IVF0017431.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGACCCAACTAATTTCCGGGTCGATGGAGATTCCTAACGGACCTTTGCGCCCCGACGCTACCAATTTTTGAGAGCATTCGGAGTTTGCTTTACAAAGAATTCATTCCCATTTCCCTCTTTTTCCCTTTCTCTTCTCCTTCGATTACCTATGGCTGCCGCATCTGCCACCGCTATTAATCGGAATCAGGTCAGTGATTTTCAAGTTCTGCGGCCTTTGGTTCACAATTTCTTGCTTAATTCGTCGGGAAATGATTAATAATGGTGTTAATACTTGAATCAGTCGATTGAGTTTTGAGGATGGATTTATTGCTTTAAGCTTGGTTTTGTTGTTTGTACTCATCCTTTGTTTTTAACCAGGTTGATCTATCCGACTTCATTAACTGGTCTGGTGTCGAGTGCCTCAACCAGAATTTTAGCCATACTTTTACAAATGCTCTTAATCAGGTGCTGTTTGTTATTAATTTGACTTGAGTTGTTTATTAGTTGCACTTACTTCATTGCAATTGTCTTGAGTTTCTTTACATGGTTTAGTAATTAATTTCTTGATTTAATGAAGTTGAAGATGGTGCTGAGTTAGACTTGTGTTGTTGCAGATTGCAATTTATTTATCTCTTTCTTTCTTTCTGATTGCAAATCCTTTTTATGTTTAATATCTTCTTGAAAAGCTTTATGCGAGAATGGTATAGAGGAGGGAGTGGGGTTTACATTTGCTGTGATGGGAAGTTGGAGGTTGGGATAGGTATATGGAAGTTGGCGAATGTGTTATGAACCAAGTTGGTGAATATTTCCCTTTGAAAGCAGATGTTGGTCTGGTCATTATTAATTCGTAACTACTACCTTCCCTCTCATGTTTGTTGATTTTTTATTTTCAATTTGGAAGACCTGTTTGTGATATTGGGTTACAAGTTTTGTCATGTCTTTCTCTATTTTTAGCAATACGTGTCGTTGGGTTCTTCAGTCATCTGGCTCTGGCATCTTTTGTTTTTAACTCCTCATCCTCCTCTTTCACTTTGATTTGAGGCTAAAATCTCAAAGAAGATGAAGTTATTGCCTAAATGGTTTCTTTGGGAAGATTAAATGCACACTTTAGACTTTGTTGAAAAGCCGTCATCTATGGTTCTGGGCTGTCAGTGGTGTGTGTTGCATATGAAAGCAATACAAGATAAAGATAGAGATATCACTTTTTCGTGAAACATAGAATTGACTTTTGCATGTGTTTGGAGTCAGTTTGACTACTCCCAAAGATTATTAGAGATGTGGCGAAGGTGCTTGTTAAACTCAGATTTCCATGATAAGAGTCTAAGTCATTGGCAAAAGTTTTGCCAAGTGTGGTTGACTTAGTGGTATTAGCATGACCTTTGTTTCTAGAGGTTTGAACACCTTGCGATTGTTGTATTCAAAATCATTGGCAAAAATTTTCTTTGCTACTTTGTTGAAACCATGGCTTGAAAGAAATGAATTATGTTAATAGTAGTCTTTAGATAGATTTGGAGTTTTAATTTGTCTCTGTTCTGGTGTTCTGGTCTAATGTATTATGGAGTTATTCTTTTTATTTTTATTTTTAATTCTTAACCTATTGTAATTTTGTTTTTAGATTGCTTATTTTTTTGGATCTATATTTTAGGCCACTTCTTTTGTTTTAAAGATTTATCAATAGTATGAGAACTAAATTCCTATATCTTAAGGTACAAGGTCTAAAATAAAACAAGTCTCAAAGTAGAGGATCCTGAATGATATTATAACCTAAAAGAAAATCTTCATGATAAAACAGTCCCTTTTTCCTCTTAATTTCTTCCCAACAGCCAAGGGAAATTATTATACCAACGGTTTGAATCAACCTTTTTCCTACATTAGACTTGTAGGGATAATGACAGCTTGCTTTTGGAGAGTGATGCAGATGAGCAGCTCTTGATATACATACCTTTTAACCAAGTCGTTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGTTAGTACTCTACACCACTTATTACTTCTAATCCATGGTTTTTTTTCTTCTGAATCTTTCATCACTGCTTGGCATGTGTAATTAGACGTAACATGTCTTACAAATCCGACGTGGGCAATGAGAGTGTGATAATTCCATCTCAAATTTTTACTATTTGATTATTGTTATTTTGGGTTATTCACTCACTGCCCCTTGTTCCTCAACCTCGAGTTTGAAAGTGGATTGTTGTGCTTTCTTGTTTTTCTATCAAAACATTTGTAATTATCTTGTCTTTAATCAGTCAATTGCTAAGTTCTCTTTTTCTAGTAATTCTTGGCTGTTGGAAGATGTCTAATTCTAATTCTGCCTGCCCCTTAGTTACGTTTGTACCTCTGTTATCTTTCTATTCAAACAAATATATTGCAATCTCTCTTTTTAAATGGAAAAAATGTATTGCCATGGAATGGTGCAATCACTCAACCAGGAACGTACATATTGTCTTTCACCTTTCTCCTTTTTTCTGCTTAATTATCAAATCACAGGATTCTAATTTTGAGGTTGTTCCCCAGGTCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGGTAAACTAATTGTTTTCTTTAGTTAATATTTGGTGCAAATGTTTTCTAAATATTATCGGTCGATGATTGTTTGTTTCATGAATGTTGCAGCAACGTCAATGACTACCCTCCCAGTGACACAATCGTGTTGTCCCCAGATAATCTTACGGTAGATTTTCCCATACTTCAATCTGTATCTCATCAATAAATAAAAAATTCTTTCGGGGAGAATATACTAATGAATGAGGAGATCATTGTTTTATTGTTATGGTAGGGAAAGCCAGAGGTTGTGAAGTACGTGAAATTTCAAAATGTTCGTAGGTAAGTCATTTTTGTCCTCAATGTTAATTTCTTCATTCAAACCAGATGTTGAAAGTATTGGTTGATTGTTCTAAATAATTTACATTTTCTTTTATCAGCTTGACAATTTTTATAGAGGATAACCAATCTGGAACCGACACTACAAAAATTCAAAAGATTGCCTTGTATGGAACAACGTAAGTTGTTATTAACATCATATTCCATTTGAGTTAAATTTTTATCGTCTATTTTTTCTTTGCTATGTTTTGATTGAATTACTCCTACATTGTGCACCCAACAACATAGTTGATGTGAGGTTATATTTTAGTTACCTTGACTAATAACTGAGTGATACATATGAACTTACAACAAAAAAAAGGGGAGAAATTTCAAGGAAAATAACAGGATGCCTAATCCATTTAGGAAACTTAGACTATCTTTGTAAATTTCATGCTAGAGATTCGCTGCTTTCAATCACCCTTACTTGATTTTGCCTACCAGATATTTTAAACCTCTTCTCTTTTTTTTTTGATTATTTAATTAGCATACACATTTCTTATAAGCAACGGTTTATGTATTTATTTCATTATTTCTTTATGTTTTGTGAAACGTTGAAATTGTTGATTTGTTCATGCAGCGTTGAAACAACCGACATGAAGGGTCTGAAGAAGATCGAGGATCACTAAATGCAGAAACCATGGTCTGTCTCACACATCTCATATGATTACGAGTAATTGATATCAAAGTTCAGTTTTCCGCAACGATAAGAAAGAACTATATAATGGCTTTTTGATGTCATATTCTGGAATTTTGATGAGTTTGTTATACCTGTTTGATCGGGGGCGATGTGTAGTTCATTCAAAATATATCCACACTTATGCACATTGTTAGGTAGTTTACAAAGGAGGATTAATGCTGATAATTTCACCTAACTATTAGGGCTGCTTGATCAATGGTTGAGATTGGCCATTTTAAAAGAATGCAAGGGGGTGTTTGTTTATGTAATTTGTGCTGATTAGATGTATTATTTGTTCTCAATAAGGTTGGTTGATGAATGACCCTTTAATATCATCCCATGTGAAGTTTCATGGACCATTGAATTAATGACTATTTGTTTCAACCCAACGTTTGTAAGTGTAGGAA GTTTGACCCAACTAATTTCCGGGTCGATGGAGATTCCTAACGGACCTTTGCGCCCCGACGCTACCAATTTTTGAGAGCATTCGGAGTTTGCTTTACAAAGAATTCATTCCCATTTCCCTCTTTTTCCCTTTCTCTTCTCCTTCGATTACCTATGGCTGCCGCATCTGCCACCGCTATTAATCGGAATCAGGTTGATCTATCCGACTTCATTAACTGGTCTGGTGTCGAGTGCCTCAACCAGAATTTTAGCCATACTTTTACAAATGCTCTTAATCAGACTTGTAGGGATAATGACAGCTTGCTTTTGGAGAGTGATGCAGATGAGCAGCTCTTGATATACATACCTTTTAACCAAGTCGTTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGTCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGCAACGTCAATGACTACCCTCCCAGTGACACAATCGTGTTGTCCCCAGATAATCTTACGGGAAAGCCAGAGGTTGTGAAGTACGTGAAATTTCAAAATGTTCGTAGCTTGACAATTTTTATAGAGGATAACCAATCTGGAACCGACACTACAAAAATTCAAAAGATTGCCTTGTATGGAACAACCGTTGAAACAACCGACATGAAGGGTCTGAAGAAGATCGAGGATCACTAAATGCAGAAACCATGGTCTGTCTCACACATCTCATATGATTACGAGTAATTGATATCAAAGTTCAGTTTTCCGCAACGATAAGAAAGAACTATATAATGGCTTTTTGATGTCATATTCTGGAATTTTGATGAGTTTGTTATACCTGTTTGATCGGGGGCGATGTGTAGTTCATTCAAAATATATCCACACTTATGCACATTGTTAGGTAGTTTACAAAGGAGGATTAATGCTGATAATTTCACCTAACTATTAGGGCTGCTTGATCAATGGTTGAGATTGGCCATTTTAAAAGAATGCAAGGGGGTGTTTGTTTATGTAATTTGTGCTGATTAGATGTATTATTTGTTCTCAATAAGGTTGGTTGATGAATGACCCTTTAATATCATCCCATGTGAAGTTTCATGGACCATTGAATTAATGACTATTTGTTTCAACCCAACGTTTGTAAGTGTAGGAA ATGGCTGCCGCATCTGCCACCGCTATTAATCGGAATCAGGTTGATCTATCCGACTTCATTAACTGGTCTGGTGTCGAGTGCCTCAACCAGAATTTTAGCCATACTTTTACAAATGCTCTTAATCAGACTTGTAGGGATAATGACAGCTTGCTTTTGGAGAGTGATGCAGATGAGCAGCTCTTGATATACATACCTTTTAACCAAGTCGTTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGTCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGCAACGTCAATGACTACCCTCCCAGTGACACAATCGTGTTGTCCCCAGATAATCTTACGGGAAAGCCAGAGGTTGTGAAGTACGTGAAATTTCAAAATGTTCGTAGCTTGACAATTTTTATAGAGGATAACCAATCTGGAACCGACACTACAAAAATTCAAAAGATTGCCTTGTATGGAACAACCGTTGAAACAACCGACATGAAGGGTCTGAAGAAGATCGAGGATCACTAA MAAASATAINRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH Homology
