IVF0008535.2 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTGTCTATATAGTTCTACCTTAATTAAAATATGATTTTAGAATTGGAAGCAAAAATCTATCTTAAAACGGCGAGTACCCGCGCTTCCATTTCACTTCATTTTGTCATCAACTCTTCAATTTCTTTCCAACTTCTTCTCTAGTTTCATATCGATTATAATTTCTCGAGGCGATTTTTTCCAGCATATCTGGAAGCCAATATAGTTGTAATTCATCAATTTGAGGTGACCCAATTTTTTTCTCCAAATTTGGAGTGAGTGTTTGTTCATAAAGCATAATTTTGTTTATGGGTTTCTTCACTAATCTTTGTATATGGCAGTTTTATTGTTCTCTGTTATTCCTTACTTCAATTTGTTCGCTGTTCTGTTGAAATTATCAGTGCATTTACACGTTGAAACTTGAGATTAACTTAAATTTAGAATATGGGTTCGTGTTTATGGCTGTTGTTGTATTTCTACATTGTTGTCATGGAATTAATAATTTGGAAGTTTCTTACATGAATTGTATTGTTATGATTTTTTTTTTTTATTTACTGAGCGGTTTCTGCTGCTGTGTTCCGTAGTTATGGAGATAAAGACGGATAGTAATGATGGCACGCTCATTTTAGTTAAGCAAGGAGCTGAAGCTGTGAGTTATAATCTCTTGTTGTTCTTTGGTCTGGGATGTTTTTTGGAATTGGGATGGTTATGGATAATGGAATATTTTGCTTTGATGTTCAATGAGTATGAGATGATTTTTAAAAGAGATTAGCGTGTATTCTCTTTGAAAACTTTTGAAATAAGCACTAATTAAGCGGTTTGGAATTTTCTAAATACTTTTCACTAGCCAAATTTGAGGAGTTTAAAAAGTGCTTCTGTTTTTCAAAAGTCATATCGAACTCATCCCTGGAATTTTAGTTGGACAAGTCTTTTGATAGTATTTTTTGTGGTTTTCGTAAATTAGTTTTCTTTTGTTCTCATCTTGTAGAGAGTGTTCGAGTCTACTTTCGTTGGAAGGAGATCGATTGTTAAGGAACGGTTCTCAAAGAAATATAGACATCCATTACTGGATTCCAAGCTTACACTCAAGCGATTGAATGCAGTTTGTTTCTTCTAATCAAACACTCTTTAGTATTAAAGAAATAACTAGCCAAAAGATTTTCTTGCATATATTTGACTGGAACTTCATGTTAGGAAGCAAGGTGCATGACAAAAGCTAGGCGACTTGGAGTAGCTACACCAGTGTTGTATGCTGTTGACCCGATATTATATACCCTGACATTTGAGTATGTGGAAGGTTCTTCTGTGAAAGATATATTGCTTGAAATTGGGTCAAATGGTGGTGATTCAAAACGGTTGAGTGACATTGCAATGCAGATTGGTGTTGCAATTGGGAAGTTACATGATGGTGGTTTAATTCATGGTGACCTGACCACATCAAACATGTTGATCAGGAGTGGTACCAATGAACTTGTGAGTTACATATTTAGTTATTATAATGTTCAAAGAGAGTTGTTTTAATTAATCTCCGTCATAAGGGCAACTGTCTTTTCAGGTTCTTATTGATTTTGGTCTGAGCTTCACTTCAACTATTCCAGAAGACAAAGCTGTTGATCTATATGTGTTGGAACGAGCGCTGCTATCATTGCATTCTTCATGTGGGAATTTGGTAAGTTGGTTTCCCTTGGCCTCGTTGTAAACAAAATTTGTTGTCTCCTCCATGGATAAGGGCAGTATCCTCTAGAGTGCTGGTTATTGTGTTGTGTTATGGGGATATATATGGCTTGAGAGAAGTAATAAAATCTTGGGGATGGGGAAATGGAAAGACATTGAGAGGAGGTCTAGTCCCATGCTATGTCTGAAACCTCACTTTTGGCTTTTATAATTACTTGTTAGGCTTGGCCTTGCTTGTTTTGGACGGGAGTCTTTTTCTTTATTTTTTTTATTTTGAGTTAGATTTAGATCTCCTTTGGGCTGTTATTTTGTAGAGCCACTCGTTGGCTTTCTTGTTTTCCTAATGAGTAATGAAAGCCTGATTTCTCGGTAAAAGGACATGGGAAAAACACTAATATATAAACTTTCCCTCTTAAATCATACGACTTAAGTGGTCTTTGAAAATGCTCATCATAGTCATATGAAGAAACACATGAGGAATGAGGGTCGATGAGGTAATGCATTTAGTTAGGAAGAAACATTGCAATGTGTGGTAACTGCTTATTGTTTTCGCCTCTAATTGGACATTTATGAGCCGTTTTTTGTGCTCAAATTCAGTCGGGTGGAGTGAGCAGGGATTGAGCCTCCGATTATAATAGTTGGTGTGTTGAACTACAATAACATACGATTAACTACAGCAATACCATTTGAAATCCCTCTGTTTTATTGTTTACTAAAATCTAACCATCTTCAAACTATAACAACCATAGACTACATAATATCCAACTCACTGCTTCAAATGCCTCCTATATATGTTTTGTCCTCGAAATCTTATGACTACTTATTGGCAAATCGAGTTGAATTGAAACTGAAATTGAATATGCTTTGAATGGTTCTACATTTTCATAGATGGAGTTAATTCTTGCTTCATACCGGAAGACTTCGAAGCAATGGTCGTCAACCTCGAACAAATTGGCTCAAGGTATTGATTCTGTCCTTTTCGTGTATTTTGTTTCTACTTATATATCAATTTCGTTCCATATGATTCATTGCTTCTTTTGTTTTGACTTTGATTTGTGTACAGTGCGTCAGAGAGGCCGAAAACGCACCATGGTTGGTTAAGTAATTTCACTTTTAATCTGTCTTGTTGAATTATCACTTGACTTCTTGTGTAGTAGACTCATTTGAACTTCAACAACGTATTTAATTAATCTTAATCTTAAAAACAAATCAACAATTTTGTTTTAGTGATTGCAATTTTGTGGGAAGAGTAGAGTTTTTTTTTGGTACAATGTAAAAAAGTATAAAAAATGAAAAGAACAAATTACTGAGTTCAGTAGTGTTTATTATTGAAGTTGAGTTATCGAG