IVF0018584.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0018584.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	trihelix transcription factor GT-3b-like
Location	chr08: 26100318 .. 26102786 (-)
Sequence length	918
RNA-Seq Expression	IVF0018584.1
Synteny	IVF0018584.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATTTTTGCGATCTTCGCCGTGCTGTTCGTCTTCATCGAATCGCTGGCGTTAATGCGGATCAGGCGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACTGGAGACGAAGGAATTGCTTGCGATTAGAGCGGCGTTGGATAAGAATTTCTCGGAGATGAAACAGAATAGAATGCTTTGGATTTCGGTGGCCGGAAAGATGAAGGCTAAAGGCTTTAATCGAAGCGACGAGCAGTGTAAATGTAAATGGAAAAATCTTGTCACTCGTTATAAGGTAATGAAAATGAATACTCTTCTTTTAGGGTTTTTGATATGTAACCGCTACCTTTAATTTAATATCAAAATATATTTGTTCGGTTCTAATTTTATTAAATTTTAAATTTAATATAACTAATTTACTCTTCGGTTTGAAATTTTTATGTTTTTAAAAAAATCAAGTTTAGAATTTCGATCTACATAAAATTTAATTTGATTTAATAGACGATCAATTGATTTTAAAAATTTGCTTAAAATTTTAGACATATTATTAATTACAAAATCGAAGATTTAGAGTTGGATTAAATACAAAACCAAAAGGATTTCTTCCAAATACAAAACTAAAAGTTTATTCATCTATTAAATATTTTTGAATTGTCATAGTTCATATTCTCTAACGCTCCCCTTTCACATATTGTTCAAATTAAACTCTTAAAAACTAATACGAATAATTATGTGTCAAATCTGAGGGTTAAGGCATCAAATCTAACAATTTTTCTTTACCATCTTAGATTAACCTATCATTAAAAAAAAATTGAAAAAACTGTAAAAATGCAATGTTGAAATTCTTAATTAGCTTTTTAAAAACGATACTTGTTTTCTCACAATTTTGATGCTATAGTCTTCATCAAATTTGGATTCTTGACCAAATAAAAAAAAAAAAAAAAAAAGGATGAGTAGAAAGAACATTTATAAGCTTAATTTAAAAACTTGGCATGTGATTTATTTGTTATTGTTATTATTATTTTTAACAACTGGTGTACTGATTTGATTTTTTAGAAACAGGGAAATAAAGAAAATCGTGACATAAAGGATTTTGCAGCCTGAAGTAATATAATAATATGGTCTTATATTTAATTTTGAGAAGGAAGTGTGCAAGTTACTCGTTCAATAATTTCTATATAGAAAAACAGTAAACTTTATAATATAAATCGAGAATTTGACACATTAATCTCATAATATTCCATATTAACGTATCTGAAGAAAAGACATTGCATATTAACAAAATATTCCTTCATTCTTCCACAAGAAATTCATTGCTAATGACCTAAAAAAACCAACGTATTTCCATATGAAAATTGAAATTAATTTATTCAAAACTATCAAGTCATTTTCGAGTTCAAGAAAAAATCTATAAATATTTTAAATATATAATTACAAACAAATTAACTTATAAAAATATTTTAAAAAAAGAGAATTAAGTAAGAAAAAAAGAACAAAATAATTAAAAGATAAATTGTTAATTACCAAACACAATCACAAGTATATTACTTCTGTCTGTAAGTTGTTAATAATAGACAAAGATAAAATAAGGCACTATGTGTCAATTATGAAACAAATTTTCTCTATCTTTTTTTTTTTCTTTTAATTTTTGTTATTCTCCTTACTAACTCTCAACAGTCTTTACACATACAGGGTTGTGAAACTATGGATCCCAAAGCTCTAAAGCATCAATTTCCATTTTACGACGACCTTCATACAATTTTTACTGCAAGGATGCAAAAGAATTGGTGGGTCGAAGCCGAAAACCGATCTGGAGTCTTGAAAAGGAAAGCAAACGAGGATCCGAGTGGTGATAGAGAATTAGAAAACGAAGAAAAAACAAAAACGAAAAATGTCACAAAAAAGAGGAAATGGAAAAGGGATAATGATCTTGAAGAACATGAGAGGAATTTGGAGGAAATATTGAAGGATTTCTGAAAAGAGAGATGGAAATGGAGAGGGAATGGAGAGAAGCATTTAGGGTTAGAGAAGAAGAGAGAAGGTTAAAAGAGGAAGAATGGAGAATGAAAATGGAAGGTATTGAGAGAGAGAAGATGACGATGGAGATATTATGGAGAGAAAATGAAGAAAAGAGAAGAGAAAGAGAAGAAGCAAGAGCTCAGAAAACAGATGCTTTGATCTCTGCTTTGTTGACCAACCTCACGTAATTAAGGTAAGGTTATTAAAGGTATTAATGTGGGTAACAAATTAAGTAACAGTTAAGTTATATATTATTACATGATCTAATTCATTTTCTATATAGAAGTGTGATTTGTTGAGTAAAAACCAGATCATTACTGTTCTTAGGAGGTTATGTGTAACTGTAGGATCAACAATGATCAATTCATTCGTACAAAGTTTACAGTCCCAAAATACTATGCCGTTCAACCACACCTATTTGCGATTTGATAGTGAAGGTTTCCCCATTTCAATATGAGTTGCAGAGCTG

