IVF0019134.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0019134.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Copper transporter
Location	chr12: 1424302 .. 1424806 (-)
Sequence length	505
RNA-Seq Expression	IVF0019134.1
Synteny	IVF0019134.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATGGAAACCCACATGACATTTTATTGGGGAAAGACGGTGGAGATCCTCTTCGTCGGCTGGCCCGGTCGGAGCTTTTTCTCTTACACCGTTGCTTTAATCTTTGTTTTTCTTCTCGCCTTCACCGTGGAGTGGCTCTCACACACTAAATTCACCACTCTCGTCGTTGGCAACCTCACTGCCGGCCTGGTTCAGACCATCCTATACGGTGTTCGGGTGGGATTGGCTTTCATTGTCATGCTGGCCGTCATGTCATATAATGTTGGAGTTTTGCTAGCGGCAGTAACTGGATATTCAATGGGGTTCTTGGTTTATGGGAGTCAAGTATTTAGTAGATCGAAAGTTGATCAAAATTTAAATTTAGATTTGTCTGATCTTCCACCACTTAATTGTTAGTACCATGACAAACCTCAATATTTTATGAAAGATATTTGTTTTAGATAAAAATATTTTGAGAAAAAGTCTTAAATATGTCTATTTCTTAAATTTCCATGTCAGAGAG

mRNA sequence

ATGAAAATGGAAACCCACATGACATTTTATTGGGGAAAGACGGTGGAGATCCTCTTCGTCGGCTGGCCCGGTCGGAGCTTTTTCTCTTACACCGTTGCTTTAATCTTTGTTTTTCTTCTCGCCTTCACCGTGGAGTGGCTCTCACACACTAAATTCACCACTCTCGTCGTTGGCAACCTCACTGCCGGCCTGGTTCAGACCATCCTATACGGTGTTCGGGTGGGATTGGCTTTCATTGTCATGCTGGCCGTCATGTCATATAATGTTGGAGTTTTGCTAGCGGCAGTAACTGGATATTCAATGGGGTTCTTGGTTTATGGGAGTCAAGTATTTAGTAGATCGAAAGTTGATCAAAATTTAAATTTAGATTTGTCTGATCTTCCACCACTTAATTGTTAGTACCATGACAAACCTCAATATTTTATGAAAGATATTTGTTTTAGATAAAAATATTTTGAGAAAAAGTCTTAAATATGTCTATTTCTTAAATTTCCATGTCAGAGAG

Coding sequence (CDS)

ATGAAAATGGAAACCCACATGACATTTTATTGGGGAAAGACGGTGGAGATCCTCTTCGTCGGCTGGCCCGGTCGGAGCTTTTTCTCTTACACCGTTGCTTTAATCTTTGTTTTTCTTCTCGCCTTCACCGTGGAGTGGCTCTCACACACTAAATTCACCACTCTCGTCGTTGGCAACCTCACTGCCGGCCTGGTTCAGACCATCCTATACGGTGTTCGGGTGGGATTGGCTTTCATTGTCATGCTGGCCGTCATGTCATATAATGTTGGAGTTTTGCTAGCGGCAGTAACTGGATATTCAATGGGGTTCTTGGTTTATGGGAGTCAAGTATTTAGTAGATCGAAAGTTGATCAAAATTTAAATTTAGATTTGTCTGATCTTCCACCACTTAATTGTTAG

Protein sequence

MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNLNLDLSDLPPLNC

Homology

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BLAST of IVF0019134.1 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 4.3e-28
Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = 0


Query: 1   MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVG-- 60
           MKM  HMTF+WGK  E+LF GWPG S   Y + LIFVF LA   EWL+H+       G  
Sbjct: 38  MKMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDS 97

Query: 61  -NLTAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVD 120
            N  AGL+QT +Y +R+GLA++VMLAVMS+N GV L A+ G+++GF+++GSQ F  +  D
Sbjct: 98  ANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSDD 157

Query: 121 QNLNLDLSDLPPLNC 133
           +  N     +PP  C
Sbjct: 158 RKTNY----VPPSGC 168

[Close]

BLAST of IVF0019134.1 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-23
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVG-NLT 62
           M  HMTF+WGK  E+LF GWPG S   Y + LI +FLLA   EWL+H+    +    N  
Sbjct: 28  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRA 87

Query: 63  AGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQ 119
           AGL QT +Y ++ GL+++VMLAVMS+N GV + A+ GY +GF ++GS  F +   DQ
Sbjct: 88  AGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSDDQ 144

[Close]

BLAST of IVF0019134.1 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22
Identity = 57/114 (50.00%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 6   HMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA-GL 65
           HMTF+WGK  EILF GWPG S   Y + LI VFLLA  VEWL+H+           A GL
Sbjct: 26  HMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGL 85