TCTGTCTATATAGTTCTACCTTAATTAAAATATGATTTTAGAATTGGAAGCAAAAATCTATCTTAAAACGGCGAGTACCCGCGCTTCCATTTCACTTCATTTTGTCATCAACTCTTCAATTTCTTTCCAACTTCTTCTCTAGTTTCATATCGATTATAATTTCTCGAGGCGATTTTTTCCAGCATATCTGGAAGCCAATATAGTTGTAATTCATCAATTTGAGTTATGGAGATAAAGACGGATAGTAATGATGGCACGCTCATTTTAGTTAAGCAAGGAGCTGAAGCTAGAGTGTTCGAGTCTACTTTCGTTGGAAGGAGATCGATTGTTAAGGAACGGTTCTCAAAGAAATATAGACATCCATTACTGGATTCCAAGCTTACACTCAAGCGATTGAATGCAGAAGCAAGGTGCATGACAAAAGCTAGGCGACTTGGAGTAGCTACACCAGTGTTGTATGCTGTTGACCCGATATTATATACCCTGACATTTGAGTATGTGGAAGGTTCTTCTGTGAAAGATATATTGCTTGAAATTGGGTCAAATGGTGGTGATTCAAAACGGTTGAGTGACATTGCAATGCAGATTGGTGTTGCAATTGGGAAGTTACATGATGGTGGTTTAATTCATGGTGACCTGACCACATCAAACATGTTGATCAGGAGTGGTACCAATGAACTTGTTCTTATTGATTTTGGTCTGAGCTTCACTTCAACTATTCCAGAAGACAAAGCTGTTGATCTATATGTGTTGGAACGAGCGCTGCTATCATTGCATTCTTCATGTGGGAATTTGATGGAGTTAATTCTTGCTTCATACCGGAAGACTTCGAAGCAATGGTCGTCAACCTCGAACAAATTGGCTCAAGTGCGTCAGAGAGGCCGAAAACGCACCATGGTTGGTTAAGTAATTTCACTTTTAATCTGTCTTGTTGAATTATCACTTGACTTCTTGTGTAGTAGACTCATTTGAACTTCAACAACGTATTTAATTAATCTTAATCTTAAAAACAAATCAACAATTTTGTTTTAGTGATTGCAATTTTGTGGGAAGAGTAGAGTTTTTTTTTGGTACAATGTAAAAAAGTATAAAAAATGAAAAGAACAAATTACTGAGTTCAGTAGTGTTTATTATTGAAGTTGAGTTATCGAG ATGGAGATAAAGACGGATAGTAATGATGGCACGCTCATTTTAGTTAAGCAAGGAGCTGAAGCTAGAGTGTTCGAGTCTACTTTCGTTGGAAGGAGATCGATTGTTAAGGAACGGTTCTCAAAGAAATATAGACATCCATTACTGGATTCCAAGCTTACACTCAAGCGATTGAATGCAGAAGCAAGGTGCATGACAAAAGCTAGGCGACTTGGAGTAGCTACACCAGTGTTGTATGCTGTTGACCCGATATTATATACCCTGACATTTGAGTATGTGGAAGGTTCTTCTGTGAAAGATATATTGCTTGAAATTGGGTCAAATGGTGGTGATTCAAAACGGTTGAGTGACATTGCAATGCAGATTGGTGTTGCAATTGGGAAGTTACATGATGGTGGTTTAATTCATGGTGACCTGACCACATCAAACATGTTGATCAGGAGTGGTACCAATGAACTTGTTCTTATTGATTTTGGTCTGAGCTTCACTTCAACTATTCCAGAAGACAAAGCTGTTGATCTATATGTGTTGGAACGAGCGCTGCTATCATTGCATTCTTCATGTGGGAATTTGATGGAGTTAATTCTTGCTTCATACCGGAAGACTTCGAAGCAATGGTCGTCAACCTCGAACAAATTGGCTCAAGTGCGTCAGAGAGGCCGAAAACGCACCATGGTTGGTTAA MEIKTDSNDGTLILVKQGAEARVFESTFVGRRSIVKERFSKKYRHPLLDSKLTLKRLNAEARCMTKARRLGVATPVLYAVDPILYTLTFEYVEGSSVKDILLEIGSNGGDSKRLSDIAMQIGVAIGKLHDGGLIHGDLTTSNMLIRSGTNELVLIDFGLSFTSTIPEDKAVDLYVLERALLSLHSSCGNLMELILASYRKTSKQWSSTSNKLAQVRQRGRKRTMVG Homology
BLAST of IVF0008535.2 vs. ExPASy Swiss-Prot
Match: Q54W07 (EKC/KEOPS complex subunit bud32 OS=Dictyostelium discoideum OX=44689 GN=bud32 PE=3 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.4e-47 Identity = 102/214 (47.66%), Postives = 137/214 (64.02%), Query Frame = 0
BLAST of IVF0008535.2 vs. ExPASy Swiss-Prot
Match: Q96S44 (EKC/KEOPS complex subunit TP53RK OS=Homo sapiens OX=9606 GN=TP53RK PE=1 SV=2) HSP 1 Score: 186.0 bits (471), Expect = 4.6e-46 Identity = 106/218 (48.62%), Postives = 140/218 (64.22%), Query Frame = 0
BLAST of IVF0008535.2 vs. ExPASy Swiss-Prot
Match: Q99PW4 (EKC/KEOPS complex subunit Tp53rk OS=Mus musculus OX=10090 GN=Tp53rk PE=2 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 3.0e-45 Identity = 108/218 (49.54%), Postives = 138/218 (63.30%), Query Frame = 0
BLAST of IVF0008535.2 vs. ExPASy Swiss-Prot
Match: Q9P7N1 (EKC/KEOPS complex subunit SPAP27G11.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP27G11.07c PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 6.6e-37 Identity = 92/227 (40.53%), Postives = 136/227 (59.91%), Query Frame = 0
BLAST of IVF0008535.2 vs. ExPASy Swiss-Prot
Match: Q2HGY8 (EKC/KEOPS complex subunit BUD32 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=BUD32 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 8.7e-37 Identity = 99/243 (40.74%), Postives = 138/243 (56.79%), Query Frame = 0
BLAST of IVF0008535.2 vs. ExPASy TrEMBL
Match: A0A1S3BPU1 (Non-specific serine/threonine protein kinase OS=Cucumis melo OX=3656 GN=LOC103492219 PE=3 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 1.0e-117 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of IVF0008535.2 vs. ExPASy TrEMBL
Match: A0A5D3CF78 (Non-specific serine/threonine protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003400 PE=3 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 1.0e-117 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of IVF0008535.2 vs. ExPASy TrEMBL
Match: A0A0A0LW55 (Non-specific serine/threonine protein kinase OS=Cucumis sativus OX=3659 GN=Csa_1G573000 PE=3 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 1.2e-113 Identity = 216/224 (96.43%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of IVF0008535.2 vs. ExPASy TrEMBL
Match: A0A6J1DK25 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111021824 PE=3 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 1.0e-109 Identity = 209/226 (92.48%), Postives = 220/226 (97.35%), Query Frame = 0
BLAST of IVF0008535.2 vs. ExPASy TrEMBL
Match: A0A6J1I5M0 (Non-specific serine/threonine protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111470128 PE=3 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 6.7e-109 Identity = 208/226 (92.04%), Postives = 218/226 (96.46%), Query Frame = 0
BLAST of IVF0008535.2 vs. NCBI nr
Match: XP_008450724.1 (PREDICTED: EKC/KEOPS complex subunit bud32 isoform X1 [Cucumis melo] >XP_008450725.1 PREDICTED: EKC/KEOPS complex subunit bud32 isoform X1 [Cucumis melo] >TYK10195.1 EKC/KEOPS complex subunit bud32 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 432 bits (1111), Expect = 2.10e-152 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of IVF0008535.2 vs. NCBI nr
