IVF0015290.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0015290.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	F-box/LRR-repeat protein
Location	chr12: 25219646 .. 25220767 (-)
Sequence length	1005
RNA-Seq Expression	IVF0015290.2
Synteny	IVF0015290.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATAACATAATAGATTCAGAGCTTCCATCCGATATTCTTCTCCAAATATTGTTGTTGCTTCAACCATTTTCCAAATTATTCACTTGCAGGCTAGTGAGTAAAAATTGGAACAAATGCATTTCAAGTTTTAAGTTTGATTCCAACCTTTTCATTACCCAAATTTCTCGTTGTCGTAGACGTAGTCGTAATCGCCTTCACTGTGTGGATTTGAATCCTAACCGTTCGGAAGGGGTGAATCTTGTTGGGTCATTTAAGTTGCATCCTTCATGGTCCTCCTCCTCTACTGGAATTGTCAATATTTGTAATGGACTTCTTTGTATCTTGAATGGCAAACGTGTTGCAATACTAAATCCTATGACAAATGAGTACATGGAGCTTCCGAGTAGGACCGAATATCAGTCGTCCGTCTATGGACTTGGTTATAGTCCTAAGACAAAGCAGTACAAGTAGCAAGACATTCGTTCAAAAATGATGAGTTGTTTGTAGAGATTTTAGCATTTGACACAAGTTTGGCGGATCAAGATGGGAATCAGAATGAGGTTCAAAGTCAGTGGAGACACGTAGTTAGCATAAGTACAACCTATAAAATGCATCGCCATGGTACTTACTTTAATGGAGCCATCTATTGGGTTGGAGAAGGAGAGAGGTCTGATTCATCGGCCAAAAATGTGTATGTGTTGTGGCGTTTGAATGTAACAAATGAGAAATTTGAAGAACTTTGGCTTCCTGAAATTGGATCTATTTGGAAACATACTTCTTATTGTGGAGTGTTAATGGAAAATTGTATCTAAGTCATTACGTGACGGCGGATTCTATGTATCATGTGTTGATGATGAATGGAAAAGGCTTGTGGGAGACACCATTTTTTATTAGCATACCAAGGTTTTACAAAGGTTCGACACGTCTTGAGTCCAATCACTTTCAACTAATCAAACCTTGGAAGAAGGAAAGATTTTGTGTCTTTTCTACTCGTTTCTTTTAGTCTTGTTTGATACCAAGAGTGGGAAGTTGGAGAAACTGGATTATGTCGAGGAGGAAGTTAAGAAATCTTTTCGCATTTGTCATATGGACTCCATCCATTTTGGTTCTCTCCCCAACATTTTGGCAGGGAAGTAG

mRNA sequence

ATGGGGAATAACATAATAGATTCAGAGCTTCCATCCGATATTCTTCTCCAAATATTGTTGTTGCTTCAACCATTTTCCAAATTATTCACTTGCAGGCTAGTGAGTAAAAATTGGAACAAATGCATTTCAAGTTTTAAGTTTGATTCCAACCTTTTCATTACCCAAATTTCTCGTTGTCGTAGACGTAGTCGTAATCGCCTTCACTGTGTGGATTTGAATCCTAACCGTTCGGAAGGGGTGAATCTTGTTGGGTCATTTAAGTTGCATCCTTCATGGTCCTCCTCCTCTACTGGAATTGTCAATATTTGTAATGGACTTCTTTGTATCTTGAATGGCAAACGTGTTGCAATACTAAATCCTATGACAAATGAGTACATGGAGCTTCCGAGTAGGACCGAATATCAGTCGTCCGTCTATGGACTTGTAGCAAGACATTCGTTCAAAAATGATGAGTTGTTTGTAGAGATTTTAGCATTTGACACAAGTTTGGCGGATCAAGATGGGAATCAGAATGAGGTTCAAAGTCAGTGGAGACACGTAGTTAGCATAAGTACAACCTATAAAATGCATCGCCATGGTACTTACTTTAATGGAGCCATCTATTGGGTTGGAGAAGGAGAGAGGTCTGATTCATCGGCCAAAAATGTGTATGTGTTGTGGCGTTTGAATGTAACAAATGAGAAATTTGAAGAACTTTGTGTTAATGGAAAATTGTATCTAAGTCATTACGTGACGGCGGATTCTATGTATCATGTGTTGATGATGAATGGAAAAGGCTTGTGGGAGACACCATTTTTTATTAGCATACCAAGGTTTTACAAAGGTTCGACACAAGGAAAGATTTTGTGTCTTTTCTACTCGTTTCTTTTAGTCTTGTTTGATACCAAGAGTGGGAAGTTGGAGAAACTGGATTATGTCGAGGAGGAAGTTAAGAAATCTTTTCGCATTTGTCATATGGACTCCATCCATTTTGGTTCTCTCCCCAACATTTTGGCAGGGAAGTAG

