IVF0008252.2 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAGAAACTACTTATTTTGGCGCCTTCTGATTCATAGTCAAGTGCTCTTCAAAACCCCACTTTACCCATTTTTTCCATTTCCTTCCTTCCACTCAAAACCCTAGTCGGAAAGCCGGGGCTGGAACAAGCATCGTCCATGGAAGAAGACGGCATAGGCATGGTTCTGGGCAGAGCCACGGAGCTCAGATTGAAGATCAGCAACTGCATTCACCAGGCAACAACCCCAGCCTCCTTCCGACAAGACCCATCTGCTGGAACGGAAAATGGGGCCGCCCTCGACGGCGGTTCCGGCTCCCAAGCTCCGGTTGGCGATGTGGAGGACGAGGAAGAAGTGGAACGACTTTTGGTTATCTGTGATGCCCTTGAGTCCTTGGAAACTCAGCTCTCCTTTTTGCAGGTTCTCTTAATTAGGGATTTTTTTTTCTCTTCTTTAACAGTTCTTGATTCGTGGGTCTCTTTCTTTTGTTGAATGTAGAGCGTTCTTCCTTGTCATTGTGGTAGAAAGAAAGTGAATTGAAACTTTAAAGCTAGTTGTTTAATTGCTCTGTTCTGCCAAATGAGACCTTGTTTCTTGCTTTGGAATTGTTTATGAATGCCGAAACTGTTATCGTAAGAATTGGTTTTCAATGTCAAGAATCTATTTGGCATGTTTCGGTTATGCTTTTCTTGAATTTTCTAGAAGTTTTCCTCTTATATGAATTCTTGTAAACAATTTTGGCTTTGGGAGTTATAATGCTGAAGGATATTCTCCCTTTGTCTGTCTCTTCTTGTCACTCTGCTCAAAAGCAATATGATTATGAACTTTTACCTTTAGTTCCATGGCTGTAATCGTAATGCTTTGGTTTGAATTGAACTTCAAGTCATGATATATTGGATTAGCTTTGAAATATTTGATGGTTGTATTTGTGGCATCCAGCATGTCTCAATATGGTAAAGAAGGTTAGAGTCATTGAGTAACCTTTCCATTTTTGTTTTTAGTTTTGATAAATATGTCTATTTGGAAAGTATTCGTTGTTTGCCATATCTTGATGTTTCTAATAATTGTACTCCAATTTGGAAATCAAAACAAAATACTTTTCTTGTTTTGTTATGTCAATGTGTAACAATCCAAAGTTAGTATCAAGAGAATCATAAGCAACAAATAAAAAACGAGGAAGATATGAAATGAACCTAATTTATCATCAGTCGAAGTACTGAAGTTGTGTGTATTTCTTCAGTTGTATAGATGGGTTGTTGCTAGAACCACAAAGCTTTTCTTGTTTCCTTTGCACTCTCAGTTGCCTGAGAAAACCCGAGAGGATATCATAGTACTAAATGTAGGTTCTATAATATGACGATAATCATTTGGTTTATGTTCTGTTACATTACTGGTTACATTTAATAAAACTCCAGGACGATATAGTATTTGTTGGATATATTTGCATACCTAGCTATATATTATAAGATGCAGATAATTCTTTCAGCTATAATTGACTTTGTTTCTCTTGTGATTTTAAGGATTTGCAACAACAGCAACAATATGAACGGGGAGCTGCCCTCAATGAGATCGAACACAGCCGCAAGATCCTACTTGACAAGCTCAAGGATTACAAAGGAGAGTATTTGGAAGTGGTAAAGGAAGCTTCTGCCTTCGCTGGGGAGGCAGTAAAGAACAACCATGACCTCATGCTTCCTCCATATCCAAGTCGCTCCACATATCCTCTTCACCTAGACAATGACCATTTATCACCATTCGTGTCTGCTCGCAAATCTGCCCGTAATGGGGTAACCTTGAGCTACATGACAAATGATGCCAAAAGAGAGTCAAGCGAGTCACTAAGTACCAGCAAAGAAGCGAGCACGAAAAACACAAGGAATGGATTAGGTTCACTCATAGCTGCAGCAGCCAAGGCAGTGTTTACCATTGTTGGTGTCGTGTCTATATTGAGCATGTCTGGTTTTGGGCCACGTATTGTAGCAAGGAAAGCTTCTCGTTTGAAGAAATCCAGTGCATACAAACAACGATCGACTGAAGAAGAGAGACCGAGAACTCAATGCCCGCCAGGAAAAATCTTGGTCGTTGAAGACGGGGAGGTTCGGTGTTTGGTGAAAGAGAGAGTCGAAGTTCCATTTTCTTCTGCTGTGGCAAAACCTGATGTAAACTATGGATGTGGTTAATTCTTCGTCATCTTTTTCTTCCATATTAAAACGTAAATTCCATCTTTAGAGAAGCTCGATTCTTCCGTGTGTAAAGCTAAACACATTTGTCCGCTAAAAATACATATAATATGAAAATATATTAGTTTTTGCAGTTTGAA