IVF0011969.2 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAACCAAAACCCCTCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCCTCTCAGCTTCAGCAATGGCAGCCACTACTACCTCCTCCTTCTAACCCTTCTTCAATCTCACTCCTAATTACTCGACCCCCCCTCCCCTCCCCTCCCCTCCCATCTTCCTTCTTCATGTCTAATTCTGATCATACTAATGGCGTCTCCAATGCCGCCGCCATCGACTCTCACAAGAATCAGTCCTCTTCCAATGGAGCCCTCGCTGTTAAAAAGCCTCCTTCTAAGGATCGTCATAGTAAGGTTGATGGTCGTGGCCGTCGTATCCGTATGCCCATCATCTGCGCTGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAGTCCGACGGTCAAACCATCGAGTGGCTTCTTCGTCAAGCCGAGCCTTCTATTATTGCTGCTACTGGTACTGGTACTACTCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACTACTTCTACTCTTTCCCTCTCACGTCCTCAAGCTCTTTCCGGTCCCACGCCGTTTATTCTTGGCAAGCGTGTTAGGTCCGACGATGATGCTAAAGACGATGGGTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTCCGACCGGGCCAGGTGGGTATTGGGCGATTCCGGCTAGACCCGATTATGGGCAGGTTTGGAGTTTTGCTGCCGCGGCTCCGTCGGAGATGGTGGTTCAACAGGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCTCAACAGCAGCAGCCGATTAGAGAGGCGTCCGCGGCCAGAGTGGGGAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGAGGTGGTTCTGGACGGCGGGAAGATGACCCTCGCTAATTGTTGAAATGGGTTGGGGATATTCTTGTTCTTCTTCATCGTATTTTGTACAAATTATCTGTGTGTCAATTGCTTTCTTGTGTGCAGCTAAGAAAAAAAGGGTTAATTCTAGTGGGAATGTAGGATTCTAGGGTTTCAGTTTGCTTGGAAATCAGAATTCGTAGATCGAATTTCAATTTTCCATGGATGAGTTCGTTCAGATTAGAACTTTAGGGTTTGAAATTGCTAGAAACAAAAATTAGGGTTTTATTTTTCTTCTTCCATCTTATGAGAGTGAGAAGAAGATTCAAGATTCATCGCTGCTGCAAATTGACGATTGATGAACTCGAACAGGGGAAGCAGATTTGTTGAACATTGAATCGGAGCTTCAGTTTTTGGCCGTAATCGGCTTACTTATTGCAGTGACGACGAAACCATTGAAGACCATTCTGAAGCTTCTTCTTCAATGGTCACTACCCTTCGAATTTGAAAAGATGAAGCTCCAATCTCTCACTCTGTAAGACCTCTGTTTTTTCTTCTAAAGAATTCCATTTGTATTCTTAGAATTTGTTGGCTTGACAATAATGGGTGTTTTTTATTATTTTCATTATTATTATTTTTCTTGTTCTTGTTTATGTCAGTGGATTGTTTCTGGGATTTCTCTGATGTGAATAAAAATCCC TTTAACCAAAACCCCTCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCCTCTCAGCTTCAGCAATGGCAGCCACTACTACCTCCTCCTTCTAACCCTTCTTCAATCTCACTCCTAATTACTCGACCCCCCCTCCCCTCCCCTCCCCTCCCATCTTCCTTCTTCATGTCTAATTCTGATCATACTAATGGCGTCTCCAATGCCGCCGCCATCGACTCTCACAAGAATCAGTCCTCTTCCAATGGAGCCCTCGCTGTTAAAAAGCCTCCTTCTAAGGATCGTCATAGTAAGGTTGATGGTCGTGGCCGTCGTATCCGTATGCCCATCATCTGCGCTGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAGTCCGACGGTCAAACCATCGAGTGGCTTCTTCGTCAAGCCGAGCCTTCTATTATTGCTGCTACTGGTACTGGTACTACTCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACTACTTCTACTCTTTCCCTCTCACGTCCTCAAGCTCTTTCCGGTCCCACGCCGTTTATTCTTGGCAAGCGTGTTAGGTCCGACGATGATGCTAAAGACGATGGGTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTCCGACCGGGCCAGGTGGGTATTGGGCGATTCCGGCTAGACCCGATTATGGGCAGGTTTGGAGTTTTGCTGCCGCGGCTCCGTCGGAGATGGTGGTTCAACAGGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCTCAACAGCAGCAGCCGATTAGAGAGGCGTCCGCGGCCAGAGTGGGGAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGAGGTGGTTCTGGACGGCGGGAAGATGACCCTCGCTAATTGTTGAAATGGGTTGGGGATATTCTTGTTCTTCTTCATCGTATTTTGTACAAATTATCTGTGTGTCAATTGCTTTCTTGTGTGCAGCTAAGAAAAAAAGGGTTAATTCTAGTGGGAATGTAGGATTCTAGGGTTTCAGTTTGCTTGGAAATCAGAATTCGTAGATCGAATTTCAATTTTCCATGGATGAGTTCGTTCAGATTAGAACTTTAGGGTTTGAAATTGCTAGAAACAAAAATTAGGGTTTTATTTTTCTTCTTCCATCTTATGAGAGTGAGAAGAAGATTCAAGATTCATCGCTGCTGCAAATTGACGATTGATGAACTCGAACAGGGGAAGCAGATTTGTTGAACATTGAATCGGAGCTTCAGTTTTTGGCCGTAATCGGCTTACTTATTGCAGTGACGACGAAACCATTGAAGACCATTCTGAAGCTTCTTCTTCAATGGTCACTACCCTTCGAATTTGAAAAGATGAAGCTCCAATCTCTCACTCTGTAAGACCTCTGTTTTTTCTTCTAAAGAATTCCATTTGTATTCTTAGAATTTGTTGGCTTGACAATAATGGGTGTTTTTTATTATTTTCATTATTATTATTTTTCTTGTTCTTGTTTATGTCAGTGGATTGTTTCTGGGATTTCTCTGATGTGAATAAAAATCCC ATGTCTAATTCTGATCATACTAATGGCGTCTCCAATGCCGCCGCCATCGACTCTCACAAGAATCAGTCCTCTTCCAATGGAGCCCTCGCTGTTAAAAAGCCTCCTTCTAAGGATCGTCATAGTAAGGTTGATGGTCGTGGCCGTCGTATCCGTATGCCCATCATCTGCGCTGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAGTCCGACGGTCAAACCATCGAGTGGCTTCTTCGTCAAGCCGAGCCTTCTATTATTGCTGCTACTGGTACTGGTACTACTCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACTACTTCTACTCTTTCCCTCTCACGTCCTCAAGCTCTTTCCGGTCCCACGCCGTTTATTCTTGGCAAGCGTGTTAGGTCCGACGATGATGCTAAAGACGATGGGTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTCCGACCGGGCCAGGTGGGTATTGGGCGATTCCGGCTAGACCCGATTATGGGCAGGTTTGGAGTTTTGCTGCCGCGGCTCCGTCGGAGATGGTGGTTCAACAGGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCTCAACAGCAGCAGCCGATTAGAGAGGCGTCCGCGGCCAGAGTGGGGAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGAGGTGGTTCTGGACGGCGGGAAGATGACCCTCGCTAA MSNSDHTNGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDAKDDGLGVGQAVGSIVGPTGPGGYWAIPARPDYGQVWSFAAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGSGRREDDPR Homology
BLAST of IVF0011969.2 vs. ExPASy Swiss-Prot
Match: Q9FMX2 (Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.8e-68 Identity = 158/262 (60.31%), Postives = 187/262 (71.37%), Query Frame = 0
BLAST of IVF0011969.2 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 1.5e-64 Identity = 156/269 (57.99%), Postives = 175/269 (65.06%), Query Frame = 0
BLAST of IVF0011969.2 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 9.5e-32 Identity = 74/118 (62.71%), Postives = 91/118 (77.12%), Query Frame = 0
BLAST of IVF0011969.2 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.2e-30 Identity = 71/111 (63.96%), Postives = 88/111 (79.28%), Query Frame = 0
BLAST of IVF0011969.2 vs. ExPASy Swiss-Prot
Match: Q9LQF0 (Transcription factor TCP23 OS=Arabidopsis thaliana OX=3702 GN=TCP23 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 7.5e-29 Identity = 71/116 (61.21%), Postives = 90/116 (77.59%), Query Frame = 0
BLAST of IVF0011969.2 vs. ExPASy TrEMBL
Match: A0A5A7SY02 (Transcription factor TCP7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00630 PE=4 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 1.8e-134 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of IVF0011969.2 vs. ExPASy TrEMBL
Match: A0A1S3BDR1 (transcription factor TCP7-like OS=Cucumis melo OX=3656 GN=LOC103488772 PE=4 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 1.8e-134 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of IVF0011969.2 vs. ExPASy TrEMBL
Match: A0A0A0KPX7 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175170 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 7.8e-130 Identity = 247/256 (96.48%), Postives = 249/256 (97.27%), Query Frame = 0
BLAST of IVF0011969.2 vs. ExPASy TrEMBL
Match: A0A6J1KJS4 (transcription factor TCP7-like OS=Cucurbita maxima OX=3661 GN=LOC111493818 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 3.1e-118 Identity = 238/259 (91.89%), Postives = 240/259 (92.66%), Query Frame = 0
BLAST of IVF0011969.2 vs. ExPASy TrEMBL
Match: A0A6J1H1R0 (transcription factor TCP7-like OS=Cucurbita moschata OX=3662 GN=LOC111458790 PE=4 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 9.9e-117 Identity = 235/259 (90.73%), Postives = 238/259 (91.89%), Query Frame = 0
BLAST of IVF0011969.2 vs. NCBI nr
Match: XP_008445886.1 (PREDICTED: transcription factor TCP7-like [Cucumis melo] >KAA0034075.1 transcription factor TCP7-like [Cucumis melo var. makuwa]) HSP 1 Score: 489 bits (1260), Expect = 4.06e-174 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of IVF0011969.2 vs. NCBI nr
Match: XP_004143620.1 (transcription factor TCP7 [Cucumis sativus] >KGN50442.1 hypothetical protein Csa_000312 [Cucumis sativus]) HSP 1 Score: 474 bits (1220), Expect = 5.08e-168 Identity = 247/256 (96.48%), Postives = 249/256 (97.27%), Query Frame = 0
BLAST of IVF0011969.2 vs. NCBI nr
Match: XP_038893054.1 (transcription factor TCP7-like [Benincasa hispida]) HSP 1 Score: 457 bits (1177), Expect = 2.18e-161 Identity = 243/261 (93.10%), Postives = 247/261 (94.64%), Query Frame = 0
BLAST of IVF0011969.2 vs. NCBI nr
Match: XP_022999463.1 (transcription factor TCP7-like [Cucurbita maxima]) HSP 1 Score: 435 bits (1119), Expect = 1.01e-152 Identity = 238/259 (91.89%), Postives = 240/259 (92.66%), Query Frame = 0
BLAST of IVF0011969.2 vs. NCBI nr
Match: KAG6601060.1 (Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031871.1 Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 430 bits (1106), Expect = 9.64e-151 Identity = 235/259 (90.73%), Postives = 238/259 (91.89%), Query Frame = 0
BLAST of IVF0011969.2 vs. TAIR 10
Match: AT5G23280.1 (TCP family transcription factor ) HSP 1 Score: 260.0 bits (663), Expect = 2.0e-69 Identity = 158/262 (60.31%), Postives = 187/262 (71.37%), Query Frame = 0
BLAST of IVF0011969.2 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor ) HSP 1 Score: 247.7 bits (631), Expect = 1.0e-65 Identity = 156/269 (57.99%), Postives = 175/269 (65.06%), Query Frame = 0
BLAST of IVF0011969.2 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 ) HSP 1 Score: 138.7 bits (348), Expect = 6.7e-33 Identity = 74/118 (62.71%), Postives = 91/118 (77.12%), Query Frame = 0
BLAST of IVF0011969.2 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor ) HSP 1 Score: 132.9 bits (333), Expect = 3.7e-31 Identity = 71/111 (63.96%), Postives = 88/111 (79.28%), Query Frame = 0
BLAST of IVF0011969.2 vs. TAIR 10
Match: AT1G35560.1 (TCP family transcription factor ) HSP 1 Score: 129.0 bits (323), Expect = 5.3e-30 Identity = 71/116 (61.21%), Postives = 90/116 (77.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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