IVF0010324.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTGCGTCCTCCACTTCCCCGTCACCAATTCGCAATCCGATGCTCTGTCTTTCACTCCAAAACTTCCCGTCGCCGCTCTTGTTTCTTTCTTCTTCTCTAATGGAACCCTGCGTTGACACCAGGAAGCGACTACGGGACGATTCCAACGACGACTCTCTTTTCAATTCCATCGGATCCAGCTCCAAGTTCCTCCGACTTGAAAATCCCGCCGACTCCAACTTCGATGCGCCGGTTTCACAATCGACCGATTCGTTTCAGTCGCATCACACAATTCAGGAAGACCTGCTGAAGATTCTAGACGATACCGACGCTTCCATAGATAGGGAGGCGGCGATTCAAGATCTCGATTCGGTGATTAGAAGCTTCGAGAAGGAAATCGAAGTGCCAGTGCCTGTTGTTCAGCCTGAACTTGGATTTCTTCTAGAAGCGTCGGATGATGAATTAGGGCTTCCGCCTGCTGGTGAGAAAGAGGAAATTGAAGAAGCGGAGTTTTCGGGTAGCGGTGGTGTGAAAGGGGTTTTAGGGTTTGAGGATGAAATTGTTTCGAATTACTGTTGGTTTGATAATTTGAGGTGTGAGATTAAGGAATGGAGTCCGGAAGAGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGTTCGATCATACGGATGTGGCGGCGGAATTGCCGACGGCGTATCGATCGGAGAGGATGCCTTGTTTATAATAATAGTTAACTGAACACACACACTTTGTTTTGTTTGTATTTGTATTATTCGTAAGATGAAGAAACTAAAAACTTGGGGGAAAAAAGAAAAGAAAATTGAATGTGTGGAATTTGTTTAAGAAATAACAAGGGGTAACCAAAAAGAAAAGGCATAGAATTAATTAATTACACATACTAACTCTTATTTCTGACTTTCTATTGCAATGTCTTTTGGTACGGTGTTCTTTCGATCGGTCGG GTTGCGTCCTCCACTTCCCCGTCACCAATTCGCAATCCGATGCTCTGTCTTTCACTCCAAAACTTCCCGTCGCCGCTCTTGTTTCTTTCTTCTTCTCTAATGGAACCCTGCGTTGACACCAGGAAGCGACTACGGGACGATTCCAACGACGACTCTCTTTTCAATTCCATCGGATCCAGCTCCAAGTTCCTCCGACTTGAAAATCCCGCCGACTCCAACTTCGATGCGCCGGTTTCACAATCGACCGATTCGTTTCAGTCGCATCACACAATTCAGGAAGACCTGCTGAAGATTCTAGACGATACCGACGCTTCCATAGATAGGGAGGCGGCGATTCAAGATCTCGATTCGGTGATTAGAAGCTTCGAGAAGGAAATCGAAGTGCCAGTGCCTGTTGTTCAGCCTGAACTTGGATTTCTTCTAGAAGCGTCGGATGATGAATTAGGGCTTCCGCCTGCTGGTGAGAAAGAGGAAATTGAAGAAGCGGAGTTTTCGGGTAGCGGTGGTGTGAAAGGGGTTTTAGGGTTTGAGGATGAAATTGTTTCGAATTACTGTTGGTTTGATAATTTGAGGTGTGAGATTAAGGAATGGAGTCCGGAAGAGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGTTCGATCATACGGATGTGGCGGCGGAATTGCCGACGGCGTATCGATCGGAGAGGATGCCTTGTTTATAATAATAGTTAACTGAACACACACACTTTGTTTTGTTTGTATTTGTATTATTCGTAAGATGAAGAAACTAAAAACTTGGGGGAAAAAAGAAAAGAAAATTGAATGTGTGGAATTTGTTTAAGAAATAACAAGGGGTAACCAAAAAGAAAAGGCATAGAATTAATTAATTACACATACTAACTCTTATTTCTGACTTTCTATTGCAATGTCTTTTGGTACGGTGTTCTTTCGATCGGTCGG ATGCTCTGTCTTTCACTCCAAAACTTCCCGTCGCCGCTCTTGTTTCTTTCTTCTTCTCTAATGGAACCCTGCGTTGACACCAGGAAGCGACTACGGGACGATTCCAACGACGACTCTCTTTTCAATTCCATCGGATCCAGCTCCAAGTTCCTCCGACTTGAAAATCCCGCCGACTCCAACTTCGATGCGCCGGTTTCACAATCGACCGATTCGTTTCAGTCGCATCACACAATTCAGGAAGACCTGCTGAAGATTCTAGACGATACCGACGCTTCCATAGATAGGGAGGCGGCGATTCAAGATCTCGATTCGGTGATTAGAAGCTTCGAGAAGGAAATCGAAGTGCCAGTGCCTGTTGTTCAGCCTGAACTTGGATTTCTTCTAGAAGCGTCGGATGATGAATTAGGGCTTCCGCCTGCTGGTGAGAAAGAGGAAATTGAAGAAGCGGAGTTTTCGGGTAGCGGTGGTGTGAAAGGGGTTTTAGGGTTTGAGGATGAAATTGTTTCGAATTACTGTTGGTTTGATAATTTGAGGTGTGAGATTAAGGAATGGAGTCCGGAAGAGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGTTCGATCATACGGATGTGGCGGCGGAATTGCCGACGGCGTATCGATCGGAGAGGATGCCTTGTTTATAA MLCLSLQNFPSPLLFLSSSLMEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPVSQSTDSFQSHHTIQEDLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVPVPVVQPELGFLLEASDDELGLPPAGEKEEIEEAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWSPEEEEEVVALGGLFDHTDVAAELPTAYRSERMPCL Homology