mRNA sequence

ATGGAAGATTTTTGCGATCTTCGCCGTGCTGTTCGTCTTCATCGAATCGCTGGCGTTAATGCGGATCAGGCGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACTGGAGACGAAGGAATTGCTTGCGATTAGAGCGGCGTTGGATAAGAATTTCTCGGAGATGAAACAGAATAGAATGCTTTGGATTTCGGTGGCCGGAAAGATGAAGGCTAAAGGCTTTAATCGAAGCGACGAGCAGTGTAAATGTAAATGGAAAAATCTTGTCACTCGTTATAAGGGTTGTGAAACTATGGATCCCAAAGCTCTAAAGCATCAATTTCCATTTTACGACGACCTTCATACAATTTTTACTGCAAGGATGCAAAAGAATTGGTGGGTCGAAGCCGAAAACCGATCTGGAGTCTTGAAAAGGAAAGCAAACGAGGATCCGAGTGGTGATAGAGAATTAGAAAACGAAGAAAAAACAAAAACGAAAAATGTCACAAAAAAGAGGAAATGGAAAAGGGATAATGATCTTGAAGAACATGAGAGGAATTTGGAGGAAATATTGAAGGATTTCTGAAAAGAGAGATGGAAATGGAGAGGGAATGGAGAGAAGCATTTAGGGTTAGAGAAGAAGAGAGAAGGTTAAAAGAGGAAGAATGGAGAATGAAAATGGAAGGTATTGAGAGAGAGAAGATGACGATGGAGATATTATGGAGAGAAAATGAAGAAAAGAGAAGAGAAAGAGAAGAAGCAAGAGCTCAGAAAACAGATGCTTTGATCTCTGCTTTGTTGACCAACCTCACGTAATTAAGGATCAACAATGATCAATTCATTCGTACAAAGTTTACAGTCCCAAAATACTATGCCGTTCAACCACACCTATTTGCGATTTGATAGTGAAGGTTTCCCCATTTCAATATGAGTTGCAGAGCTG

Coding sequence (CDS)

ATGGAAGATTTTTGCGATCTTCGCCGTGCTGTTCGTCTTCATCGAATCGCTGGCGTTAATGCGGATCAGGCGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACTGGAGACGAAGGAATTGCTTGCGATTAGAGCGGCGTTGGATAAGAATTTCTCGGAGATGAAACAGAATAGAATGCTTTGGATTTCGGTGGCCGGAAAGATGAAGGCTAAAGGCTTTAATCGAAGCGACGAGCAGTGTAAATGTAAATGGAAAAATCTTGTCACTCGTTATAAGGGTTGTGAAACTATGGATCCCAAAGCTCTAAAGCATCAATTTCCATTTTACGACGACCTTCATACAATTTTTACTGCAAGGATGCAAAAGAATTGGTGGGTCGAAGCCGAAAACCGATCTGGAGTCTTGAAAAGGAAAGCAAACGAGGATCCGAGTGGTGATAGAGAATTAGAAAACGAAGAAAAAACAAAAACGAAAAATGTCACAAAAAAGAGGAAATGGAAAAGGGATAATGATCTTGAAGAACATGAGAGGAATTTGGAGGAAATATTGAAGGATTTCTGA

Protein sequence

MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRMLWISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKANEDPSGDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLEEILKDF

Homology

[Close]

BLAST of IVF0018584.1 vs. ExPASy Swiss-Prot
Match: O80450 (Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.0e-35
Identity = 81/176 (46.02%), Postives = 106/176 (60.23%), Query Frame = 0


Query: 24  AAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRMLWISVAGKMKAKGFNRSDEQCKCK 83
           A GDRFP WSV ETKEL+ IR  LD+ F E K+N++LW  ++ KM+ K F RS EQCKCK
Sbjct: 34  AVGDRFPQWSVEETKELIGIRGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQCKCK 93

Query: 84  WKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKANE-D 143
           WKNLVTR+KGCETM+ +  + QFPFYDD+  IFT RMQ+  W E+E   G     A + +
Sbjct: 94  WKNLVTRFKGCETMEAETARQQFPFYDDMQNIFTTRMQRMLWAESEGGGGGTSGAARKRE 153

Query: 144 PSGDRELENEEK------------TKTKNVTKKRKWKRDNDLEEHERNLEEILKDF 187
            S D E EN  +               KN+ KKR  K  ++       + E+L++F
Sbjct: 154 YSSDEEEENVNEELVDVSNDPKILNPKKNIAKKR--KGGSNSSNSNNGVREVLEEF 207

[Close]

BLAST of IVF0018584.1 vs. ExPASy Swiss-Prot
Match: Q9SDW0 (Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.5e-34
Identity = 74/134 (55.22%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 26  GDRFPPWSVLETKELLAIRAALDKNFSEMKQNRMLWISVAGKMKAKGFNRSDEQCKCKWK 85
           G+R P WS+ ETKELLAIR  LD+ F E K+N++LW  VA KM  KGF RS EQCK KWK
Sbjct: 46  GERIPQWSIEETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWK 105

Query: 86  NLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKANEDPSG 145
           NLVTRYK CET +P A++ QFPFY+++ +IF ARMQ+  W EA   S   KRK ++  S 
Sbjct: 106 NLVTRYKACETTEPDAIRQQFPFYNEIQSIFEARMQRMLWSEATEPSTSSKRKHHQFSSD 165

Query: 146 DRELENEEKTKTKN 160
           D E E +E  +  N
Sbjct: 166 DEEEEVDEPNQDIN 179

[Close]

BLAST of IVF0018584.1 vs. ExPASy Swiss-Prot
Match: Q9LU92 (Trihelix transcription factor GT-4 OS=Arabidopsis thaliana OX=3702 GN=GT-4 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.7e-11
Identity = 32/103 (31.07%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 23  QAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRMLWISVAGKMKAKGFNRSDEQCKC 82
           +A   R   W+  ET+ L+++R  +D  F+  K N+ LW  ++ KM+ KGF+RS   C  
Sbjct: 46  KAPKKRAETWAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTD 105

Query: 83  KWKNLVTRYKGCETMDPKAL---KHQFPFYDDLHTIFTARMQK 123
           KW+N++  +K  +  + KA      +  +Y+++  IF  R +K
Sbjct: 106 KWRNILKEFKKAKQHEDKATSGGSTKMSYYNEIEDIFRERKKK 148

[Close]

BLAST of IVF0018584.1 vs. ExPASy Swiss-Prot
Match: Q9FX53 (Trihelix transcription factor GT-1 OS=Arabidopsis thaliana OX=3702 GN=GT-1 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-09
Identity = 31/100 (31.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 23  QAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRMLWISVAGKMKAKGFNRSDEQCKC 82
           +A   R   W   ET+ L+  R  +D  F+  K N+ LW  ++ KM+ KGF+RS   C  
Sbjct: 78  KAPKKRAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTD 137

Query: 83  KWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARMQK 123
           KW+NL+  +K  +  D      +  +Y ++  I   R +K
Sbjct: 138 KWRNLLKEFKKAKHHDRGNGSAKMSYYKEIEDILRERSKK 177

[Close]

BLAST of IVF0018584.1 vs. ExPASy Swiss-Prot
Match: Q39117 (Trihelix transcription factor GT-2 OS=Arabidopsis thaliana OX=3702 GN=GT-2 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-04
Identity = 38/152 (25.00%), Postives = 70/152 (46.05%), Query Frame = 0


Query: 32  WSVLETKELLAIRAALDKNFSEMKQNRMLWISVAGKMKAKGFNRSDEQCKCKWKNLVTRY 91
           W   E + L+ IR  L+ N+ E      LW  ++  M+  G+NRS ++CK KW+N+   +
Sbjct: 398 WPKTEVEALIRIRKNLEANYQENGTKGPLWEEISAGMRRLGYNRSAKRCKEKWENINKYF 457

Query: 92  KGCETMDPKAL--KHQFPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKANEDPSGDREL 151
           K  +  + K        P++  L  ++  R          N+SG +        +  R+L
Sbjct: 458 KKVKESNKKRPLDSKTCPYFHQLEALYNER----------NKSGAMPLPLPLMVTPQRQL 517

Query: 152 ENEEKTKTKNVTKKRKWKRDNDLEEHERNLEE 182
              ++T+T+  T +R+   D + EE   + E+
Sbjct: 518 LLSQETQTEFETDQREKVGDKEDEEEGESEED 539

[Close]

BLAST of IVF0018584.1 vs. ExPASy TrEMBL
Match: A0A5A7UVF8 (Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold612G00040 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.1e-101
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60
           MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML
Sbjct: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60

Query: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120
           WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM
Sbjct: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120

Query: 121 QKNWWVEAENRSGVLKRKANEDPSGDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLE 180
           QKNWWVEAENRSGVLKRKANEDP+GDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLE
Sbjct: 121 QKNWWVEAENRSGVLKRKANEDPNGDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLE 180

Query: 181 EILKDF 187
           EILK F
Sbjct: 181 EILKGF 186

[Close]

BLAST of IVF0018584.1 vs. ExPASy TrEMBL
Match: A0A1S3CKY0 (trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502137 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.1e-101
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60
           MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML
Sbjct: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60

Query: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120
           WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM
Sbjct: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120

Query: 121 QKNWWVEAENRSGVLKRKANEDPSGDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLE 180
           QKNWWVEAENRSGVLKRKANEDP+GDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLE
Sbjct: 121 QKNWWVEAENRSGVLKRKANEDPNGDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLE 180

Query: 181 EILKDF 187
           EILK F
Sbjct: 181 EILKGF 186

[Close]

BLAST of IVF0018584.1 vs. ExPASy TrEMBL
Match: A0A5D3DZE6 (Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00080 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.5e-101
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60
           MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML
Sbjct: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60

Query: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120
           WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM
Sbjct: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120

Query: 121 QKNWWVEAENRSGVLKRKANEDPSGDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLE 180
           QKNWWVEAENRSGVLKRKANEDP+GDRELENEEKTKTKNVTKKRKWKRDNDLE+HERNLE
Sbjct: 121 QKNWWVEAENRSGVLKRKANEDPNGDRELENEEKTKTKNVTKKRKWKRDNDLEDHERNLE 180

Query: 181 EILKDF 187
           EILK F
Sbjct: 181 EILKGF 186

[Close]

BLAST of IVF0018584.1 vs. ExPASy TrEMBL
Match: A0A1S3CKZ2 (trihelix transcription factor GT-3b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502137 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 8.0e-100
Identity = 184/191 (96.34%), Postives = 185/191 (96.86%), Query Frame = 0