CCAGAAACTACTTATTTTGGCGCCTTCTGATTCATAGTCAAGTGCTCTTCAAAACCCCACTTTACCCATTTTTTCCATTTCCTTCCTTCCACTCAAAACCCTAGTCGGAAAGCCGGGGCTGGAACAAGCATCGTCCATGGAAGAAGACGGCATAGGCATGGTTCTGGGCAGAGCCACGGAGCTCAGATTGAAGATCAGCAACTGCATTCACCAGGCAACAACCCCAGCCTCCTTCCGACAAGACCCATCTGCTGGAACGGAAAATGGGGCCGCCCTCGACGGCGGTTCCGGCTCCCAAGCTCCGGTTGGCGATGTGGAGGACGAGGAAGAAGTGGAACGACTTTTGGTTATCTGTGATGCCCTTGAGTCCTTGGAAACTCAGCTCTCCTTTTTGCAGGATTTGCAACAACAGCAACAATATGAACGGGGAGCTGCCCTCAATGAGATCGAACACAGCCGCAAGATCCTACTTGACAAGCTCAAGGATTACAAAGGAGAGTATTTGGAAGTGGTAAAGGAAGCTTCTGCCTTCGCTGGGGAGGCAGTAAAGAACAACCATGACCTCATGCTTCCTCCATATCCAAGTCGCTCCACATATCCTCTTCACCTAGACAATGACCATTTATCACCATTCGTGTCTGCTCGCAAATCTGCCCGTAATGGGGTAACCTTGAGCTACATGACAAATGATGCCAAAAGAGAGTCAAGCGAGTCACTAAGTACCAGCAAAGAAGCGAGCACGAAAAACACAAGGAATGGATTAGGTTCACTCATAGCTGCAGCAGCCAAGGCAGTGTTTACCATTGTTGGTGTCGTGTCTATATTGAGCATGTCTGGTTTTGGGCCACGTATTGTAGCAAGGAAAGCTTCTCGTTTGAAGAAATCCAGTGCATACAAACAACGATCGACTGAAGAAGAGAGACCGAGAACTCAATGCCCGCCAGGAAAAATCTTGGTCGTTGAAGACGGGGAGGTTCGGTGTTTGGTGAAAGAGAGAGTCGAAGTTCCATTTTCTTCTGCTGTGGCAAAACCTGATGTAAACTATGGATGTGGTTAATTCTTCGTCATCTTTTTCTTCCATATTAAAACGTAAATTCCATCTTTAGAGAAGCTCGATTCTTCCGTGTGTAAAGCTAAACACATTTGTCCGCTAAAAATACATATAATATGAAAATATATTAGTTTTTGCAGTTTGAA ATGGAAGAAGACGGCATAGGCATGGTTCTGGGCAGAGCCACGGAGCTCAGATTGAAGATCAGCAACTGCATTCACCAGGCAACAACCCCAGCCTCCTTCCGACAAGACCCATCTGCTGGAACGGAAAATGGGGCCGCCCTCGACGGCGGTTCCGGCTCCCAAGCTCCGGTTGGCGATGTGGAGGACGAGGAAGAAGTGGAACGACTTTTGGTTATCTGTGATGCCCTTGAGTCCTTGGAAACTCAGCTCTCCTTTTTGCAGGATTTGCAACAACAGCAACAATATGAACGGGGAGCTGCCCTCAATGAGATCGAACACAGCCGCAAGATCCTACTTGACAAGCTCAAGGATTACAAAGGAGAGTATTTGGAAGTGGTAAAGGAAGCTTCTGCCTTCGCTGGGGAGGCAGTAAAGAACAACCATGACCTCATGCTTCCTCCATATCCAAGTCGCTCCACATATCCTCTTCACCTAGACAATGACCATTTATCACCATTCGTGTCTGCTCGCAAATCTGCCCGTAATGGGGTAACCTTGAGCTACATGACAAATGATGCCAAAAGAGAGTCAAGCGAGTCACTAAGTACCAGCAAAGAAGCGAGCACGAAAAACACAAGGAATGGATTAGGTTCACTCATAGCTGCAGCAGCCAAGGCAGTGTTTACCATTGTTGGTGTCGTGTCTATATTGAGCATGTCTGGTTTTGGGCCACGTATTGTAGCAAGGAAAGCTTCTCGTTTGAAGAAATCCAGTGCATACAAACAACGATCGACTGAAGAAGAGAGACCGAGAACTCAATGCCCGCCAGGAAAAATCTTGGTCGTTGAAGACGGGGAGGTTCGGTGTTTGGTGAAAGAGAGAGTCGAAGTTCCATTTTCTTCTGCTGTGGCAAAACCTGATGTAAACTATGGATGTGGTTAA MEEDGIGMVLGRATELRLKISNCIHQATTPASFRQDPSAGTENGAALDGGSGSQAPVGDVEDEEEVERLLVICDALESLETQLSFLQDLQQQQQYERGAALNEIEHSRKILLDKLKDYKGEYLEVVKEASAFAGEAVKNNHDLMLPPYPSRSTYPLHLDNDHLSPFVSARKSARNGVTLSYMTNDAKRESSESLSTSKEASTKNTRNGLGSLIAAAAKAVFTIVGVVSILSMSGFGPRIVARKASRLKKSSAYKQRSTEEERPRTQCPPGKILVVEDGEVRCLVKERVEVPFSSAVAKPDVNYGCG Homology
BLAST of IVF0008252.2 vs. ExPASy Swiss-Prot
Match: Q9XII1 (Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 8.9e-61 Identity = 143/313 (45.69%), Postives = 198/313 (63.26%), Query Frame = 0
BLAST of IVF0008252.2 vs. ExPASy Swiss-Prot
Match: Q9FK13 (Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06 Identity = 48/153 (31.37%), Postives = 73/153 (47.71%), Query Frame = 0
BLAST of IVF0008252.2 vs. ExPASy TrEMBL
Match: A0A5D3CR19 (Plastid division protein PDV2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001450 PE=4 SV=1) HSP 1 Score: 582.8 bits (1501), Expect = 8.4e-163 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
BLAST of IVF0008252.2 vs. ExPASy TrEMBL