Query: 66  VQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQ 119
           VQT +Y ++ GLA++VMLAVMS+N GV + A+ G+++GF+++GS  F     D+
Sbjct: 86  VQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTAFKNPSDDE 139

[Close]

BLAST of IVF0019134.1 vs. ExPASy Swiss-Prot
Match: Q9FGU8 (Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.3e-20
Identity = 51/106 (48.11%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 6   HMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTAGLV 65
           HMTF+WGKT E+LF GWPG S   Y V L  +F+++   E LS   F      +L  GL+
Sbjct: 31  HMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGLL 90

Query: 66  QTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVF 112
           QT +Y VR  L+++VMLAVMS+N GV +AA+ G+ +GF+++GS+ F
Sbjct: 91  QTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAF 136

[Close]

BLAST of IVF0019134.1 vs. ExPASy Swiss-Prot
Match: Q5ZD08 (Copper transporter 3 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT3 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.8e-17
Identity = 52/106 (49.06%), Postives = 69/106 (65.09%), Query Frame = 0


Query: 2   KMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKF-TTLVVGNL 61
           K   HMTFYWGK  EILF GWPG S   Y +AL  VF LA  +E+L   +   +  +G+ 
Sbjct: 25  KRYMHMTFYWGKNSEILFTGWPGASGGMYALALAAVFALAVLLEFLGSPRVQESSSLGSR 84

Query: 62  TAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVY 107
                   ++ VRVGLA+++MLA+MS+NVGVLLAAV G++ GFL +
Sbjct: 85  RRRATAAAVHAVRVGLAYLLMLALMSFNVGVLLAAVAGHAAGFLAF 130

[Close]

BLAST of IVF0019134.1 vs. ExPASy TrEMBL
Match: A0A5D3BC00 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001700 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNL 60
           MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNL
Sbjct: 1   MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNL 60

Query: 61  TAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNL 120
           TAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNL
Sbjct: 61  TAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNL 120

Query: 121 NLDLSDLPPLNC 133
           NLDLSDLPPLNC
Sbjct: 121 NLDLSDLPPLNC 132

[Close]

BLAST of IVF0019134.1 vs. ExPASy TrEMBL
Match: A0A5A7SL08 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00120 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.9e-64
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNL 60
           MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNL
Sbjct: 1   MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNL 60

Query: 61  TAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNL 120
           TAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGS+VFSRSKVDQNL
Sbjct: 61  TAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSRVFSRSKVDQNL 120

Query: 121 NLDLSDLPPLNC 133
           NLDLSDLPPLNC
Sbjct: 121 NLDLSDLPPLNC 132

[Close]

BLAST of IVF0019134.1 vs. ExPASy TrEMBL
Match: A0A0A0LXH5 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526835 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.8e-54
Identity = 110/130 (84.62%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA 62
           METHMTFYWGKT+EILF GWPGRSFFS  + LIFVFLLAFTVEWLSHTKFTT  + NLTA
Sbjct: 1   METHMTFYWGKTIEILFPGWPGRSFFSSVIVLIFVFLLAFTVEWLSHTKFTTSAMDNLTA 60

Query: 63  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNLNL 122
           GLVQTILYG+RVGLAFIVMLAVMSYNVG+LLAAVTGYS+GFLVYGS++F+RSK+D NLNL
Sbjct: 61  GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVYGSKIFNRSKIDPNLNL 120

Query: 123 DLSDLPPLNC 133
           D  DLPPLNC
Sbjct: 121 DSLDLPPLNC 130

[Close]

BLAST of IVF0019134.1 vs. ExPASy TrEMBL
Match: A0A6J1KDT9 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493433 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.8e-45
Identity = 95/130 (73.08%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA 62
           ME HMTF+WGK+ EILF GWPGRS  SY +AL+F+FL+AF VEWLSHTK T  V  ++ A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFIFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 63  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNLNL 122
           G VQT LYGVRVGLAF+VMLAVMS+NVGVLLAAV GYS+GFLVYGS+VF+RSK+D  LNL
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKID--LNL 120

Query: 123 DLSDLPPLNC 133
           ++SD+PPLNC
Sbjct: 121 NMSDIPPLNC 128

[Close]

BLAST of IVF0019134.1 vs. ExPASy TrEMBL
Match: A0A6J1GAH5 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452258 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-44
Identity = 95/130 (73.08%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA 62
           ME HMTF+WGK+ EILF GWPGR+  SY +AL+FVFL+AF VEWLSHTK T  V  ++ A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 63  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNLNL 122
           G VQT LYGVRVGLAF+VMLAVMS+NVGVLLAAV GYS+GFLVYGS+VF+RSK+D  LNL
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKID--LNL 120

Query: 123 DLSDLPPLNC 133
           ++SD+PPLNC
Sbjct: 121 NMSDIPPLNC 128

[Close]

