IVF0024770.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0024770.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag/pol protein
Location	chr09: 12238640 .. 12240459 (-)
Sequence length	720
RNA-Seq Expression	IVF0024770.1
Synteny	IVF0024770.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCCTGACACGTTTTCCCAAGGTATAGGTCGGGAAGTGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAAGGATCCAAAAGATGGTCAATGCTTCCAACGAGTTGCAAACGCTCGTCCGTTGTCAAAAACCACTGGAAATGCACTTGCAGCCAAGGAAACGAGCTGAGCTTGAGGAATTCCAGTGTTCGTCCAAAGAAAATGAGAGCAAGAATTCCCCGAACTCAGTTTTCAAGTCCTGGGGTAAAAAGCGGTCCTCAATGGTTTCTTCCCCTTGCTTCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCGAGAATTTCAACCCACACTAGTGGTATGCTCCCTTACACGTTTTCAAAAGGTAAAGGTCAGAAAGCGATCTCGTTGGAGGGAGAACTGCGGCTCAACCCAAAACGGTCCAAAAGATGGCCAATGCTTCCAATGAGGGGCAAACGCTCGTCCGGTGTCAAAAACCACTGGAAATCCACTTGCAGTGAAGAAAACGGGCTGAGCTCGAGGACTTCCGGTGTTCGTCCCAAGAAAAAACGCGCGAGAATGCCCCAGACTCAATTTTCTCGTCCTGCGGTAAAAAGCGGTACCTCGACGGTTTCTTCTCTTTGCTTCGTATTAGTCATAAGTCTTTCGATTACTTCCCTTTGCTTCGTATTTTTCATAAGTCTTTCAATCTTTGAGGCTCGTACTCTGAGGACTTTAACCCACACTCCTGGAATGCTCCCTGACAAGTTTTCCCAAGGTATATAGGTCGGAAAGCGAGCTCGTTTGAGGGAGAACTATGTGCAACCCAAAACGATCCAAAAGATGGCCAATGCTTCCAATGAGTGGTAAACGCTTGTTCGGTTTCAGAAACCATTGGAAATACACTTGCAGCGAAGGAAACGATCTGAGGTTAAGGACTTCCAGTGTTCGTTGCAAGAAAACGCGAGTTGGAATGCCCTAGACTCAGTTTTCTCGTCCAAGGGTAAAAAGCGGTCCCCCGACAGTTTCTTCCATTTGCTTCGTATTGGTCATAAGTCTTTCGATCTTCAGGGCTTCTACTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACATTTTCTTAAGGTATAAGTCGAGAAGTGAGCTCGTTTGAGGGAGAACTGTGGTGCCACCCAAAATGATTCAAAAGATGGCTAATATTTCCAATGAGTGGAAAACGCTTGTCCGGTGTCAGAAACCACTGAAAATCCACTTGCTATGAAGGAAACGGGCTGAGCTCGAGGACTTCCGGTGTTTGTCCCAAGAAACCGCGAGCGAGAATGCCCTAGACTCAGTTTTCTCGTCCTAGGGTAAAAAGCGGTCCCCCGACGGTTTCTTCCCTTTCCTTCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATACTCCCACACACGCTTTCCCAAGGTATAAGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGATCCAAAAGATGGTCAATGATTCCAATGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGAAAATGCACTTGCAGCGAAAGAAATGTGTTGAGCTCGAGGACTTCCGTGGTTCGTCCCAAGAAAATGCGAGAGAGAATGCCCTTGACTCAGTTTTCTCATCCTGGGGTAAAAAGCGGTCCCCTGACGGTTTCTTTCCTTTGCTTCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATGCTCTCTGA

mRNA sequence

ATGCTCCCTGACACGTTTTCCCAAGGTATAGGTCGGGAAGTGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAAGGATCCAAAAGATGGTCAATGCTTCCAACGAGTTGCAAACGCTCGTCCGTTGTCAAAAACCACTGGAAATGCACTTGCAGCCAAGGAAACGAGCTGAGCTTGAGGAATTCCAGTGTTCGTCCAAAGAAAATGAGAGCAAGAATTCCCCGAACTCAGTTTTCAAGTCCTGGGGGTAAAAAGCGGTCCCCCGACGGTTTCTTCCCTTTCCTTCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATACTCCCACACACGCTTTCCCAAGGTATAAGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGATCCAAAAGATGGTCAATGATTCCAATGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGAAAATGCACTTGCAGCGAAAGAAATGTGTTGAGCTCGAGGACTTCCGTGGTTCGTCCCAAGAAAATGCGAGAGAGAATGCCCTTGACTCAGTTTTCTCATCCTGGGGTAAAAAGCGGTCCCCTGACGGTTTCTTTCCTTTGCTTCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATGCTCTCTGA

Coding sequence (CDS)

ATGCTCCCTGACACGTTTTCCCAAGGTATAGGTCGGGAAGTGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAAGGATCCAAAAGATGGTCAATGCTTCCAACGAGTTGCAAACGCTCGTCCGTTGTCAAAAACCACTGGAAATGCACTTGCAGCCAAGGAAACGAGCTGAGCTTGAGGAATTCCAGTGTTCGTCCAAAGAAAATGAGAGCAAGAATTCCCCGAACTCAGTTTTCAAGTCCTGGGGGTAAAAAGCGGTCCCCCGACGGTTTCTTCCCTTTCCTTCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATACTCCCACACACGCTTTCCCAAGGTATAAGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGATCCAAAAGATGGTCAATGATTCCAATGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGAAAATGCACTTGCAGCGAAAGAAATGTGTTGAGCTCGAGGACTTCCGTGGTTCGTCCCAAGAAAATGCGAGAGAGAATGCCCTTGACTCAGTTTTCTCATCCTGGGGTAAAAAGCGGTCCCCTGACGGTTTCTTTCCTTTGCTTCGTATTGGTCATAAGTCTTTCGATCTTCGGGGCTCGTACTCCGAGGACTTCAACCCACACTCCTGGCATGCTCTCTGA

Protein sequence

MLPDTFSQGIGREVSSLEGELWCDPKGSKRWSMLPTSCKRSSVVKNHWKCTCSQGNELSLRNSSVRPKKMRARIPRTQFSSPGGKKRSPDGFFPFLRIGHKSFDLRGSYSEDFNPHSWHTPTHAFPRYKSGSELVGGRTVVRPKTIQKMVNDSNEWRTLVRCQKPLKMHLQRKKCVELEDFRGSSQENARENALDSVFSSWGKKRSPDGFFPLLRIGHKSFDLRGSYSEDFNPHSWHAL

Homology

[Close]

BLAST of IVF0024770.1 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 4.1e-48
Identity = 137/301 (45.51%), Postives = 162/301 (53.82%), Query Frame = 0


Query: 1    MLPDTFSQGIGREVSSLEGELWCDPKGSKRWSMLPTSCKRSSVVKNHWKCTCSQGNELSL 60
            MLPD FS+GIG+E SSLEGELWC+PK SKRW+MLPTS +RSS ++NH KCT  +GN LS 
Sbjct: 1583 MLPDMFSRGIGQEASSLEGELWCNPKRSKRWTMLPTSVERSSGIRNHLKCTRCEGNGLSS 1642

Query: 61   RNSSVRPKKMRARIPRTQFSSPGGK---------------KRS-------------PDGF 120
            R  S  PKK RAR+PRTQFS  G K               KR+              DG 
Sbjct: 1643 RTLSAHPKKTRARMPRTQFSRAGAKSGPQTVSSLCSVLVGKRARWWGNCGATKNGLKDGQ 1702

Query: 121  FPFLRIGHKSFDLR-----------GSYSEDFNPHSWHTPTHAFPRYKSGSELVGGRTVV 180
              F R+G +S  +R           G  S  F+     T     PR +  S  +G ++  
Sbjct: 1703 C-FQRVGKRSSGVRNHWKYTCSEGNGLRSRTFSACPKKTRAR-MPRTQFSS--LGAKS-- 1762

Query: 181  RPKTIQK----MVNDSNEWRT----------------LVRCQKPLK----MHLQRKKCVE 239
             P T+      +V     WR                  V   +P+       L  KK  E
Sbjct: 1763 GPPTVSSLCSVLVRKRARWRANCGATQNGPKDGQCFQRVGNARPVSETTGNALAVKKRAE 1822

[Close]

BLAST of IVF0024770.1 vs. ExPASy TrEMBL
Match: A0A5D3CGX3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00560 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 8.9e-43
Identity = 120/250 (48.00%), Postives = 132/250 (52.80%), Query Frame = 0


