IVF0009471.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0009471.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Cytochrome b5 heme-binding domain-containing protein
Location	chr03: 22863630 .. 22864710 (+)
Sequence length	966
RNA-Seq Expression	IVF0009471.1
Synteny	IVF0009471.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAAGACATATCCAGAACCTTTTGCTCTTGTTTTTGCCTTTTGGATTGAAGATCAAAATATAAAAAAGTATGTTCTACTCACAATTTCAAGTAAAGCAATCGTCTCTTGTTGTCATCAATTTCCCCCAAACCTAATGGAGCTTAAGCTTACACCTCAGCAATTGTTAGCATACAATGGCAGCGATCGATCAAAGCCCTTGTATGTGGCTTTGAAAGGCCGCATCTACGATGTCACAAAATCAATTTTATTGTATGGTCCTGGTGGATCGTATAGCATGTTTGCCGGCAAGGATGCAAGTAGAGCTCTGGCCAAGATGAGCAAGAACATATTGGACATCACCTCTTCGCTCGTGGGCCTTTCTGAGAAAGAAATCAGTGTTCTCAATGATTGGGAGAAGAAATTTCAAGCTAAGTACCCTATTGTTGGCCGAGTTGTTTGAGTACTTAAACACATAACATCATAATTGTAATTTCATGTAACTCTTAAGTGAATAACTATATGGAAATGTTACAGAAAAGTATTATAAAAAATAATTTTTGTTTTCTAAAAATATGTTGTGATAAATGATAATTTATGATTGAATACTTGGTGGTTGATTGATTGAGGGAGGTATTCATGGCAGGGGAGAGTTGGAGTTTCAAAGTCCAATATGAATGAGTTACTAAACAAAAATTATAGTGCTATAGTATTATTAACAAGACAACTAAGATTGATTTGAGTGTAGTCCGGTTAATGAAAAAAAAAAAAGTAAGTAGTTGATAACTCTTTCTCTTGTAATAACAATTCTTTAATATGGCAAATCACAGTTGTGGAAATGTCATAAATTTGGTTGATATGACTCAAAATTGGAGGTTAAAATTCAATTGACCTAACCAAGATCAAGTGGATGGCCCGGTGCCTTTTCCAAAATGATATTCCTTTGGGTCCCCATTTAATTTTGGGTGAGTCATTTGAATTATTCGGAATGGGACATATCTAAAAATCTTTTGTTCCATTGTTTTCCTTCGATTAAAGATAAAATAAAAAGGAGAAAGTGATTGAATTCTTCACTTTCAGTTGAAGCTACCGTCCGGCGTCC

mRNA sequence

AAACAAGACATATCCAGAACCTTTTGCTCTTGTTTTTGCCTTTTGGATTGAAGATCAAAATATAAAAAAGTATGTTCTACTCACAATTTCAAGTAAAGCAATCGTCTCTTGTTGTCATCAATTTCCCCCAAACCTAATGGAGCTTAAGCTTACACCTCAGCAATTGTTAGCATACAATGGCAGCGATCGATCAAAGCCCTTGTATGTGGCTTTGAAAGGCCGCATCTACGATGTCACAAAATCAATTTTATTGTATGGTCCTGGTGGATCGTATAGCATGTTTGCCGGCAAGGATGCAAGTAGAGCTCTGGCCAAGATGAGCAAGAACATATTGGACATCACCTCTTCGCTCGTGGGCCTTTCTGAGAAAGAAATCAGTGTTCTCAATGATTGGGAGAAGAAATTTCAAGCTAAGTACCCTATTGTTGGCCGAGTTGTTTGAGTACTTAAACACATAACATCATAATTGTAATTTCATGTAACTCTTAAGTGAATAACTATATGGAAATGTTACAGAAAAGTATTATAAAAAATAATTTTTGTTTTCTAAAAATATGTTGTGATAAATGATAATTTATGATTGAATACTTGGTGGTTGATTGATTGAGGGAGGTATTCATGGCAGGGGAGAGTTGGAGTTTCAAAGTCCAATATGAATGAGTTACTAAACAAAAATTATAGTGCTATAGTATTATTAACAAGACAACTAAGATTGATTTGAGTGTAGTCCGGTTAATGAAAAAAAAAAAAGTAAGTAGTTGATAACTCTTTCTCTTGTAATAACAATTCTTTAATATGGCAAATCACAGTTGTGGAAATGTCATAAATTTGGTTGATATGACTCAAAATTGGAGGTTAAAATTCAATTGACCTAACCAAGATCAAGTGGATGGCCCGGTGCCTTTTCCAAAATGATATTCCTTTGGGTCCCCATTTAATTTTGGTTGAAGCTACCGTCCGGCGTCC

Coding sequence (CDS)

ATGGAGCTTAAGCTTACACCTCAGCAATTGTTAGCATACAATGGCAGCGATCGATCAAAGCCCTTGTATGTGGCTTTGAAAGGCCGCATCTACGATGTCACAAAATCAATTTTATTGTATGGTCCTGGTGGATCGTATAGCATGTTTGCCGGCAAGGATGCAAGTAGAGCTCTGGCCAAGATGAGCAAGAACATATTGGACATCACCTCTTCGCTCGTGGGCCTTTCTGAGAAAGAAATCAGTGTTCTCAATGATTGGGAGAAGAAATTTCAAGCTAAGTACCCTATTGTTGGCCGAGTTGTTTGA

Protein sequence

MELKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMSKNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV

Homology

[Close]

BLAST of IVF0009471.1 vs. ExPASy Swiss-Prot
Match: Q9SK39 (Probable steroid-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=MP3 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.8e-33
Identity = 66/99 (66.67%), Postives = 80/99 (80.81%), Query Frame = 0


Query: 3   LKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMS 62
           ++ T +QL  YNG+D SKP+YVA+KGR++DVT     YG GG YSMFAGKDASRAL KMS
Sbjct: 1   MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMS 60

Query: 63  KNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 102
           KN  D++ SL GL+EKEI+ LNDWE KF+AKYP+VGRVV
Sbjct: 61  KNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVV 99

[Close]

BLAST of IVF0009471.1 vs. ExPASy Swiss-Prot
Match: Q9FVZ9 (Membrane steroid-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP2 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-25
Identity = 56/97 (57.73%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 4   KLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMSK 63
           ++T ++LL Y+GSD  KPL +A+KG+IYDV++S L YGPGG Y++FAGKDASRALAKMS 
Sbjct: 120 EITAEELLQYDGSDPEKPLLMAIKGQIYDVSQSRLFYGPGGPYALFAGKDASRALAKMSF 179

Query: 64  NILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRV 101
              D+T  + GLS  E+S L DWE KF +KY  VG +
Sbjct: 180 EPQDLTDDISGLSLLELSALQDWEYKFSSKYVKVGTI 216

[Close]

BLAST of IVF0009471.1 vs. ExPASy Swiss-Prot
Match: Q9M2Z4 (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=MSBP2 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.4e-24
Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 4   KLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMSK 63
           ++T ++L  Y+GSD  KPL +A+KG+IYDV++S + YGPGG Y++FAGKDASRALAKMS 
Sbjct: 70  EITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF 129

Query: 64  NILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRV 101
              D+T  + GL   E+  L DWE KF +KY  VG +
Sbjct: 130 EDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTI 166

[Close]

BLAST of IVF0009471.1 vs. ExPASy Swiss-Prot
Match: Q9FVZ7 (Membrane steroid-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP1 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-23
Identity = 53/97 (54.64%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 4   KLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMSK 63
           +++ ++L  Y+GSD  KPL +A+KG+IYDVT+S + YGPGG Y++FAGKDASRALAKMS 
Sbjct: 73  EVSEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 132

Query: 64  NILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRV 101
              D+T  + GL   E+  L DWE KF  KY  VG V
Sbjct: 133 EPQDLTGDISGLGPFELDALQDWEYKFMGKYVKVGTV 169

[Close]

BLAST of IVF0009471.1 vs. ExPASy Swiss-Prot
Match: Q9XFM6 (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MSBP1 PE=1 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 4.2e-23
Identity = 53/97 (54.64%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 4   KLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMSK 63
           ++T ++L  Y+GSD  KPL +A+K +IYDVT+S + YGPGG Y++FAGKDASRALAKMS 
Sbjct: 74  EITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 133

Query: 64  NILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRV 101
              D+T  + GL   E+  L DWE KF +KY  VG V
Sbjct: 134 EEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTV 170

[Close]

BLAST of IVF0009471.1 vs. ExPASy TrEMBL
Match: A0A5A7VB92 (Putative steroid-binding protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001910 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.1e-48
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MELKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAK 60
           MELKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAK
Sbjct: 1   MELKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAK 60

Query: 61  MSKNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 102
           MSKNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV
Sbjct: 61  MSKNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 101

[Close]

BLAST of IVF0009471.1 vs. ExPASy TrEMBL
Match: A0A1S3BD60 (probable steroid-binding protein 3 OS=Cucumis melo OX=3656 GN=LOC103488357 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.1e-48
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MELKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAK 60
           MELKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAK
Sbjct: 1   MELKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAK 60