BLAST of IVF0019134.1 vs. NCBI nr
Match: TYJ97360.1 (putative Copper transporter [Cucumis melo var. makuwa])

HSP 1 Score: 256 bits (655), Expect = 5.75e-86
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNL 60
           MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNL
Sbjct: 1   MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNL 60

Query: 61  TAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNL 120
           TAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNL
Sbjct: 61  TAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNL 120

Query: 121 NLDLSDLPPLNC 132
           NLDLSDLPPLNC
Sbjct: 121 NLDLSDLPPLNC 132

[Close]

BLAST of IVF0019134.1 vs. NCBI nr
Match: KAA0031772.1 (putative Copper transporter [Cucumis melo var. makuwa])

HSP 1 Score: 255 bits (651), Expect = 2.34e-85
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNL 60
           MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNL
Sbjct: 1   MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNL 60

Query: 61  TAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNL 120
           TAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGS+VFSRSKVDQNL
Sbjct: 61  TAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSRVFSRSKVDQNL 120

Query: 121 NLDLSDLPPLNC 132
           NLDLSDLPPLNC
Sbjct: 121 NLDLSDLPPLNC 132

[Close]

BLAST of IVF0019134.1 vs. NCBI nr
Match: XP_023525766.1 (copper transporter 1-like [Cucurbita pepo subsp. pepo] >KAG7036956.1 Copper transporter 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191 bits (485), Expect = 4.17e-60
Identity = 96/130 (73.85%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA 62
           ME HMTF+WGK+ EILF GWPGRS  SY +AL+FVFL+AF VEWLSHTK T  V  ++ A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 63  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNLNL 122
           G VQT LYGVRVGLAF+VMLAVMS+NVGVLLAAV GYS+GFLVYGS+VF+RSK+D  LNL
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKID--LNL 120

Query: 123 DLSDLPPLNC 132
           ++SD+PPLNC
Sbjct: 121 NMSDIPPLNC 128

[Close]

BLAST of IVF0019134.1 vs. NCBI nr
Match: XP_022998910.1 (copper transporter 1-like [Cucurbita maxima])

HSP 1 Score: 191 bits (484), Expect = 5.93e-60
Identity = 95/130 (73.08%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA 62
           ME HMTF+WGK+ EILF GWPGRS  SY +AL+F+FL+AF VEWLSHTK T  V  ++ A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRSSLSYAIALVFIFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 63  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNLNL 122
           G VQT LYGVRVGLAF+VMLAVMS+NVGVLLAAV GYS+GFLVYGS+VF+RSK+D  LNL
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKID--LNL 120

Query: 123 DLSDLPPLNC 132
           ++SD+PPLNC
Sbjct: 121 NMSDIPPLNC 128

[Close]

BLAST of IVF0019134.1 vs. NCBI nr
Match: XP_022948639.1 (copper transporter 1-like [Cucurbita moschata])

HSP 1 Score: 190 bits (482), Expect = 1.20e-59
Identity = 95/130 (73.08%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA 62
           ME HMTF+WGK+ EILF GWPGR+  SY +AL+FVFL+AF VEWLSHTK T  V  ++ A
Sbjct: 1   MEFHMTFFWGKSAEILFAGWPGRNSLSYAIALVFVFLVAFAVEWLSHTKLTASVADDVFA 60

Query: 63  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQNLNL 122
           G VQT LYGVRVGLAF+VMLAVMS+NVGVLLAAV GYS+GFLVYGS+VF+RSK+D  LNL
Sbjct: 61  GFVQTALYGVRVGLAFVVMLAVMSFNVGVLLAAVAGYSVGFLVYGSRVFNRSKID--LNL 120

Query: 123 DLSDLPPLNC 132
           ++SD+PPLNC
Sbjct: 121 NMSDIPPLNC 128

[Close]

BLAST of IVF0019134.1 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 125.6 bits (314), Expect = 3.0e-29
Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = 0


Query: 1   MKMETHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVG-- 60
           MKM  HMTF+WGK  E+LF GWPG S   Y + LIFVF LA   EWL+H+       G  
Sbjct: 38  MKMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDS 97

Query: 61  -NLTAGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVD 120
            N  AGL+QT +Y +R+GLA++VMLAVMS+N GV L A+ G+++GF+++GSQ F  +  D
Sbjct: 98  ANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSDD 157

Query: 121 QNLNLDLSDLPPLNC 133
           +  N     +PP  C
Sbjct: 158 RKTNY----VPPSGC 168

[Close]

BLAST of IVF0019134.1 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-24
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 3   METHMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVG-NLT 62
           M  HMTF+WGK  E+LF GWPG S   Y + LI +FLLA   EWL+H+    +    N  
Sbjct: 28  MMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRA 87

