Lag0001421.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001421.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CCHC-type domain-containing protein
Location	chr4: 31082051 .. 31083938 (+)
Sequence length	1593
RNA-Seq Expression	Lag0001421.1
Synteny	Lag0001421.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGAAAGGGGCAACCACATGGTTTGCAGAAGGGAGAACGTAGCAAATCAAACGGGCAACCACATGGTTTGCGACCAGGAAATGGGAAGCACAGAAACGGGTCCAACGGAAACGAAAGAACAGGCTATGATCGAAAGAAGCGCTCAAGCAAGCGAAGCGGAAGAAATAATCGAAGCTACCGAGGGAAACGAAACCAGTAAACAACAGACGCTAGACAAAGACGAAGAAGAAGTGTTCAGACAGTTAGAAAAGCTAAAAATTGACGAAGAAAGAAGAATAGTGGAAATTGAAGATGACGACATTGAAGAACTGGACGAAGAGTACAAGAGCTCGATTGCAGTTAAAATCCTTACGACAAAGCTCATCAATCCAGAATTTTTCTCATACATAATGCCACGAATATGGGGAATAGAGGGAGCAGTGAAAATGGAGAAAGCAGGAACAAACGTGTACCTATGCAAATTTAGAAGGTTGAAGGATAAAACAAGAATCATACGAGCAGGACCTTGGACCTACGACGATGCAATCCTCATTTTTGAAGAACCCAAAGGGAGTAGCAGCGCAGAGAACTGGAATTTTAATTATGTTTCTTTTTGGATACACTTCTATAAACTACCTCGTGTTTGTTATTGCAGGAAATATGCAATTGCTTGGGGAACTCTATAGGAGAATTTGAAGAAGCCGAATCAGACGAGAACGGAAAGATGAAGGGTGAAACACTGAGGGTCAAAGTAAAAATAAATGTGGTAGAACCCCTAAAAAGAGGAACAAACGTGAAAATCGGATCGAAGGCGGAGAAAATTTGGATACCGATTTCATATGAGAAATTACCGGATTTTTGTTACTTTTGTGGGAGACTGGGACATGTGTCCCAAGAATGTGGAGAAGAAGGAGCTAAAAATGCAAAGGAAAAACCTTATGGGGTGGAAATGCGAGAAACTAAAGGGAGTAAAGGAATATACAAGGGTTGGACACCAGAACAGAGGACAAACACTCATTTCCAAAGAGGCAGAGGCGAGGAATATGGGGAAGAGGTGGAAGATTAGGAGTCCATCACAAAAAGAAAACAAAGTAGAAGAAAACCATTGGCGAGCCCAGCAACCCAGAGACAACCCGAATAAAGGAAAAGACCATAGTAACCGGAAAAACAGAACAGAGGAAGAAAACCAAGTGCTCAAAATGTGAATCAAAGAGAAGATGAAGGAAACAACGATCAGCCAAACAGAACAGAATACCCCGGAAAAAAGGAACCGCCGGCGGAACGATCTGCTATGGTAGAAGAAGTCTCCGACACCGGCAATCCTGAAGCGGTGGAACAAAACCCAAGGACGATGATGGAAATCCAAACGGCTATTGACACCAAGGAGGATAAAGGGGACAAATCTCTGGGAAAAGGACAGAAAGGAAAAGAAGAAAAAAGTGCAGTCGTATCTGAAATAAAAAGAGACAAAGGAAAATGGATAGACCAAAAGAAAATTGATAACGGGCCAAACTATACAATGGGCCTAAAAATAAAGCTATCCAACAAGAAATTTCTATTTATCCAGAGATAAACTTGAGTCTTCGAAGAAGGGAAGAAAAGGAAGAAAAGGAGTCTGATGACAAGGATAAGGCCAACAAAGTGCATATGATAATGGATTACCACCAAGAGGGAAATCCAACAGAAAGGAAACTGGGGAACCCTCGGACGATCAAAAGAAGGGCCCGGGAAGGAAAAAACAGCCAAGAAAATGGAGAAAGTATTATGAGATTTGAACAAAAAGGAAAACATGAAAGGGATCAGAAAGAGGAAGAAAGCCAGTCTAAGAGGAGTCGCTTAAACTACTTCGGCAAGACCGTTGGGATATCGGCGGAGGCTGCGGAGCAGCCCCGCCGGACGCCATGA

