGCTTGCCGGAAGTTTTTCTCGGCGAGGAGGCGGTCGAGCTCGTCGAAGGAGACGGCCGAGGCGGTATCCGCGGAGAGGGAGAAGGAACCGGCGGCAGCGGCAGAGAGAGAGGAAGTTGCGGCGGTGGCGGCAGTGGCGGCGGCGGTTGGGGTTGGTTTGAGGAAGAGAGAGGAGGAGGAGGAGGAGAGGGGAGTGGGAGAGAGGCTAGGGTGGTGGGGGCGGCGGAGAGAGTGGCGGAGAGATGGGAGAGAGTGGGAAGCTGCCATGGGAGAGAGAGAGAGAGAACAAAAAATGGCATGAAAATGGGAATTGGGATTTGGGGGTTTTTGAGAGAGTTTGTTTGA ATGAAGAACAAAATCAACCGAATTCATCCCAAATCAAACCAACCCAGTTGTCAATTCGATGTAAATTCAAATGGGTTCTCTTCAAAATCCCCATTTTCAAAAGCTATAATCCCTTTTGAAAATCCTCTCGCTCATCGATTTCAACCCCTTCTTCAACCCTCCGAATTTGTCCTCTGCAACTTTTTCTTCCCCTTTTTCTTCGATTTCCCCTTCAATGGCGTCCCCGAATGCCGGATGGCCGAGAATGTTGCTCATCAGCTGCGTCCCTCTCAAAGCGTTCGTCAATGGCAGATGCCCCTCCGGCGTCTCCTCCGTCAGCTCCCACACGAACTCCGTCGGAAATGCTCTGTAATTGTACTGCTCCATTTCCGTATCCAGCTTCTTCATCCATCCGATTTTCATGAACAGCTTCGTGAAATCTCTGTTCACTTTCTCGAAAATCCGTTTCTGTACGCTGTACCCGAATTTCCCCTCGCTGTGTTTCTGCCACAGCTCGTCGATGGCTTTCAGATCGTCGGCGGCGATGAACTTCACTTCCGAGAAGTAGACATAGCCTCGTTTTTGCGCCGCGTCGCCGGCCAGCGCGATCAGAAGCCGGCGGGTCTCCTCGTCGGCTTGCCGGAAGTTTTTCTCGGCGAGGAGGCGGTCGAGCTCGTCGAAGGAGACGGCCGAGGCGGTATCCGCGGAGAGGGAGAAGGAACCGGCGGCAGCGGCAGAGAGAGAGGAAGTTGCGGCGGTGGCGGCAGTGGCGGCGGCGGTTGGGGTTGGTTTGAGGAAGAGAGAGGAGGAGGAGGAGGAGAGGGGAGTGGGAGAGAGGCTAGGGTGGTGGGGGCGGCGGAGAGAGTGGCGGAGAGATGGGAGAGAGTGGGAAGCTGCCATGGGAGAGAGAGAGAGAGAACAAAAAATGGCATGAAAATGGGAATTGGGATTTGGGGGTTTTTGAGAGAGTTTGTTTGA MKNKINRIHPKSNQPSCQFDVNSNGFSSKSPFSKAIIPFENPLAHRFQPLLQPSEFVLCNFFFPFFFDFPFNGVPECRMAENVAHQLRPSQSVRQWQMPLRRLLRQLPHELRRKCSVIVLLHFRIQLLHPSDFHEQLREISVHFLENPFLYAVPEFPLAVFLPQLVDGFQIVGGDELHFREVDIASFLRRVAGQRDQKPAGLLVGLPEVFLGEEAVELVEGDGRGGIRGEGEGTGGSGRERGSCGGGGSGGGGWGWFEEERGGGGGEGSGREARVVGAAERVAERWERVGSCHGRERERTKNGMKMGIGIWGFLREFV Homology
BLAST of Lag0001878.1 vs. NCBI nr
Match: PON64022.1 (hypothetical protein PanWU01x14_127890 [Parasponia andersonii]) HSP 1 Score: 137.1 bits (344), Expect = 2.6e-28 Identity = 87/173 (50.29%), Postives = 107/173 (61.85%), Query Frame = 0
BLAST of Lag0001878.1 vs. NCBI nr
Match: PON88682.1 (hypothetical protein TorRG33x02_155870 [Trema orientale]) HSP 1 Score: 132.5 bits (332), Expect = 6.4e-27 Identity = 83/160 (51.88%), Postives = 102/160 (63.75%), Query Frame = 0
BLAST of Lag0001878.1 vs. NCBI nr
Match: KAG6406072.1 (hypothetical protein SASPL_133669 [Salvia splendens]) HSP 1 Score: 126.7 bits (317), Expect = 3.5e-25 Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 0
BLAST of Lag0001878.1 vs. NCBI nr
Match: AQK39306.1 (hypothetical protein ZEAMMB73_Zm00001d023426 [Zea mays]) HSP 1 Score: 110.5 bits (275), Expect = 2.6e-20 Identity = 68/146 (46.58%), Postives = 92/146 (63.01%), Query Frame = 0
BLAST of Lag0001878.1 vs. NCBI nr
Match: CAG1833975.1 (unnamed protein product, partial [Musa acuminata subsp. malaccensis]) HSP 1 Score: 102.4 bits (254), Expect = 7.1e-18 Identity = 85/197 (43.15%), Postives = 111/197 (56.35%), Query Frame = 0
BLAST of Lag0001878.1 vs. ExPASy TrEMBL
Match: A0A0A0K9B6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042375 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 3.8e-41 Identity = 85/113 (75.22%), Postives = 102/113 (90.27%), Query Frame = 0
BLAST of Lag0001878.1 vs. ExPASy TrEMBL
Match: A0A2P5CSM0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_127890 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.3e-28 Identity = 87/173 (50.29%), Postives = 107/173 (61.85%), Query Frame = 0
BLAST of Lag0001878.1 vs. ExPASy TrEMBL
Match: A0A2P5ESZ6 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_155870 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 3.1e-27 Identity = 83/160 (51.88%), Postives = 102/160 (63.75%), Query Frame = 0
BLAST of Lag0001878.1 vs. ExPASy TrEMBL
Match: A0A1D6ITA8 (Uncharacterized protein OS=Zea mays OX=4577 GN=100275960 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.3e-20 Identity = 68/146 (46.58%), Postives = 92/146 (63.01%), Query Frame = 0
BLAST of Lag0001878.1 vs. ExPASy TrEMBL
Match: A0A4S8IDJ3 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb09t02240 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.7e-17 Identity = 85/214 (39.72%), Postives = 114/214 (53.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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