IVF0019351.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0019351.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ribosomal protein L2
Location	tig00007088: 197207 .. 198765 (+)
Sequence length	1155
RNA-Seq Expression	IVF0019351.2
Synteny	IVF0019351.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACGATCTCGACAAAGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTTGAGTACAGGGAAGTCCGCTGGTAGGAATTCCTCAGGGCGTATTACGGTTTTTCGCCTCGGGGGTGGATCGAAGCGATTGCAGCGAAGAATTGATCTGAAACGAAGCACTTCGTCTATGGGCATTGTGGAAAGAATCGAATATGACCCTAATCGTTCTTCTCGGATCCATCCAGTACGATGGATCGAGGGGGTCCGCCAGAGGAAATGCAAGACTCAAGAGGAGTTCGCTCCTCAGCCTCAGATCCTCGAACCTACCACGACCACCATCCGCGGCCTATTTTCGTTCTCTTCCCCGCCCGGGAAGGTGGATCAAAGAAAGGTAGCTTCCTTCTCTCCTGGACGGATGGCGGCTTATGTAGTGGTCGGCCTTCCTACCACCAGGATGCCTCCTTGGTCGAAGAGCCCCGATACTAGTACTAGGAAGGGCGCAGGAAGCAAAAAAACTTGCGCGAAGGACCTTTTCTTCTCCGCCTTCTCCTCTCAAAAGACCAAGGGAGAGACAGCATCCCTTTCCTTCGGTAGCTCTTTTGCTTTCCCAAGGGTAGCGGTAGCTGGGGCAAAGCCCGCTTTCTTCGCTCCGCGAATGAGAGAGAAAGTCAGAGGAAAAAAGACGTTCTCTCTTTGCGAGGTCCGAAAGTGGAGAACGCATAGCATTCTCTGGGCACATAGGATGAAAGGTAAAGCTGCCCTTTCTTGGCGGAGTTTTAGGCGGCAAGAGACTTTAGGGCTTGTTGGAGGTGCTGAGCATAAGGAATCGAAAGCAGAGAGGGATCAAGGTAGCTTACCTGCCAAGCCGATAGGCGAAGGGCCGAAGGATGGAGCGTGCAAAGTCAATCGTGTACCTGTCGTGTGACCCGTTGGTCCTAAGCAATGTCTTGCGCGAAGGGACCCACCTAGAAAAGCTCGCCTTTATGTTAGGGGGGGCACTAAAATGGAACTTCGATCGGATGCGGGTATCCAATCCCGCCGCTGAGATGTCAAGCGGATTCCTGGGCGTTGACGAATGGCCGGCCACCTTTGACGTTAGAAGAGCAAAAGGCCCGGGGCATAGCTGGATGAACCAATGTGAATGAGTGTCAGCTTCGTGACCCGAAGACGATTGGTGCTGACCACACTAGGTGCTACCGTGGTAGCAAGAGAGGCCAGGCGGTGACAATTGAGAGGTTCTCACTGAGCATTCCTAGTCACACGGGAAGAGAGGTCAAATGGCAAGGCCATACGCCCGTTTGGCTCCTCGCGGAGTATAGCTCACATCCAAACAAAGATCTGATTGGGGAACGGGGCAAGGCCCATGAAGCTCCGGCAGAAAGGGAAGGCCTGCCAGGCCGTATGCCCATGGGTGCAGGATTCTTCGAAAAAGCGCGGGCTGACTCGGAGACCTGGGACCTTGGCTTAGGAAGGAATGAAGGGGAGCTCTTCTCGCTTTCTCCGCCAGTGGCTTATGTAGTGGGAAGGCCGACGACTACACAGACTCTATACCAAGTCATGGAGCGATAG

mRNA sequence

ATGATTACGATCTCGACAAAGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTTGAGTACAGGGAAGTCCGCTGGTAGGAATTCCTCAGGGCGTATTACGGTTTTTCGCCTCGGGGGTGGATCGAAGCGATTGCAGCGAAGAATTGATCTGAAACGAAGCACTTCGTCTATGGGCATTGTGGAAAGAATCGAATATGACCCTAATCGTTCTTCTCGGATCCATCCAGTACGATGGATCGAGGGGGTCCGCCAGAGGAAATGCAAGACTCAAGAGGAGTTCGCTCCTCAGCCTCAGATCCTCGAACCTACCACGACCACCATCCGCGGCCTATTTTCGTTCTCTTCCCCGCCCGGGAAGGTGGATCAAAGAAAGGTAGCTTCCTTCTCTCCTGGACGGATGGCGGCTTATGTAGTGGTCGGCCTTCCTACCACCAGGATGCCTCCTTGGTCGAAGAGCCCCGATACTAGTACTAGGAAGGGCGCAGGAAGCAAAAAAACTTGCGCGAAGGACCTTTTCTTCTCCGCCTTCTCCTCTCAAAAGACCAAGGGAGAGACAGCATCCCTTTCCTTCGGTAGCTCTTTTGCTTTCCCAAGGGTAGCGGTAGCTGGGGCAAAGCCCGCTTTCTTCGCTCCGCGAATGAGAGAGAAAGTCAGAGGAAAAAAGACGTTCTCTCTTTGCGAGGTCCGAAAGTGGAGAACGCATAGCATTCTCTGGGCACATAGGATGAAAGGTAAAGCTGCCCTTTCTTGGCGGAGTTTTAGGCGGCAAGAGACTTTAGGGCTTGTTGGAGGTGCTGAGCATAAGGAATCGAAAGCAGAGAGGGATCAAGGTAGCTTACCTGCCAAGCCGATAGGCGAAGGGCCGAAGGATGGAGCGTGCAAAGTCAATCTCACACGGGAAGAGAGGTCAAATGGCAAGGCCATACGCCCGTTTGGCTCCTCGCGGACTCCGGCAGAAAGGGAAGGCCTGCCAGGCCGTATGCCCATGGGTGCAGGATTCTTCGAAAAAGCGCGGGCTGACTCGGAGACCTGGGACCTTGGCTTAGGAAGGAATGAAGGGGAGCTCTTCTCGCTTTCTCCGCCAGTGGCTTATGTAGTGGGAAGGCCGACGACTACACAGACTCTATACCAAGTCATGGAGCGATAG