mRNA sequence

ATGGACGAAAGGGGCAACCACATGGTTTGCAGAAGGGAGAACGTAGCAAATCAAACGGGCAACCACATGGTTTGCGACCAGGAAATGGGAAGCACAGAAACGGGTCCAACGGAAACGAAAGAACAGGCTATGATCGAAAGAAGCGCTCAAGCAAGCGAAGCGGAAGAAATAATCGAAGCTACCGAGGGAAACGAAACCAGTAAACAACAGACGCTAGACAAAGACGAAGAAGAAGTGTTCAGACAGTTAGAAAAGCTAAAAATTGACGAAGAAAGAAGAATAGTGGAAATTGAAGATGACGACATTGAAGAACTGGACGAAGAGTACAAGAGCTCGATTGCAGTTAAAATCCTTACGACAAAGCTCATCAATCCAGAATTTTTCTCATACATAATGCCACGAATATGGGGAATAGAGGGAGCAGTGAAAATGGAGAAAGCAGGAACAAACGTGTACCTATGCAAATTTAGAAGGTTGAAGGATAAAACAAGAATCATACGAGCAGGACCTTGGACCTACGACGATGCAATCCTCATTTTTGAAGAACCCAAAGGGAGTAGCAGCGCAGAGAACTGGAATTTTAATTATGAAATATGCAATTGCTTGGGGAACTCTATAGGAGAATTTGAAGAAGCCGAATCAGACGAGAACGGAAAGATGAAGGGTGAAACACTGAGGGTCAAAGTAAAAATAAATGTGGTAGAACCCCTAAAAAGAGGAACAAACGTGAAAATCGGATCGAAGGCGGAGAAAATTTGGATACCGATTTCATATGAGAAATTACCGGATTTTTGTTACTTTTGTGGGAGACTGGGACATGTGTCCCAAGAATGTGGAGAAGAAGGAGCTAAAAATGCAAAGGAAAAACCTTATGGGGTGGAAATGCGAGAAACTAAAGGGAGTAAAGGAATATACAAGGGTTGGACACCAGAACAGAGGACAAACACTCATTTCCAAAGAGGCAGAGGCGAGGAATATGGGGAAGAGAACAGAGGAAGAAAACCAAGTGCTCAAAATGTGAATCAAAGAGAAGATGAAGGAAACAACGATCAGCCAAACAGAACAGAATACCCCGGAAAAAAGGAACCGCCGGCGGAACGATCTGCTATGGTAGAAGAAGTCTCCGACACCGGCAATCCTGAAGCGGTGGAACAAAACCCAAGGACGATGATGGAAATCCAAACGGCTATTGACACCAAGGAGGATAAAGGGGACAAATCTCTGGGAAAAGGACAGAAAGGAAAAGAAGAAAAAAAGATAAACTTGAGTCTTCGAAGAAGGGAAGAAAAGGAAGAAAAGGAGTCTGATGACAAGGATAAGGCCAACAAAGTGCATATGATAATGGATTACCACCAAGAGGGAAATCCAACAGAAAGGAAACTGGGGAACCCTCGGACGATCAAAAGAAGGGCCCGGGAAGGAAAAAACAGCCAAGAAAATGGAGAAAGTATTATGAGATTTGAACAAAAAGGAAAACATGAAAGGGATCAGAAAGAGGAAGAAAGCCAGTCTAAGAGGAGTCGCTTAAACTACTTCGGCAAGACCGTTGGGATATCGGCGGAGGCTGCGGAGCAGCCCCGCCGGACGCCATGA

Coding sequence (CDS)