Query: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60
           MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML
Sbjct: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60

Query: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYK-----GCETMDPKALKHQFPFYDDLHTI 120
           WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYK     GCETMDPKALKHQFPFYDDLHTI
Sbjct: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKSLHIQGCETMDPKALKHQFPFYDDLHTI 120

Query: 121 FTARMQKNWWVEAENRSGVLKRKANEDPSGDRELENEEKTKTKNVTKKRKWKRDNDLEEH 180
           FTARMQKNWWVEAENRSGVLKRKANEDP+GDRELENEEKTKTKNVTKKRKWKRDNDLEEH
Sbjct: 121 FTARMQKNWWVEAENRSGVLKRKANEDPNGDRELENEEKTKTKNVTKKRKWKRDNDLEEH 180

Query: 181 ERNLEEILKDF 187
           ERNLEEILK F
Sbjct: 181 ERNLEEILKGF 191

[Close]

BLAST of IVF0018584.1 vs. ExPASy TrEMBL
Match: A0A0A0KZY4 (Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G310210 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.1e-88
Identity = 172/186 (92.47%), Postives = 175/186 (94.09%), Query Frame = 0


Query: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60
           MEDFCDLRRAV  HRI GVNA +AAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML
Sbjct: 1   MEDFCDLRRAV-FHRI-GVNA-EAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60

Query: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120
           WISVA KMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM
Sbjct: 61  WISVAEKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120

Query: 121 QKNWWVEAENRSGVLKRKANEDPSGDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLE 180
           QKNWWVEAENRSG  KRK NEDP+GDRELENEEKTKTKN TKKRKWKRDN  EEHERNL+
Sbjct: 121 QKNWWVEAENRSGGSKRKPNEDPNGDRELENEEKTKTKNGTKKRKWKRDNP-EEHERNLK 180

Query: 181 EILKDF 187
           EILKDF
Sbjct: 181 EILKDF 182

[Close]

BLAST of IVF0018584.1 vs. NCBI nr
Match: XP_008464203.1 (PREDICTED: trihelix transcription factor GT-3b isoform X2 [Cucumis melo] >KAA0059080.1 trihelix transcription factor GT-3b isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 377 bits (968), Expect = 9.61e-131
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60
           MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML
Sbjct: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60

Query: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120
           WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM
Sbjct: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120

Query: 121 QKNWWVEAENRSGVLKRKANEDPSGDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLE 180
           QKNWWVEAENRSGVLKRKANEDP+GDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLE
Sbjct: 121 QKNWWVEAENRSGVLKRKANEDPNGDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLE 180

Query: 181 EILKDF 186
           EILK F
Sbjct: 181 EILKGF 186

[Close]

BLAST of IVF0018584.1 vs. NCBI nr
Match: TYK29247.1 (trihelix transcription factor GT-3b isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 376 bits (965), Expect = 2.75e-130
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60
           MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML
Sbjct: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60

Query: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120
           WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM
Sbjct: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120

Query: 121 QKNWWVEAENRSGVLKRKANEDPSGDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLE 180
           QKNWWVEAENRSGVLKRKANEDP+GDRELENEEKTKTKNVTKKRKWKRDNDLE+HERNLE
Sbjct: 121 QKNWWVEAENRSGVLKRKANEDPNGDRELENEEKTKTKNVTKKRKWKRDNDLEDHERNLE 180

Query: 181 EILKDF 186
           EILK F
Sbjct: 181 EILKGF 186

[Close]

BLAST of IVF0018584.1 vs. NCBI nr
Match: XP_008464201.1 (PREDICTED: trihelix transcription factor GT-3b isoform X1 [Cucumis melo] >XP_008464202.1 PREDICTED: trihelix transcription factor GT-3b isoform X1 [Cucumis melo])

HSP 1 Score: 371 bits (952), Expect = 3.14e-128
Identity = 184/191 (96.34%), Postives = 185/191 (96.86%), Query Frame = 0


Query: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60
           MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML
Sbjct: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60

Query: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYK-----GCETMDPKALKHQFPFYDDLHTI 120
           WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYK     GCETMDPKALKHQFPFYDDLHTI
Sbjct: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKSLHIQGCETMDPKALKHQFPFYDDLHTI 120

Query: 121 FTARMQKNWWVEAENRSGVLKRKANEDPSGDRELENEEKTKTKNVTKKRKWKRDNDLEEH 180
           FTARMQKNWWVEAENRSGVLKRKANEDP+GDRELENEEKTKTKNVTKKRKWKRDNDLEEH
Sbjct: 121 FTARMQKNWWVEAENRSGVLKRKANEDPNGDRELENEEKTKTKNVTKKRKWKRDNDLEEH 180

Query: 181 ERNLEEILKDF 186
           ERNLEEILK F
Sbjct: 181 ERNLEEILKGF 191

[Close]

BLAST of IVF0018584.1 vs. NCBI nr
Match: XP_011653700.1 (trihelix transcription factor GT-3b [Cucumis sativus] >XP_031739717.1 trihelix transcription factor GT-3b [Cucumis sativus] >XP_031739718.1 trihelix transcription factor GT-3b [Cucumis sativus] >KGN54384.1 hypothetical protein Csa_018084 [Cucumis sativus])

HSP 1 Score: 334 bits (856), Expect = 9.55e-114
Identity = 172/186 (92.47%), Postives = 175/186 (94.09%), Query Frame = 0


Query: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60
           MEDFCDLRRAV  HRI GVNA+ AAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML
Sbjct: 1   MEDFCDLRRAV-FHRI-GVNAE-AAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60

Query: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120
           WISVA KMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM
Sbjct: 61  WISVAEKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120

Query: 121 QKNWWVEAENRSGVLKRKANEDPSGDRELENEEKTKTKNVTKKRKWKRDNDLEEHERNLE 180
           QKNWWVEAENRSG  KRK NEDP+GDRELENEEKTKTKN TKKRKWKRDN  EEHERNL+
Sbjct: 121 QKNWWVEAENRSGGSKRKPNEDPNGDRELENEEKTKTKNGTKKRKWKRDNP-EEHERNLK 180

Query: 181 EILKDF 186
           EILKDF
Sbjct: 181 EILKDF 182

[Close]

BLAST of IVF0018584.1 vs. NCBI nr
Match: XP_038883623.1 (trihelix transcription factor GT-3b-like [Benincasa hispida])

HSP 1 Score: 261 bits (667), Expect = 6.92e-85
Identity = 138/195 (70.77%), Postives = 156/195 (80.00%), Query Frame = 0


Query: 1   MEDFCDLRRAVRLHRIAGVNADQAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRML 60
           MED+CD+RRA+   R  G+  + AAGDRFPPWSV ETKELLAIRAALD++FSEMKQNRML
Sbjct: 1   MEDYCDVRRAILYRRPDGIGVNVAAGDRFPPWSVPETKELLAIRAALDRSFSEMKQNRML 60

Query: 61  WISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARM 120
           WISVA KMKAKGFNR+ EQCKCKWKNLVTRYKGCETMDPKA K QFPFY+DLHTIFTAR+
Sbjct: 61  WISVADKMKAKGFNRNHEQCKCKWKNLVTRYKGCETMDPKAQKQQFPFYNDLHTIFTARI 120

Query: 121 QKNWWVEAENRSGVLKRKA-----NEDPSGDRELENEEKT----KTKNVTKKRKWKRDND 180
           Q NWW+EAE+RSG  KRKA     NE+   D E E+E+KT    KTK  TKK KW++   
Sbjct: 121 QNNWWIEAEDRSGGSKRKATGRFSNEENDED-EDEDEDKTFGSTKTKKGTKKGKWRK--- 180

Query: 181 LEEHERNLEEILKDF 186
            EE ERNL+EILK F
Sbjct: 181 -EEDERNLKEILKGF 190

[Close]