Query: 1   MLPDTFSQGIGREVSSLEGELWCDPKGSKRWSMLPTSCKRSSVVKNHWKCTCSQGNELSL 60
           MLP TF +GI  +VSS EGEL                               S+GN L  
Sbjct: 201 MLPHTFYKGISLKVSSFEGEL-------------------------------SKGNGLHS 260

Query: 61  RNSSVRPKKMRARIPRTQFSSPGGKKRSPDGFFPFLRIGHKSFDLRGSYSEDFNPHSWHT 120
           R   VRPKKMRARIP TQFS PG K   P     +LR                       
Sbjct: 261 RTFDVRPKKMRARIPWTQFSHPGVKSSPPTISSLWLR----------------------- 320

Query: 121 PTHAFPRYKSGSELVGGRTVVRPKTIQKMVNDSNEWRTLVRCQKPLKMHLQRKKCVELED 180
                      S+LVG RT VR K +QK+ N S EWRTLVRCQKPLKMHLQ++K  ELED
Sbjct: 321 -----------SKLVGSRTKVRLKIVQKLGNASKEWRTLVRCQKPLKMHLQQRKWAELED 380

Query: 181 ---------------FRGSSQENARENALDSVFSSWGKKRSPDGFFPLLRIGHKSFDLRG 236
                          FR SS ENA ENALDSVFSS G+K+  D FFPLLRIGH+SFDLRG
Sbjct: 381 FWCSSQQRKRVELDVFRCSSLENASENALDSVFSSCGEKQFFDDFFPLLRIGHQSFDLRG 385

[Close]

BLAST of IVF0024770.1 vs. ExPASy TrEMBL
Match: A0A5D3DFP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00220 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 4.1e-40
Identity = 96/146 (65.75%), Postives = 100/146 (68.49%), Query Frame = 0


Query: 75  PRTQFSSPGGKKRSPDGFFPFLRIGHKSFDLRGSYSEDFNPHSWHTPTHAFPRYKSGSEL 134
           P + FSS   KKRSPDGFFP LR GH                            K GSEL
Sbjct: 120 PDSAFSS-WDKKRSPDGFFPLLRTGH----------------------------KLGSEL 179

Query: 135 VGGRTVVRPKTIQKMVNDSNEWRTLVRCQKPLKMHLQRKKCVELEDFRGSSQENARENAL 194
           VGGRTVVR KT+QKM N SNEWR LVRCQKPL+MHLQR+K VELEDFR SSQEN  ENA 
Sbjct: 180 VGGRTVVRHKTVQKMANASNEWRMLVRCQKPLEMHLQRRKRVELEDFRCSSQENVSENAP 236

Query: 195 DSVFSSWGKKRSPDGFFPLLRIGHKS 221
           DS FSSWGKKRSPDGFFPLLRIGHKS
Sbjct: 240 DSAFSSWGKKRSPDGFFPLLRIGHKS 236

[Close]

BLAST of IVF0024770.1 vs. ExPASy TrEMBL
Match: A0A5A7UVV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00020 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 3.5e-31
Identity = 69/90 (76.67%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 149 MVNDSNEWRTLVRCQKPLKMHLQRKKCVELEDFRGSSQENARENALDSVFSSWGKKRSPD 208
           M N SNEW+TLVRCQKPL+M+LQR+K  EL+DF  SSQENA +NA DS FSSWGKKRSP 
Sbjct: 1   MANASNEWQTLVRCQKPLEMYLQRRKQTELKDFWCSSQENASDNAPDSAFSSWGKKRSPY 60

Query: 209 GFFPLLRIGHKSFDLRGSYSEDFNPHSWHA 239
           GFF LLRIGHKSFDL+GSY EDFN HSWH+
Sbjct: 61  GFFHLLRIGHKSFDLQGSYYEDFNRHSWHS 90

[Close]

BLAST of IVF0024770.1 vs. ExPASy TrEMBL
Match: A0A5A7VGB1 (Mitochondrial intermembrane space import and assembly protein 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G001130 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.1e-28
Identity = 65/88 (73.86%), Postives = 70/88 (79.55%), Query Frame = 0


Query: 1   MLPDTFSQGIGREVSSLEGELWCDPKGSKRWSMLPTSCKRSSVVKNHWKCTCSQGNELSL 60
           MLPDTFS GIGRE SSLEGELWCDPK SKRW  LPTS +RSS V+NHWKCTCS+GN LS 
Sbjct: 179 MLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVRNHWKCTCSEGNGLSS 238

Query: 61  RNSSVRPKKMRARIPRTQFSSPGGKKRS 89
           R S  RPKK  A +PRTQFS PG  KR+
Sbjct: 239 RTSGARPKKTPAGMPRTQFSRPGVGKRA 266

[Close]

BLAST of IVF0024770.1 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 202 bits (514), Expect = 1.85e-55
Identity = 137/301 (45.51%), Postives = 162/301 (53.82%), Query Frame = 0


Query: 1    MLPDTFSQGIGREVSSLEGELWCDPKGSKRWSMLPTSCKRSSVVKNHWKCTCSQGNELSL 60
            MLPD FS+GIG+E SSLEGELWC+PK SKRW+MLPTS +RSS ++NH KCT  +GN LS 
Sbjct: 1583 MLPDMFSRGIGQEASSLEGELWCNPKRSKRWTMLPTSVERSSGIRNHLKCTRCEGNGLSS 1642

Query: 61   RNSSVRPKKMRARIPRTQFSSPGGK---------------KRS-------------PDGF 120
            R  S  PKK RAR+PRTQFS  G K               KR+              DG 
Sbjct: 1643 RTLSAHPKKTRARMPRTQFSRAGAKSGPQTVSSLCSVLVGKRARWWGNCGATKNGLKDGQ 1702

Query: 121  FPFLRIGHKSFDLR-----------GSYSEDFNPHSWHTPTHAFPRYKSGSELVGGRTVV 180
              F R+G +S  +R           G  S  F+     T     PR +  S  +G ++  
Sbjct: 1703 C-FQRVGKRSSGVRNHWKYTCSEGNGLRSRTFSACPKKTRAR-MPRTQFSS--LGAKS-- 1762

Query: 181  RPKTIQKM----VNDSNEWRT----------------LVRCQKPLKMH----LQRKKCVE 238
             P T+  +    V     WR                  V   +P+       L  KK  E
Sbjct: 1763 GPPTVSSLCSVLVRKRARWRANCGATQNGPKDGQCFQRVGNARPVSETTGNALAVKKRAE 1822

[Close]

BLAST of IVF0024770.1 vs. NCBI nr
Match: KAA0040927.1 (hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa] >TYK10610.1 hypothetical protein E5676_scaffold315G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 183 bits (465), Expect = 4.25e-52
Identity = 120/250 (48.00%), Postives = 132/250 (52.80%), Query Frame = 0


Query: 1   MLPDTFSQGIGREVSSLEGELWCDPKGSKRWSMLPTSCKRSSVVKNHWKCTCSQGNELSL 60
           MLP TF +GI  +VSS EGEL                               S+GN L  
Sbjct: 201 MLPHTFYKGISLKVSSFEGEL-------------------------------SKGNGLHS 260

Query: 61  RNSSVRPKKMRARIPRTQFSSPGGKKRSPDGFFPFLRIGHKSFDLRGSYSEDFNPHSWHT 120
           R   VRPKKMRARIP TQFS PG K   P     +LR                       
Sbjct: 261 RTFDVRPKKMRARIPWTQFSHPGVKSSPPTISSLWLR----------------------- 320

Query: 121 PTHAFPRYKSGSELVGGRTVVRPKTIQKMVNDSNEWRTLVRCQKPLKMHLQRKKCVELED 180
                      S+LVG RT VR K +QK+ N S EWRTLVRCQKPLKMHLQ++K  ELED
Sbjct: 321 -----------SKLVGSRTKVRLKIVQKLGNASKEWRTLVRCQKPLKMHLQQRKWAELED 380

Query: 181 F---------------RGSSQENARENALDSVFSSWGKKRSPDGFFPLLRIGHKSFDLRG 235
           F               R SS ENA ENALDSVFSS G+K+  D FFPLLRIGH+SFDLRG
Sbjct: 381 FWCSSQQRKRVELDVFRCSSLENASENALDSVFSSCGEKQFFDDFFPLLRIGHQSFDLRG 385

[Close]

BLAST of IVF0024770.1 vs. NCBI nr
Match: TYK22521.1 (uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 176 bits (445), Expect = 3.64e-47
Identity = 96/146 (65.75%), Postives = 100/146 (68.49%), Query Frame = 0


