IVF0011263.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0011263.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	thioredoxin-like protein Clot
Location	chr04: 23393702 .. 23397909 (-)
Sequence length	874
RNA-Seq Expression	IVF0011263.2
Synteny	IVF0011263.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGAGTTCTCAAAACTCGTCCACTTAAAAAAATGAAAAAAAAAGAAAAGCAGCAGTATTTTGGTAAATTGTTTTAAGATTACATTATTTTTCTAATAAGTTTTAAAAATAGCTGTATTTTAATAAATTATCCGATTGAGGAACCCTAGAAAGTAGTCATTTCATTGGGGATTTCGCTCAAATTCCCACCAAATTCAAACTCTTCTATTTCACTCTCGTCCGCAATCTGAGAAGAAAGAAAATGCCGCTGAAGGTAGTGGACGCCACCCTCTCCGACTTCAATGCTGTATTCGACAAATTCCGATCACAACTGCCAAACAATAAAGCTAATTTCATCCTCTTTCTAGCCGACAAAGATCCTTCCACCTCTCGCAGCTGGTGTCCTGGTATGCTCCATTTCTTTGTTTTTTCCCCCTTTTCCTTTACTTCTGAATAAACTTTGTGGATTCTGTGATTACCCATCTCGTGAGGAAAAGGAAAATCGCAAGTCTTTCGTTATTGCTGTTTTCTTGCATTTTATTGTTCTAATTCTGATTTTGTCATTTCTCCTCGATTGTGATTGCTCGCGTTTTGCTTTTCTTCATATGCGAGTTTCCCTTTTAATATAAAGTAATTAATTTTAAATTTTTTTTGAAGCGTTCAAATTTTCCCAATTGATTGGAGGGGGATAATGTTGTATATGCATGTACGCACACACCATATGCTAAACGAGAGACAAGTTGTGACCATATGCTCAATGGTCTATCTATGAAATTATATTTTTCTTACCGTGCAATGAAAAATATTTGAAGAAATTATTTAGAGAAATGAGTTCTGTGTTTGACTTGTGAGATCTTTTATCTTGGGCCTGATACTGAGAATCAAAATTTGAAGATCTGTAGTGATTCTGCATTCGTCAGTAAGCTAGGAAGATCTTTTCAACTTTGCTTACATTTAGGTTTAAGGATAGAGTACCCAAGATATTAAATTTTTGTAGTTTGGGATTTCTTAGAACATTTCTAGTTCCCACTTCATGTATGATGCAATGTCTAGAAGGAAACATCATAATAGGATTTGGTACATTGCGAGTTTGGATTTAAGAATGCTTATCTTGTACAATTGGTATTAAGTGGCATGTGCAAACTAACTGTCCTACTTTTCTGCTTCGTCAAGAAAAAGGGAGCTTCAGTTCTATCCTTCGAACCAGAAAAAGCATGGTCCATTCAAAGTTGTTTCGAGCTTCTACTTGCCTTCTATTTCTCTCAGTGTTCTTCGCTTCAGTCTACTGTACTTCTGACCCTGAAGACCATCGTCTTATTGTCTCTGAATCAACTACTATACAATTATCTGGTGGCTTGCCTGTGAAAAATTCTCCAGGTTCCAAACCTGGAACTGTGGTGGCTTGTGAAAGAGTATACATCCAAGGATTACCGAGGTTTAAAAATCTTAAGAAGGCTGCACACACAGTGAAAGTAAAGGTTTCATCCCGAAATTCAAGTTTTTGGATGTCAAATGTTGAGGTTTGTTTTCACAGGAATATGTCTCTTGGGATAGGAATGTGTCCTCAGAGTCAGTGGGAGAAAGTTGGCAGAGGTTCTTGGGTCCAATCCATGTCACCGTTTGACCACAAGCTTTTAGATATTAGAACATGTGGGTTATCCTTGGAAAGTTTTGAAGTATCAACTGAAGATGAATTCTTTTTGTATCGCATAATCTTTTTAATCCTGGGTGTGTTGTTAATGAGTTCAGCCTCTATACTGAGCAAGTCGTTGGTATTTTATTATGGCAGCGGTATGGCAATTGGAATTCTCCTTATAGTGTTAATGATCCTTTTTCAGGGGATGAAGCTTCTTCCTACTGGTCGGAAGAGCTCGCTTGTAATTTTTCTATACGCATCTGCAGTTGGTCTTGGATCTTTTTTCATCCGGTACATACCTGGATTATTGTATCAGATACTTATGGAAATGGGTATAAGTGAGGACATGTATAATCCTCTAGCAGCATTTCTGCTGGCTTTTATTTTTCTGATTGGAGCATGGTTGGGCTTTTGGGTAGTCCACAAATTCGTCCTTGACGAGGATGGATCAATCGATACAAGTACATCACTTTTTGTCACATGGTCCATTCGAATTTTGGCTAGTCTTCTTATTCTTCAGTGTTCCTTGGATCCCTTGCTGGCAACAGGAGTTTTAATATGTGGAATAGTGGCTTCATCAATGTTGAGAAAAATCTTTAAGTTCAGATTTCTACGTCGCCTATTCAAAAATTTATTCAAATCTCCAAAGAAAATACCCAAGAGATCTCATATCTCTGATATGCCACGTTGGGATGATTCTGATGATGAATGCACTTTGAAGACTACCCCGCTTTACAAAGAACCCAGGTTCTATAGATCCCAAAATAGAAAATTCTTACTTCAGTCCTGTGATTCTTCTAAACATGGCGATGTATATCCTTCAACGTTCCATTCCACTCCTGAACGGAGAAAATTTTCAAAGGACGAGTGGGAAAAGTTCACCAAGGACTCAACTAAAAAGGCTTTGGAAGGACTAGTTTCTTCACCAGACTTTAGCAGTTGGCTTGTTGATAGAGCAGATAGAATCAGCATAACTCCCCAAAGCTCTAGAGCTGAGAAGCGTCGAAAGTGGCTCCATTGGTTCTGATCAGTTCTAGGTCGATTACAATGCTATAAGATTATGTGACTAAAACATGTGGCTGCCTGCATAGTTATTATGACTTTTCTGGAAAATAGTAGGATGTGTTTAGACAATGGATTACACCCACCAACTTGTATTTCCCTTATATGTTAGATCATTATTCATTACCTAGGTTTAGGGTACTTAGAGACTTGTAAGTTGTGTGATTTGCACGTATTTAGCCATTTAATGGAAGAAGCATGTTAGCACTTCAAAAAGAGGCATTTACAAACTGGCTGGAGCTTAAGGATTTTGTTTCTCAGCTTTTATGTGGTCATTCTCTCCATTTGCTTTATGCAGTAGCCTATGTACTTGAGTATATTGCAGGGAAGGCTATTTGTTTGCTTCTTTTATTTGTTTAATATCTTGTAACTTACAGGCTGTGCCATGATTCTGTGATATTCCCCACCTCAATACCACGCGGCTATGTGAAAACGTTGTTGCTGCATCATTTAACTACCAATAATGGATCACAGAAATCAATGAAACTTATAAAACTTTTATGTTTGTTTCTAATAGGTCTCTTAAGTTTTCAATTTTATTTCAAATAGTTTTCGTTTTTCAAATTTCAACATGAACTTGAAAGTTTGGAGACTAAATGTGTACTTTAACCTTACATGAAGCTGAAAGTTTGGGAACTAAATGTGTAATTATACCTTCTTTATTATAGATAAGTATAATTTTTTATACCTTGGCCATTGTAGAAAAATTATTTAATGTGTGCACTTAAATGTAGCTATAATTTCTAATATTTAGGTGTAGTCAACCATACTACGTTGTTTCTCACATTGTTCTACCTCCTCAAATAGCTTCTGCCACTTCAATTTTGCTAGAAACCATGGATATAAAGAAGTAATACATTTTCCATTACATTGTCTTCTCCCTGATGTCTACAAAATGCTCGACTAGGACTTAGATATTCCTTCCTCAATTTGAGTCTACTTACATCTAGTCAATTAAGAATTCTCGTATTGTATTAGTGGTAGTAAGTACAGAATGCAATCATCAATTCTCTAAAAAGATAGATGTTTGGTTTTTGTGTCAGACTGTGTGAGAGCTGAACCAGTGATCTACAAAAAACTGGAAGCAGCATCAGATGATACTGCACTTTTGAGAGCCTATGTTGGAGATAGACCTACATGGAGGAATCCCCAGCATCCATGGAGAGTGGATTGTAGGTTCAAGCTTACTGGAGTTCCAACGCTGGTTCGATGGGAGGAGAACGATAAGATCAGTGGTCGCCTTGAAGATCATGAAGCTCATGTGGAAAACAAAATTGATGCCCTTATTGCTGGTAAATAATTGTTGGCGTCTGTTCGATAAGACATGGGAAGTACCTTTCCCAACTTAGTATATTCATCGTTTTCTGTTCTTGAGGAACGTTTATGTGACCTCTGATAGATTGGTTGACGATTATATAGTTATCTCATGAATAAAACAACCGGAGAGTTTCAATCACCATTACAAATTTTAGGGGTGAACACTAAAACCGATTGAATTGAATCGAATTGAACGAAAATCCAGTTTTTACTAA

