Lag0001878.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0001878.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionSREBP regulating gene protein
Locationchr4: 36469824 .. 36470780 (+)
Sequence length957
RNA-Seq ExpressionLag0001878.1
SyntenyLag0001878.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAACAAAATCAACCGAATTCATCCCAAATCAAACCAACCCAGTTGTCAATTCGATGTAAATTCAAATGGGTTCTCTTCAAAATCCCCATTTTCAAAAGCTATAATCCCTTTTGAAAATCCTCTCGCTCATCGATTTCAACCCCTTCTTCAACCCTCCGAATTTGTCCTCTGCAACTTTTTCTTCCCCTTTTTCTTCGATTTCCCCTTCAATGGCGTCCCCGAATGCCGGATGGCCGAGAATGTTGCTCATCAGCTGCGTCCCTCTCAAAGCGTTCGTCAATGGCAGATGCCCCTCCGGCGTCTCCTCCGTCAGCTCCCACACGAACTCCGTCGGAAATGCTCTGTAATTGTACTGCTCCATTTCCGTATCCAGCTTCTTCATCCATCCGATTTTCATGAACAGCTTCGTGAAATCTCTGTTCACTTTCTCGAAAATCCGTTTCTGTACGCTGTACCCGAATTTCCCCTCGCTGTGTTTCTGCCACAGCTCGTCGATGGCTTTCAGATCGTCGGCGGCGATGAACTTCACTTCCGAGAAGTAGACATAGCCTCGTTTTTGCGCCGCGTCGCCGGCCAGCGCGATCAGAAGCCGGCGGGTCTCCTCGTCGGCTTGCCGGAAGTTTTTCTCGGCGAGGAGGCGGTCGAGCTCGTCGAAGGAGACGGCCGAGGCGGTATCCGCGGAGAGGGAGAAGGAACCGGCGGCAGCGGCAGAGAGAGAGGAAGTTGCGGCGGTGGCGGCAGTGGCGGCGGCGGTTGGGGTTGGTTTGAGGAAGAGAGAGGAGGAGGAGGAGGAGAGGGGAGTGGGAGAGAGGCTAGGGTGGTGGGGGCGGCGGAGAGAGTGGCGGAGAGATGGGAGAGAGTGGGAAGCTGCCATGGGAGAGAGAGAGAGAGAACAAAAAATGGCATGAAAATGGGAATTGGGATTTGGGGGTTTTTGAGAGAGTTTGTTTGA

mRNA sequence

ATGAAGAACAAAATCAACCGAATTCATCCCAAATCAAACCAACCCAGTTGTCAATTCGATGTAAATTCAAATGGGTTCTCTTCAAAATCCCCATTTTCAAAAGCTATAATCCCTTTTGAAAATCCTCTCGCTCATCGATTTCAACCCCTTCTTCAACCCTCCGAATTTGTCCTCTGCAACTTTTTCTTCCCCTTTTTCTTCGATTTCCCCTTCAATGGCGTCCCCGAATGCCGGATGGCCGAGAATGTTGCTCATCAGCTGCGTCCCTCTCAAAGCGTTCGTCAATGGCAGATGCCCCTCCGGCGTCTCCTCCGTCAGCTCCCACACGAACTCCGTCGGAAATGCTCTGTAATTGTACTGCTCCATTTCCGTATCCAGCTTCTTCATCCATCCGATTTTCATGAACAGCTTCGTGAAATCTCTGTTCACTTTCTCGAAAATCCGTTTCTGTACGCTGTACCCGAATTTCCCCTCGCTGTGTTTCTGCCACAGCTCGTCGATGGCTTTCAGATCGTCGGCGGCGATGAACTTCACTTCCGAGAAGTAGACATAGCCTCGTTTTTGCGCCGCGTCGCCGGCCAGCGCGATCAGAAGCCGGCGGGTCTCCTCGTCGGCTTGCCGGAAGTTTTTCTCGGCGAGGAGGCGGTCGAGCTCGTCGAAGGAGACGGCCGAGGCGGTATCCGCGGAGAGGGAGAAGGAACCGGCGGCAGCGGCAGAGAGAGAGGAAGTTGCGGCGGTGGCGGCAGTGGCGGCGGCGGTTGGGGTTGGTTTGAGGAAGAGAGAGGAGGAGGAGGAGGAGAGGGGAGTGGGAGAGAGGCTAGGGTGGTGGGGGCGGCGGAGAGAGTGGCGGAGAGATGGGAGAGAGTGGGAAGCTGCCATGGGAGAGAGAGAGAGAGAACAAAAAATGGCATGAAAATGGGAATTGGGATTTGGGGGTTTTTGAGAGAGTTTGTTTGA

Coding sequence (CDS)

ATGAAGAACAAAATCAACCGAATTCATCCCAAATCAAACCAACCCAGTTGTCAATTCGATGTAAATTCAAATGGGTTCTCTTCAAAATCCCCATTTTCAAAAGCTATAATCCCTTTTGAAAATCCTCTCGCTCATCGATTTCAACCCCTTCTTCAACCCTCCGAATTTGTCCTCTGCAACTTTTTCTTCCCCTTTTTCTTCGATTTCCCCTTCAATGGCGTCCCCGAATGCCGGATGGCCGAGAATGTTGCTCATCAGCTGCGTCCCTCTCAAAGCGTTCGTCAATGGCAGATGCCCCTCCGGCGTCTCCTCCGTCAGCTCCCACACGAACTCCGTCGGAAATGCTCTGTAATTGTACTGCTCCATTTCCGTATCCAGCTTCTTCATCCATCCGATTTTCATGAACAGCTTCGTGAAATCTCTGTTCACTTTCTCGAAAATCCGTTTCTGTACGCTGTACCCGAATTTCCCCTCGCTGTGTTTCTGCCACAGCTCGTCGATGGCTTTCAGATCGTCGGCGGCGATGAACTTCACTTCCGAGAAGTAGACATAGCCTCGTTTTTGCGCCGCGTCGCCGGCCAGCGCGATCAGAAGCCGGCGGGTCTCCTCGTCGGCTTGCCGGAAGTTTTTCTCGGCGAGGAGGCGGTCGAGCTCGTCGAAGGAGACGGCCGAGGCGGTATCCGCGGAGAGGGAGAAGGAACCGGCGGCAGCGGCAGAGAGAGAGGAAGTTGCGGCGGTGGCGGCAGTGGCGGCGGCGGTTGGGGTTGGTTTGAGGAAGAGAGAGGAGGAGGAGGAGGAGAGGGGAGTGGGAGAGAGGCTAGGGTGGTGGGGGCGGCGGAGAGAGTGGCGGAGAGATGGGAGAGAGTGGGAAGCTGCCATGGGAGAGAGAGAGAGAGAACAAAAAATGGCATGAAAATGGGAATTGGGATTTGGGGGTTTTTGAGAGAGTTTGTTTGA

Protein sequence

MKNKINRIHPKSNQPSCQFDVNSNGFSSKSPFSKAIIPFENPLAHRFQPLLQPSEFVLCNFFFPFFFDFPFNGVPECRMAENVAHQLRPSQSVRQWQMPLRRLLRQLPHELRRKCSVIVLLHFRIQLLHPSDFHEQLREISVHFLENPFLYAVPEFPLAVFLPQLVDGFQIVGGDELHFREVDIASFLRRVAGQRDQKPAGLLVGLPEVFLGEEAVELVEGDGRGGIRGEGEGTGGSGRERGSCGGGGSGGGGWGWFEEERGGGGGEGSGREARVVGAAERVAERWERVGSCHGRERERTKNGMKMGIGIWGFLREFV
Homology
BLAST of Lag0001878.1 vs. NCBI nr
Match: PON64022.1 (hypothetical protein PanWU01x14_127890 [Parasponia andersonii])

HSP 1 Score: 137.1 bits (344), Expect = 2.6e-28
Identity = 87/173 (50.29%), Postives = 107/173 (61.85%), Query Frame = 0