Coding sequence (CDS)

ATGGGGAATAACATAATAGATTCAGAGCTTCCATCCGATATTCTTCTCCAAATATTGTTGTTGCTTCAACCATTTTCCAAATTATTCACTTGCAGGCTAGTGAGTAAAAATTGGAACAAATGCATTTCAAGTTTTAAGTTTGATTCCAACCTTTTCATTACCCAAATTTCTCGTTGTCGTAGACGTAGTCGTAATCGCCTTCACTGTGTGGATTTGAATCCTAACCGTTCGGAAGGGGTGAATCTTGTTGGGTCATTTAAGTTGCATCCTTCATGGTCCTCCTCCTCTACTGGAATTGTCAATATTTGTAATGGACTTCTTTGTATCTTGAATGGCAAACGTGTTGCAATACTAAATCCTATGACAAATGAGTACATGGAGCTTCCGAGTAGGACCGAATATCAGTCGTCCGTCTATGGACTTGTAGCAAGACATTCGTTCAAAAATGATGAGTTGTTTGTAGAGATTTTAGCATTTGACACAAGTTTGGCGGATCAAGATGGGAATCAGAATGAGGTTCAAAGTCAGTGGAGACACGTAGTTAGCATAAGTACAACCTATAAAATGCATCGCCATGGTACTTACTTTAATGGAGCCATCTATTGGGTTGGAGAAGGAGAGAGGTCTGATTCATCGGCCAAAAATGTGTATGTGTTGTGGCGTTTGAATGTAACAAATGAGAAATTTGAAGAACTTTGTGTTAATGGAAAATTGTATCTAAGTCATTACGTGACGGCGGATTCTATGTATCATGTGTTGATGATGAATGGAAAAGGCTTGTGGGAGACACCATTTTTTATTAGCATACCAAGGTTTTACAAAGGTTCGACACAAGGAAAGATTTTGTGTCTTTTCTACTCGTTTCTTTTAGTCTTGTTTGATACCAAGAGTGGGAAGTTGGAGAAACTGGATTATGTCGAGGAGGAAGTTAAGAAATCTTTTCGCATTTGTCATATGGACTCCATCCATTTTGGTTCTCTCCCCAACATTTTGGCAGGGAAGTAG

Protein sequence

MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGLVARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEELCVNGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYKGSTQGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK

Homology

[Close]

BLAST of IVF0015290.2 vs. ExPASy Swiss-Prot
Match: Q9FT50 (Putative F-box protein At3g52320 OS=Arabidopsis thaliana OX=3702 GN=At3g52320 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.6e-05
Identity = 57/237 (24.05%), Postives = 99/237 (41.77%), Query Frame = 0


Query: 9   ELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRC--------R 68
           E+P ++L+ IL+ L P   L   + VSK W   I+S  F +  F      C         
Sbjct: 26  EIPEEMLIDILIRL-PAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPSCLFAYLVDRE 85

Query: 69  RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP 128
            +S+  L     +         V     H +       +VN   GLLC   G+RV + NP
Sbjct: 86  NQSKYLLLQSSSSSRHDHSDTSVSVIDQHSTIPIMGGYLVNAARGLLCYRTGRRVKVCNP 145

Query: 129 MTNEYMELPSRTEYQSSVYGLVARHSFKND----ELFVEILAFDTSL-ADQDGNQNEVQS 188
            T + +ELP     +++V+       F ++     LF E+    T + ++       V +
Sbjct: 146 STRQIVELPIMRS-KTNVWNWFGHDPFHDEYKVLSLFWEVTKEQTVVRSEHQVLVLGVGA 205

Query: 189 QWRHVVSISTTYK---MHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKF 230
            WR+  S  T ++    +  G   +G +Y+     R+D+   N  VL   ++++E+F
Sbjct: 206 SWRNTKSHHTPHRPFHPYSRGMTIDGVLYY---SARTDA---NRCVLMSFDLSSEEF 254

[Close]

BLAST of IVF0015290.2 vs. ExPASy TrEMBL
Match: A0A5D3BIH1 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001140 PE=4 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 3.6e-183
Identity = 331/374 (88.50%), Postives = 333/374 (89.04%), Query Frame = 0


Query: 1   MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCR 60
           MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCR
Sbjct: 1   MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCR 60

Query: 61  RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP 120
           RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP
Sbjct: 61  RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP 120

Query: 121 MTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQ 180
           MTNEYMELPSRTEYQSSVYGL          VARHSFKNDELFVEILAFDTSLADQDGNQ
Sbjct: 121 MTNEYMELPSRTEYQSSVYGLGYSPKTKQYKVARHSFKNDELFVEILAFDTSLADQDGNQ 180

Query: 181 NEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFE 240
           NEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFE
Sbjct: 181 NEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFE 240

Query: 241 ELCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK 300
           EL +                NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK
Sbjct: 241 ELWLPEIGSIWKHTSYCGVFNGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK 300

Query: 301 GST--------------QGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMD 335
           GST              +GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMD
Sbjct: 301 GSTRLESNHFQLIKPWKKGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMD 360

[Close]

BLAST of IVF0015290.2 vs. ExPASy TrEMBL
Match: A0A1S3BGK6 (F-box/LRR-repeat protein At2g43260-like OS=Cucumis melo OX=3656 GN=LOC103489611 PE=4 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 3.6e-183
Identity = 331/374 (88.50%), Postives = 333/374 (89.04%), Query Frame = 0


Query: 1   MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCR 60
           MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCR
Sbjct: 4   MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCR 63

Query: 61  RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP 120
           RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP
Sbjct: 64  RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP 123

Query: 121 MTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQ 180
           MTNEYMELPSRTEYQSSVYGL          VARHSFKNDELFVEILAFDTSLADQDGNQ
Sbjct: 124 MTNEYMELPSRTEYQSSVYGLGYSPKTKQYKVARHSFKNDELFVEILAFDTSLADQDGNQ 183

Query: 181 NEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFE 240
           NEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFE
Sbjct: 184 NEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFE 243

Query: 241 ELCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK 300
           EL +                NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK
Sbjct: 244 ELWLPEIGSIWKHTSYCGVFNGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK 303

Query: 301 GST--------------QGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMD 335
           GST              +GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMD
Sbjct: 304 GSTRLESNHFQLIKPWKKGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMD 363

[Close]

BLAST of IVF0015290.2 vs. ExPASy TrEMBL
Match: A0A0A0LQ77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038970 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 1.4e-89
Identity = 187/312 (59.94%), Postives = 207/312 (66.35%), Query Frame = 0


Query: 62  RSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNPM 121
           R+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGIVN CNG LCILN KRVA+LNPM
Sbjct: 162 RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPM 221

Query: 122 TNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQN 181
           TNEYMELPS T+Y+ SVYGL          V RHS+KN EL VEILAF TSL DQDG   
Sbjct: 222 TNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG--- 281

Query: 182 EVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEE 241
           +VQSQWR V S+STTYKM+RH                                 NEKFEE
Sbjct: 282 KVQSQWRQVASMSTTYKMYRH--------------------------------ANEKFEE 341

Query: 242 LCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYKG 301
           L +                NGKLY+SHYVTADS YHVLMMNGKGLWE PFFI+IPRFYKG
Sbjct: 342 LWLPETGAIWKHTSYCGVFNGKLYISHYVTADSKYHVLMMNGKGLWELPFFINIPRFYKG 401

Query: 302 STQ--------------GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDS 334
           ST+              GKILCLFYSFLLVL+DTK+ KLEKL  V+  VK+SFRIC MDS
Sbjct: 402 STRLDSYHFQLIKPWKDGKILCLFYSFLLVLYDTKTRKLEKLHQVKGIVKRSFRICQMDS 438

[Close]

BLAST of IVF0015290.2 vs. ExPASy TrEMBL
Match: A0A5D3CM94 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006720 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-44
Identity = 139/387 (35.92%), Postives = 187/387 (48.32%), Query Frame = 0


Query: 7   DSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNR 66
           +SE P D ++Q++L   P   L +CRLV K+WN  + + KFD +LFI+    C  R+   
Sbjct: 14  NSEFPPDNIIQVILSKVPLFNLTSCRLVCKSWNNLVLTCKFDPSLFISLAYDCPSRT--- 73

Query: 67  LHCVDLNPNRSEGVNLVGSFKLHP--SWSSSSTGIVNICNGLLCILNGKR--------VA 126
           L+CVD +P  SEG+N VGSF  HP  S SSSS  I+N CNGLL +L  KR        + 
Sbjct: 74  LYCVDFDPMYSEGMNSVGSFSFHPKFSTSSSSISIINACNGLLSLLISKRKPGSVSYVLG 133

Query: 127 ILNPMTNEYMELPSRTEYQSSV------YGL----------VARHSFKNDE--LFVEILA 186
           ILNPMTNEY + P+              YGL          +AR SF+ DE    VEI A
Sbjct: 134 ILNPMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDESTTLVEIFA 193

Query: 187 FDTSLADQDGNQNEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWV-GEGERSDSSAKNVY 246
           F        G+  +V +     V    +  +  HG YFNG +YWV  + +  DSS   +Y
Sbjct: 194 F--------GSTYQVWTS----VGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSISTIY 253

Query: 247 VLWRLNVTNEKFEEL-------------CVNGKLYLSHYVTADSMYHVLMMNGKGLWETP 306
              RL++ NE  E++               +G LYL+  V+ ++ Y V  M     W   
Sbjct: 254 ---RLDIENENLEKISCPQHLGGHFFFGVFDGTLYLT--VSKNNKYQVWKMKDNFSWIKA 313

Query: 307 FFISIPRF------------------YKGSTQGKILCLFYSFLLVLFDTKSGKLEKLDYV 334
           F IS PR                    K    GKILCL     L+L+D K+   E L   
Sbjct: 314 FVISSPRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQ 373

[Close]

BLAST of IVF0015290.2 vs. ExPASy TrEMBL
Match: A0A1S3B0Q6 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103484583 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.3e-44
Identity = 138/387 (35.66%), Postives = 184/387 (47.55%), Query Frame = 0


Query: 7   DSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNR 66
           +SE P D ++Q++L   P   L +CRLV K+WN  + + KFD +LFI+    C  R+   
Sbjct: 14  NSEFPPDNIIQVILSKVPLFNLTSCRLVCKSWNNLVLTCKFDPSLFISLAYDCPSRT--- 73

Query: 67  LHCVDLNPNRSEGVNLVGSFKLHP--SWSSSSTGIVNICNGLLCILNGKR--------VA 126
           L+CVD +P  SEG+N VGSF  HP  S SSSS  I+N CNGLL +L  KR        + 
Sbjct: 74  LYCVDFDPMYSEGMNSVGSFSFHPKFSTSSSSISIINACNGLLSLLISKRKPGSVSYVLG 133

Query: 127 ILNPMTNEYMELPSRTEYQSSV------YGL----------VARHSFKNDE--LFVEILA 186
           ILNPMTNEY + P+              YGL          +AR SF+ DE    VEI A
Sbjct: 134 ILNPMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDESTTLVEIFA 193

Query: 187 FDTSLADQDGNQNEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWV-GEGERSDSSAKNVY 246
           F             +   W   V    +  +  HG YFNG +YWV  + +  DSS   +Y
Sbjct: 194 F-----------GSIYQVWTS-VGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSISTIY 253