Query: 75  PRTQFSSPGGKKRSPDGFFPFLRIGHKSFDLRGSYSEDFNPHSWHTPTHAFPRYKSGSEL 134
           P + FSS   KKRSPDGFFP LR GHK                             GSEL
Sbjct: 120 PDSAFSS-WDKKRSPDGFFPLLRTGHKL----------------------------GSEL 179

Query: 135 VGGRTVVRPKTIQKMVNDSNEWRTLVRCQKPLKMHLQRKKCVELEDFRGSSQENARENAL 194
           VGGRTVVR KT+QKM N SNEWR LVRCQKPL+MHLQR+K VELEDFR SSQEN  ENA 
Sbjct: 180 VGGRTVVRHKTVQKMANASNEWRMLVRCQKPLEMHLQRRKRVELEDFRCSSQENVSENAP 236

Query: 195 DSVFSSWGKKRSPDGFFPLLRIGHKS 220
           DS FSSWGKKRSPDGFFPLLRIGHKS
Sbjct: 240 DSAFSSWGKKRSPDGFFPLLRIGHKS 236

[Close]

BLAST of IVF0024770.1 vs. NCBI nr
Match: KAA0057641.1 (hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 145 bits (367), Expect = 6.32e-36
Identity = 69/90 (76.67%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 149 MVNDSNEWRTLVRCQKPLKMHLQRKKCVELEDFRGSSQENARENALDSVFSSWGKKRSPD 208
           M N SNEW+TLVRCQKPL+M+LQR+K  EL+DF  SSQENA +NA DS FSSWGKKRSP 
Sbjct: 1   MANASNEWQTLVRCQKPLEMYLQRRKQTELKDFWCSSQENASDNAPDSAFSSWGKKRSPY 60

Query: 209 GFFPLLRIGHKSFDLRGSYSEDFNPHSWHA 238
           GFF LLRIGHKSFDL+GSY EDFN HSWH+
Sbjct: 61  GFFHLLRIGHKSFDLQGSYYEDFNRHSWHS 90

[Close]

BLAST of IVF0024770.1 vs. NCBI nr
Match: KAA0026022.1 (Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa])

HSP 1 Score: 134 bits (336), Expect = 1.33e-34
Identity = 63/85 (74.12%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 1  MLPDTFSQGIGREVSSLEGELWCDPKGSKRWSMLPTSCKRSSVVKNHWKCTCSQGNELSL 60
          MLPD FS GIGRE +SLEGELWCDPK SKRW MLPTS +RSS  +NHWKCTCS+GN LS 
Sbjct: 1  MLPDMFSGGIGREANSLEGELWCDPKRSKRWPMLPTSGERSSGFRNHWKCTCSEGNGLSS 60

Query: 61 RNSSVRPKKMRARIPRTQFSSPGGK 85
          R S  RPKK RA +PRTQFS PG K
Sbjct: 61 RTSGARPKKTRAGMPRTQFSRPGVK 85

The following BLAST results are available for this feature:

BLAST of IVF0024770.1 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0024770.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5J2	4.1e-48	45.51	Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak...	[more]
A0A5D3CGX3	8.9e-43	48.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DFP2	4.1e-40	65.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UVV0	3.5e-31	76.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VGB1	2.1e-28	73.86	Mitochondrial intermembrane space import and assembly protein 40 OS=Cucumis melo...	[more]

BLAST of IVF0024770.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062888.1	1.85e-55	45.51	non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw...	[more]
KAA0040927.1	4.25e-52	48.00	hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa] >TYK1061...	[more]
TYK22521.1	3.64e-47	65.75	uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]	[more]
KAA0057641.1	6.32e-36	76.67	hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]	[more]
KAA0026022.1	1.33e-34	74.12	Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuw...	[more]

BLAST of IVF0024770.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..88

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0024770	IVF0024770	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0024770.1-exon	IVF0024770.1-exon-chr09:12238640..12239110	exon
IVF0024770.1-exon	IVF0024770.1-exon-chr09:12240211..12240459	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0024770.1-cds	IVF0024770.1-cds-chr09:12238640..12239110	CDS
IVF0024770.1-cds	IVF0024770.1-cds-chr09:12240211..12240459	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0024770.1	IVF0024770.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005488	binding
molecular_function	GO:0008234	cysteine-type peptidase activity