Query: 63  AGLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQ 119
           AGL QT +Y ++ GL+++VMLAVMS+N GV + A+ GY +GF ++GS  F +   DQ
Sbjct: 88  AGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSDDQ 144

[Close]

BLAST of IVF0019134.1 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 107.5 bits (267), Expect = 8.6e-24
Identity = 57/114 (50.00%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 6   HMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTA-GL 65
           HMTF+WGK  EILF GWPG S   Y + LI VFLLA  VEWL+H+           A GL
Sbjct: 26  HMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGL 85

Query: 66  VQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVFSRSKVDQ 119
           VQT +Y ++ GLA++VMLAVMS+N GV + A+ G+++GF+++GS  F     D+
Sbjct: 86  VQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTAFKNPSDDE 139

[Close]

BLAST of IVF0019134.1 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 98.2 bits (243), Expect = 5.2e-21
Identity = 51/106 (48.11%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 6   HMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLVVGNLTAGLV 65
           HMTF+WGKT E+LF GWPG S   Y V L  +F+++   E LS   F      +L  GL+
Sbjct: 31  HMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGLL 90

Query: 66  QTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVF 112
           QT +Y VR  L+++VMLAVMS+N GV +AA+ G+ +GF+++GS+ F
Sbjct: 91  QTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAF 136

[Close]

BLAST of IVF0019134.1 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 84.3 bits (207), Expect = 7.8e-17
Identity = 46/109 (42.20%), Postives = 67/109 (61.47%), Query Frame = 0


Query: 6   HMTFYWGKTVEILFVGWPGRSFFSYTVALIFVFLLAFTVEWLSHTKFTTLV---VGNLTA 65
           H TFYWG   ++LF GWPG     Y +ALIFVF LAF  EWL+     + +      L  
Sbjct: 31  HPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKLAK 90

Query: 66  GLVQTILYGVRVGLAFIVMLAVMSYNVGVLLAAVTGYSMGFLVYGSQVF 112
              +T +Y V+ G +++V+LAV+S+N GV LAA+ G+++GF V+  + F
Sbjct: 91  VAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAF 139

The following BLAST results are available for this feature:

BLAST of IVF0019134.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39065	4.3e-28	48.89	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q9STG2	1.4e-23	47.86	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
Q8GWP3	1.2e-22	50.00	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q9FGU8	7.3e-20	48.11	Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1	[more]
Q5ZD08	5.8e-17	49.06	Copper transporter 3 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT3 PE=2 SV=1	[more]

BLAST of IVF0019134.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BC00	1.3e-64	100.00	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G0...	[more]
A0A5A7SL08	3.9e-64	99.24	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G0...	[more]
A0A0A0LXH5	2.8e-54	84.62	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526835 PE=3 SV=1	[more]
A0A6J1KDT9	6.8e-45	73.08	Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493433 PE=3 SV=1	[more]
A0A6J1GAH5	1.2e-44	73.08	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452258 PE=3 SV=1	[more]

BLAST of IVF0019134.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97360.1	5.75e-86	100.00	putative Copper transporter [Cucumis melo var. makuwa]	[more]
KAA0031772.1	2.34e-85	99.24	putative Copper transporter [Cucumis melo var. makuwa]	[more]
XP_023525766.1	4.17e-60	73.85	copper transporter 1-like [Cucurbita pepo subsp. pepo] >KAG7036956.1 Copper tran...	[more]
XP_022998910.1	5.93e-60	73.08	copper transporter 1-like [Cucurbita maxima]	[more]
XP_022948639.1	1.20e-59	73.08	copper transporter 1-like [Cucurbita moschata]	[more]

BLAST of IVF0019134.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59030.1	3.0e-29	48.89	copper transporter 1	[more]
AT3G46900.1	1.0e-24	47.86	copper transporter 2	[more]
AT2G26975.1	8.6e-24	50.00	Ctr copper transporter family	[more]
AT5G59040.1	5.2e-21	48.11	copper transporter 3	[more]
AT2G37925.1	7.8e-17	42.20	copper transporter 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 7..52 e-value: 6.9E-6 score: 26.7 coord: 61..105 e-value: 6.3E-8 score: 33.3
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 3..131
None	No IPR available	PANTHER	PTHR12483:SF86	SUBFAMILY NOT NAMED	coord: 3..131

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0019134	IVF0019134	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0019134.1-exon	IVF0019134.1-exon-chr12:1424302..1424806	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0019134.1-three_prime_utr	IVF0019134.1-three_prime_utr-chr12:1424302..1424407	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0019134.1-cds	IVF0019134.1-cds-chr12:1424408..1424806	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0019134.1	IVF0019134.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035434	copper ion transmembrane transport
biological_process	GO:0006878	cellular copper ion homeostasis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity