IVF0008069.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCAGTGTAAAGCAGATTCCTCAGGTAGAGGTAAAGGATGAGGTTTGGTCAGCCACAACCGTTCACTGCATAATTGGCATCCACAAGAACAGGGCAAAGTTAAAATTCCTTAGAACCAAGCAAGATGGTAAATCTGAGGTTGAAAAAGTGAACGGTGAAGATGAAGATGAGAAAGAAGAAGAAGAAGTCCCACAAAAATGCAAACAACAAAGCAAGGAAGGAGGCCTCTGGATTGAAAAGAGTAAAATCCTCTAA ATGTTCAGTGTAAAGCAGATTCCTCAGGTAGAGGTAAAGGATGAGGTTTGGTCAGCCACAACCGTTCACTGCATAATTGGCATCCACAAGAACAGGGCAAAGTTAAAATTCCTTAGAACCAAGCAAGATGGTAAATCTGAGGTTGAAAAAGTGAACGGTGAAGATGAAGATGAGAAAGAAGAAGAAGAAGTCCCACAAAAATGCAAACAACAAAGCAAGGAAGGAGGCCTCTGGATTGAAAAGAGTAAAATCCTCTAA ATGTTCAGTGTAAAGCAGATTCCTCAGGTAGAGGTAAAGGATGAGGTTTGGTCAGCCACAACCGTTCACTGCATAATTGGCATCCACAAGAACAGGGCAAAGTTAAAATTCCTTAGAACCAAGCAAGATGGTAAATCTGAGGTTGAAAAAGTGAACGGTGAAGATGAAGATGAGAAAGAAGAAGAAGAAGTCCCACAAAAATGCAAACAACAAAGCAAGGAAGGAGGCCTCTGGATTGAAAAGAGTAAAATCCTCTAA MFSVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEEEVPQKCKQQSKEGGLWIEKSKIL Homology
BLAST of IVF0008069.1 vs. ExPASy TrEMBL
Match: A0A5A7TV72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G006200 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.1e-15 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 0
BLAST of IVF0008069.1 vs. ExPASy TrEMBL
Match: A0A5D3CJD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00890 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.8e-14 Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = 0
BLAST of IVF0008069.1 vs. ExPASy TrEMBL
Match: A0A5A7UWQ4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.9e-11 Identity = 38/72 (52.78%), Postives = 60/72 (83.33%), Query Frame = 0
BLAST of IVF0008069.1 vs. ExPASy TrEMBL
Match: A0A5A7T268 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002410 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.6e-10 Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 0
BLAST of IVF0008069.1 vs. ExPASy TrEMBL
Match: A0A5D3CYF5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00140 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.6e-10 Identity = 39/66 (59.09%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of IVF0008069.1 vs. NCBI nr
Match: KAA0046046.1 (hypothetical protein E6C27_scaffold243G006200 [Cucumis melo var. makuwa]) HSP 1 Score: 90.1 bits (222), Expect = 5.26e-21 Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 0
BLAST of IVF0008069.1 vs. NCBI nr
Match: TYK11921.1 (hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa]) HSP 1 Score: 87.0 bits (214), Expect = 7.56e-19 Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = 0
BLAST of IVF0008069.1 vs. NCBI nr
Match: KAA0060282.1 (drebrin-like [Cucumis melo var. makuwa]) HSP 1 Score: 76.6 bits (187), Expect = 1.65e-15 Identity = 38/70 (54.29%), Postives = 58/70 (82.86%), Query Frame = 0
BLAST of IVF0008069.1 vs. NCBI nr
Match: KAA0036868.1 (hypothetical protein E6C27_scaffold20G001780 [Cucumis melo var. makuwa] >TYJ95928.1 hypothetical protein E5676_scaffold110G002410 [Cucumis melo var. makuwa]) HSP 1 Score: 73.9 bits (180), Expect = 6.72e-15 Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 0
BLAST of IVF0008069.1 vs. NCBI nr
Match: KAA0042322.1 (hypothetical protein E6C27_scaffold795G00160 [Cucumis melo var. makuwa] >TYK15446.1 hypothetical protein E5676_scaffold477G00140 [Cucumis melo var. makuwa]) HSP 1 Score: 72.8 bits (177), Expect = 1.48e-14 Identity = 39/63 (61.90%), Postives = 53/63 (84.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|