Query: 61  MSKNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 102
           MSKNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV
Sbjct: 61  MSKNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 101

[Close]

BLAST of IVF0009471.1 vs. ExPASy TrEMBL
Match: A0A0A0LMK3 (Cytochrome b5 heme-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382760 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 9.9e-44
Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MELKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAK 60
           MELKLTPQQLL YNGSDRSKPLYVALKG IYDVTKS+LLYG GGSY+MFAGKDASRALAK
Sbjct: 1   MELKLTPQQLLVYNGSDRSKPLYVALKGCIYDVTKSVLLYGLGGSYNMFAGKDASRALAK 60

Query: 61  MSKNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 102
           MSKN+ DITSSLVGLS+KEISVLNDWEKKFQAKYPIVGRVV
Sbjct: 61  MSKNVSDITSSLVGLSKKEISVLNDWEKKFQAKYPIVGRVV 101

[Close]

BLAST of IVF0009471.1 vs. ExPASy TrEMBL
Match: A0A6J1HBX6 (probable steroid-binding protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111462683 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.2e-37
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 3   LKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMS 62
           ++LTPQQL+AYNG+D SKP+YVALKGRI+DVT  +  YGPGG+Y+MFAGKDASRALAKM+
Sbjct: 1   MELTPQQLIAYNGTDSSKPIYVALKGRIFDVTTGVSFYGPGGAYAMFAGKDASRALAKMT 60

Query: 63  KNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 102
           KN  DI SSL GLSEKEI VLNDWEKKF+AKYPIVGRVV
Sbjct: 61  KNEEDINSSLEGLSEKEIGVLNDWEKKFEAKYPIVGRVV 99

[Close]

BLAST of IVF0009471.1 vs. ExPASy TrEMBL
Match: A0A6J1KBX0 (probable steroid-binding protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111492464 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.8e-37
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 3   LKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMS 62
           ++LTPQQL+AYNG+D SKP+YVALKGRI+DVT  +  YGPGG+Y+MFAGKDASRALAKM+
Sbjct: 1   MELTPQQLIAYNGTDPSKPIYVALKGRIFDVTTGVSFYGPGGAYAMFAGKDASRALAKMT 60

Query: 63  KNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 102
           KN  DI SSL GLSEKEI VLNDWEKKF+AKYPIVGRVV
Sbjct: 61  KNEEDINSSLEGLSEKEIGVLNDWEKKFEAKYPIVGRVV 99

[Close]

BLAST of IVF0009471.1 vs. NCBI nr
Match: XP_008445275.1 (PREDICTED: probable steroid-binding protein 3 [Cucumis melo] >KAA0064878.1 putative steroid-binding protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 199 bits (507), Expect = 2.20e-64
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MELKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAK 60
           MELKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAK
Sbjct: 1   MELKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAK 60

Query: 61  MSKNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 101
           MSKNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV
Sbjct: 61  MSKNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 101

[Close]

BLAST of IVF0009471.1 vs. NCBI nr
Match: XP_004138699.1 (probable steroid-binding protein 3 [Cucumis sativus] >KGN63003.1 hypothetical protein Csa_022130 [Cucumis sativus])

HSP 1 Score: 185 bits (470), Expect = 9.70e-59
Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MELKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAK 60
           MELKLTPQQLL YNGSDRSKPLYVALKG IYDVTKS+LLYG GGSY+MFAGKDASRALAK
Sbjct: 1   MELKLTPQQLLVYNGSDRSKPLYVALKGCIYDVTKSVLLYGLGGSYNMFAGKDASRALAK 60

Query: 61  MSKNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 101
           MSKN+ DITSSLVGLS+KEISVLNDWEKKFQAKYPIVGRVV
Sbjct: 61  MSKNVSDITSSLVGLSKKEISVLNDWEKKFQAKYPIVGRVV 101

[Close]

BLAST of IVF0009471.1 vs. NCBI nr
Match: XP_023547192.1 (probable steroid-binding protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163 bits (412), Expect = 6.61e-50
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 3   LKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMS 62
           ++LTPQQL+AYNG+D SKP+YVALKGRI+DVT  +  YGPGG+Y+MFAGKDASRALAKM+
Sbjct: 1   MELTPQQLIAYNGADSSKPIYVALKGRIFDVTTGVSFYGPGGAYAMFAGKDASRALAKMT 60

Query: 63  KNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 101
           KN  DI SSL GLSEKEI VLNDWEKKF+AKYPIVGRVV
Sbjct: 61  KNEEDINSSLEGLSEKEIGVLNDWEKKFEAKYPIVGRVV 99