ATGGACGAAAGGGGCAACCACATGGTTTGCAGAAGGGAGAACGTAGCAAATCAAACGGGCAACCACATGGTTTGCGACCAGGAAATGGGAAGCACAGAAACGGGTCCAACGGAAACGAAAGAACAGGCTATGATCGAAAGAAGCGCTCAAGCAAGCGAAGCGGAAGAAATAATCGAAGCTACCGAGGGAAACGAAACCAGTAAACAACAGACGCTAGACAAAGACGAAGAAGAAGTGTTCAGACAGTTAGAAAAGCTAAAAATTGACGAAGAAAGAAGAATAGTGGAAATTGAAGATGACGACATTGAAGAACTGGACGAAGAGTACAAGAGCTCGATTGCAGTTAAAATCCTTACGACAAAGCTCATCAATCCAGAATTTTTCTCATACATAATGCCACGAATATGGGGAATAGAGGGAGCAGTGAAAATGGAGAAAGCAGGAACAAACGTGTACCTATGCAAATTTAGAAGGTTGAAGGATAAAACAAGAATCATACGAGCAGGACCTTGGACCTACGACGATGCAATCCTCATTTTTGAAGAACCCAAAGGGAGTAGCAGCGCAGAGAACTGGAATTTTAATTATGAAATATGCAATTGCTTGGGGAACTCTATAGGAGAATTTGAAGAAGCCGAATCAGACGAGAACGGAAAGATGAAGGGTGAAACACTGAGGGTCAAAGTAAAAATAAATGTGGTAGAACCCCTAAAAAGAGGAACAAACGTGAAAATCGGATCGAAGGCGGAGAAAATTTGGATACCGATTTCATATGAGAAATTACCGGATTTTTGTTACTTTTGTGGGAGACTGGGACATGTGTCCCAAGAATGTGGAGAAGAAGGAGCTAAAAATGCAAAGGAAAAACCTTATGGGGTGGAAATGCGAGAAACTAAAGGGAGTAAAGGAATATACAAGGGTTGGACACCAGAACAGAGGACAAACACTCATTTCCAAAGAGGCAGAGGCGAGGAATATGGGGAAGAGAACAGAGGAAGAAAACCAAGTGCTCAAAATGTGAATCAAAGAGAAGATGAAGGAAACAACGATCAGCCAAACAGAACAGAATACCCCGGAAAAAAGGAACCGCCGGCGGAACGATCTGCTATGGTAGAAGAAGTCTCCGACACCGGCAATCCTGAAGCGGTGGAACAAAACCCAAGGACGATGATGGAAATCCAAACGGCTATTGACACCAAGGAGGATAAAGGGGACAAATCTCTGGGAAAAGGACAGAAAGGAAAAGAAGAAAAAAAGATAAACTTGAGTCTTCGAAGAAGGGAAGAAAAGGAAGAAAAGGAGTCTGATGACAAGGATAAGGCCAACAAAGTGCATATGATAATGGATTACCACCAAGAGGGAAATCCAACAGAAAGGAAACTGGGGAACCCTCGGACGATCAAAAGAAGGGCCCGGGAAGGAAAAAACAGCCAAGAAAATGGAGAAAGTATTATGAGATTTGAACAAAAAGGAAAACATGAAAGGGATCAGAAAGAGGAAGAAAGCCAGTCTAAGAGGAGTCGCTTAAACTACTTCGGCAAGACCGTTGGGATATCGGCGGAGGCTGCGGAGCAGCCCCGCCGGACGCCATGA

Protein sequence

MDERGNHMVCRRENVANQTGNHMVCDQEMGSTETGPTETKEQAMIERSAQASEAEEIIEATEGNETSKQQTLDKDEEEVFRQLEKLKIDEERRIVEIEDDDIEELDEEYKSSIAVKILTTKLINPEFFSYIMPRIWGIEGAVKMEKAGTNVYLCKFRRLKDKTRIIRAGPWTYDDAILIFEEPKGSSSAENWNFNYEICNCLGNSIGEFEEAESDENGKMKGETLRVKVKINVVEPLKRGTNVKIGSKAEKIWIPISYEKLPDFCYFCGRLGHVSQECGEEGAKNAKEKPYGVEMRETKGSKGIYKGWTPEQRTNTHFQRGRGEEYGEENRGRKPSAQNVNQREDEGNNDQPNRTEYPGKKEPPAERSAMVEEVSDTGNPEAVEQNPRTMMEIQTAIDTKEDKGDKSLGKGQKGKEEKKINLSLRRREEKEEKESDDKDKANKVHMIMDYHQEGNPTERKLGNPRTIKRRAREGKNSQENGESIMRFEQKGKHERDQKEEESQSKRSRLNYFGKTVGISAEAAEQPRRTP

Homology

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BLAST of Lag0001421.1 vs. NCBI nr
Match: VVA32948.1 (PREDICTED: DUF4283 domain-containing [Prunus dulcis])

