IVF0026896.2 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCGTCTTATTATGCACCCATGTTAGTACTCAGCTCTCTCTCATTGACTTGCTTTGTCGAATTTTGGATGGTTAAATAAGAAAATTGCAAAATTAAGGAGCTTCCTCACATCATATGGAAATGGCGGATTTCAATTTTCATTCCCATTAAGGTTAATTCGTTTCCATTCTTCACATTTTTGTTCGTTTTGTTCTTCTTCTTTGTGAAAGAAAGCTGTGCTATGCTCTAGGGTTCTTATCTTGATTCTTGGCTGTTAACGTTACTACTTTTGTTTTCATTGTCATTCATCCAATTTCATTTCGATTCTTGCATATTCAGTTATAGTTCCAACACTCAATTCTCTCGCGCTAATATGCTATCCTGATGTCAATGTACCACGAGCATTGTTCAACGTTTTGCTTCTCCTTTCGCGAGATGATGTTTTTAGTGGTTGCCCATTACAATGTTGATCGTCTTGGTCTTGGTTTAAGAAACAGTTAAATAACTCTTGTGTTTTTGAAATCTTGACTTTGATCAGGTTTTTGAGTTGGTTTTAATCAAACAGGAAATGCATGGTTGGTTAGATTAGTTTTGGTTACTCTGGAGTTCAGTCTCAAAACCTTGTTGGATTCTCTATTTCTCTTTGGACTTCAGTTTTAAGGGCTTTTGAAATTATTCGTTAGGTTTCATTTTACTTGATGATTGGACTTCCGTCTTGTAGTTGACTTTCTCCGTTTTCTTTGTGCTTCGGTTTTTAGGCGTTTTGAAATTATTCGTTAGGTTTTTTTTACTTGATTGGACCTTCGTCTTGTAGTTAACTTCCTTTTCGTGGCTTTACCATTTTGTATGTTTGTGTATTTTTTCTTCTCTCTTTTCTGAATGAAAATCAAATTTCTTAAACAAAAAAGAAACGATTGTGGATTCAGATTGTTTTGACCTCGAGTAGAGATGTGTAATTTATTGATTCTTGATGAACCCTTCGTGTATATATAAAGCATTTCTTGGTGACCCTTTGTATATGTATAGCATTTCTTGGTGAGCCCTTTGTTATCACTTGTTAGATAAATTTGAAGTTAGCTACTTAAAACTCCGAATCTGTTCTATCCATTTTCTAGATAGGTAACTTGAATGCATTTGTGTTCTCTTGTTTCTGTTTTGCAGAATCTATGCAATAGTACAAACTTGACATGGATGACAAACATTGTCACTGGAGCCAATGGCAACTGCTCGATTCTATCCTTCCAACTGGTGGCTTCGCTCATTCATTCGGCCTTGAGGCTGCAATACAAGCTCAAATCGTCTCAAGTCCAGAAGATCTCAAAACTTTTGTGATCCATTTATTGGACAACACTGGAAGTTTGTTTCTTCCCTTTGTTTATTCAGCCACACTATCACCTGATTTTGAAACCTGGAAGAAAAACGACAGGTTATTGGATGCAATATTAACTAATGAAGTTAGTCGAAAGGCATCTGTTACGCAAGGGTCAGCACTCATGAGAGTTTCAGCAATTGTGTTTTCCGAAATCTCATCTCTGAAAGCAATGAGGGAGCACTTGTACGGGACTGGGACTGTGTCGTTCCACCATGCTCCTATCTTCGGGCTAATCTGCGGTCTACTTGGATGGGATGGCACAATGTCACAAAGAGCATATCTCTTTATTACCTTGAGAGATGTTATTTCTGCTGCAACGAGATTGAATTTAGTAGGACCTTTGGGTGCAGCTGTGTTGCAACATCAGCTTGCACAAGTTGCTGAAAACGTATTGAAGAGATGGATGAACCGTCCTGTTGAAGAAGCTTGCCAAGCGGTTCCTTTGTTAGAGACGGTACAGGGATGCCATTCGTACCTGTTTTCTAGAATGTTTTGTTCTTGAAAAGTTTTTCAAGTGAAAACTGCATCTTTCTTTTGATTTTGGGTATTGGAGTCCCCTTCTTTCATGTTCTCTGCTTGAAAATGGTTGTGGATTATGAGATAATAGTGGCAATGTTGAAATTCTCTTACTCACATATATGCATTTCATTTTGTATGGCACTCCATGTTTTTGTTCCATCGAAGACTTTGTTTGTCTATGGCCATGATTCAATATCAAGTAAATGTAAATAGAGTTTTTAAGTACTTCGAAATCTTGATTATTCTGATCCTTTCAATTCTTATCGGTCCATGCAACATAAAATACTTTCTTTATGGATTTCTTTACTCTAAATACACAATTCTTTTCATTCATGTGGCACGTAGTTTCGTGGACAATTTTCTCATGCCAAAATATTTCCTACCTTAAGCTTGTCATGAAGAAAAGATCAAACATTTGTCTAGCATCTTCTCGAGCACATGAAAAACAGTTTAACATCTTAACATTGGCTGATAGAAAATTTCTCCCACCTTAAGTAAGAGAAATCCAAATCTCTAACAAAAATATAAACCATACTTCGATCCATTTTAGCTTGAAATGTTTATAAATTTTAGAGTATTTGAATGGAGAGATGCTAGAACTTGAAAGAAGTTGATCTTGATAGAGAGATTTAAGAGAATGTACAGAAAAGAAAGAGTAAAATGAAAAAGAAAATTGGGGTTACTGTACTTCCTTGGGGAGTTTAC