Coding sequence (CDS)

ATGATTACGATCTCGACAAAGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTTGAGTACAGGGAAGTCCGCTGGTAGGAATTCCTCAGGGCGTATTACGGTTTTTCGCCTCGGGGGTGGATCGAAGCGATTGCAGCGAAGAATTGATCTGAAACGAAGCACTTCGTCTATGGGCATTGTGGAAAGAATCGAATATGACCCTAATCGTTCTTCTCGGATCCATCCAGTACGATGGATCGAGGGGGTCCGCCAGAGGAAATGCAAGACTCAAGAGGAGTTCGCTCCTCAGCCTCAGATCCTCGAACCTACCACGACCACCATCCGCGGCCTATTTTCGTTCTCTTCCCCGCCCGGGAAGGTGGATCAAAGAAAGGTAGCTTCCTTCTCTCCTGGACGGATGGCGGCTTATGTAGTGGTCGGCCTTCCTACCACCAGGATGCCTCCTTGGTCGAAGAGCCCCGATACTAGTACTAGGAAGGGCGCAGGAAGCAAAAAAACTTGCGCGAAGGACCTTTTCTTCTCCGCCTTCTCCTCTCAAAAGACCAAGGGAGAGACAGCATCCCTTTCCTTCGGTAGCTCTTTTGCTTTCCCAAGGGTAGCGGTAGCTGGGGCAAAGCCCGCTTTCTTCGCTCCGCGAATGAGAGAGAAAGTCAGAGGAAAAAAGACGTTCTCTCTTTGCGAGGTCCGAAAGTGGAGAACGCATAGCATTCTCTGGGCACATAGGATGAAAGGTAAAGCTGCCCTTTCTTGGCGGAGTTTTAGGCGGCAAGAGACTTTAGGGCTTGTTGGAGGTGCTGAGCATAAGGAATCGAAAGCAGAGAGGGATCAAGGTAGCTTACCTGCCAAGCCGATAGGCGAAGGGCCGAAGGATGGAGCGTGCAAAGTCAATCTCACACGGGAAGAGAGGTCAAATGGCAAGGCCATACGCCCGTTTGGCTCCTCGCGGACTCCGGCAGAAAGGGAAGGCCTGCCAGGCCGTATGCCCATGGGTGCAGGATTCTTCGAAAAAGCGCGGGCTGACTCGGAGACCTGGGACCTTGGCTTAGGAAGGAATGAAGGGGAGCTCTTCTCGCTTTCTCCGCCAGTGGCTTATGTAGTGGGAAGGCCGACGACTACACAGACTCTATACCAAGTCATGGAGCGATAG

Protein sequence

MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPPGKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSILWAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVNLTREERSNGKAIRPFGSSRTPAEREGLPGRMPMGAGFFEKARADSETWDLGLGRNEGELFSLSPPVAYVVGRPTTTQTLYQVMER

Homology

[Close]

BLAST of IVF0019351.2 vs. ExPASy Swiss-Prot
Match: P93311 (60S ribosomal protein L2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL2 PE=1 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 7.4e-113
Identity = 223/297 (75.08%), Postives = 241/297 (81.14%), Query Frame = 0


Query: 14  RALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRS 73
           RALRQFTLSTGKSAGRNSSGRITVF  GGGSKRL RRIDLKRSTSSMGIVE IEYDPNRS
Sbjct: 7   RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIEYDPNRS 66

Query: 74  SRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPPGKVDQRKVASFSP 133
           S+I PVRWI+G  Q+K  T E+FAP  +ILEPTT TI GLFSFS  PGKVD+RKVA FSP
Sbjct: 67  SQIAPVRWIKGGCQKKMNTIEKFAPPRKILEPTTNTISGLFSFSFLPGKVDKRKVACFSP 126