BLAST of IVF0018584.1 vs. TAIR 10
Match: AT2G38250.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.1e-36
Identity = 81/176 (46.02%), Postives = 106/176 (60.23%), Query Frame = 0


Query: 24  AAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRMLWISVAGKMKAKGFNRSDEQCKCK 83
           A GDRFP WSV ETKEL+ IR  LD+ F E K+N++LW  ++ KM+ K F RS EQCKCK
Sbjct: 34  AVGDRFPQWSVEETKELIGIRGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQCKCK 93

Query: 84  WKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKANE-D 143
           WKNLVTR+KGCETM+ +  + QFPFYDD+  IFT RMQ+  W E+E   G     A + +
Sbjct: 94  WKNLVTRFKGCETMEAETARQQFPFYDDMQNIFTTRMQRMLWAESEGGGGGTSGAARKRE 153

Query: 144 PSGDRELENEEK------------TKTKNVTKKRKWKRDNDLEEHERNLEEILKDF 187
            S D E EN  +               KN+ KKR  K  ++       + E+L++F
Sbjct: 154 YSSDEEEENVNEELVDVSNDPKILNPKKNIAKKR--KGGSNSSNSNNGVREVLEEF 207

[Close]

BLAST of IVF0018584.1 vs. TAIR 10
Match: AT5G01380.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-35
Identity = 74/134 (55.22%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 26  GDRFPPWSVLETKELLAIRAALDKNFSEMKQNRMLWISVAGKMKAKGFNRSDEQCKCKWK 85
           G+R P WS+ ETKELLAIR  LD+ F E K+N++LW  VA KM  KGF RS EQCK KWK
Sbjct: 46  GERIPQWSIEETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWK 105

Query: 86  NLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARMQKNWWVEAENRSGVLKRKANEDPSG 145
           NLVTRYK CET +P A++ QFPFY+++ +IF ARMQ+  W EA   S   KRK ++  S 
Sbjct: 106 NLVTRYKACETTEPDAIRQQFPFYNEIQSIFEARMQRMLWSEATEPSTSSKRKHHQFSSD 165

Query: 146 DRELENEEKTKTKN 160
           D E E +E  +  N
Sbjct: 166 DEEEEVDEPNQDIN 179

[Close]

BLAST of IVF0018584.1 vs. TAIR 10
Match: AT3G25990.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.8e-12
Identity = 32/103 (31.07%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 23  QAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRMLWISVAGKMKAKGFNRSDEQCKC 82
           +A   R   W+  ET+ L+++R  +D  F+  K N+ LW  ++ KM+ KGF+RS   C  
Sbjct: 46  KAPKKRAETWAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTD 105

Query: 83  KWKNLVTRYKGCETMDPKAL---KHQFPFYDDLHTIFTARMQK 123
           KW+N++  +K  +  + KA      +  +Y+++  IF  R +K
Sbjct: 106 KWRNILKEFKKAKQHEDKATSGGSTKMSYYNEIEDIFRERKKK 148

[Close]

BLAST of IVF0018584.1 vs. TAIR 10
Match: AT1G13450.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-10
Identity = 31/100 (31.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 23  QAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRMLWISVAGKMKAKGFNRSDEQCKC 82
           +A   R   W   ET+ L+  R  +D  F+  K N+ LW  ++ KM+ KGF+RS   C  
Sbjct: 78  KAPKKRAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTD 137

Query: 83  KWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARMQK 123
           KW+NL+  +K  +  D      +  +Y ++  I   R +K
Sbjct: 138 KWRNLLKEFKKAKHHDRGNGSAKMSYYKEIEDILRERSKK 177

[Close]

BLAST of IVF0018584.1 vs. TAIR 10
Match: AT1G13450.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-10
Identity = 31/100 (31.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 23  QAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRMLWISVAGKMKAKGFNRSDEQCKC 82
           +A   R   W   ET+ L+  R  +D  F+  K N+ LW  ++ KM+ KGF+RS   C  
Sbjct: 78  KAPKKRAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTD 137

Query: 83  KWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARMQK 123
           KW+NL+  +K  +  D      +  +Y ++  I   R +K
Sbjct: 138 KWRNLLKEFKKAKHHDRGNGSAKMSYYKEIEDILRERSKK 177

The following BLAST results are available for this feature:

BLAST of IVF0018584.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80450	3.0e-35	46.02	Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=...	[more]
Q9SDW0	2.5e-34	55.22	Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=...	[more]
Q9LU92	6.7e-11	31.07	Trihelix transcription factor GT-4 OS=Arabidopsis thaliana OX=3702 GN=GT-4 PE=2 ...	[more]
Q9FX53	1.7e-09	31.00	Trihelix transcription factor GT-1 OS=Arabidopsis thaliana OX=3702 GN=GT-1 PE=1 ...	[more]
Q39117	1.6e-04	25.00	Trihelix transcription factor GT-2 OS=Arabidopsis thaliana OX=3702 GN=GT-2 PE=1 ...	[more]

BLAST of IVF0018584.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVF8	1.1e-101	98.92	Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CKY0	1.1e-101	98.92	trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3DZE6	2.5e-101	98.39	Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CKZ2	8.0e-100	96.34	trihelix transcription factor GT-3b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KZY4	1.1e-88	92.47	Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G310210 PE...	[more]

BLAST of IVF0018584.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464203.1	9.61e-131	98.92	PREDICTED: trihelix transcription factor GT-3b isoform X2 [Cucumis melo] >KAA005...	[more]
TYK29247.1	2.75e-130	98.39	trihelix transcription factor GT-3b isoform X2 [Cucumis melo var. makuwa]	[more]
XP_008464201.1	3.14e-128	96.34	PREDICTED: trihelix transcription factor GT-3b isoform X1 [Cucumis melo] >XP_008...	[more]
XP_011653700.1	9.55e-114	92.47	trihelix transcription factor GT-3b [Cucumis sativus] >XP_031739717.1 trihelix t...	[more]
XP_038883623.1	6.92e-85	70.77	trihelix transcription factor GT-3b-like [Benincasa hispida]	[more]

BLAST of IVF0018584.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38250.1	2.1e-36	46.02	Homeodomain-like superfamily protein	[more]
AT5G01380.1	1.8e-35	55.22	Homeodomain-like superfamily protein	[more]
AT3G25990.1	4.8e-12	31.07	Homeodomain-like superfamily protein	[more]
AT1G13450.1	1.2e-10	31.00	Homeodomain-like superfamily protein	[more]
AT1G13450.2	1.2e-10	31.00	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 172..186
None	No IPR available	GENE3D	1.10.10.60		coord: 32..93 e-value: 3.4E-17 score: 64.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..172
None	No IPR available	PANTHER	PTHR21654:SF93	SUBFAMILY NOT NAMED	coord: 1..186
None	No IPR available	PANTHER	PTHR21654	FAMILY NOT NAMED	coord: 1..186
None	No IPR available	CDD	cd12203	GT1	coord: 32..95 e-value: 4.83464E-18 score: 72.3127
IPR044822	Myb/SANT-like DNA-binding domain 4	PFAM	PF13837	Myb_DNA-bind_4	coord: 31..114 e-value: 3.7E-18 score: 65.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 31..88 score: 7.073359

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0018584	IVF0018584	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0018584.1-exon	IVF0018584.1-exon-chr08:26100318..26100439	exon
IVF0018584.1-exon	IVF0018584.1-exon-chr08:26100594..26101113	exon
IVF0018584.1-exon	IVF0018584.1-exon-chr08:26102511..26102786	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0018584.1-three_prime_utr	IVF0018584.1-three_prime_utr-chr08:26100318..26100439	three_prime_UTR
IVF0018584.1-three_prime_utr	IVF0018584.1-three_prime_utr-chr08:26100594..26100828	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0018584.1-cds	IVF0018584.1-cds-chr08:26100829..26101113	CDS
IVF0018584.1-cds	IVF0018584.1-cds-chr08:26102511..26102786	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0018584.1	IVF0018584.1-protein	polypeptide