AATCGTCTTATTATGCACCCATGTTAGTACTCAGCTCTCTCTCATTGACTTGCTTTGTCGAATTTTGGATGGTTAAATAAGAAAATTGCAAAATTAAGGAGCTTCCTCACATCATATGGAAATGGCGGATTTCAATTTTCATTCCCATTAAGAATCTATGCAATAGTACAAACTTGACATGGATGACAAACATTGTCACTGGAGCCAATGGCAACTGCTCGATTCTATCCTTCCAACTGGTGGCTTCGCTCATTCATTCGGCCTTGAGGCTGCAATACAAGCTCAAATCGTCTCAAGTCCAGAAGATCTCAAAACTTTTGTGATCCATTTATTGGACAACACTGGAAGTTTGTTTCTTCCCTTTGTTTATTCAGCCACACTATCACCTGATTTTGAAACCTGGAAGAAAAACGACAGGTTATTGGATGCAATATTAACTAATGAAGTTAGTCGAAAGGCATCTGTTACGCAAGGGTCAGCACTCATGAGAGTTTCAGCAATTGTGTTTTCCGAAATCTCATCTCTGAAAGCAATGAGGGAGCACTTGTACGGGACTGGGACTGTGTCGTTCCACCATGCTCCTATCTTCGGGCTAATCTGCGGTCTACTTGGATGGGATGGCACAATGTCACAAAGAGCATATCTCTTTATTACCTTGAGAGATGTTATTTCTGCTGCAACGAGATTGAATTTAGTAGGACCTTTGGGTGCAGCTGTGTTGCAACATCAGCTTGCACAAGTTGCTGAAAACGTATTGAAGAGATGGATGAACCGTCCTGTTGAAGAAGCTTGCCAAGCGGTTCCTTTGTTAGAGACGGTACAGGGATGCCATTCGTACCTGTTTTCTAGAATGTTTTGTTCTTGAAAAGTTTTTCAAGTGAAAACTGCATCTTTCTTTTGATTTTGGGTATTGGAGTCCCCTTCTTTCATGTTCTCTGCTTGAAAATGGTTGTGGATTATGAGATAATAGTGGCAATGTTGAAATTCTCTTACTCACATATATGCATTTCATTTTGTATGGCACTCCATGTTTTTGTTCCATCGAAGACTTTGTTTGTCTATGGCCATGATTCAATATCAAGTAAATGTAAATAGAGTTTTTAAGTACTTCGAAATCTTGATTATTCTGATCCTTTCAATTCTTATCGGTCCATGCAACATAAAATACTTTCTTTATGGATTTCTTTACTCTAAATACACAATTCTTTTCATTCATGTGGCACGTAGTTTCGTGGACAATTTTCTCATGCCAAAATATTTCCTACCTTAAGCTTGTCATGAAGAAAAGATCAAACATTTGTCTAGCATCTTCTCGAGCACATGAAAAACAGTTTAACATCTTAACATTGGCTGATAGAAAATTTCTCCCACCTTAAGTAAGAGAAATCCAAATCTCTAACAAAAATATAAACCATACTTCGATCCATTTTAGCTTGAAATGTTTATAAATTTTAGAGTATTTGAATGGAGAGATGCTAGAACTTGAAAGAAGTTGATCTTGATAGAGAGATTTAAGAGAATGTACAGAAAAGAAAGAGTAAAATGAAAAAGAAAATTGGGGTTACTGTACTTCCTTGGGGAGTTTAC ATGGATGACAAACATTGTCACTGGAGCCAATGGCAACTGCTCGATTCTATCCTTCCAACTGGTGGCTTCGCTCATTCATTCGGCCTTGAGGCTGCAATACAAGCTCAAATCGTCTCAAGTCCAGAAGATCTCAAAACTTTTGTGATCCATTTATTGGACAACACTGGAAGTTTGTTTCTTCCCTTTGTTTATTCAGCCACACTATCACCTGATTTTGAAACCTGGAAGAAAAACGACAGGTTATTGGATGCAATATTAACTAATGAAGTTAGTCGAAAGGCATCTGTTACGCAAGGGTCAGCACTCATGAGAGTTTCAGCAATTGTGTTTTCCGAAATCTCATCTCTGAAAGCAATGAGGGAGCACTTGTACGGGACTGGGACTGTGTCGTTCCACCATGCTCCTATCTTCGGGCTAATCTGCGGTCTACTTGGATGGGATGGCACAATGTCACAAAGAGCATATCTCTTTATTACCTTGAGAGATGTTATTTCTGCTGCAACGAGATTGAATTTAGTAGGACCTTTGGGTGCAGCTGTGTTGCAACATCAGCTTGCACAAGTTGCTGAAAACGTATTGAAGAGATGGATGAACCGTCCTGTTGAAGAAGCTTGCCAAGCGGTTCCTTTGTTAGAGACGGTACAGGGATGCCATTCGTACCTGTTTTCTAGAATGTTTTGTTCTTGA