IVF0008069.1 (mRNA) Melon (IVF77) v1

Overview
NameIVF0008069.1
TypemRNA
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein MNN4-like
Locationchr07: 11504397 .. 11504654 (+)
Sequence length258
RNA-Seq ExpressionIVF0008069.1
SyntenyIVF0008069.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAGTGTAAAGCAGATTCCTCAGGTAGAGGTAAAGGATGAGGTTTGGTCAGCCACAACCGTTCACTGCATAATTGGCATCCACAAGAACAGGGCAAAGTTAAAATTCCTTAGAACCAAGCAAGATGGTAAATCTGAGGTTGAAAAAGTGAACGGTGAAGATGAAGATGAGAAAGAAGAAGAAGAAGTCCCACAAAAATGCAAACAACAAAGCAAGGAAGGAGGCCTCTGGATTGAAAAGAGTAAAATCCTCTAA

mRNA sequence

ATGTTCAGTGTAAAGCAGATTCCTCAGGTAGAGGTAAAGGATGAGGTTTGGTCAGCCACAACCGTTCACTGCATAATTGGCATCCACAAGAACAGGGCAAAGTTAAAATTCCTTAGAACCAAGCAAGATGGTAAATCTGAGGTTGAAAAAGTGAACGGTGAAGATGAAGATGAGAAAGAAGAAGAAGAAGTCCCACAAAAATGCAAACAACAAAGCAAGGAAGGAGGCCTCTGGATTGAAAAGAGTAAAATCCTCTAA

Coding sequence (CDS)

ATGTTCAGTGTAAAGCAGATTCCTCAGGTAGAGGTAAAGGATGAGGTTTGGTCAGCCACAACCGTTCACTGCATAATTGGCATCCACAAGAACAGGGCAAAGTTAAAATTCCTTAGAACCAAGCAAGATGGTAAATCTGAGGTTGAAAAAGTGAACGGTGAAGATGAAGATGAGAAAGAAGAAGAAGAAGTCCCACAAAAATGCAAACAACAAAGCAAGGAAGGAGGCCTCTGGATTGAAAAGAGTAAAATCCTCTAA

Protein sequence

MFSVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEEEVPQKCKQQSKEGGLWIEKSKIL
Homology
BLAST of IVF0008069.1 vs. ExPASy TrEMBL
Match: A0A5A7TV72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G006200 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.1e-15
Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 0

Query: 3   SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEE 62
           ++KQ PQVE+KD VW+ TT+H II +HKN+AK K  +TKQDGKSEVEKV+ E EDEKE+E
Sbjct: 53  TLKQFPQVELKDGVWTVTTLHHIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDE 112

Query: 63  EVPQKCKQ 71
           EVP KCK+
Sbjct: 113 EVPLKCKR 120

BLAST of IVF0008069.1 vs. ExPASy TrEMBL
Match: A0A5D3CJD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00890 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.8e-14
Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = 0

Query: 3   SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEE 62
           +++Q PQVE+KD VW+  T+H II +HKN+AK K  +TKQDGKSEVEKV+ E EDEKE+E
Sbjct: 53  TLEQFPQVELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDE 112

Query: 63  EVPQKCKQQS 73
           EVP KCK+++
Sbjct: 113 EVPLKCKRRN 122

BLAST of IVF0008069.1 vs. ExPASy TrEMBL
Match: A0A5A7UWQ4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-11
Identity = 38/72 (52.78%), Postives = 60/72 (83.33%), Query Frame = 0

Query: 3   SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEE 62
           ++  +PQ+ VKD +WS+ T++ II I++N+AKLK+L+ KQDGKSEV++V+ +DE+EKEE+
Sbjct: 63  ALDNLPQIGVKDGIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVKEVDDKDEEEKEED 122

Query: 63  EVPQKCKQQSKE 75
            VP K K+QS++
Sbjct: 123 NVPLKRKRQSED 134

BLAST of IVF0008069.1 vs. ExPASy TrEMBL
Match: A0A5A7T268 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002410 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-10
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 0

Query: 3  SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKE 61
          ++ Q+PQVEVKD +WS+ T+H II +HKN+ KLK L+TK DGKSEVEKV+ E+E EKE
Sbjct: 36 ALDQLPQVEVKDGIWSSVTLHGIIVVHKNKIKLKRLKTKHDGKSEVEKVDDEEEIEKE 93

BLAST of IVF0008069.1 vs. ExPASy TrEMBL
Match: A0A5D3CYF5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00140 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.6e-10
Identity = 39/66 (59.09%), Postives = 55/66 (83.33%), Query Frame = 0