BLAST of IVF0017431.1 vs. ExPASy Swiss-Prot
Match: Q9SQZ9 (PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g04780 PE=1 SV=2) HSP 1 Score: 266.2 bits (679), Expect = 2.7e-70 Identity = 131/176 (74.43%), Postives = 151/176 (85.80%), Query Frame = 0
BLAST of IVF0017431.1 vs. ExPASy Swiss-Prot
Match: O43396 (Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3) HSP 1 Score: 123.6 bits (309), Expect = 2.2e-27 Identity = 70/170 (41.18%), Postives = 101/170 (59.41%), Query Frame = 0
BLAST of IVF0017431.1 vs. ExPASy Swiss-Prot
Match: Q920J4 (Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3) HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26 Identity = 69/170 (40.59%), Postives = 100/170 (58.82%), Query Frame = 0
BLAST of IVF0017431.1 vs. ExPASy Swiss-Prot
Match: Q8CDN6 (Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3) HSP 1 Score: 120.6 bits (301), Expect = 1.8e-26 Identity = 68/168 (40.48%), Postives = 99/168 (58.93%), Query Frame = 0
BLAST of IVF0017431.1 vs. ExPASy Swiss-Prot
Match: Q9USR1 (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=txl1 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.1e-22 Identity = 67/178 (37.64%), Postives = 97/178 (54.49%), Query Frame = 0
BLAST of IVF0017431.1 vs. ExPASy TrEMBL
Match: A0A5D3D4D2 (PITH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001340 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 2.1e-94 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0017431.1 vs. ExPASy TrEMBL
Match: A0A1S3C1X8 (PITH domain-containing protein At3g04780 OS=Cucumis melo OX=3656 GN=LOC103495923 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 2.1e-94 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0017431.1 vs. ExPASy TrEMBL
Match: A0A6J1KJE4 (PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC111493734 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92 Identity = 171/176 (97.16%), Postives = 174/176 (98.86%), Query Frame = 0
BLAST of IVF0017431.1 vs. ExPASy TrEMBL
Match: A0A6J1G4V6 (PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=LOC111450832 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92 Identity = 171/176 (97.16%), Postives = 174/176 (98.86%), Query Frame = 0
BLAST of IVF0017431.1 vs. ExPASy TrEMBL