mRNA sequence

GCGAGTTCTCAAAACTCGTCCACTTAAAAAAATGAAAAAAAAAGAAAAGCAGCAGTATTTTGGTAAATTGTTTTAAGATTACATTATTTTTCTAATAAGTTTTAAAAATAGCTGTATTTTAATAAATTATCCGATTGAGGAACCCTAGAAAGTAGTCATTTCATTGGGGATTTCGCTCAAATTCCCACCAAATTCAAACTCTTCTATTTCACTCTCGTCCGCAATCTGAGAAGAAAGAAAATGCCGCTGAAGGTAGTGGACGCCACCCTCTCCGACTTCAATGCTGTATTCGACAAATTCCGATCACAACTGCCAAACAATAAAGCTAATTTCATCCTCTTTCTAGCCGACAAAGATCCTTCCACCTCTCGCAGCTGGTGTCCTGACTGTGTGAGAGCTGAACCAGTGATCTACAAAAAACTGGAAGCAGCATCAGATGATACTGCACTTTTGAGAGCCTATGTTGGAGATAGACCTACATGGAGGAATCCCCAGCATCCATGGAGAGTGGATTGTAGGTTCAAGCTTACTGGAGTTCCAACGCTGGTTCGATGGGAGGAGAACGATAAGATCAGTGGTCGCCTTGAAGATCATGAAGCTCATGTGGAAAACAAAATTGATGCCCTTATTGCTGGTAAATAATTGTTGGCGTCTGTTCGATAAGACATGGGAAGTACCTTTCCCAACTTAGTATATTCATCGTTTTCTGTTCTTGAGGAACGTTTATGTGACCTCTGATAGATTGGTTGACGATTATATAGTTATCTCATGAATAAAACAACCGGAGAGTTTCAATCACCATTACAAATTTTAGGGGTGAACACTAAAACCGATTGAATTGAATCGAATTGAACGAAAATCCAGTTTTTACTAA

Coding sequence (CDS)

ATGCCGCTGAAGGTAGTGGACGCCACCCTCTCCGACTTCAATGCTGTATTCGACAAATTCCGATCACAACTGCCAAACAATAAAGCTAATTTCATCCTCTTTCTAGCCGACAAAGATCCTTCCACCTCTCGCAGCTGGTGTCCTGACTGTGTGAGAGCTGAACCAGTGATCTACAAAAAACTGGAAGCAGCATCAGATGATACTGCACTTTTGAGAGCCTATGTTGGAGATAGACCTACATGGAGGAATCCCCAGCATCCATGGAGAGTGGATTGTAGGTTCAAGCTTACTGGAGTTCCAACGCTGGTTCGATGGGAGGAGAACGATAAGATCAGTGGTCGCCTTGAAGATCATGAAGCTCATGTGGAAAACAAAATTGATGCCCTTATTGCTGGTAAATAA

Protein sequence

MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKKLEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEAHVENKIDALIAGK

Homology

[Close]

BLAST of IVF0011263.2 vs. ExPASy Swiss-Prot
Match: Q9FMN4 (Thioredoxin-like protein Clot OS=Arabidopsis thaliana OX=3702 GN=At5g42850 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.3e-42
Identity = 80/132 (60.61%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKFRS-QLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYK 60
           M LK VDA  S   +   + +S +   +K NFILFLAD DP+T +SWCPDCVRAEPVIYK
Sbjct: 1   MTLKKVDANPSTLESSLQELKSDETSRSKINFILFLADNDPTTGQSWCPDCVRAEPVIYK 60

Query: 61  KLEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHE 120
            LE   ++  L+RAY GDRPTWR P HPWRVD RFKLTGVPTLVRW + D + GRLEDH+
Sbjct: 61  TLEEFPEEVKLIRAYAGDRPTWRTPAHPWRVDSRFKLTGVPTLVRW-DGDSVKGRLEDHQ 120