Match: A0A1S4E332 (plastid division protein PDV2 OS=Cucumis melo OX=3656 GN=LOC103498462 PE=3 SV=1) HSP 1 Score: 580.5 bits (1495), Expect = 4.2e-162 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0
BLAST of IVF0008252.2 vs. ExPASy TrEMBL
Match: A0A5A7TVN3 (Plastid division protein PDV2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004930 PE=3 SV=1) HSP 1 Score: 576.6 bits (1485), Expect = 6.0e-161 Identity = 302/305 (99.02%), Postives = 304/305 (99.67%), Query Frame = 0
BLAST of IVF0008252.2 vs. ExPASy TrEMBL
Match: A0A0A0LP41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238870 PE=4 SV=1) HSP 1 Score: 526.6 bits (1355), Expect = 7.1e-146 Identity = 279/306 (91.18%), Postives = 286/306 (93.46%), Query Frame = 0
BLAST of IVF0008252.2 vs. ExPASy TrEMBL
Match: A0A6J1G827 (plastid division protein PDV2-like OS=Cucurbita moschata OX=3662 GN=LOC111451618 PE=3 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 1.5e-119 Identity = 238/307 (77.52%), Postives = 266/307 (86.64%), Query Frame = 0
BLAST of IVF0008252.2 vs. NCBI nr
Match: TYK13638.1 (plastid division protein PDV2 [Cucumis melo var. makuwa]) HSP 1 Score: 580 bits (1496), Expect = 2.05e-208 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
BLAST of IVF0008252.2 vs. NCBI nr
Match: XP_016902385.1 (PREDICTED: plastid division protein PDV2 [Cucumis melo]) HSP 1 Score: 578 bits (1490), Expect = 7.61e-205 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0
BLAST of IVF0008252.2 vs. NCBI nr
Match: KAA0045947.1 (plastid division protein PDV2 [Cucumis melo var. makuwa]) HSP 1 Score: 574 bits (1480), Expect = 1.84e-203 Identity = 302/305 (99.02%), Postives = 304/305 (99.67%), Query Frame = 0
BLAST of IVF0008252.2 vs. NCBI nr
Match: KGN61771.1 (hypothetical protein Csa_006667 [Cucumis sativus]) HSP 1 Score: 524 bits (1350), Expect = 3.63e-186 Identity = 279/306 (91.18%), Postives = 286/306 (93.46%), Query Frame = 0
BLAST of IVF0008252.2 vs. NCBI nr
Match: XP_031736713.1 (plastid division protein PDV2 [Cucumis sativus]) HSP 1 Score: 524 bits (1350), Expect = 1.77e-183 Identity = 279/306 (91.18%), Postives = 286/306 (93.46%), Query Frame = 0
BLAST of IVF0008252.2 vs. TAIR 10
Match: AT2G16070.2 (plastid division2 ) HSP 1 Score: 235.3 bits (599), Expect = 6.3e-62 Identity = 143/313 (45.69%), Postives = 198/313 (63.26%), Query Frame = 0
BLAST of IVF0008252.2 vs. TAIR 10
Match: AT2G16070.1 (plastid division2 ) HSP 1 Score: 180.6 bits (457), Expect = 1.9e-45 Identity = 104/222 (46.85%), Postives = 144/222 (64.86%), Query Frame = 0
BLAST of IVF0008252.2 vs. TAIR 10
Match: AT5G53280.1 (plastid division1 ) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-07 Identity = 48/153 (31.37%), Postives = 73/153 (47.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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