Query: 9  QVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEEEVPQKC 68
          +V+VKD + S+TT+H II ++KN+AKLK L+TKQDGKSEVEKV  E EDEK++++VP K 
Sbjct: 19 EVKVKDGILSSTTLHRIIAVNKNKAKLKCLKTKQDGKSEVEKVEDEHEDEKQKDDVPLKR 78

Query: 69 KQQSKE 75
          K+Q ++
Sbjct: 79 KRQGEK 84

BLAST of IVF0008069.1 vs. NCBI nr
Match: KAA0046046.1 (hypothetical protein E6C27_scaffold243G006200 [Cucumis melo var. makuwa])

HSP 1 Score: 90.1 bits (222), Expect = 5.26e-21
Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 0

Query: 3   SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEE 62
           ++KQ PQVE+KD VW+ TT+H II +HKN+AK K  +TKQDGKSEVEKV+ E EDEKE+E
Sbjct: 53  TLKQFPQVELKDGVWTVTTLHHIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDE 112

Query: 63  EVPQKCK 69
           EVP KCK
Sbjct: 113 EVPLKCK 119

BLAST of IVF0008069.1 vs. NCBI nr
Match: TYK11921.1 (hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa])

HSP 1 Score: 87.0 bits (214), Expect = 7.56e-19
Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = 0

Query: 3   SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEE 62
           +++Q PQVE+KD VW+  T+H II +HKN+AK K  +TKQDGKSEVEKV+ E EDEKE+E
Sbjct: 53  TLEQFPQVELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDE 112

Query: 63  EVPQKCKQQS 72
           EVP KCK+++
Sbjct: 113 EVPLKCKRRN 122

BLAST of IVF0008069.1 vs. NCBI nr
Match: KAA0060282.1 (drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 1.65e-15
Identity = 38/70 (54.29%), Postives = 58/70 (82.86%), Query Frame = 0

Query: 3   SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEE 62
           ++  +PQ+ VKD +WS+ T++ II I++N+AKLK+L+ KQDGKSEV++V+ +DE+EKEE+
Sbjct: 63  ALDNLPQIGVKDGIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVKEVDDKDEEEKEED 122

Query: 63  EVPQKCKQQS 72
            VP K K+QS
Sbjct: 123 NVPLKRKRQS 132

BLAST of IVF0008069.1 vs. NCBI nr
Match: KAA0036868.1 (hypothetical protein E6C27_scaffold20G001780 [Cucumis melo var. makuwa] >TYJ95928.1 hypothetical protein E5676_scaffold110G002410 [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 6.72e-15
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 0

Query: 3  SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKE 60
          ++ Q+PQVEVKD +WS+ T+H II +HKN+ KLK L+TK DGKSEVEKV+ E+E EKE
Sbjct: 36 ALDQLPQVEVKDGIWSSVTLHGIIVVHKNKIKLKRLKTKHDGKSEVEKVDDEEEIEKE 93

BLAST of IVF0008069.1 vs. NCBI nr
Match: KAA0042322.1 (hypothetical protein E6C27_scaffold795G00160 [Cucumis melo var. makuwa] >TYK15446.1 hypothetical protein E5676_scaffold477G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 1.48e-14
Identity = 39/63 (61.90%), Postives = 53/63 (84.13%), Query Frame = 0

Query: 9  QVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEEEVPQKC 68
          +V+VKD + S+TT+H II ++KN+AKLK L+TKQDGKSEVEKV  E EDEK++++VP K 
Sbjct: 19 EVKVKDGILSSTTLHRIIAVNKNKAKLKCLKTKQDGKSEVEKVEDEHEDEKQKDDVPLKR 78

Query: 69 KQQ 71
          K+Q
Sbjct: 79 KRQ 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TV722.1e-1567.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CJD11.8e-1462.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UWQ41.9e-1152.78Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE... [more]
A0A5A7T2681.6e-1063.79Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CYF54.6e-1059.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0046046.15.26e-2168.66hypothetical protein E6C27_scaffold243G006200 [Cucumis melo var. makuwa][more]
TYK11921.17.56e-1962.86hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa][more]
KAA0060282.11.65e-1554.29drebrin-like [Cucumis melo var. makuwa][more]
KAA0036868.16.72e-1563.79hypothetical protein E6C27_scaffold20G001780 [Cucumis melo var. makuwa] >TYJ9592... [more]
KAA0042322.11.48e-1461.90hypothetical protein E6C27_scaffold795G00160 [Cucumis melo var. makuwa] >TYK1544... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..85

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
IVF0008069IVF0008069gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
IVF0008069.1-exonIVF0008069.1-exon-chr07:11504397..11504654exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
IVF0008069.1-cdsIVF0008069.1-cds-chr07:11504397..11504654CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
IVF0008069.1IVF0008069.1-proteinpolypeptide