Query: 247 VLWRLNVTNEKFEEL-------------CVNGKLYLSHYVTADSMYHVLMMNGKGLWETP 306
              RL++ NE  E++               +G LYL+  V+ ++ Y V  M     W   
Sbjct: 254 ---RLDIENENLEKISCPQHLGGHFFFGVFDGTLYLT--VSKNNKYQVWKMKDNFSWIKA 313

Query: 307 FFISIPRF------------------YKGSTQGKILCLFYSFLLVLFDTKSGKLEKLDYV 334
           F IS PR                    K    GKILCL     L+L+D K+   E L   
Sbjct: 314 FVISSPRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQ 373

[Close]

BLAST of IVF0015290.2 vs. NCBI nr
Match: TYJ98917.1 (F-box/LRR-repeat protein [Cucumis melo var. makuwa])

HSP 1 Score: 645 bits (1665), Expect = 1.39e-232
Identity = 331/374 (88.50%), Postives = 333/374 (89.04%), Query Frame = 0


Query: 1   MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCR 60
           MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCR
Sbjct: 1   MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCR 60

Query: 61  RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP 120
           RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP
Sbjct: 61  RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP 120

Query: 121 MTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQ 180
           MTNEYMELPSRTEYQSSVYGL          VARHSFKNDELFVEILAFDTSLADQDGNQ
Sbjct: 121 MTNEYMELPSRTEYQSSVYGLGYSPKTKQYKVARHSFKNDELFVEILAFDTSLADQDGNQ 180

Query: 181 NEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFE 240
           NEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFE
Sbjct: 181 NEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFE 240

Query: 241 ELCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK 300
           EL +                NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK
Sbjct: 241 ELWLPEIGSIWKHTSYCGVFNGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK 300

Query: 301 GSTQ--------------GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMD 334
           GST+              GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMD
Sbjct: 301 GSTRLESNHFQLIKPWKKGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMD 360

[Close]

BLAST of IVF0015290.2 vs. NCBI nr
Match: XP_008447090.1 (PREDICTED: F-box/LRR-repeat protein At2g43260-like [Cucumis melo])

HSP 1 Score: 645 bits (1665), Expect = 1.55e-232
Identity = 331/374 (88.50%), Postives = 333/374 (89.04%), Query Frame = 0


Query: 1   MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCR 60
           MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCR
Sbjct: 4   MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCR 63

Query: 61  RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP 120
           RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP
Sbjct: 64  RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP 123

Query: 121 MTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQ 180
           MTNEYMELPSRTEYQSSVYGL          VARHSFKNDELFVEILAFDTSLADQDGNQ
Sbjct: 124 MTNEYMELPSRTEYQSSVYGLGYSPKTKQYKVARHSFKNDELFVEILAFDTSLADQDGNQ 183

Query: 181 NEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFE 240
           NEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFE
Sbjct: 184 NEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFE 243

Query: 241 ELCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK 300
           EL +                NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK
Sbjct: 244 ELWLPEIGSIWKHTSYCGVFNGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK 303

Query: 301 GSTQ--------------GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMD 334
           GST+              GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMD
Sbjct: 304 GSTRLESNHFQLIKPWKKGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMD 363

[Close]

BLAST of IVF0015290.2 vs. NCBI nr
Match: KGN64030.1 (hypothetical protein Csa_013491 [Cucumis sativus])

HSP 1 Score: 337 bits (865), Expect = 4.68e-110
Identity = 187/313 (59.74%), Postives = 207/313 (66.13%), Query Frame = 0


Query: 62  RSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNPM 121
           R+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGIVN CNG LCILN KRVA+LNPM
Sbjct: 162 RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPM 221

Query: 122 TNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQN 181
           TNEYMELPS T+Y+ SVYGL          V RHS+KN EL VEILAF TSL DQDG   
Sbjct: 222 TNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG--- 281

Query: 182 EVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEE 241
           +VQSQWR V S+STTYKM+RH                                 NEKFEE
Sbjct: 282 KVQSQWRQVASMSTTYKMYRHA--------------------------------NEKFEE 341