Match: XP_011659926.1 (EKC/KEOPS complex subunit bud32 isoform X1 [Cucumis sativus] >XP_011659927.1 EKC/KEOPS complex subunit bud32 isoform X1 [Cucumis sativus] >XP_011659928.1 EKC/KEOPS complex subunit bud32 isoform X1 [Cucumis sativus] >XP_031736098.1 EKC/KEOPS complex subunit bud32 isoform X1 [Cucumis sativus] >XP_031736107.1 EKC/KEOPS complex subunit bud32 isoform X1 [Cucumis sativus] >XP_031736109.1 EKC/KEOPS complex subunit bud32 isoform X1 [Cucumis sativus] >XP_031736111.1 EKC/KEOPS complex subunit bud32 isoform X1 [Cucumis sativus] >KGN66130.1 hypothetical protein Csa_007401 [Cucumis sativus]) HSP 1 Score: 419 bits (1076), Expect = 4.23e-147 Identity = 216/224 (96.43%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of IVF0008535.2 vs. NCBI nr
Match: XP_038880661.1 (EKC/KEOPS complex subunit bud32 isoform X1 [Benincasa hispida] >XP_038880662.1 EKC/KEOPS complex subunit bud32 isoform X1 [Benincasa hispida] >XP_038880663.1 EKC/KEOPS complex subunit bud32 isoform X1 [Benincasa hispida]) HSP 1 Score: 417 bits (1072), Expect = 1.85e-146 Identity = 216/226 (95.58%), Postives = 223/226 (98.67%), Query Frame = 0
BLAST of IVF0008535.2 vs. NCBI nr
Match: XP_022154600.1 (EKC/KEOPS complex subunit bud32 [Momordica charantia] >XP_022154601.1 EKC/KEOPS complex subunit bud32 [Momordica charantia]) HSP 1 Score: 405 bits (1042), Expect = 6.92e-142 Identity = 209/226 (92.48%), Postives = 220/226 (97.35%), Query Frame = 0
BLAST of IVF0008535.2 vs. NCBI nr
Match: XP_023529406.1 (EKC/KEOPS complex subunit bud32 [Cucurbita pepo subsp. pepo] >XP_023529407.1 EKC/KEOPS complex subunit bud32 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 405 bits (1040), Expect = 1.40e-141 Identity = 209/226 (92.48%), Postives = 218/226 (96.46%), Query Frame = 0
BLAST of IVF0008535.2 vs. TAIR 10
Match: AT5G26110.1 (Protein kinase superfamily protein ) HSP 1 Score: 352.4 bits (903), Expect = 2.6e-97 Identity = 176/226 (77.88%), Postives = 202/226 (89.38%), Query Frame = 0
BLAST of IVF0008535.2 vs. TAIR 10
Match: AT5G26110.2 (Protein kinase superfamily protein ) HSP 1 Score: 255.4 bits (651), Expect = 4.4e-68 Identity = 127/163 (77.91%), Postives = 145/163 (88.96%), Query Frame = 0
BLAST of IVF0008535.2 vs. TAIR 10
Match: AT1G08120.1 (BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G26110.1); Has 235 Blast hits to 235 proteins in 96 species: Archae - 21; Bacteria - 0; Metazoa - 117; Fungi - 8; Plants - 47; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 1.3e-16 Identity = 45/70 (64.29%), Postives = 56/70 (80.00%), Query Frame = 0
BLAST of IVF0008535.2 vs. TAIR 10
Match: AT5G01850.1 (Protein kinase superfamily protein ) HSP 1 Score: 45.8 bits (107), Expect = 5.3e-05 Identity = 40/156 (25.64%), Postives = 70/156 (44.87%), Query Frame = 0
BLAST of IVF0008535.2 vs. TAIR 10
Match: AT3G50720.1 (Protein kinase superfamily protein ) HSP 1 Score: 43.5 bits (101), Expect = 2.6e-04 Identity = 27/86 (31.40%), Postives = 43/86 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|