[Close]

BLAST of IVF0009471.1 vs. NCBI nr
Match: XP_022962142.1 (probable steroid-binding protein 3 [Cucurbita moschata] >KAG6598539.1 putative steroid-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029471.1 putative steroid-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 163 bits (412), Expect = 6.61e-50
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 3   LKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMS 62
           ++LTPQQL+AYNG+D SKP+YVALKGRI+DVT  +  YGPGG+Y+MFAGKDASRALAKM+
Sbjct: 1   MELTPQQLIAYNGTDSSKPIYVALKGRIFDVTTGVSFYGPGGAYAMFAGKDASRALAKMT 60

Query: 63  KNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 101
           KN  DI SSL GLSEKEI VLNDWEKKF+AKYPIVGRVV
Sbjct: 61  KNEEDINSSLEGLSEKEIGVLNDWEKKFEAKYPIVGRVV 99

[Close]

BLAST of IVF0009471.1 vs. NCBI nr
Match: XP_022997574.1 (probable steroid-binding protein 3 [Cucurbita maxima])

HSP 1 Score: 162 bits (411), Expect = 9.38e-50
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 3   LKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMS 62
           ++LTPQQL+AYNG+D SKP+YVALKGRI+DVT  +  YGPGG+Y+MFAGKDASRALAKM+
Sbjct: 1   MELTPQQLIAYNGTDPSKPIYVALKGRIFDVTTGVSFYGPGGAYAMFAGKDASRALAKMT 60

Query: 63  KNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 101
           KN  DI SSL GLSEKEI VLNDWEKKF+AKYPIVGRVV
Sbjct: 61  KNEEDINSSLEGLSEKEIGVLNDWEKKFEAKYPIVGRVV 99

[Close]

BLAST of IVF0009471.1 vs. TAIR 10
Match: AT2G24940.1 (membrane-associated progesterone binding protein 2 )

HSP 1 Score: 141.4 bits (355), Expect = 4.1e-34
Identity = 66/99 (66.67%), Postives = 80/99 (80.81%), Query Frame = 0


Query: 3   LKLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMS 62
           ++ T +QL  YNG+D SKP+YVA+KGR++DVT     YG GG YSMFAGKDASRAL KMS
Sbjct: 1   MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMS 60

Query: 63  KNILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 102
           KN  D++ SL GL+EKEI+ LNDWE KF+AKYP+VGRVV
Sbjct: 61  KNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVV 99

[Close]

BLAST of IVF0009471.1 vs. TAIR 10
Match: AT3G48890.1 (membrane-associated progesterone binding protein 3 )

HSP 1 Score: 111.3 bits (277), Expect = 4.5e-25
Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 4   KLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMSK 63
           ++T ++L  Y+GSD  KPL +A+KG+IYDV++S + YGPGG Y++FAGKDASRALAKMS 
Sbjct: 70  EITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF 129

Query: 64  NILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRV 101
              D+T  + GL   E+  L DWE KF +KY  VG +
Sbjct: 130 EDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTI 166

[Close]

BLAST of IVF0009471.1 vs. TAIR 10
Match: AT5G52240.1 (membrane steroid binding protein 1 )

HSP 1 Score: 108.6 bits (270), Expect = 2.9e-24
Identity = 53/97 (54.64%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 4   KLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMSK 63
           ++T ++L  Y+GSD  KPL +A+K +IYDVT+S + YGPGG Y++FAGKDASRALAKMS 
Sbjct: 74  EITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 133

Query: 64  NILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRV 101
              D+T  + GL   E+  L DWE KF +KY  VG V
Sbjct: 134 EEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTV 170

[Close]

BLAST of IVF0009471.1 vs. TAIR 10
Match: AT5G52240.2 (membrane steroid binding protein 1 )

HSP 1 Score: 108.6 bits (270), Expect = 2.9e-24
Identity = 53/97 (54.64%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 4   KLTPQQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMSK 63
           ++T ++L  Y+GSD  KPL +A+K +IYDVT+S + YGPGG Y++FAGKDASRALAKMS 
Sbjct: 74  EITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 133

Query: 64  NILDITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRV 101
              D+T  + GL   E+  L DWE KF +KY  VG V
Sbjct: 134 EEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTV 170

[Close]

BLAST of IVF0009471.1 vs. TAIR 10
Match: AT4G14965.1 (membrane-associated progesterone binding protein 4 )

HSP 1 Score: 77.4 bits (189), Expect = 7.3e-15
Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 8   QQLLAYNGSDRSKPLYVALKGRIYDVTKSILLYGPGGSYSMFAGKDASRALAKMSKNILD 67
           ++L  YNG+D + P+ + + G ++DVTK    YG GG Y+ FAG+DASRA    +     
Sbjct: 45  EELALYNGTDETLPILLGILGSVFDVTKGKFHYGSGGGYNHFAGRDASRAFVSGNFTGDG 104

Query: 68  ITSSLVGLSEKEISVLNDWEKKFQAKYPIVGRVV 102
           +T SL GLS  E+  + DW   +   Y  VG++V
Sbjct: 105 LTDSLQGLSSSEVKSIVDWRGFYSRTYTPVGKLV 138

The following BLAST results are available for this feature:

BLAST of IVF0009471.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK39	5.8e-33	66.67	Probable steroid-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=MP3 PE=1 S...	[more]
Q9FVZ9	1.5e-25	57.73	Membrane steroid-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=M...	[more]
Q9M2Z4	6.4e-24	53.61	Membrane steroid-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=MSBP2 PE=1...	[more]
Q9FVZ7	1.1e-23	54.64	Membrane steroid-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=M...	[more]
Q9XFM6	4.2e-23	54.64	Membrane steroid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MSBP1 PE=1...	[more]

BLAST of IVF0009471.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VB92	5.1e-48	100.00	Putative steroid-binding protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3BD60	5.1e-48	100.00	probable steroid-binding protein 3 OS=Cucumis melo OX=3656 GN=LOC103488357 PE=4 ...	[more]
A0A0A0LMK3	9.9e-44	92.08	Cytochrome b5 heme-binding domain-containing protein OS=Cucumis sativus OX=3659 ...	[more]
A0A6J1HBX6	5.2e-37	78.79	probable steroid-binding protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111462683...	[more]
A0A6J1KBX0	6.8e-37	78.79	probable steroid-binding protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111492464 P...	[more]

BLAST of IVF0009471.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445275.1	2.20e-64	100.00	PREDICTED: probable steroid-binding protein 3 [Cucumis melo] >KAA0064878.1 putat...	[more]
XP_004138699.1	9.70e-59	92.08	probable steroid-binding protein 3 [Cucumis sativus] >KGN63003.1 hypothetical pr...	[more]
XP_023547192.1	6.61e-50	78.79	probable steroid-binding protein 3 [Cucurbita pepo subsp. pepo]	[more]
XP_022962142.1	6.61e-50	78.79	probable steroid-binding protein 3 [Cucurbita moschata] >KAG6598539.1 putative s...	[more]
XP_022997574.1	9.38e-50	78.79	probable steroid-binding protein 3 [Cucurbita maxima]	[more]

BLAST of IVF0009471.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24940.1	4.1e-34	66.67	membrane-associated progesterone binding protein 2	[more]
AT3G48890.1	4.5e-25	53.61	membrane-associated progesterone binding protein 3	[more]
AT5G52240.1	2.9e-24	54.64	membrane steroid binding protein 1	[more]
AT5G52240.2	2.9e-24	54.64	membrane steroid binding protein 1	[more]
AT4G14965.1	7.3e-15	39.36	membrane-associated progesterone binding protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001199	Cytochrome b5-like heme/steroid binding domain	SMART	SM01117	Cyt_b5_2	coord: 5..101 e-value: 1.0E-18 score: 78.1
IPR001199	Cytochrome b5-like heme/steroid binding domain	PFAM	PF00173	Cyt-b5	coord: 6..100 e-value: 4.8E-14 score: 52.3
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	GENE3D	3.10.120.10		coord: 2..101 e-value: 4.0E-35 score: 122.1
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	SUPERFAMILY	55856	Cytochrome b5-like heme/steroid binding domain	coord: 4..101
None	No IPR available	PANTHER	PTHR10281	MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED	coord: 4..101
None	No IPR available	PANTHER	PTHR10281:SF76	CALCUTTA CUP-RELATED	coord: 4..101

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0009471	IVF0009471	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0009471.1-five_prime_utr	IVF0009471.1-five_prime_utr-chr03:22863630..22863765	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0009471.1-exon	IVF0009471.1-exon-chr03:22863630..22864573	exon
IVF0009471.1-exon	IVF0009471.1-exon-chr03:22864689..22864710	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0009471.1-cds	IVF0009471.1-cds-chr03:22863766..22864071	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0009471.1-three_prime_utr	IVF0009471.1-three_prime_utr-chr03:22864072..22864573	three_prime_UTR
IVF0009471.1-three_prime_utr	IVF0009471.1-three_prime_utr-chr03:22864689..22864710	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0009471.1	IVF0009471.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0016020	membrane