Query: 242 LCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYKG 301
           L +                NGKLY+SHYVTADS YHVLMMNGKGLWE PFFI+IPRFYKG
Sbjct: 342 LWLPETGAIWKHTSYCGVFNGKLYISHYVTADSKYHVLMMNGKGLWELPFFINIPRFYKG 401

Query: 302 STQ--------------GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDS 334
           ST+              GKILCLFYSFLLVL+DTK+ KLEKL  V+  VK+SFRIC MDS
Sbjct: 402 STRLDSYHFQLIKPWKDGKILCLFYSFLLVLYDTKTRKLEKLHQVKGIVKRSFRICQMDS 439

[Close]

BLAST of IVF0015290.2 vs. NCBI nr
Match: XP_004137594.1 (F-box protein At5g65850 [Cucumis sativus])

HSP 1 Score: 288 bits (736), Expect = 9.22e-94
Identity = 152/207 (73.43%), Postives = 166/207 (80.19%), Query Frame = 0


Query: 2   GNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQIS--RC 61
             +IIDSELPSDILLQILL LQPFS LFTCRLVSK WN CISSFKF+SNLFITQIS  R 
Sbjct: 7   SKSIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRN 66

Query: 62  RRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILN 121
           RRR+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGIVN CNG LCILN KRVA+LN
Sbjct: 67  RRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLN 126

Query: 122 PMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGN 181
           PMTNEYMELPS T+Y+ SVYGL          V RHS+KN EL VEILAF TSL DQDG 
Sbjct: 127 PMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG- 186

Query: 182 QNEVQSQWRHVVSISTTYKMHRHGTYF 196
             +VQSQWR V S+STTYKM+RHGTYF
Sbjct: 187 --KVQSQWRQVASMSTTYKMYRHGTYF 210

[Close]

BLAST of IVF0015290.2 vs. NCBI nr
Match: TYK13067.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 186 bits (471), Expect = 1.05e-51
Identity = 139/388 (35.82%), Postives = 187/388 (48.20%), Query Frame = 0


Query: 7   DSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNR 66
           +SE P D ++Q++L   P   L +CRLV K+WN  + + KFD +LFI+    C  R+   
Sbjct: 14  NSEFPPDNIIQVILSKVPLFNLTSCRLVCKSWNNLVLTCKFDPSLFISLAYDCPSRT--- 73

Query: 67  LHCVDLNPNRSEGVNLVGSFKLHP--SWSSSSTGIVNICNGLLCILNGKR--------VA 126
           L+CVD +P  SEG+N VGSF  HP  S SSSS  I+N CNGLL +L  KR        + 
Sbjct: 74  LYCVDFDPMYSEGMNSVGSFSFHPKFSTSSSSISIINACNGLLSLLISKRKPGSVSYVLG 133

Query: 127 ILNPMTNEYMELPSRTEYQSSV------YGL----------VARHSFKNDE--LFVEILA 186
           ILNPMTNEY + P+              YGL          +AR SF+ DE    VEI A
Sbjct: 134 ILNPMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDESTTLVEIFA 193

Query: 187 FDTSLADQDGNQNEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVG-EGERSDSSAKNVY 246
           F        G+  +V +     V    +  +  HG YFNG +YWV  + +  DSS   +Y
Sbjct: 194 F--------GSTYQVWTS----VGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSISTIY 253

Query: 247 VLWRLNVTNEKFEELCV-------------NGKLYLSHYVTADSMYHVLMMNGKGLWETP 306
              RL++ NE  E++               +G LYL+  V+ ++ Y V  M     W   
Sbjct: 254 ---RLDIENENLEKISCPQHLGGHFFFGVFDGTLYLT--VSKNNKYQVWKMKDNFSWIKA 313

Query: 307 FFISIPRFY------------------KGSTQGKILCLFYSFLLVLFDTKSGKLEKLDYV 334
           F IS PR                    K    GKILCL     L+L+D K+   E L   
Sbjct: 314 FVISSPRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQ 373

[Close]