Query: 121 AHVENKIDALIA 132
           AH+ + I  L+A
Sbjct: 121 AHLPHLILPLLA 131

[Close]

BLAST of IVF0011263.2 vs. ExPASy Swiss-Prot
Match: Q5Z9Z3 (Thioredoxin-like protein Clot OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0320000 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.3e-37
Identity = 74/136 (54.41%), Postives = 98/136 (72.06%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKF--RSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIY 60
           M ++ VDAT++DF+A FDK          K   +LFLAD+D S++++WCPDC  AEPVIY
Sbjct: 1   MTVEKVDATVADFDAHFDKLFAAGDDAEGKVKLLLFLADRDASSNQTWCPDCNVAEPVIY 60

Query: 61  KKLEAAS----DDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGR 120
            ++EAA+     D  LLRAYVGD+PTWR+P HPWR D RF+LTGVPTL+RW EN   + R
Sbjct: 61  DRVEAAAKGKEKDVVLLRAYVGDKPTWRDPAHPWRADPRFRLTGVPTLIRW-ENGAAAAR 120

Query: 121 LEDHEAHVENKIDALI 131
           L D EAH+ +K+DA++
Sbjct: 121 LGDDEAHLADKVDAVV 135

[Close]

BLAST of IVF0011263.2 vs. ExPASy Swiss-Prot
Match: Q9CQM5 (Thioredoxin domain-containing protein 17 OS=Mus musculus OX=10090 GN=Txndc17 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-12
Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 28  KANFILFLADKDPSTSRSWCPDCVRAEPVIYKKLEAASDDTALLRAYVGDRPTWRNPQHP 87
           K  F  F   KD +  +SWCPDCV AEPVI + L+  ++D   +   VGD+P W++P + 
Sbjct: 25  KTIFAYFSGSKD-TEGKSWCPDCVEAEPVIREGLKHVTEDCVFIYCQVGDKPYWKDPNND 84

Query: 88  WRVDCRFKLTGVPTLVRWEENDKI 112
           +R   + K+T VPTL+++    K+
Sbjct: 85  FRQ--KLKITAVPTLLKYGTPQKL 105

[Close]

BLAST of IVF0011263.2 vs. ExPASy Swiss-Prot
Match: Q6DBT3 (Thioredoxin domain-containing protein 17 OS=Danio rerio OX=7955 GN=txndc17 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-12
Identity = 35/84 (41.67%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 28  KANFILFLADKDPSTSRSWCPDCVRAEPVIYKKLEAASDDTALLRAYVGDRPTWRNPQHP 87
           K  F  F  DKD    +SWCPDCV+AEPV+  +L    + T  +   VGDRP W++  + 
Sbjct: 25  KEIFAYFSGDKD-EHGKSWCPDCVKAEPVVRAELPHLPEGTVFIYCQVGDRPYWKDSNND 84

Query: 88  WRVDCRFKLTGVPTLVRWEENDKI 112
           ++     KLTGVPTL+R+    K+
Sbjct: 85  FKK--TLKLTGVPTLLRYGTPQKL 105

[Close]

BLAST of IVF0011263.2 vs. ExPASy Swiss-Prot
Match: Q5REA8 (Thioredoxin domain-containing protein 17 OS=Pongo abelii OX=9601 GN=TXNDC17 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.7e-12
Identity = 32/86 (37.21%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 26  NNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKKLEAASDDTALLRAYVGDRPTWRNPQ 85
           N K  F  F   KD +  +SWCPDCV+AEPV+ + L+  S+    +   VG++P W++P 
Sbjct: 23  NGKTIFAYFTGSKD-AGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPN 82

Query: 86  HPWRVDCRFKLTGVPTLVRWEENDKI 112
           + +R +   K+T VPTL+++    K+
Sbjct: 83  NDFRKN--LKVTAVPTLIKYGTPQKL 105

[Close]

BLAST of IVF0011263.2 vs. ExPASy TrEMBL
Match: A0A1S4E462 (thioredoxin-like protein Clot isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500299 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.2e-73
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60
           MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK
Sbjct: 1   MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA 120
           LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA
Sbjct: 61  LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA 120

Query: 121 HVENKIDALIAGK 134
           HVENKIDALIAGK
Sbjct: 121 HVENKIDALIAGK 133

[Close]