BLAST of IVF0010324.1 vs. ExPASy TrEMBL
Match: A0A5D3DXI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00410 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 9.1e-119 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of IVF0010324.1 vs. ExPASy TrEMBL
Match: A0A5A7UZW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34725G00010 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 4.5e-118 Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of IVF0010324.1 vs. ExPASy TrEMBL
Match: A0A1S3BWV1 (uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 3.6e-107 Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of IVF0010324.1 vs. ExPASy TrEMBL
Match: A0A0A0LS21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 4.9e-96 Identity = 189/205 (92.20%), Postives = 192/205 (93.66%), Query Frame = 0
BLAST of IVF0010324.1 vs. ExPASy TrEMBL
Match: A0A6J1E5H5 (uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC111429674 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 1.4e-66 Identity = 148/210 (70.48%), Postives = 166/210 (79.05%), Query Frame = 0
BLAST of IVF0010324.1 vs. NCBI nr
Match: TYK28413.1 (uncharacterized protein E5676_scaffold629G00410 [Cucumis melo var. makuwa]) HSP 1 Score: 432 bits (1111), Expect = 1.32e-152 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of IVF0010324.1 vs. NCBI nr
Match: KAA0059746.1 (uncharacterized protein E6C27_scaffold34725G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 430 bits (1105), Expect = 1.09e-151 Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of IVF0010324.1 vs. NCBI nr
Match: XP_008453684.1 (PREDICTED: uncharacterized protein LOC103494333 [Cucumis melo]) HSP 1 Score: 393 bits (1010), Expect = 1.62e-137 Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of IVF0010324.1 vs. NCBI nr
Match: KGN63814.1 (hypothetical protein Csa_013978 [Cucumis sativus]) HSP 1 Score: 357 bits (915), Expect = 5.61e-123 Identity = 189/205 (92.20%), Postives = 192/205 (93.66%), Query Frame = 0
BLAST of IVF0010324.1 vs. NCBI nr
Match: XP_038890344.1 (uncharacterized protein LOC120079943 [Benincasa hispida]) HSP 1 Score: 319 bits (818), Expect = 3.12e-108 Identity = 172/205 (83.90%), Postives = 182/205 (88.78%), Query Frame = 0
BLAST of IVF0010324.1 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 3.3e-12 Identity = 64/187 (34.22%), Postives = 88/187 (47.06%), Query Frame = 0
BLAST of IVF0010324.1 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 66.2 bits (160), Expect = 3.7e-11 Identity = 54/142 (38.03%), Postives = 69/142 (48.59%), Query Frame = 0
BLAST of IVF0010324.1 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 66.2 bits (160), Expect = 3.7e-11 Identity = 54/142 (38.03%), Postives = 69/142 (48.59%), Query Frame = 0
BLAST of IVF0010324.1 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.8 bits (125), Expect = 4.2e-07 Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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