MDDKHCHWSQWQLLDSILPTGGFAHSFGLEAAIQAQIVSSPEDLKTFVIHLLDNTGSLFLPFVYSATLSPDFETWKKNDRLLDAILTNEVSRKASVTQGSALMRVSAIVFSEISSLKAMREHLYGTGTVSFHHAPIFGLICGLLGWDGTMSQRAYLFITLRDVISAATRLNLVGPLGAAVLQHQLAQVAENVLKRWMNRPVEEACQAVPLLETVQGCHSYLFSRMFCS Homology
BLAST of IVF0026896.2 vs. ExPASy Swiss-Prot
Match: Q9XHZ3 (Urease accessory protein F OS=Arabidopsis thaliana OX=3702 GN=UREF PE=2 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 4.9e-88 Identity = 154/221 (69.68%), Postives = 185/221 (83.71%), Query Frame = 0
BLAST of IVF0026896.2 vs. ExPASy Swiss-Prot
Match: E0ZS46 (Urease accessory protein F OS=Oryza sativa subsp. indica OX=39946 GN=UREF PE=2 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 1.9e-84 Identity = 146/226 (64.60%), Postives = 194/226 (85.84%), Query Frame = 0
BLAST of IVF0026896.2 vs. ExPASy Swiss-Prot
Match: Q0E3L5 (Urease accessory protein F OS=Oryza sativa subsp. japonica OX=39947 GN=UREF PE=2 SV=2) HSP 1 Score: 313.5 bits (802), Expect = 1.9e-84 Identity = 146/226 (64.60%), Postives = 194/226 (85.84%), Query Frame = 0
BLAST of IVF0026896.2 vs. ExPASy Swiss-Prot
Match: B7K911 (Urease accessory protein UreF OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=ureF PE=3 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13 Identity = 62/221 (28.05%), Postives = 104/221 (47.06%), Query Frame = 0
BLAST of IVF0026896.2 vs. ExPASy Swiss-Prot
Match: Q117Z4 (Urease accessory protein UreF OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=ureF PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 9.7e-12 Identity = 57/221 (25.79%), Postives = 99/221 (44.80%), Query Frame = 0
BLAST of IVF0026896.2 vs. ExPASy TrEMBL
Match: A0A0A0LJ08 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033980 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 1.2e-118 Identity = 214/228 (93.86%), Postives = 221/228 (96.93%), Query Frame = 0
BLAST of IVF0026896.2 vs. ExPASy TrEMBL
Match: A0A5D3B9D0 (Lon protease-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001170 PE=3 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 4.0e-117 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of IVF0026896.2 vs. ExPASy TrEMBL
Match: A0A5A7TYF8 (Lon protease-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001330 PE=3 SV=1) HSP 1 Score: 427.6 bits (1098), Expect = 3.4e-116 Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0
BLAST of IVF0026896.2 vs. ExPASy TrEMBL
Match: A0A1S3BWP6 (urease accessory protein F OS=Cucumis melo OX=3656 GN=LOC103494267 PE=4 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 9.8e-116 Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0
BLAST of IVF0026896.2 vs. ExPASy TrEMBL
Match: A0A6J1G3M3 (urease accessory protein F OS=Cucurbita moschata OX=3662 GN=LOC111450480 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 6.6e-112 Identity = 204/228 (89.47%), Postives = 213/228 (93.42%), Query Frame = 0
BLAST of IVF0026896.2 vs. NCBI nr
Match: XP_004144755.1 (urease accessory protein F [Cucumis sativus] >KGN60994.1 hypothetical protein Csa_021347 [Cucumis sativus]) HSP 1 Score: 436 bits (1120), Expect = 1.04e-153 Identity = 214/228 (93.86%), Postives = 221/228 (96.93%), Query Frame = 0
BLAST of IVF0026896.2 vs. NCBI nr
Match: XP_008453620.1 (PREDICTED: urease accessory protein F [Cucumis melo]) HSP 1 Score: 426 bits (1096), Expect = 2.76e-150 Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0
BLAST of IVF0026896.2 vs. NCBI nr
Match: XP_022946416.1 (urease accessory protein F [Cucurbita moschata]) HSP 1 Score: 413 bits (1062), Expect = 9.27e-145 Identity = 204/228 (89.47%), Postives = 213/228 (93.42%), Query Frame = 0
BLAST of IVF0026896.2 vs. NCBI nr
Match: XP_023545319.1 (urease accessory protein F [Cucurbita pepo subsp. pepo]) HSP 1 Score: 413 bits (1061), Expect = 1.63e-144 Identity = 204/228 (89.47%), Postives = 213/228 (93.42%), Query Frame = 0
BLAST of IVF0026896.2 vs. NCBI nr
Match: XP_022999571.1 (urease accessory protein F [Cucurbita maxima] >XP_022999572.1 urease accessory protein F [Cucurbita maxima]) HSP 1 Score: 412 bits (1059), Expect = 2.66e-144 Identity = 203/228 (89.04%), Postives = 212/228 (92.98%), Query Frame = 0
BLAST of IVF0026896.2 vs. TAIR 10
Match: AT1G21840.1 (urease accessory protein F ) HSP 1 Score: 325.5 bits (833), Expect = 3.5e-89 Identity = 154/221 (69.68%), Postives = 185/221 (83.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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