BLAST of IVF0011263.2 vs. ExPASy TrEMBL
Match: A0A0A0LEX6 (DUF953 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G701560 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.8e-70
Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60
           MPLKVVDAT+SDF+AVFDKFRS+LPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK
Sbjct: 1   MPLKVVDATVSDFSAVFDKFRSELPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA 120
           LEAASDD ALLRAYVGDRPTWRNPQHPWRVD RFKLTGVPTLVRWEENDKISGRLEDHEA
Sbjct: 61  LEAASDDIALLRAYVGDRPTWRNPQHPWRVDPRFKLTGVPTLVRWEENDKISGRLEDHEA 120

Query: 121 HVENKIDALIAGK 134
           HVENKIDALIAGK
Sbjct: 121 HVENKIDALIAGK 133

[Close]

BLAST of IVF0011263.2 vs. ExPASy TrEMBL
Match: A0A6J1J7Z3 (thioredoxin-like protein Clot OS=Cucurbita maxima OX=3661 GN=LOC111482184 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.2e-66
Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60
           MPLK+ DAT+SDFNAVFDKFRS+LPNNKANFILFLADKDPSTS SWCPDCVRAEPVIYKK
Sbjct: 1   MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA 120
           LEAASDD ALLRAYVGDRPTWRNP+HPWRVD RFKLTGVPTLVRWE NDKISGRLEDHEA
Sbjct: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120

Query: 121 HVENKIDALIA 132
           HVE KIDALIA
Sbjct: 121 HVEKKIDALIA 131

[Close]

BLAST of IVF0011263.2 vs. ExPASy TrEMBL
Match: A0A6J1F6J0 (thioredoxin-like protein Clot OS=Cucurbita moschata OX=3662 GN=LOC111441330 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.2e-65
Identity = 120/131 (91.60%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60
           MPLK+ DA++SDFNAVFDKFRS+LPNNKANFILFLADKDPSTS SWCPDCVRAEPVIYKK
Sbjct: 1   MPLKLQDASVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA 120
           LEAASDD ALLRAYVGDRPTWRNP+HPWRVD RFKLTGVPTLVRWE NDKISGRLEDHEA
Sbjct: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120

Query: 121 HVENKIDALIA 132
           HVE KIDALIA
Sbjct: 121 HVEKKIDALIA 131

[Close]

BLAST of IVF0011263.2 vs. ExPASy TrEMBL
Match: A0A6J1DI40 (thioredoxin-like protein Clot OS=Momordica charantia OX=3673 GN=LOC111020265 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.9e-64
Identity = 117/133 (87.97%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60
           MPLK++DA  S+FNAVFDKFRS+LPNNKANFILFLAD DPSTS SWCPDCVRAEP IY+K
Sbjct: 1   MPLKLLDANPSNFNAVFDKFRSELPNNKANFILFLADNDPSTSLSWCPDCVRAEPGIYRK 60

Query: 61  LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA 120
           LEAAS+D ALLRAYVGDRPTWRNPQHPWRVD RFKL GVPTLVRW+ENDKISGRLEDHEA
Sbjct: 61  LEAASEDIALLRAYVGDRPTWRNPQHPWRVDSRFKLAGVPTLVRWDENDKISGRLEDHEA 120

Query: 121 HVENKIDALIAGK 134
           HVE KIDALIAGK
Sbjct: 121 HVEQKIDALIAGK 133

[Close]

BLAST of IVF0011263.2 vs. NCBI nr
Match: XP_016902770.1 (PREDICTED: thioredoxin-like protein Clot isoform X2 [Cucumis melo])

HSP 1 Score: 283 bits (723), Expect = 2.62e-96
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60
           MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK
Sbjct: 1   MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA 120
           LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA
Sbjct: 61  LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA 120

Query: 121 HVENKIDALIAGK 133
           HVENKIDALIAGK
Sbjct: 121 HVENKIDALIAGK 133

[Close]

BLAST of IVF0011263.2 vs. NCBI nr
Match: XP_011651794.1 (thioredoxin-like protein Clot isoform X2 [Cucumis sativus])

HSP 1 Score: 271 bits (694), Expect = 6.97e-92
Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60
           MPLKVVDAT+SDF+AVFDKFRS+LPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK
Sbjct: 1   MPLKVVDATVSDFSAVFDKFRSELPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA 120
           LEAASDD ALLRAYVGDRPTWRNPQHPWRVD RFKLTGVPTLVRWEENDKISGRLEDHEA
Sbjct: 61  LEAASDDIALLRAYVGDRPTWRNPQHPWRVDPRFKLTGVPTLVRWEENDKISGRLEDHEA 120