Query: 79  MAENVAHQLRPSQSVRQWQMPLRRLLRQLPHELRRKCSVIVLLHFRIQLLHPSDFHEQLR 138
           M +    QL  SQ V Q Q+ L  ++ +LP++L  K  V+VLLH R+QLLHP D  E+LR
Sbjct: 1   MIQEAIKQLNSSQGVGQRQVTLGSVVVELPNKLAGKRPVVVLLHLRVQLLHPPDLDEELR 60

Query: 139 EISVHFLENPFLYAVPEFPLAVFLPQLVDGFQIVGGDELHFREVDIASFLRRVAGQRDQK 198
           E+ VH  E+P L+AVPE P AV  PQLVDGFQ+   DEL  RE  + S LR+ AGQ D++
Sbjct: 61  EVPVHLPEDPLLHAVPESPAAVACPQLVDGFQVRFRDELDLREEHVPSLLRQFAGQHDEE 120

Query: 199 PAGLLVGLPEVFLGEEAVELVEGDGRGGIRGEGEGTGGSGRERGSCGGGGSGG 252
            A LLVGLPE+  GE   E+VEG G GG      G GG       CGGGG  G
Sbjct: 121 AASLLVGLPEIGDGEVVPEVVEGRGGGG------GCGGC-----CCGGGGVWG 162

BLAST of Lag0001878.1 vs. NCBI nr
Match: PON88682.1 (hypothetical protein TorRG33x02_155870 [Trema orientale])

HSP 1 Score: 132.5 bits (332), Expect = 6.4e-27
Identity = 83/160 (51.88%), Postives = 102/160 (63.75%), Query Frame = 0

Query: 79  MAENVAHQLRPSQSVRQWQMPLRRLLRQLPHELRRKCSVIVLLHFRIQLLHPSDFHEQLR 138
           M +    QL  SQ V Q Q+ L  ++ +LP+EL  K  V+VLLH R+QLLHP D  E+ R
Sbjct: 1   MIQEAIKQLSSSQGVGQRQVTLGSVVVELPNELAGKRPVVVLLHLRVQLLHPPDLDEEPR 60

Query: 139 EISVHFLENPFLYAVPEFPLAVFLPQLVDGFQIVGGDELHFREVDIASFLRRVAGQRDQK 198
           E+ +H  E+P L+AVPE P AV  PQLVDGFQ+   DEL  RE  + S LR  AGQ D++
Sbjct: 61  EVPLHLPEDPPLHAVPESPAAVASPQLVDGFQVRFRDELDLREEHVPSLLRWFAGQHDEE 120

Query: 199 PAGLLVGLPEVFLGEEAVELVEGDGRGGIRGEGEGTGGSG 239
            AGLLV LPE+  GE A E+VEG G GG  G G   GG G
Sbjct: 121 AAGLLVCLPEIGGGEVAPEVVEGRGGGG--GGGCCCGGGG 158

BLAST of Lag0001878.1 vs. NCBI nr
Match: KAG6406072.1 (hypothetical protein SASPL_133669 [Salvia splendens])

HSP 1 Score: 126.7 bits (317), Expect = 3.5e-25
Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 0

Query: 98  MPLRRLLRQLPHELRRKCSVIVLLHFR-IQLLHPSDFHEQLREISVHFLENPFLYAVPEF 157
           MPLRR L  LPH+LRRK  VI+LLH R +QLLHP    E+ REI V FL NP L+AVPEF
Sbjct: 1   MPLRRPLLHLPHKLRRKAPVIILLHLRALQLLHPPHLDEERREIPVQFLPNPPLHAVPEF 60

Query: 158 PLAVFLPQLVDGFQIVGGDELHFREVDIASFLRRVAGQRDQKPAGLLVGLPEVFLGE 214
           PLAV  PQ VD  ++ GG+EL  RE D+A+    +AG+RD + A LLVGLPEV  GE
Sbjct: 61  PLAVLPPQRVDFPELRGGNELDLREEDVAALHGVLAGERDDEAARLLVGLPEVLSGE 117