Match: A0A6J1FBX4 (PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=LOC111444016 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 9.9e-92 Identity = 168/176 (95.45%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of IVF0017431.1 vs. NCBI nr
Match: XP_008455826.1 (PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo] >KAA0063617.1 PITH domain-containing protein [Cucumis melo var. makuwa] >TYK18409.1 PITH domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 352 bits (903), Expect = 2.38e-122 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of IVF0017431.1 vs. NCBI nr
Match: XP_038891254.1 (PITH domain-containing protein At3g04780 [Benincasa hispida]) HSP 1 Score: 346 bits (888), Expect = 4.62e-120 Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = 0
BLAST of IVF0017431.1 vs. NCBI nr
Match: XP_022946891.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946892.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946893.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022999328.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_022999329.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_023521729.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023521946.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545536.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545537.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545538.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >KAG6599300.1 PITH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030300.1 PITH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 345 bits (886), Expect = 9.33e-120 Identity = 171/176 (97.16%), Postives = 174/176 (98.86%), Query Frame = 0
BLAST of IVF0017431.1 vs. NCBI nr
Match: XP_022937687.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_023521129.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023537940.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 343 bits (880), Expect = 7.67e-119 Identity = 168/176 (95.45%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of IVF0017431.1 vs. NCBI nr
Match: XP_004139228.2 (PITH domain-containing protein At3g04780 [Cucumis sativus] >KGN60819.1 hypothetical protein Csa_019476 [Cucumis sativus]) HSP 1 Score: 343 bits (879), Expect = 1.50e-118 Identity = 171/175 (97.71%), Postives = 173/175 (98.86%), Query Frame = 0
BLAST of IVF0017431.1 vs. TAIR 10
Match: AT3G04780.1 (Protein of unknown function (DUF1000) ) HSP 1 Score: 266.2 bits (679), Expect = 1.9e-71 Identity = 131/176 (74.43%), Postives = 151/176 (85.80%), Query Frame = 0
BLAST of IVF0017431.1 vs. TAIR 10
Match: AT2G25950.1 (Protein of unknown function (DUF1000) ) HSP 1 Score: 62.0 bits (149), Expect = 5.5e-10 Identity = 46/154 (29.87%), Postives = 79/154 (51.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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