BLAST of IVF0015290.2 vs. TAIR 10
Match: AT3G52320.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.8e-06
Identity = 57/237 (24.05%), Postives = 99/237 (41.77%), Query Frame = 0


Query: 9   ELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRC--------R 68
           E+P ++L+ IL+ L P   L   + VSK W   I+S  F +  F      C         
Sbjct: 26  EIPEEMLIDILIRL-PAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPSCLFAYLVDRE 85

Query: 69  RRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNP 128
            +S+  L     +         V     H +       +VN   GLLC   G+RV + NP
Sbjct: 86  NQSKYLLLQSSSSSRHDHSDTSVSVIDQHSTIPIMGGYLVNAARGLLCYRTGRRVKVCNP 145

Query: 129 MTNEYMELPSRTEYQSSVYGLVARHSFKND----ELFVEILAFDTSL-ADQDGNQNEVQS 188
            T + +ELP     +++V+       F ++     LF E+    T + ++       V +
Sbjct: 146 STRQIVELPIMRS-KTNVWNWFGHDPFHDEYKVLSLFWEVTKEQTVVRSEHQVLVLGVGA 205

Query: 189 QWRHVVSISTTYK---MHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKF 230
            WR+  S  T ++    +  G   +G +Y+     R+D+   N  VL   ++++E+F
Sbjct: 206 SWRNTKSHHTPHRPFHPYSRGMTIDGVLYY---SARTDA---NRCVLMSFDLSSEEF 254

The following BLAST results are available for this feature:

BLAST of IVF0015290.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FT50	2.6e-05	24.05	Putative F-box protein At3g52320 OS=Arabidopsis thaliana OX=3702 GN=At3g52320 PE...	[more]

BLAST of IVF0015290.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIH1	3.6e-183	88.50	F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BGK6	3.6e-183	88.50	F-box/LRR-repeat protein At2g43260-like OS=Cucumis melo OX=3656 GN=LOC103489611 ...	[more]
A0A0A0LQ77	1.4e-89	59.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038970 PE=4 SV=1	[more]
A0A5D3CM94	1.7e-44	35.92	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3B0Q6	2.3e-44	35.66	putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103484583 PE=4 SV...	[more]

BLAST of IVF0015290.2 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98917.1	1.39e-232	88.50	F-box/LRR-repeat protein [Cucumis melo var. makuwa]	[more]
XP_008447090.1	1.55e-232	88.50	PREDICTED: F-box/LRR-repeat protein At2g43260-like [Cucumis melo]	[more]
KGN64030.1	4.68e-110	59.74	hypothetical protein Csa_013491 [Cucumis sativus]	[more]
XP_004137594.1	9.22e-94	73.43	F-box protein At5g65850 [Cucumis sativus]	[more]
TYK13067.1	1.05e-51	35.82	putative F-box protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0015290.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52320.1	1.8e-06	24.05	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 10..51 e-value: 2.5E-5 score: 33.7
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 8..50 e-value: 1.5E-8 score: 34.3
None	No IPR available	GENE3D	1.20.1280.50		coord: 3..47 e-value: 1.0E-5 score: 27.2
None	No IPR available	PANTHER	PTHR47993:SF20	F-BOX FAMILY PROTEIN	coord: 18..272
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 18..272
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 102..234 e-value: 4.3E-11 score: 40.5
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 8..54

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0015290	IVF0015290	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0015290.2-exon	IVF0015290.2-exon-chr12:25219646..25219818	exon
IVF0015290.2-exon	IVF0015290.2-exon-chr12:25219860..25219993	exon
IVF0015290.2-exon	IVF0015290.2-exon-chr12:25220041..25220314	exon
IVF0015290.2-exon	IVF0015290.2-exon-chr12:25220344..25220767	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0015290.2-cds	IVF0015290.2-cds-chr12:25219646..25219818	CDS
IVF0015290.2-cds	IVF0015290.2-cds-chr12:25219860..25219993	CDS
IVF0015290.2-cds	IVF0015290.2-cds-chr12:25220041..25220314	CDS
IVF0015290.2-cds	IVF0015290.2-cds-chr12:25220344..25220767	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0015290.2	IVF0015290.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding