IVF0011954.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0011954.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr08: 27367638 .. 27367853 (+)
Sequence length	216
RNA-Seq Expression	IVF0011954.2
Synteny	IVF0011954.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAATTAAACGACGTAAAAAAAGAATTAGAAAAGAAGAAAGACGATGGAAAGAAATCGAAGCAAAAAAAAAAAAAGAAAAATAAGAAAGACGATGGAAAATATCGCAGCAGAAAAAAAAAAGAAAAGAAGAAAGGTGATGGAAGAAATCGGAGGAGGAACACCATGAAAGAAATCGCGAGGAAGAGAAGAAAGATGGAAGGGCAAACCTGA

mRNA sequence

ATGGAAAAATTAAACGACGTAAAAAAAGAATTAGAAAAGAAGAAAGACGATGGAAAGAAATCGAAGCAAAAAAAAAAAAAGAAAAATAAGAAAGACGATGGAAAATATCGCAGCAGAAAAAAAAAAGAAAAGAAGAAAGGTGATGGAAGAAATCGGAGGAGGAACACCATGAAAGAAATCGCGAGGAAGAGAAGAAAGATGGAAGGGCAAACCTGA

Coding sequence (CDS)

ATGGAAAAATTAAACGACGTAAAAAAAGAATTAGAAAAGAAGAAAGACGATGGAAAGAAATCGAAGCAAAAAAAAAAAAAGAAAAATAAGAAAGACGATGGAAAATATCGCAGCAGAAAAAAAAAAGAAAAGAAGAAAGGTGATGGAAGAAATCGGAGGAGGAACACCATGAAAGAAATCGCGAGGAAGAGAAGAAAGATGGAAGGGCAAACCTGA

Protein sequence

MEKLNDVKKELEKKKDDGKKSKQKKKKKNKKDDGKYRSRKKKEKKKGDGRNRRRNTMKEIARKRRKMEGQT

Homology

The following BLAST results are available for this feature:

BLAST of IVF0011954.2 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0011954.2 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0011954.2 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0011954.2 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0011954	IVF0011954	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0011954.2-exon	IVF0011954.2-exon-chr08:27367638..27367853	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0011954.2-cds	IVF0011954.2-cds-chr08:27367638..27367853	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0011954.2	IVF0011954.2-protein	polypeptide