Query: 134 GRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSQKTKGETASLSF 193
           G MAAYVVVGLP T MPP S S      KGAGS KT  KD+FFSAFSS K K ETASL+F
Sbjct: 127 GLMAAYVVVGLP-TGMPPLSSSKSAFASKGAGSTKTLVKDVFFSAFSSPKAKRETASLAF 186

Query: 194 GSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSILWAHRMKGKAALSW 253
            SSF FPR+AVAGAKPAFFAPRMR+KVRGK TFSLCEV+K RTHSILWAHR+KGKA LSW
Sbjct: 187 ASSFGFPRIAVAGAKPAFFAPRMRQKVRGKSTFSLCEVQKGRTHSILWAHRIKGKAGLSW 246

Query: 254 RSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGE-----------GPKDGACKVN 300
           +SFRRQ+TLGLVG A HK+SK + DQG+LPAKPIGE             KDGACKV+
Sbjct: 247 QSFRRQDTLGLVGAAGHKKSKPKTDQGNLPAKPIGERAKQLKALRGLRAKDGACKVD 302

[Close]

BLAST of IVF0019351.2 vs. ExPASy Swiss-Prot
Match: P0C8K6 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa OX=4530 GN=RPL2 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 8.5e-77
Identity = 185/335 (55.22%), Postives = 199/335 (59.40%), Query Frame = 0


Query: 8   RQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSMGIVERIE 67
           RQS +GRALR FTLSTGKSAGRNSSGRITVF  GGGSKRLQR+IDLKRSTSS+GIVERIE
Sbjct: 2   RQSIKGRALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKIDLKRSTSSIGIVERIE 61

Query: 68  YDPNRSSRIHPVRWIEGV---RQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPPGKVD 127
           YDPNRSSRI  VRWIEGV   RQRK KT EEFA   +ILE TT TI  LFSFSS      
Sbjct: 62  YDPNRSSRIALVRWIEGVLPGRQRKFKTIEEFALPRKILESTTATIFCLFSFSS------ 121

Query: 128 QRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSQKT 187
                                                                  SS   
Sbjct: 122 ------------------------------------------------------LSSPLA 181

Query: 188 KGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSILWAHR 247
           +GETASLSFGSS  FPR+AVAGAKPAFFA RMREK  GKKTFSLCE+RKWRTH +LWAHR
Sbjct: 182 QGETASLSFGSSLGFPRIAVAGAKPAFFAERMREKKIGKKTFSLCEIRKWRTHCVLWAHR 241

Query: 248 MKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQ------------------------- 300
           +K KAALSW+S R+Q+TL LVG AEH ESK + DQ                         
Sbjct: 242 IKRKAALSWQSLRQQKTLELVGAAEHNESKLKADQGSLLPRQVLAYALCSGRPSYLHASR 276

[Close]

BLAST of IVF0019351.2 vs. ExPASy Swiss-Prot
Match: Q2F969 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 288.9 bits (738), Expect = 8.5e-77
Identity = 185/335 (55.22%), Postives = 199/335 (59.40%), Query Frame = 0


Query: 8   RQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSMGIVERIE 67
           RQS +GRALR FTLSTGKSAGRNSSGRITVF  GGGSKRLQR+IDLKRSTSS+GIVERIE
Sbjct: 2   RQSIKGRALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKIDLKRSTSSIGIVERIE 61

Query: 68  YDPNRSSRIHPVRWIEGV---RQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPPGKVD 127
           YDPNRSSRI  VRWIEGV   RQRK KT EEFA   +ILE TT TI  LFSFSS      
Sbjct: 62  YDPNRSSRIALVRWIEGVLPGRQRKFKTIEEFALPRKILESTTATIFCLFSFSS------ 121

Query: 128 QRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSQKT 187
                                                                  SS   
Sbjct: 122 ------------------------------------------------------LSSPLA 181

Query: 188 KGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSILWAHR 247
           +GETASLSFGSS  FPR+AVAGAKPAFFA RMREK  GKKTFSLCE+RKWRTH +LWAHR
Sbjct: 182 QGETASLSFGSSLGFPRIAVAGAKPAFFAERMREKKIGKKTFSLCEIRKWRTHCVLWAHR 241

Query: 248 MKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQ------------------------- 300
           +K KAALSW+S R+Q+TL LVG AEH ESK + DQ                         
Sbjct: 242 IKRKAALSWQSLRQQKTLELVGAAEHNESKLKADQGSLLPRQVLAYALCSGRPSYLHASR 276

[Close]

BLAST of IVF0019351.2 vs. ExPASy Swiss-Prot
Match: P92812 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RPL2 PE=2 SV=2)

HSP 1 Score: 288.9 bits (738), Expect = 8.5e-77
Identity = 185/335 (55.22%), Postives = 199/335 (59.40%), Query Frame = 0


Query: 8   RQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSMGIVERIE 67
           RQS +GRALR FTLSTGKSAGRNSSGRITVF  GGGSKRLQR+IDLKRSTSS+GIVERIE
Sbjct: 2   RQSIKGRALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKIDLKRSTSSIGIVERIE 61

Query: 68  YDPNRSSRIHPVRWIEGV---RQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPPGKVD 127
           YDPNRSSRI  VRWIEGV   RQRK KT EEFA   +ILE TT TI  LFSFSS      
Sbjct: 62  YDPNRSSRIALVRWIEGVLPGRQRKFKTIEEFALPRKILESTTATIFCLFSFSS------ 121

Query: 128 QRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSQKT 187
                                                                  SS   
Sbjct: 122 ------------------------------------------------------LSSPLA 181

Query: 188 KGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSILWAHR 247
           +GETASLSFGSS  FPR+AVAGAKPAFFA RMREK  GKKTFSLCE+RKWRTH +LWAHR
Sbjct: 182 QGETASLSFGSSLGFPRIAVAGAKPAFFAERMREKKIGKKTFSLCEIRKWRTHCVLWAHR 241

Query: 248 MKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQ------------------------- 300
           +K KAALSW+S R+Q+TL LVG AEH ESK + DQ                         
Sbjct: 242 IKRKAALSWQSLRQQKTLELVGAAEHNESKLKADQGSLLPRQVLAYALCSGRPSYLHASR 276

[Close]

BLAST of IVF0019351.2 vs. ExPASy Swiss-Prot
Match: P26859 (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 5.6e-28
Identity = 107/255 (41.96%), Postives = 131/255 (51.37%), Query Frame = 0


Query: 12  EGRALRQFTLSTGK-SAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSMGIVERIEYDP 71
           +G+AL+Q T    + SAGRNSSGRITVF  GGGSKRLQR+ID KRSTSSMGIVERIEYDP
Sbjct: 7   KGKALKQLTFHLKRNSAGRNSSGRITVFHRGGGSKRLQRKIDFKRSTSSMGIVERIEYDP 66

Query: 72  NRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPPGKVDQRKVAS 131
           NRSS I  VRWIEGV +   +    F+      E        LFSFSS P +  + K   
Sbjct: 67  NRSSWIALVRWIEGVLRPGKRL--AFSKANSRREKNMFFFGLLFSFSSLPRQAQRIKYEK 126

Query: 132 FSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSQKTKGETAS 191
                          T  + P  +  ++S   G        +DL          + +  S
Sbjct: 127 ---------------TRALRPCEQILESSWVLG-------TRDL----------RAKEVS 186

Query: 192 LS-FGSSFAFPRVAVAGAKPAFFAPRMR-----------EKVRGKKTFSLCEVRKWRTHS 251
           L   GS    P +AVAGAKPAFFA RM+             +RG+ TFS  E ++W+T S
Sbjct: 187 LGPLGSFLGLPSIAVAGAKPAFFAFRMKGPSSLTGRERLSPLRGENTFSQSEGQRWKTQS 224

Query: 252 ILWAHRMKGKAALSW 254
              A R K    LSW
Sbjct: 247 --GAPRRK-SLVLSW 224

[Close]

BLAST of IVF0019351.2 vs. ExPASy TrEMBL
Match: G3EU27 (Ribosomal protein L2 OS=Cucumis melo subsp. melo OX=412675 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 1.2e-163
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM 60
           MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM
Sbjct: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM 60

Query: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP 120
           GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP
Sbjct: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP 120

Query: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS 180
           GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS
Sbjct: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS 180

Query: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240
           SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL
Sbjct: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240

Query: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN 300
           WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN
Sbjct: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN 299

[Close]

BLAST of IVF0019351.2 vs. ExPASy TrEMBL
Match: A0A3S9JIH9 (Ribosomal protein L2 OS=Cucumis melo var. momordica OX=2034244 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 1.2e-163
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM 60
           MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM
Sbjct: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM 60

Query: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP 120
           GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP
Sbjct: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP 120

Query: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS 180
           GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS
Sbjct: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS 180

Query: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240
           SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL
Sbjct: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240

Query: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN 300
           WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN
Sbjct: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN 299

[Close]

BLAST of IVF0019351.2 vs. ExPASy TrEMBL
Match: G3EIZ1 (Ribosomal protein L2 OS=Cucumis sativus OX=3659 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 3.1e-162
Identity = 296/299 (99.00%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM 60
           MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVF LGGGSKRLQRRIDLKRSTSSM
Sbjct: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHLGGGSKRLQRRIDLKRSTSSM 60

Query: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP 120
           GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAP+PQILEPTTTTIRGLFSFSSPP
Sbjct: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPKPQILEPTTTTIRGLFSFSSPP 120

Query: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS 180
           GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWS+SPDTSTRKGAGSKKTCAKDLFFSAFS
Sbjct: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSRSPDTSTRKGAGSKKTCAKDLFFSAFS 180

Query: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240
           SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL
Sbjct: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240

Query: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN 300
           WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN
Sbjct: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN 299

[Close]

BLAST of IVF0019351.2 vs. ExPASy TrEMBL
Match: A0A200Q8E8 (Ribosomal protein L2 OS=Macleaya cordata OX=56857 GN=BVC80_6573g1 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.8e-147
Identity = 297/399 (74.44%), Postives = 310/399 (77.69%), Query Frame = 0


Query: 8   RQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSMGIVERIE 67
           RQS +GRALRQFTLSTGKSA RNSSGRITVF  GGGSKRLQRRIDLKRSTSSM IVERIE
Sbjct: 2   RQSLQGRALRQFTLSTGKSAERNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMVIVERIE 61

Query: 68  YDPNRSSRIHPVRWIEGV---RQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPPGKVD 127
           YDPN SSRI  VRWIEGV   RQRKC T EEFAP  +ILEPTT TIR LFSFSS PGKVD
Sbjct: 62  YDPNCSSRIALVRWIEGVQLHRQRKCNTIEEFAPLCKILEPTTATIRSLFSFSSLPGKVD 121

Query: 128 QRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSQKT 187
           QRKVA FSPG MAAYVVVGLP TRMPPWSKS     +  AGSKKTCAKD+FFSA SS K 
Sbjct: 122 QRKVACFSPGLMAAYVVVGLP-TRMPPWSKS-----QASAGSKKTCAKDVFFSALSSPKA 181

Query: 188 KGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSILWAHR 247
           KGETASLSFGSSF FPR+AVAGAKPAFFAPRMREK+RGK TFSLCEVRKWRTHSILWAHR
Sbjct: 182 KGETASLSFGSSFCFPRIAVAGAKPAFFAPRMREKLRGKNTFSLCEVRKWRTHSILWAHR 241

Query: 248 MKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKV------ 307
           +K KAALSW+SFRRQETLGLVG AEH ESK + DQGSLPAKPIGEGPKDGACKV      
Sbjct: 242 IKRKAALSWQSFRRQETLGLVGAAEHNESKPKTDQGSLPAKPIGEGPKDGACKVDRAPVV 301

Query: 308 -----NLTREERSNGKAIRPFG-----------------------SSRTPAEREGLPGRM 367
                N  R   SN  A    G                        +++PAEREGLPGRM
Sbjct: 302 GALKWNFDRMRVSNPAAEMSSGFLGLDEWPATFYVRRAKGPGHSRMNQSPAEREGLPGRM 361

Query: 368 PMGAGFFEKARADSETWDLGLGRNEGELFSLSPPVAYVV 370
           PMGAGFFEKARADSETWDLGL  NEG+L  LSPP AYVV
Sbjct: 362 PMGAGFFEKARADSETWDLGLATNEGKLEELSPPAAYVV 394

[Close]

BLAST of IVF0019351.2 vs. ExPASy TrEMBL
Match: A0A7D5XZ32 (Ribosomal protein L2 OS=Luffa acutangula OX=56866 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 4.2e-143
Identity = 269/292 (92.12%), Postives = 273/292 (93.49%), Query Frame = 0


Query: 8   RQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSMGIVERIE 67
           RQSQEGRALRQFTLSTGKSAGRNSSGRITVF  GGGSKRLQR ID KRSTSSMGIVERIE
Sbjct: 2   RQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRIIDKKRSTSSMGIVERIE 61

Query: 68  YDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPPGKVDQRK 127
           YDPNRSSRI PVRWIEGVRQRKCKT EEFAP  +ILEPTTTTIRGLFSFSSPPGKVDQRK
Sbjct: 62  YDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQRK 121

Query: 128 VASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSQKTKGE 187
           VA FSPG MAAYVVVGLP TRMPPWSKSP TST KGAGSKKTCAKD+FFSAFSSQKTKGE
Sbjct: 122 VACFSPGLMAAYVVVGLP-TRMPPWSKSPFTSTSKGAGSKKTCAKDVFFSAFSSQKTKGE 181

Query: 188 TASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSILWAHRMKG 247
           TASLSFGSSF FPR+AVAGAKPAFFAPRMREK+RGK TFSLCEVRKWRTHSILWAHRMK 
Sbjct: 182 TASLSFGSSFGFPRIAVAGAKPAFFAPRMREKLRGKNTFSLCEVRKWRTHSILWAHRMKR 241

Query: 248 KAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN 300
           KAALSWRSFRRQETLGLVGGAEH ESK E DQGSLPAKPIGEGPKDGACKVN
Sbjct: 242 KAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVN 292

[Close]

BLAST of IVF0019351.2 vs. NCBI nr
Match: XP_023521202.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111784913 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 601 bits (1550), Expect = 6.74e-214
Identity = 325/389 (83.55%), Postives = 333/389 (85.60%), Query Frame = 0


Query: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM 60
           MI IST RQSQEGRALRQFTLSTGKSAGRNSSGRITVF  GGGSKRLQRRIDLKRSTSSM
Sbjct: 1   MIMISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSM 60

Query: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP 120
           GIVERIEYDPNRSSRI PVRWIEGVRQRKCKT EEFAP  +ILEPTTTTI GLFSFSS P
Sbjct: 61  GIVERIEYDPNRSSRIAPVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIHGLFSFSSTP 120