HSP 1 Score: 141.7 bits (356), Expect = 1.8e-29
Identity = 94/296 (31.76%), Postives = 149/296 (50.34%), Query Frame = 0


Query: 77  EEVFRQLEKLKI--DEERRIVEIEDDDIEELDEEYKSSIAVKILTTKLINPEFFSYIMPR 136
           +EV   LEK  I  ++ER  +++  +DI+++ E  K S+  K+LTT   N E F   M +
Sbjct: 2   DEVINSLEKTLILTEDERDAIQVRQNDIDDVGERLKMSLVGKVLTTTAFNREAFKQTMLK 61

Query: 137 IWGIEGAVKMEKAGTNVYLCKFRRLKDKTRIIRAGPWTYDDAILIFEEPKGSSSAENWNF 196
           IW     V ++  G N++L  F    D+ R++R+GPW +D A+++ E P GS +      
Sbjct: 62  IWSTVREVVVKDIGENLFLFIFATEGDRLRVLRSGPWNFDKALVLLETPDGSIAPSKMLL 121

Query: 197 NY-----------------EICNCLGNSIGEFEEAESDENGKMKGETLRVKVKINVVEPL 256
            Y                  +   +GNS G   +     +GK  G  LR++V ++V +PL
Sbjct: 122 KYADFWIQVHNVPLSCMSTNLGRQIGNSFGRCLDVIEGMDGKCLGRFLRLRVSVDVSKPL 181

Query: 257 KRGTNVKIGSKAEKIWIPISYEKLPDFCYFCGRLGHVSQECG--EEGAKNAKEKPYGVEM 316
           +RG  + + S    +++   YE+LP+FC+ CGRLGHV +EC   ++ AK A EKPYG  +
Sbjct: 182 RRGKKMTLPS-GNTVFVEFRYERLPEFCFCCGRLGHVFKECSFVDQAAKQADEKPYGSWL 241

Query: 317 RETKGSKGIYKGWTPEQRTNTHFQRGRGEEYGEENRGRKPSAQNVNQREDEGNNDQ 352
           + TK    I  G    +RTN     G G E   E  G K     V  ++   + ++
Sbjct: 242 KATKDFHSIRAG--NPKRTN-----GSGSE--AEGDGAKEKEMEVEGQQSNSSGEK 287

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BLAST of Lag0001421.1 vs. NCBI nr
Match: TXG53482.1 (hypothetical protein EZV62_022651 [Acer yangbiense])

HSP 1 Score: 139.8 bits (351), Expect = 6.7e-29
Identity = 81/255 (31.76%), Postives = 128/255 (50.20%), Query Frame = 0


Query: 113 IAVKILTTKLINPEFFSYIMPRIWGIEGAVKMEKAGTNVYLCKFRRLKDKTRIIRAGPWT 172
           +A KIL+  L+N + F  ++ RIW + G V++E    NVY   F+  +D+ ++  +GPW 
Sbjct: 5   LAGKILSPDLVNRDAFRSLISRIWKVRGGVEIEVVTNNVYAFHFQLSEDRRKVFTSGPWN 64

Query: 173 YDDAILIFEEPKGSSSAENWNFN-----------------YEICNCLGNSIGEFEEAESD 232
           +DD++++ EEP G+ S +   F+                  EI   LG  IGE  E +S 
Sbjct: 65  FDDSLIVLEEPTGTGSIKGLKFDRVDFWVQISNLPMLCMTKEIAEFLGGIIGEVREVDSG 124

Query: 233 ENGKMKGETLRVKVKINVVEPLKRGTNVKIGSKAEKIWIPISYEKLPDFCYFCGRLGHVS 292
             G   G+ +RV+V +++ +PL+R  +V +    E+  +PI YE+LP FC+ CG LGH  
Sbjct: 125 PTGDCLGKFVRVRVAVDITKPLRRFLHVDVLGDEEETVMPIQYERLPSFCFRCGLLGHTV 184

Query: 293 QECGE---EGAKNAKEKPYGVEMRETKGSKGI-YKGWTPE------QRTNTHFQRGRGEE 341
             C E       N+K+  YG  MR T   K +  + W P       +R N   + GRG  
Sbjct: 185 HGCPEGDCHSPINSKDFLYGAWMRATIPPKPVGNREWNPRYNSGNVRRPNYGLEGGRGRN 244

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BLAST of Lag0001421.1 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 139.8 bits (351), Expect = 6.7e-29
Identity = 88/290 (30.34%), Postives = 140/290 (48.28%), Query Frame = 0


Query: 107 EEYKSSIAVKILTTKLINPEFFSYIMPRIWGIEGAVKMEKAGTNVYLCKFRRLKDKTRII 166
           +  K  +  K+ T+K I+ E    +M  +W +  + + E  G N+Y+  F+ L +K+R++
Sbjct: 33  DNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVL 92

Query: 167 RAGPWTYDDAILIFEEPKGSSSAENWNFNY-----------------EICNCLGNSIGEF 226
            +GPWT++ ++L+   P  ++   + NFN+                 E+ N LG  +G+ 
Sbjct: 93  SSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLGDV 152

Query: 227 EEAESDENGKMKGETLRVKVKINVVEPLKRGTNVKIGSKAEKIWIPISYEKLPDFCYFCG 286
           EE E D      G  +RV+VKI+V +PL+RG  +K  S  + IW P+ YEKLPDFCY CG
Sbjct: 153 EEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLK-NSDGKDIWCPLRYEKLPDFCYECG 212

Query: 287 RLGHVSQECGEEGAKNAKEKP--YGVEMRETKGSKGIYKGWTPEQRTNTHFQR-GRGEEY 346
           ++GH  +EC +         P  YG  +R T   K +     PE+       R GRG + 
Sbjct: 213 KIGHSGRECEQRSKVVTTNSPEQYGDWLRATLLKKSVSH---PEEEVFWRGGRFGRGHQV 272

Query: 347 GEENRGRKP-SAQNVNQREDEGNNDQPNRTEYPGKKEPPAERSAMVEEVS 376
                GR     ++ N R+ +G      R    G    P E S    E++
Sbjct: 273 NGGRGGRGDWRRRDENWRDIDGPESSHRRAVEEGVDRVPNEESVTAAEIT 318

[Close]

BLAST of Lag0001421.1 vs. NCBI nr
Match: XP_015380691.1 (uncharacterized protein LOC107174364 [Citrus sinensis])

HSP 1 Score: 138.3 bits (347), Expect = 2.0e-28
Identity = 70/198 (35.35%), Postives = 107/198 (54.04%), Query Frame = 0


Query: 116 KILTTKLINPEFFSYIMPRIWGIEGAVKMEKAGTNVYLCKFRRLKDKTRIIRAGPWTYDD 175
           K+L T+ +N E F   + ++W     VK+E  G N ++ KF    DK R++  GPW +D 
Sbjct: 22  KVLLTRAVNKEGFKSALQQVWRTVKEVKIESLGNNCFMFKFTEEADKKRVLTGGPWHFDR 81

Query: 176 AILIFEEPKGSSSAENWNFNY-----------------EICNCLGNSIGEFEEAESDENG 235
           A+L+  EPKG       +F +                 E+   LG  IG  EE E+DENG
Sbjct: 82  ALLVLTEPKGIGELTKQSFTHTAFWIQIRNVPIACMEKELIQELGGMIGAVEEIETDENG 141

Query: 236 KMKGETLRVKVKINVVEPLKRGTNVKIGSKAEKIWIPISYEKLPDFCYFCGRLGHVSQEC 295
           +  GE  R++V IN+  PLK+   +K   +++ I +P+ YE+LPDFCY CG +GH  +EC
Sbjct: 142 ECLGEFARIRVLINITLPLKKILFLKQEGESD-IQMPVVYERLPDFCYCCGIIGHQYKEC 201

Query: 296 GEEGAKNAKEKPYGVEMR 297
            +   +  ++ PYG  M+
Sbjct: 202 AKFQGQQKEQLPYGGWMK 218

[Close]

BLAST of Lag0001421.1 vs. NCBI nr
Match: TXG48431.1 (hypothetical protein EZV62_027725 [Acer yangbiense])

HSP 1 Score: 137.5 bits (345), Expect = 3.3e-28
Identity = 69/206 (33.50%), Postives = 110/206 (53.40%), Query Frame = 0


Query: 113 IAVKILTTKLINPEFFSYIMPRIWGIEGAVKMEKAGTNVYLCKFRRLKDKTRIIRAGPWT 172
           +A KIL+ + IN E F  ++ RIW ++G V++E   TN+Y   F+   D+ R+   GPW+
Sbjct: 29  LAGKILSRESINREAFRSLIARIWKVQGGVEIEVISTNIYAFPFQSFDDRKRVFMGGPWS 88

Query: 173 YDDAILIFEEPKGSSSAENWNFN-----------------YEICNCLGNSIGEFEEAESD 232
           +D A+++ EEP+G  +  +  FN                  +I   LG+ IGE  E +  
Sbjct: 89  FDGALIVLEEPEGKGAINSLLFNSVDFWVHITNVPMIYMTKDIGKFLGSIIGEVREVDVG 148

Query: 233 ENGKMKGETLRVKVKINVVEPLKRGTNVKIGSKAEKIWIPISYEKLPDFCYFCGRLGHVS 292
            +    G+ +RV+V + V +PL+R   V +    E+  +PI YE+LP FC+ CG +GH+ 
Sbjct: 149 PSSDCLGKFMRVRVAVEVDKPLRRFLRVDVLGDGEETVMPIQYERLPSFCFLCGLVGHLV 208

Query: 293 QEC---GEEGAKNAKEKPYGVEMRET 299
            EC   GE+G +      YG  +R T
Sbjct: 209 HECTSYGEDGLREGSGMVYGAWLRAT 234

[Close]

BLAST of Lag0001421.1 vs. ExPASy TrEMBL
Match: A0A5E4G034 (PREDICTED: DUF4283 domain-containing OS=Prunus dulcis OX=3755 GN=ALMOND_2B021569 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.6e-30
Identity = 94/296 (31.76%), Postives = 149/296 (50.34%), Query Frame = 0


Query: 77  EEVFRQLEKLKI--DEERRIVEIEDDDIEELDEEYKSSIAVKILTTKLINPEFFSYIMPR 136
           +EV   LEK  I  ++ER  +++  +DI+++ E  K S+  K+LTT   N E F   M +
Sbjct: 2   DEVINSLEKTLILTEDERDAIQVRQNDIDDVGERLKMSLVGKVLTTTAFNREAFKQTMLK 61

Query: 137 IWGIEGAVKMEKAGTNVYLCKFRRLKDKTRIIRAGPWTYDDAILIFEEPKGSSSAENWNF 196
           IW     V ++  G N++L  F    D+ R++R+GPW +D A+++ E P GS +      
Sbjct: 62  IWSTVREVVVKDIGENLFLFIFATEGDRLRVLRSGPWNFDKALVLLETPDGSIAPSKMLL 121

Query: 197 NY-----------------EICNCLGNSIGEFEEAESDENGKMKGETLRVKVKINVVEPL 256
            Y                  +   +GNS G   +     +GK  G  LR++V ++V +PL
Sbjct: 122 KYADFWIQVHNVPLSCMSTNLGRQIGNSFGRCLDVIEGMDGKCLGRFLRLRVSVDVSKPL 181

Query: 257 KRGTNVKIGSKAEKIWIPISYEKLPDFCYFCGRLGHVSQECG--EEGAKNAKEKPYGVEM 316
           +RG  + + S    +++   YE+LP+FC+ CGRLGHV +EC   ++ AK A EKPYG  +
Sbjct: 182 RRGKKMTLPS-GNTVFVEFRYERLPEFCFCCGRLGHVFKECSFVDQAAKQADEKPYGSWL 241

Query: 317 RETKGSKGIYKGWTPEQRTNTHFQRGRGEEYGEENRGRKPSAQNVNQREDEGNNDQ 352
           + TK    I  G    +RTN     G G E   E  G K     V  ++   + ++
Sbjct: 242 KATKDFHSIRAG--NPKRTN-----GSGSE--AEGDGAKEKEMEVEGQQSNSSGEK 287

[Close]

BLAST of Lag0001421.1 vs. ExPASy TrEMBL
Match: A0A5C7HA98 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_022651 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.3e-29
Identity = 81/255 (31.76%), Postives = 128/255 (50.20%), Query Frame = 0


Query: 113 IAVKILTTKLINPEFFSYIMPRIWGIEGAVKMEKAGTNVYLCKFRRLKDKTRIIRAGPWT 172
           +A KIL+  L+N + F  ++ RIW + G V++E    NVY   F+  +D+ ++  +GPW 
Sbjct: 5   LAGKILSPDLVNRDAFRSLISRIWKVRGGVEIEVVTNNVYAFHFQLSEDRRKVFTSGPWN 64