Query: 121 HVENKIDALIAGK 133
           HVENKIDALIAGK
Sbjct: 121 HVENKIDALIAGK 133

[Close]

BLAST of IVF0011263.2 vs. NCBI nr
Match: XP_022983629.1 (thioredoxin-like protein Clot [Cucurbita maxima] >KAG7018099.1 Thioredoxin-like protein Clot [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 258 bits (658), Expect = 2.09e-86
Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60
           MPLK+ DAT+SDFNAVFDKFRS+LPNNKANFILFLADKDPSTS SWCPDCVRAEPVIYKK
Sbjct: 1   MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA 120
           LEAASDD ALLRAYVGDRPTWRNP+HPWRVD RFKLTGVPTLVRWE NDKISGRLEDHEA
Sbjct: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120

Query: 121 HVENKIDALIA 131
           HVE KIDALIA
Sbjct: 121 HVEKKIDALIA 131

[Close]

BLAST of IVF0011263.2 vs. NCBI nr
Match: XP_023526301.1 (thioredoxin-like protein Clot [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256 bits (654), Expect = 8.51e-86
Identity = 120/131 (91.60%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60
           MPLK+ DAT+SDFNAVFDKFRS+LPNNKANFILFLADKDPSTS SWCPDCVRAEPVIYKK
Sbjct: 1   MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA 120
           LEAAS+D ALLRAYVGDRPTWRNP+HPWRVD RFKLTGVPTLVRWE NDKISGRLEDHEA
Sbjct: 61  LEAASEDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120

Query: 121 HVENKIDALIA 131
           HVE KIDALIA
Sbjct: 121 HVEKKIDALIA 131

[Close]

BLAST of IVF0011263.2 vs. NCBI nr
Match: XP_022934040.1 (thioredoxin-like protein Clot [Cucurbita moschata])

HSP 1 Score: 256 bits (654), Expect = 8.51e-86
Identity = 120/131 (91.60%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60
           MPLK+ DA++SDFNAVFDKFRS+LPNNKANFILFLADKDPSTS SWCPDCVRAEPVIYKK
Sbjct: 1   MPLKLQDASVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA 120
           LEAASDD ALLRAYVGDRPTWRNP+HPWRVD RFKLTGVPTLVRWE NDKISGRLEDHEA
Sbjct: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120

Query: 121 HVENKIDALIA 131
           HVE KIDALIA
Sbjct: 121 HVEKKIDALIA 131

[Close]

BLAST of IVF0011263.2 vs. TAIR 10
Match: AT5G42850.1 (Thioredoxin superfamily protein )

HSP 1 Score: 171.8 bits (434), Expect = 3.7e-43
Identity = 80/132 (60.61%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKFRS-QLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYK 60
           M LK VDA  S   +   + +S +   +K NFILFLAD DP+T +SWCPDCVRAEPVIYK
Sbjct: 1   MTLKKVDANPSTLESSLQELKSDETSRSKINFILFLADNDPTTGQSWCPDCVRAEPVIYK 60

Query: 61  KLEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHE 120
            LE   ++  L+RAY GDRPTWR P HPWRVD RFKLTGVPTLVRW + D + GRLEDH+
Sbjct: 61  TLEEFPEEVKLIRAYAGDRPTWRTPAHPWRVDSRFKLTGVPTLVRW-DGDSVKGRLEDHQ 120

Query: 121 AHVENKIDALIA 132
           AH+ + I  L+A
Sbjct: 121 AHLPHLILPLLA 131

[Close]

BLAST of IVF0011263.2 vs. TAIR 10
Match: AT5G42850.2 (Thioredoxin superfamily protein )

HSP 1 Score: 171.8 bits (434), Expect = 3.7e-43
Identity = 80/132 (60.61%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 1   MPLKVVDATLSDFNAVFDKFRS-QLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYK 60
           M LK VDA  S   +   + +S +   +K NFILFLAD DP+T +SWCPDCVRAEPVIYK
Sbjct: 1   MTLKKVDANPSTLESSLQELKSDETSRSKINFILFLADNDPTTGQSWCPDCVRAEPVIYK 60

Query: 61  KLEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHE 120
            LE   ++  L+RAY GDRPTWR P HPWRVD RFKLTGVPTLVRW + D + GRLEDH+
Sbjct: 61  TLEEFPEEVKLIRAYAGDRPTWRTPAHPWRVDSRFKLTGVPTLVRW-DGDSVKGRLEDHQ 120

Query: 121 AHVENKIDALIA 132
           AH+ + I  L+A
Sbjct: 121 AHLPHLILPLLA 131

The following BLAST results are available for this feature:

BLAST of IVF0011263.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMN4	5.3e-42	60.61	Thioredoxin-like protein Clot OS=Arabidopsis thaliana OX=3702 GN=At5g42850 PE=2 ...	[more]
Q5Z9Z3	1.3e-37	54.41	Thioredoxin-like protein Clot OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0...	[more]
Q9CQM5	2.5e-12	39.29	Thioredoxin domain-containing protein 17 OS=Mus musculus OX=10090 GN=Txndc17 PE=...	[more]
Q6DBT3	3.3e-12	41.67	Thioredoxin domain-containing protein 17 OS=Danio rerio OX=7955 GN=txndc17 PE=2 ...	[more]
Q5REA8	5.7e-12	37.21	Thioredoxin domain-containing protein 17 OS=Pongo abelii OX=9601 GN=TXNDC17 PE=2...	[more]

BLAST of IVF0011263.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E462	1.2e-73	100.00	thioredoxin-like protein Clot isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500299...	[more]
A0A0A0LEX6	2.8e-70	96.24	DUF953 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G701560 PE=4...	[more]
A0A6J1J7Z3	4.2e-66	92.37	thioredoxin-like protein Clot OS=Cucurbita maxima OX=3661 GN=LOC111482184 PE=4 S...	[more]
A0A6J1F6J0	1.2e-65	91.60	thioredoxin-like protein Clot OS=Cucurbita moschata OX=3662 GN=LOC111441330 PE=4...	[more]
A0A6J1DI40	3.9e-64	87.97	thioredoxin-like protein Clot OS=Momordica charantia OX=3673 GN=LOC111020265 PE=...	[more]

BLAST of IVF0011263.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902770.1	2.62e-96	100.00	PREDICTED: thioredoxin-like protein Clot isoform X2 [Cucumis melo]	[more]
XP_011651794.1	6.97e-92	96.24	thioredoxin-like protein Clot isoform X2 [Cucumis sativus]	[more]
XP_022983629.1	2.09e-86	92.37	thioredoxin-like protein Clot [Cucurbita maxima] >KAG7018099.1 Thioredoxin-like ...	[more]
XP_023526301.1	8.51e-86	91.60	thioredoxin-like protein Clot [Cucurbita pepo subsp. pepo]	[more]
XP_022934040.1	8.51e-86	91.60	thioredoxin-like protein Clot [Cucurbita moschata]	[more]

BLAST of IVF0011263.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42850.1	3.7e-43	60.61	Thioredoxin superfamily protein	[more]
AT5G42850.2	3.7e-43	60.61	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 4..132 e-value: 6.1E-33 score: 115.4
None	No IPR available	PANTHER	PTHR12452:SF0	THIOREDOXIN DOMAIN-CONTAINING PROTEIN 17	coord: 1..131
IPR010357	Thioredoxin domain-containing protein 17-like domain	PFAM	PF06110	DUF953	coord: 18..130 e-value: 4.6E-38 score: 129.5
IPR045108	Thioredoxin domain-containing protein 17-like	PANTHER	PTHR12452	42-9-9 PROTEIN-RELATED	coord: 1..131
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 18..120

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0011263	IVF0011263	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0011263.2-exon	IVF0011263.2-exon-chr04:23393702..23394190	exon
IVF0011263.2-exon	IVF0011263.2-exon-chr04:23397525..23397909	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0011263.2-three_prime_utr	IVF0011263.2-three_prime_utr-chr04:23393702..23393933	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0011263.2-cds	IVF0011263.2-cds-chr04:23393934..23394190	CDS
IVF0011263.2-cds	IVF0011263.2-cds-chr04:23397525..23397669	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0011263.2-five_prime_utr	IVF0011263.2-five_prime_utr-chr04:23397670..23397909	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0011263.2	IVF0011263.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004601	peroxidase activity
molecular_function	GO:0047134	protein-disulfide reductase (NAD(P)) activity