Query: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS 180
           GKVDQRKVA FSPG++AAYVVVGLPT R+PP SKSP TS  KGAGSKKTCAKD+FFSAFS
Sbjct: 121 GKVDQRKVACFSPGQIAAYVVVGLPT-RIPPCSKSPFTS--KGAGSKKTCAKDVFFSAFS 180

Query: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240
           SQKTKGETASLSFGS   FPR+ VAGA PAFFAPRMREKVRG  TFSLCEV KWRTHSIL
Sbjct: 181 SQKTKGETASLSFGSPLGFPRIVVAGAMPAFFAPRMREKVRGINTFSLCEVXKWRTHSIL 240

Query: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVNL 300
           WAHRMK KAAL W+SFRRQET GLVGGAEH ESK E D  SLPAKPIGEGPKDGACKVNL
Sbjct: 241 WAHRMKRKAALDWQSFRRQETDGLVGGAEHNESKPETDPASLPAKPIGEGPKDGACKVNL 300

Query: 301 TREERSNGK-AIRPFGSSRT-------------------PAEREGLPGRMPMGAGFFEKA 360
           TREERSNGK AIRPFGSSR+                   PAEREGLPGRMPMGAGFFEKA
Sbjct: 301 TREERSNGKKAIRPFGSSRSIAHIQTXYLIGERGNAHEAPAEREGLPGRMPMGAGFFEKA 360

Query: 361 RADSETWDLGLGRNEGELFSLSPPVAYVV 369
           RADSETWDLGL  NEGEL  LSPPVAYVV
Sbjct: 361 RADSETWDLGLATNEGELKELSPPVAYVV 386

[Close]

BLAST of IVF0019351.2 vs. NCBI nr
Match: AEN56111.1 (ribosomal protein L2 [Cucumis melo subsp. melo])

HSP 1 Score: 586 bits (1510), Expect = 1.98e-208
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM 60
           MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM
Sbjct: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM 60

Query: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP 120
           GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP
Sbjct: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP 120

Query: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS 180
           GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS
Sbjct: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS 180

Query: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240
           SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL
Sbjct: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240

Query: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN 299
           WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN
Sbjct: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN 299

[Close]

BLAST of IVF0019351.2 vs. NCBI nr
Match: AZP40312.1 (ribosomal protein L2 [Cucumis melo var. momordica])

HSP 1 Score: 586 bits (1510), Expect = 2.13e-208
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM 60
           MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM
Sbjct: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM 60

Query: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP 120
           GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP
Sbjct: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP 120

Query: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS 180
           GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS
Sbjct: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS 180

Query: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240
           SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL
Sbjct: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240

Query: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN 299
           WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN
Sbjct: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN 299

[Close]

BLAST of IVF0019351.2 vs. NCBI nr
Match: YP_004849339.1 (ribosomal protein L2 [Cucumis sativus] >ADZ10766.1 ribosomal protein L2 [Cucumis sativus])

HSP 1 Score: 581 bits (1498), Expect = 8.23e-207
Identity = 296/299 (99.00%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM 60
           MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVF LGGGSKRLQRRIDLKRSTSSM
Sbjct: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHLGGGSKRLQRRIDLKRSTSSM 60

Query: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPP 120
           GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAP+PQILEPTTTTIRGLFSFSSPP
Sbjct: 61  GIVERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPKPQILEPTTTTIRGLFSFSSPP 120

Query: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFS 180
           GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWS+SPDTSTRKGAGSKKTCAKDLFFSAFS
Sbjct: 121 GKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSRSPDTSTRKGAGSKKTCAKDLFFSAFS 180

Query: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240
           SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL
Sbjct: 181 SQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSIL 240

Query: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN 299
           WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN
Sbjct: 241 WAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVN 299

[Close]

BLAST of IVF0019351.2 vs. NCBI nr
Match: XP_042504770.1 (LOW QUALITY PROTEIN: 60S ribosomal protein L2, mitochondrial [Macadamia integrifolia])

HSP 1 Score: 558 bits (1439), Expect = 3.66e-197
Identity = 305/378 (80.69%), Postives = 315/378 (83.33%), Query Frame = 0


Query: 1   MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM 60
           MIT  T RQS +GRALRQFT  TGKSAGRNSSGRITVF  GGGSKRLQRRIDLKRSTSSM
Sbjct: 1   MITRYTMRQSLQGRALRQFTFFTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSM 60

Query: 61  GIVERIEYDPNRSSRIHPVRWIEGV---RQRKCKTQEEFAPQPQILEPTTTTIRGLFSFS 120
           GIVERIEYDPNRSSRI PVRWIEGV   RQRKC T EEFAP  +ILEPTTTTIRGLFSFS
Sbjct: 61  GIVERIEYDPNRSSRIAPVRWIEGVQLRRQRKCNTIEEFAPPRKILEPTTTTIRGLFSFS 120

Query: 121 SPPGKVDQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFS 180
           S PGKVDQRKVA FSPG MAAYVVVGLPT RMPPWSKS     +  AG    CAKD+FFS
Sbjct: 121 SLPGKVDQRKVACFSPGLMAAYVVVGLPT-RMPPWSKS-----QASAGKVYPCAKDVFFS 180

Query: 181 AFSSQKTKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTH 240
           A SS K KGETASLSFGSSF FPR+AVAGAKPAFFAPRMREKVRGK TFSLCEVRKWRTH
Sbjct: 181 ALSSPKAKGETASLSFGSSFGFPRIAVAGAKPAFFAPRMREKVRGKNTFSLCEVRKWRTH 240

Query: 241 SILWAHRMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACK 300
           SILWAHR+K KAALSW+SFRRQET GLVG AEH ESK + DQGSLPAKPIGEGPKDGACK
Sbjct: 241 SILWAHRIKRKAALSWQSFRRQETDGLVGAAEHNESKPKTDQGSLPAKPIGEGPKDGACK 300

Query: 301 VNLTREERSNGK-AIRPFGSSRT------------------PAEREGLPGRMPMGAGFFE 356
           V+LTREERSNGK AIRPFGSSR+                  PAEREGLPGRMPMGAGFFE
Sbjct: 301 VDLTREERSNGKMAIRPFGSSRSIAHIQXHLIGERGNAHEAPAEREGLPGRMPMGAGFFE 360

[Close]

BLAST of IVF0019351.2 vs. TAIR 10
Match: AT2G07715.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 501.9 bits (1291), Expect = 4.5e-142
Identity = 275/372 (73.92%), Postives = 294/372 (79.03%), Query Frame = 0


Query: 14  RALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRS 73
           RALRQFTLSTGKSAGRNSSGRITVF  GGGSKRL RRIDLKRSTSSMGIVE IEYDPNRS
Sbjct: 7   RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIEYDPNRS 66

Query: 74  SRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPPGKVDQRKVASFSP 133
           S+I PVRWI+G  Q+K  T E+FAP  +ILEPTT TI GLFSFS  PGKVD+RKVA FSP
Sbjct: 67  SQIAPVRWIKGGCQKKMNTIEKFAPPRKILEPTTNTISGLFSFSFLPGKVDKRKVACFSP 126

Query: 134 GRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSQKTKGETASLSF 193
           G MAAYVVVGLP T MPP S S      KGAGS KT  KD+FFSAFSS K K ETASL+F
Sbjct: 127 GLMAAYVVVGLP-TGMPPLSSSKSAFASKGAGSTKTLVKDVFFSAFSSLKAKRETASLAF 186

Query: 194 GSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSILWAHRMKGKAALSW 253
            SSF FPR+AVAGAKPAFFAPRMR+KVRGK TFSLCEV+K RTHSILWAHR+KGKA LSW
Sbjct: 187 ASSFGFPRIAVAGAKPAFFAPRMRQKVRGKSTFSLCEVQKGRTHSILWAHRIKGKAGLSW 246

Query: 254 RSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGE-----------GPKDGACKVNLTR 313
           +SFRRQ+TLGLVG A HK+SK + DQG+LPAKPIGE             KDGACKV+LTR
Sbjct: 247 QSFRRQDTLGLVGAAGHKKSKPKTDQGNLPAKPIGERAKQLKALRGLRAKDGACKVDLTR 306

Query: 314 EERSNGKAIRPFGSSRT-------------------PAEREGLPGRMPMGAGFFEKARAD 356
           EERSNGKAIRPFGSSR+                   P EREGLPGRMPMGAGFFEKARAD
Sbjct: 307 EERSNGKAIRPFGSSRSIAHIQISYLIGERGNTHEAPTEREGLPGRMPMGAGFFEKARAD 366

[Close]

BLAST of IVF0019351.2 vs. TAIR 10
Match: ATMG00560.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 408.7 bits (1049), Expect = 5.2e-114
Identity = 223/297 (75.08%), Postives = 241/297 (81.14%), Query Frame = 0


Query: 14  RALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRS 73
           RALRQFTLSTGKSAGRNSSGRITVF  GGGSKRL RRIDLKRSTSSMGIVE IEYDPNRS
Sbjct: 7   RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIEYDPNRS 66

Query: 74  SRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPPGKVDQRKVASFSP 133
           S+I PVRWI+G  Q+K  T E+FAP  +ILEPTT TI GLFSFS  PGKVD+RKVA FSP
Sbjct: 67  SQIAPVRWIKGGCQKKMNTIEKFAPPRKILEPTTNTISGLFSFSFLPGKVDKRKVACFSP 126

Query: 134 GRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSQKTKGETASLSF 193
           G MAAYVVVGLP T MPP S S      KGAGS KT  KD+FFSAFSS K K ETASL+F
Sbjct: 127 GLMAAYVVVGLP-TGMPPLSSSKSAFASKGAGSTKTLVKDVFFSAFSSPKAKRETASLAF 186

Query: 194 GSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSILWAHRMKGKAALSW 253
            SSF FPR+AVAGAKPAFFAPRMR+KVRGK TFSLCEV+K RTHSILWAHR+KGKA LSW
Sbjct: 187 ASSFGFPRIAVAGAKPAFFAPRMRQKVRGKSTFSLCEVQKGRTHSILWAHRIKGKAGLSW 246

Query: 254 RSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGE-----------GPKDGACKVN 300
           +SFRRQ+TLGLVG A HK+SK + DQG+LPAKPIGE             KDGACKV+
Sbjct: 247 QSFRRQDTLGLVGAAGHKKSKPKTDQGNLPAKPIGERAKQLKALRGLRAKDGACKVD 302

[Close]

BLAST of IVF0019351.2 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-05
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 28  GRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM-GIVERIEYDPNRSSRIHPVRWIEGVR 87
           GRN+ G IT    GGG KRL R+ID +R+   + G +  IEYDPNR++ I  + + +G +
Sbjct: 40  GRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

[Close]

BLAST of IVF0019351.2 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-05
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 28  GRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSM-GIVERIEYDPNRSSRIHPVRWIEGVR 87
           GRN+ G IT    GGG KRL R+ID +R+   + G +  IEYDPNR++ I  + + +G +
Sbjct: 40  GRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

The following BLAST results are available for this feature:

BLAST of IVF0019351.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93311	7.4e-113	75.08	60S ribosomal protein L2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL2 ...	[more]
P0C8K6	8.5e-77	55.22	60S ribosomal protein L2, mitochondrial OS=Oryza sativa OX=4530 GN=RPL2 PE=3 SV=...	[more]
Q2F969	8.5e-77	55.22	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 G...	[more]
P92812	8.5e-77	55.22	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
P26859	5.6e-28	41.96	60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL2...	[more]

BLAST of IVF0019351.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
G3EU27	1.2e-163	100.00	Ribosomal protein L2 OS=Cucumis melo subsp. melo OX=412675 GN=rpl2 PE=3 SV=1	[more]
A0A3S9JIH9	1.2e-163	100.00	Ribosomal protein L2 OS=Cucumis melo var. momordica OX=2034244 GN=rpl2 PE=3 SV=1	[more]
G3EIZ1	3.1e-162	99.00	Ribosomal protein L2 OS=Cucumis sativus OX=3659 GN=rpl2 PE=3 SV=1	[more]
A0A200Q8E8	2.8e-147	74.44	Ribosomal protein L2 OS=Macleaya cordata OX=56857 GN=BVC80_6573g1 PE=3 SV=1	[more]
A0A7D5XZ32	4.2e-143	92.12	Ribosomal protein L2 OS=Luffa acutangula OX=56866 GN=rpl2 PE=3 SV=1	[more]

BLAST of IVF0019351.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521202.1	6.74e-214	83.55	LOW QUALITY PROTEIN: uncharacterized protein LOC111784913 [Cucurbita pepo subsp....	[more]
AEN56111.1	1.98e-208	100.00	ribosomal protein L2 [Cucumis melo subsp. melo]	[more]
AZP40312.1	2.13e-208	100.00	ribosomal protein L2 [Cucumis melo var. momordica]	[more]
YP_004849339.1	8.23e-207	99.00	ribosomal protein L2 [Cucumis sativus] >ADZ10766.1 ribosomal protein L2 [Cucumis...	[more]
XP_042504770.1	3.66e-197	80.69	LOW QUALITY PROTEIN: 60S ribosomal protein L2, mitochondrial [Macadamia integrif...	[more]

BLAST of IVF0019351.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07715.1	4.5e-142	73.92	Nucleic acid-binding, OB-fold-like protein	[more]
ATMG00560.1	5.2e-114	75.08	Nucleic acid-binding, OB-fold-like protein	[more]
ATCG00830.1	1.8e-05	42.62	ribosomal protein L2	[more]
ATCG01310.1	1.8e-05	42.62	ribosomal protein L2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002171	Ribosomal protein L2	SMART	SM01383	Ribosomal_L2_2	coord: 28..111 e-value: 2.4E-14 score: 63.7
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 10..290
IPR022666	Ribosomal Proteins L2, RNA binding domain	PFAM	PF00181	Ribosomal_L2	coord: 28..76 e-value: 8.8E-11 score: 41.6
None	No IPR available	GENE3D	2.40.50.140		coord: 11..97 e-value: 9.4E-20 score: 72.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..294
None	No IPR available	PANTHER	PTHR13691:SF44	60S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL-RELATED	coord: 10..290
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 8..86

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0019351	IVF0019351	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0019351.2-exon	IVF0019351.2-exon-tig00007088:197207..198104	exon
IVF0019351.2-exon	IVF0019351.2-exon-tig00007088:198453..198509	exon
IVF0019351.2-exon	IVF0019351.2-exon-tig00007088:198566..198765	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0019351.2-cds	IVF0019351.2-cds-tig00007088:197207..198104	CDS
IVF0019351.2-cds	IVF0019351.2-cds-tig00007088:198453..198509	CDS
IVF0019351.2-cds	IVF0019351.2-cds-tig00007088:198566..198765	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0019351.2	IVF0019351.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0032543	mitochondrial translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003729	mRNA binding