BLAST of Lag0001878.1 vs. NCBI nr
Match: AQK39306.1 (hypothetical protein ZEAMMB73_Zm00001d023426 [Zea mays])

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-20
Identity = 68/146 (46.58%), Postives = 92/146 (63.01%), Query Frame = 0

Query: 76  ECRMAENVAHQLRPSQSVRQWQMPLRRLLRQLPHELRRKCSVIVLLHFRIQLLHPSDFHE 135
           E R+ E+V  +LR  + V + Q+ L R++RQLP EL  +  V+VLLH R+QL HP+D  E
Sbjct: 64  EGRVGEDVRQELRAPEGVGERQVSLGRVVRQLPQELVGEGPVVVLLHLRVQLPHPADPDE 123

Query: 136 QLREISVHFLENPFLYAVPEFPLAVFLPQLVDGFQIVGGDELHFREVDIASFLRRVAGQ- 195
           +  E++   L  P L+AVPE   AV LP+ VDG +++G DEL   E D+ S  R +AG+ 
Sbjct: 124 EAGEVAPRLLPEPPLHAVPEPAAAVLLPEPVDGGEVLGRDELDLGEEDVPSAPRGLAGEV 183

Query: 196 RDQKPAGLLVGLPEVFLGEEAVELVE 221
            DQ+P G LV LP V  GE A E VE
Sbjct: 184 DDQRPRG-LVRLPVVARGELAAEEVE 208

BLAST of Lag0001878.1 vs. NCBI nr
Match: CAG1833975.1 (unnamed protein product, partial [Musa acuminata subsp. malaccensis])

HSP 1 Score: 102.4 bits (254), Expect = 7.1e-18
Identity = 85/197 (43.15%), Postives = 111/197 (56.35%), Query Frame = 0

Query: 78  RMAENVAHQLRPSQSVRQWQMPLRRLLRQLPHELRRKCSVIVLLHFRIQLLHPSDFHEQL 137
           R+ +N A +L P + V Q ++PLR ++ +LP EL  +  V VLLH R+Q LHP    E+ 
Sbjct: 62  RVCQNAAEKLSPPEGVGQRKVPLRCVVLELPQELAGEGPVPVLLHLRVQPLHPPHPDEEA 121

Query: 138 REISVHFLENPFLYAVPEFPLAVFLPQLVDGFQIVGGDELHFREVDIASFLRRVAGQRDQ 197
           RE++   L  P L+A+PE   AV  PQLVD  ++    ELH RE  +   LR + G+RD+
Sbjct: 122 REVAARLLPQPPLHAIPEAAAAVPAPQLVDLLEVRSRYELHLREEHVPPLLRGLPGERDE 181

Query: 198 KPAGLLVGLPEVFLGEEAVELVEGDGRGGIR-GEGEGTGGSGRERGSCGGGGSGG----- 257
           + A LLVGL EV   + A E VE  GRG    G    T G G   G  GGGG GG     
Sbjct: 182 EAARLLVGLSEVARRQVAGEDVEWRGRGSCACGGWYHTTGRG---GGQGGGGGGGEVEEQ 241

Query: 258 -GGWGWFEEERGGGGGE 268
             G+G  EE+R G GGE
Sbjct: 242 LEGFGRLEEDRVGRGGE 255

BLAST of Lag0001878.1 vs. ExPASy TrEMBL
Match: A0A0A0K9B6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042375 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.8e-41
Identity = 85/113 (75.22%), Postives = 102/113 (90.27%), Query Frame = 0

Query: 98  MPLRRLLRQLPHELRRKCSVIVLLHFRIQLLHPSDFHEQLREISVHFLENPFLYAVPEFP 157
           MP RR+LRQLP++LRRKCSVIVLL+FRIQLLHP+ FH+Q REI VHFLENPFLYAVP+FP
Sbjct: 1   MPFRRVLRQLPNKLRRKCSVIVLLNFRIQLLHPTKFHKQFREIFVHFLENPFLYAVPKFP 60

Query: 158 LAVFLPQLVDGFQIVGGDELHFREVDIASFLRRVAGQRDQKPAGLLVGLPEVF 211
           +AVFLPQ+V+GFQI+GG+EL+F E+D+ SF    AG+ DQKPAGLLVGLP+VF
Sbjct: 61  IAVFLPQIVNGFQILGGNELNFGEIDVPSFQGAFAGEGDQKPAGLLVGLPKVF 113

BLAST of Lag0001878.1 vs. ExPASy TrEMBL
Match: A0A2P5CSM0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_127890 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.3e-28
Identity = 87/173 (50.29%), Postives = 107/173 (61.85%), Query Frame = 0

Query: 79  MAENVAHQLRPSQSVRQWQMPLRRLLRQLPHELRRKCSVIVLLHFRIQLLHPSDFHEQLR 138
           M +    QL  SQ V Q Q+ L  ++ +LP++L  K  V+VLLH R+QLLHP D  E+LR
Sbjct: 1   MIQEAIKQLNSSQGVGQRQVTLGSVVVELPNKLAGKRPVVVLLHLRVQLLHPPDLDEELR 60

Query: 139 EISVHFLENPFLYAVPEFPLAVFLPQLVDGFQIVGGDELHFREVDIASFLRRVAGQRDQK 198
           E+ VH  E+P L+AVPE P AV  PQLVDGFQ+   DEL  RE  + S LR+ AGQ D++
Sbjct: 61  EVPVHLPEDPLLHAVPESPAAVACPQLVDGFQVRFRDELDLREEHVPSLLRQFAGQHDEE 120

Query: 199 PAGLLVGLPEVFLGEEAVELVEGDGRGGIRGEGEGTGGSGRERGSCGGGGSGG 252
            A LLVGLPE+  GE   E+VEG G GG      G GG       CGGGG  G
Sbjct: 121 AASLLVGLPEIGDGEVVPEVVEGRGGGG------GCGGC-----CCGGGGVWG 162

BLAST of Lag0001878.1 vs. ExPASy TrEMBL
Match: A0A2P5ESZ6 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_155870 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.1e-27
Identity = 83/160 (51.88%), Postives = 102/160 (63.75%), Query Frame = 0

Query: 79  MAENVAHQLRPSQSVRQWQMPLRRLLRQLPHELRRKCSVIVLLHFRIQLLHPSDFHEQLR 138
           M +    QL  SQ V Q Q+ L  ++ +LP+EL  K  V+VLLH R+QLLHP D  E+ R
Sbjct: 1   MIQEAIKQLSSSQGVGQRQVTLGSVVVELPNELAGKRPVVVLLHLRVQLLHPPDLDEEPR 60

Query: 139 EISVHFLENPFLYAVPEFPLAVFLPQLVDGFQIVGGDELHFREVDIASFLRRVAGQRDQK 198
           E+ +H  E+P L+AVPE P AV  PQLVDGFQ+   DEL  RE  + S LR  AGQ D++
Sbjct: 61  EVPLHLPEDPPLHAVPESPAAVASPQLVDGFQVRFRDELDLREEHVPSLLRWFAGQHDEE 120

Query: 199 PAGLLVGLPEVFLGEEAVELVEGDGRGGIRGEGEGTGGSG 239
            AGLLV LPE+  GE A E+VEG G GG  G G   GG G
Sbjct: 121 AAGLLVCLPEIGGGEVAPEVVEGRGGGG--GGGCCCGGGG 158

BLAST of Lag0001878.1 vs. ExPASy TrEMBL
Match: A0A1D6ITA8 (Uncharacterized protein OS=Zea mays OX=4577 GN=100275960 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-20
Identity = 68/146 (46.58%), Postives = 92/146 (63.01%), Query Frame = 0

Query: 76  ECRMAENVAHQLRPSQSVRQWQMPLRRLLRQLPHELRRKCSVIVLLHFRIQLLHPSDFHE 135
           E R+ E+V  +LR  + V + Q+ L R++RQLP EL  +  V+VLLH R+QL HP+D  E
Sbjct: 64  EGRVGEDVRQELRAPEGVGERQVSLGRVVRQLPQELVGEGPVVVLLHLRVQLPHPADPDE 123

Query: 136 QLREISVHFLENPFLYAVPEFPLAVFLPQLVDGFQIVGGDELHFREVDIASFLRRVAGQ- 195
           +  E++   L  P L+AVPE   AV LP+ VDG +++G DEL   E D+ S  R +AG+ 
Sbjct: 124 EAGEVAPRLLPEPPLHAVPEPAAAVLLPEPVDGGEVLGRDELDLGEEDVPSAPRGLAGEV 183

Query: 196 RDQKPAGLLVGLPEVFLGEEAVELVE 221
            DQ+P G LV LP V  GE A E VE
Sbjct: 184 DDQRPRG-LVRLPVVARGELAAEEVE 208

BLAST of Lag0001878.1 vs. ExPASy TrEMBL
Match: A0A4S8IDJ3 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb09t02240 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-17
Identity = 85/214 (39.72%), Postives = 114/214 (53.27%), Query Frame = 0

Query: 62  FFPFFFDFPFNGVPECRMAENVAHQLRPSQSVRQWQMPLRRLLRQLPHELRRKCSVIVLL 121
           F    F F   G+ + R+ +N A +L P + V Q ++PLR ++ +LP EL R+  V VLL
Sbjct: 40  FLTLLFPFLCLGLLKRRVCQNAAEKLSPPEGVGQRKVPLRCVVLELPQELAREGPVPVLL 99

Query: 122 HFRIQLLHPSDFHEQLREISVHFLENPFLYAVPEFPLAVFLPQLVDGFQIVGGDELHFRE 181
           H R+Q LHP    E+ RE++   L    L+A+PE   AV  PQLVD  ++    ELH RE
Sbjct: 100 HLRVQPLHPPHPDEEAREVAARLLPQTPLHAIPEATAAVPAPQLVDLLEVRSRYELHLRE 159

Query: 182 VDIASFLRRVAGQRDQKPAGLLVGLPEVFLGEEAVELVEGDGRGGIRGEGEGTGGSGRER 241
            ++   LR + G+RD++ A LLVGL EV   + A E VE  G           GG     
Sbjct: 160 ENVPPLLRGLPGERDEEAARLLVGLSEVARRQVAGEDVEWRG-----SRSCACGGWCHTT 219

Query: 242 GSCGGGGSGGG--------GWGWFEEERGGGGGE 268
           G  GG G GGG        G+G  EE+R G GGE
Sbjct: 220 GRGGGQGGGGGGEVEEEVEGFGRLEEDRVGRGGE 248

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON64022.12.6e-2850.29hypothetical protein PanWU01x14_127890 [Parasponia andersonii][more]
PON88682.16.4e-2751.88hypothetical protein TorRG33x02_155870 [Trema orientale][more]
KAG6406072.13.5e-2559.83hypothetical protein SASPL_133669 [Salvia splendens][more]
AQK39306.12.6e-2046.58hypothetical protein ZEAMMB73_Zm00001d023426 [Zea mays][more]
CAG1833975.17.1e-1843.15unnamed protein product, partial [Musa acuminata subsp. malaccensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K9B63.8e-4175.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042375 PE=4 SV=1[more]
A0A2P5CSM01.3e-2850.29Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_127890 PE... [more]
A0A2P5ESZ63.1e-2751.88Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_155870 PE=4 SV... [more]
A0A1D6ITA81.3e-2046.58Uncharacterized protein OS=Zea mays OX=4577 GN=100275960 PE=4 SV=1[more]
A0A4S8IDJ31.7e-1739.72Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb09t02240 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..273

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0001878Lag0001878gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0001878.1.exon1Lag0001878.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0001878.1cds.Lag0001878.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0001878.1Lag0001878.1-proteinpolypeptide