Query: 173 YDDAILIFEEPKGSSSAENWNFN-----------------YEICNCLGNSIGEFEEAESD 232
           +DD++++ EEP G+ S +   F+                  EI   LG  IGE  E +S 
Sbjct: 65  FDDSLIVLEEPTGTGSIKGLKFDRVDFWVQISNLPMLCMTKEIAEFLGGIIGEVREVDSG 124

Query: 233 ENGKMKGETLRVKVKINVVEPLKRGTNVKIGSKAEKIWIPISYEKLPDFCYFCGRLGHVS 292
             G   G+ +RV+V +++ +PL+R  +V +    E+  +PI YE+LP FC+ CG LGH  
Sbjct: 125 PTGDCLGKFVRVRVAVDITKPLRRFLHVDVLGDEEETVMPIQYERLPSFCFRCGLLGHTV 184

Query: 293 QECGE---EGAKNAKEKPYGVEMRETKGSKGI-YKGWTPE------QRTNTHFQRGRGEE 341
             C E       N+K+  YG  MR T   K +  + W P       +R N   + GRG  
Sbjct: 185 HGCPEGDCHSPINSKDFLYGAWMRATIPPKPVGNREWNPRYNSGNVRRPNYGLEGGRGRN 244

[Close]

BLAST of Lag0001421.1 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.3e-29
Identity = 88/290 (30.34%), Postives = 140/290 (48.28%), Query Frame = 0


Query: 107 EEYKSSIAVKILTTKLINPEFFSYIMPRIWGIEGAVKMEKAGTNVYLCKFRRLKDKTRII 166
           +  K  +  K+ T+K I+ E    +M  +W +  + + E  G N+Y+  F+ L +K+R++
Sbjct: 33  DNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVL 92

Query: 167 RAGPWTYDDAILIFEEPKGSSSAENWNFNY-----------------EICNCLGNSIGEF 226
            +GPWT++ ++L+   P  ++   + NFN+                 E+ N LG  +G+ 
Sbjct: 93  SSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLGDV 152

Query: 227 EEAESDENGKMKGETLRVKVKINVVEPLKRGTNVKIGSKAEKIWIPISYEKLPDFCYFCG 286
           EE E D      G  +RV+VKI+V +PL+RG  +K  S  + IW P+ YEKLPDFCY CG
Sbjct: 153 EEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLK-NSDGKDIWCPLRYEKLPDFCYECG 212

Query: 287 RLGHVSQECGEEGAKNAKEKP--YGVEMRETKGSKGIYKGWTPEQRTNTHFQR-GRGEEY 346
           ++GH  +EC +         P  YG  +R T   K +     PE+       R GRG + 
Sbjct: 213 KIGHSGRECEQRSKVVTTNSPEQYGDWLRATLLKKSVSH---PEEEVFWRGGRFGRGHQV 272

Query: 347 GEENRGRKP-SAQNVNQREDEGNNDQPNRTEYPGKKEPPAERSAMVEEVS 376
                GR     ++ N R+ +G      R    G    P E S    E++
Sbjct: 273 NGGRGGRGDWRRRDENWRDIDGPESSHRRAVEEGVDRVPNEESVTAAEIT 318

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BLAST of Lag0001421.1 vs. ExPASy TrEMBL
Match: A0A5C7GUN1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027725 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-28
Identity = 69/206 (33.50%), Postives = 110/206 (53.40%), Query Frame = 0


Query: 113 IAVKILTTKLINPEFFSYIMPRIWGIEGAVKMEKAGTNVYLCKFRRLKDKTRIIRAGPWT 172
           +A KIL+ + IN E F  ++ RIW ++G V++E   TN+Y   F+   D+ R+   GPW+
Sbjct: 29  LAGKILSRESINREAFRSLIARIWKVQGGVEIEVISTNIYAFPFQSFDDRKRVFMGGPWS 88

Query: 173 YDDAILIFEEPKGSSSAENWNFN-----------------YEICNCLGNSIGEFEEAESD 232
           +D A+++ EEP+G  +  +  FN                  +I   LG+ IGE  E +  
Sbjct: 89  FDGALIVLEEPEGKGAINSLLFNSVDFWVHITNVPMIYMTKDIGKFLGSIIGEVREVDVG 148

Query: 233 ENGKMKGETLRVKVKINVVEPLKRGTNVKIGSKAEKIWIPISYEKLPDFCYFCGRLGHVS 292
            +    G+ +RV+V + V +PL+R   V +    E+  +PI YE+LP FC+ CG +GH+ 
Sbjct: 149 PSSDCLGKFMRVRVAVEVDKPLRRFLRVDVLGDGEETVMPIQYERLPSFCFLCGLVGHLV 208

Query: 293 QEC---GEEGAKNAKEKPYGVEMRET 299
            EC   GE+G +      YG  +R T
Sbjct: 209 HECTSYGEDGLREGSGMVYGAWLRAT 234

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BLAST of Lag0001421.1 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-28
Identity = 71/222 (31.98%), Postives = 122/222 (54.95%), Query Frame = 0


Query: 75  DEEEVFRQLEKLKIDEERRIVEIEDDDIEELDEEYKS-SIAVKILTTKLINPEFFSYIMP 134
           + +++ R+ EKL +D++   +E     ++E  E+  S S+  K +T K+IN E F   + 
Sbjct: 2   ESDDISRKCEKLSLDDDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTIS 61

Query: 135 RIWGIEGAVKMEKAGTNVYLCKFRRLKDKTRIIRAGPWTYDDAILIFEEPKGSSSAENWN 194
            IW  +  V ME  G N++  +F+   D+ RI+  GPW +D  +L+  E  GS    +  
Sbjct: 62  TIWQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQ 121

Query: 195 FNY-----------------EICNCLGNSIGEFEEAESDENGKMKGETLRVKVKINVVEP 254
           F Y                 EI   LG  +G+ +E ++ E+G+  G+ +R++V I+V+ P
Sbjct: 122 FRYVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMNP 181

Query: 255 LKRGTNVKIGSKAEKIWIPISYEKLPDFCYFCGRLGHVSQEC 279
           LKRG  V +G   +   + I YE+LP+FCY+CG++GH+ ++C
Sbjct: 182 LKRGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDC 223

The following BLAST results are available for this feature:

BLAST of Lag0001421.1 vs. NCBI nr


Match Name	E-value	Identity	Description
VVA32948.1	1.8e-29	31.76	PREDICTED: DUF4283 domain-containing [Prunus dulcis]	[more]
TXG53482.1	6.7e-29	31.76	hypothetical protein EZV62_022651 [Acer yangbiense]	[more]
XP_022149484.1	6.7e-29	30.34	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
XP_015380691.1	2.0e-28	35.35	uncharacterized protein LOC107174364 [Citrus sinensis]	[more]
TXG48431.1	3.3e-28	33.50	hypothetical protein EZV62_027725 [Acer yangbiense]	[more]

BLAST of Lag0001421.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0001421.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5E4G034	8.6e-30	31.76	PREDICTED: DUF4283 domain-containing OS=Prunus dulcis OX=3755 GN=ALMOND_2B021569...	[more]
A0A5C7HA98	3.3e-29	31.76	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02265...	[more]
A0A6J1D765	3.3e-29	30.34	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5C7GUN1	1.6e-28	33.50	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027725 PE=4 SV=1	[more]
A0A5C7H9Y2	1.6e-28	31.98	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926...	[more]

BLAST of Lag0001421.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 80..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..530
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..369
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..507
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..70
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 195..400
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 101..181 e-value: 3.1E-9 score: 36.5
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 233..278 e-value: 1.4E-12 score: 47.1
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 195..400
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 265..278 score: 9.619753

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0001421	Lag0001421	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0001421.1.exon1	Lag0001421.1.exon1	exon
Lag0001421.1.exon2	Lag0001421.1.exon2	exon
Lag0001421.1.exon3	Lag0001421.1.exon3	exon
Lag0001421.1.exon4	Lag0001421.1.exon4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0001421.1	cds.Lag0001421.1	CDS
cds.Lag0001421.1	cds.Lag0001421.1_2	CDS
cds.Lag0001421.1	cds.Lag0001421.1_3	CDS
cds.Lag0001421.1	cds.Lag0001421.1_4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0001421.1	Lag0001421.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding