IVF0006510.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGCACCCTAATTGATTGGTGAGGCTTCAAAAAAGATTGTAAGTAGGTTAGTTTTAGTGATGTTAAATTTTGGGAAAAATTTCTCGGATACTAAAAGATGCAAATAATGGTTAATCAAAAGCGAGTATAGGTGAATGCACAACGAAAAAGAGAGTTCATATGCTATGCTTGGGTTCTCAAAGTCTGAGTTATTGAGAGTGATTTTGGATGGAAAGATATAAATTGTCGTATAAGAAGATAAGTTATAGTTCTAAGAAAATAAAATTGGAACAAATAACAGGAAGGAGGAGCTAATGGGGCGAAGGAGAGAGTTGAAGTTGGATTTTGGGTAAAGCAGTGTGCTCAGCCTCAACCGATGTACCCTAATCAACTTAGGGAATGTATGTATATGTAGAAGTAAATTCATCCTTCTTCTCAAATCTTGTAGTTTCTATAGTTTCCACCTTTGATTCGAGTTAAAAGATATGTTTTCTCATTAAAATTTGTTTTAGGATATCTTTCATGATAATAAATAAATAAATTTAGAATGGCGTGCCAGCACCATCAATTTTCCAATCTTAAACGGAATCCAATCTGCTCGTCCTTATCCTTCCTTCCACCATAGGATTTATTTCATTTTCATGGCATTTCCAATAATTGAATTTCGATTCATGTTGATCTTTTTACGTAATTCCGCTGACATGCAGCAGTGGATCAGAGTCAACAATCCTTCGGCGATGGAAATTCTAAAGAAGTAGCCTTTTCTTCCCTTCATTTGCATTATTGCTTCGCAAATCAAATTACCTTGTTTATCATGGATTGTTGCCCTAGAATCATCCCCTCATTCCTTTGCCTCTTTCATCTCCTACTCTTGCTATGCTCTCTCGTTTCAGCTTCACCATCATCCCCTAATTATGGGTGTGAAAAAGTGTCTCTGGATGTTTACTATGAATCTCTCTGTCCGGACAGTGTGAAATTTATAGTGGACAATTTGATTGAGTTGTTTGAAGGTGACCTCCTCCCCATAGTTGATCTCAGATTCGTTCCTTACGGCAATGCAAGGCTCGATCGGAACAGTTCCATCACTTGTCAGGTCTGCCTCTACATCATCATACGTATTCTGTGTTTCTTTTGGAATGAAAATAGTTAGATTAAAAAAAAATTTATAAGGATTTCATTTCAACCTTAATTTGCTGGCCTAGGAAGACGGGTTATAGTTCGATTGCGTAATTAGAATAACCTGGGTTTTGGCTTTTGGTAGATATGATATGAGAGAGCTTAGACGACCTATAATTTCTTGATCCCATTTCGCCATTGTTGGCTATACCCTACCCAAAGAGCTTCCTTCACCCCCCCTAATGTATTTTTCTCTTTGCATTTTTGCCTTAACTACAGAACTCAAAATAAGAACAACCAGCCACCACATTTAAACCACCCATTTAAATGCTAAAGGAATTCTTTCTCTTGGACGAAATGCTAAAGGATAATACCCCAAAACAACAAAAGTTAGATTTTTTGGTCATTCATTGAATGATAAATACGCCATTCTCATTATCAGCTATTCTTTTAAGCTCTTTGTGAAGCCTTGTTTGAATTAACACACCTTGTTCTATGAGGAATTGAGGAATCTGCCTTGCAATTCCTTTTCCTTAAGACGTGGCTGGGGAGGAGGGAGCAAGGCTTTGTCCCTTAAAAATTCAAGAGATTTCTTCATGTTCTTGGTTCTTTCGTTTATTAACTTCCATTGATTTTGTATTCTTTCATAGTTTTCCGTTCCATTTCAAGTTGACATTTTGTTTTGCCTTTCTCAGGCTTAATTCTGGAAAACCTAGTAATCAGACAACGTGCATACACATGTATGAAAATACTTTGCATATATGGTGGCTGATGAACTTGCATTTTGTGGTGTTGATTTCAGCATGGGCCAAATGAATGTCTCCTGAACACTGTGGAAGCCTGCGCCATTCATGTCTGGCCTGATCTGGTAAGTCTCGTGATGAGAGACCTGAATCGTCATCTGCTCAGATTGCTTCTGGCATTTGTTACCTGTTTTCTCCTTTCTCAGTTAATTTATCTGACATTCAACCATGAAACTATTCATATCAAAATTACTTTGTGGATGTAGTAGACAGGGGCCACAGGGCATTTCCCTTTTATTTACTGTGTTGGGACTCTGGTGTACGAGCGGAAGTATACCCAATGGAAGACTTGCTTCGAGAAATTAGGATTGAATTCTAAGCCTATTTCTGATTGCTATTCTTCTGGGCTTGGGAAAGAGGTGAGTCACTAAAACTAAAACTAACTCAAGTAAGGTTATACTTTGTTGTTTCCTCAATTGCCCCTTTGTGAAAATTATTATATTCTTATGCTGTGAGCGTTAAATCAATGGCAACTCGATAAAGTAGCTAAATCTATAGAGGATTGACTCTGTTCATGACCAGAGTGATCATTTCCATGCAGCTTGAACTACAATATGCAGCTGAAACCAACAATCTTCAGCCTCCTCATAAATACGTTCCTTGGGTGGTTGTTGACGGACAACCACTTTATGAGGTTTGTCTTTTTCAATATATTCACTCTCACATCCAAACACACTAAAAATTGAATCATGGGCATGTTGATTCTCACAGTGTGATGATTGGTCAATACATAGTTTAAGCATTTTCATATATCCGAAGCCTCTTGAGGGTTGACTTAATTTCATGTTTGTGCAGGATTATGAAAACTTTGTCAGTTACATCTGTGCGGCGTATAAAGGTTCTGCCGTGCCAACAGCTTGTAGAGCTAAATCCTTTAGTGGCATTTAAAAAAGGAAAGTTCAAAATATGCTTTGGAGAATAAGATAATGCTGTTGGTTTTAATTTGAATAATAATAGCATTATTTGTTTTGTTTTGTTTTTTATATGGAGTGACATAAGAATTTAATTAAACTGATATTTTGTTGGAGTATGTTGACAAATAAAGTTAGTATTGGAGACAGCTTTTGTGGCGTTGACG AAGCACCCTAATTGATTGGTGAGGCTTCAAAAAAGATTGTAAGTAGGTTAGTTTTAGTGATGTTAAATTTTGGGAAAAATTTCTCGGATACTAAAAGATGCAAATAATGGTTAATCAAAAGCGAGTATAGGTGAATGCACAACGAAAAAGAGAGTTCATATGCTATGCTTGGGTTCTCAAAGTCTGAGTTATTGAGAGTGATTTTGGATGGAAAGATATAAATTGTCGTATAAGAAGATAAGTTATAGTTCTAAGAAAATAAAATTGGAACAAATAACAGGAAGGAGGAGCTAATGGGGCGAAGGAGAGAGTTGAAGTTGGATTTTGGGTAAAGCAGTGTGCTCAGCCTCAACCGATGTACCCTAATCAACTTAGGGAATGTATGTATATGTAGAAGTAAATTCATCCTTCTTCTCAAATCTTGTAGTTTCTATAGTTTCCACCTTTGATTCGAGTTAAAAGATATGTTTTCTCATTAAAATTTGTTTTAGGATATCTTTCATGATAATAAATAAATAAATTTAGAATGGCGTGCCAGCACCATCAATTTTCCAATCTTAAACGGAATCCAATCTGCTCGTCCTTATCCTTCCTTCCACCATAGGATTTATTTCATTTTCATGGCATTTCCAATAATTGAATTTCGATTCATGTTGATCTTTTTACGTAATTCCGCTGACATGCAGCAGTGGATCAGAGTCAACAATCCTTCGGCGATGGAAATTCTAAAGAAGTAGCCTTTTCTTCCCTTCATTTGCATTATTGCTTCGCAAATCAAATTACCTTGTTTATCATGGATTGTTGCCCTAGAATCATCCCCTCATTCCTTTGCCTCTTTCATCTCCTACTCTTGCTATGCTCTCTCGTTTCAGCTTCACCATCATCCCCTAATTATGGGTGTGAAAAAGTGTCTCTGGATGTTTACTATGAATCTCTCTGTCCGGACAGTGTGAAATTTATAGTGGACAATTTGATTGAGTTGTTTGAAGGTGACCTCCTCCCCATAGTTGATCTCAGATTCGTTCCTTACGGCAATGCAAGGCTCGATCGGAACAGTTCCATCACTTGTCAGCATGGGCCAAATGAATGTCTCCTGAACACTGTGGAAGCCTGCGCCATTCATGTCTGGCCTGATCTGACAGGGGCCACAGGGCATTTCCCTTTTATTTACTGTGTTGGGACTCTGGTGTACGAGCGGAAGTATACCCAATGGAAGACTTGCTTCGAGAAATTAGGATTGAATTCTAAGCCTATTTCTGATTGCTATTCTTCTGGGCTTGGGAAAGAGCTTGAACTACAATATGCAGCTGAAACCAACAATCTTCAGCCTCCTCATAAATACGTTCCTTGGGTGGTTGTTGACGGACAACCACTTTATGAGGATTATGAAAACTTTGTCAGTTACATCTGTGCGGCGTATAAAGGTTCTGCCGTGCCAACAGCTTGTAGAGCTAAATCCTTTAGTGGCATTTAAAAAAGGAAAGTTCAAAATATGCTTTGGAGAATAAGATAATGCTGTTGGTTTTAATTTGAATAATAATAGCATTATTTGTTTTGTTTTGTTTTTTATATGGAGTGACATAAGAATTTAATTAAACTGATATTTTGTTGGAGTATGTTGACAAATAAAGTTAGTATTGGAGACAGCTTTTGTGGCGTTGACG ATGGATTGTTGCCCTAGAATCATCCCCTCATTCCTTTGCCTCTTTCATCTCCTACTCTTGCTATGCTCTCTCGTTTCAGCTTCACCATCATCCCCTAATTATGGGTGTGAAAAAGTGTCTCTGGATGTTTACTATGAATCTCTCTGTCCGGACAGTGTGAAATTTATAGTGGACAATTTGATTGAGTTGTTTGAAGGTGACCTCCTCCCCATAGTTGATCTCAGATTCGTTCCTTACGGCAATGCAAGGCTCGATCGGAACAGTTCCATCACTTGTCAGCATGGGCCAAATGAATGTCTCCTGAACACTGTGGAAGCCTGCGCCATTCATGTCTGGCCTGATCTGACAGGGGCCACAGGGCATTTCCCTTTTATTTACTGTGTTGGGACTCTGGTGTACGAGCGGAAGTATACCCAATGGAAGACTTGCTTCGAGAAATTAGGATTGAATTCTAAGCCTATTTCTGATTGCTATTCTTCTGGGCTTGGGAAAGAGCTTGAACTACAATATGCAGCTGAAACCAACAATCTTCAGCCTCCTCATAAATACGTTCCTTGGGTGGTTGTTGACGGACAACCACTTTATGAGGATTATGAAAACTTTGTCAGTTACATCTGTGCGGCGTATAAAGGTTCTGCCGTGCCAACAGCTTGTAGAGCTAAATCCTTTAGTGGCATTTAA MDCCPRIIPSFLCLFHLLLLLCSLVSASPSSPNYGCEKVSLDVYYESLCPDSVKFIVDNLIELFEGDLLPIVDLRFVPYGNARLDRNSSITCQHGPNECLLNTVEACAIHVWPDLTGATGHFPFIYCVGTLVYERKYTQWKTCFEKLGLNSKPISDCYSSGLGKELELQYAAETNNLQPPHKYVPWVVVDGQPLYEDYENFVSYICAAYKGSAVPTACRAKSFSGI Homology
BLAST of IVF0006510.1 vs. ExPASy Swiss-Prot
Match: Q9SV73 (Gamma-interferon-responsive lysosomal thiol protein OS=Arabidopsis thaliana OX=3702 GN=GILT PE=2 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 4.0e-42 Identity = 84/189 (44.44%), Postives = 119/189 (62.96%), Query Frame = 0
BLAST of IVF0006510.1 vs. ExPASy Swiss-Prot
Match: A6QPN6 (Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus OX=9913 GN=IFI30 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 9.3e-23 Identity = 72/201 (35.82%), Postives = 107/201 (53.23%), Query Frame = 0
BLAST of IVF0006510.1 vs. ExPASy Swiss-Prot
Match: Q499T2 (Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus norvegicus OX=10116 GN=Ifi30 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.5e-20 Identity = 76/213 (35.68%), Postives = 108/213 (50.70%), Query Frame = 0
BLAST of IVF0006510.1 vs. ExPASy Swiss-Prot
Match: O17861 (GILT-like protein F37H8.5 OS=Caenorhabditis elegans OX=6239 GN=F37H8.5 PE=1 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.3e-20 Identity = 58/193 (30.05%), Postives = 96/193 (49.74%), Query Frame = 0
BLAST of IVF0006510.1 vs. ExPASy Swiss-Prot
Match: Q9ESY9 (Gamma-interferon-inducible lysosomal thiol reductase OS=Mus musculus OX=10090 GN=Ifi30 PE=1 SV=3) HSP 1 Score: 97.8 bits (242), Expect = 1.6e-19 Identity = 65/186 (34.95%), Postives = 96/186 (51.61%), Query Frame = 0
BLAST of IVF0006510.1 vs. ExPASy TrEMBL
Match: A0A1S3C5X1 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucumis melo OX=3656 GN=LOC103497041 PE=3 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 6.7e-133 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of IVF0006510.1 vs. ExPASy TrEMBL
Match: A0A0A0LVM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533550 PE=3 SV=1) HSP 1 Score: 454.5 bits (1168), Expect = 2.5e-124 Identity = 212/226 (93.81%), Postives = 216/226 (95.58%), Query Frame = 0
BLAST of IVF0006510.1 vs. ExPASy TrEMBL
Match: A0A5A7UVV2 (Gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00640 PE=3 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 3.0e-117 Identity = 200/203 (98.52%), Postives = 201/203 (99.01%), Query Frame = 0
BLAST of IVF0006510.1 vs. ExPASy TrEMBL
Match: A0A6J1KC63 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111492992 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 6.5e-104 Identity = 189/231 (81.82%), Postives = 204/231 (88.31%), Query Frame = 0
BLAST of IVF0006510.1 vs. ExPASy TrEMBL
Match: A0A6J1GC05 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111452764 PE=3 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 5.5e-103 Identity = 189/231 (81.82%), Postives = 202/231 (87.45%), Query Frame = 0
BLAST of IVF0006510.1 vs. NCBI nr
Match: XP_008457320.1 (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like [Cucumis melo]) HSP 1 Score: 478 bits (1231), Expect = 1.06e-170 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of IVF0006510.1 vs. NCBI nr
Match: XP_004145239.1 (gamma-interferon-responsive lysosomal thiol protein [Cucumis sativus] >KGN65848.1 hypothetical protein Csa_023265 [Cucumis sativus]) HSP 1 Score: 450 bits (1157), Expect = 2.03e-159 Identity = 212/226 (93.81%), Postives = 216/226 (95.58%), Query Frame = 0
BLAST of IVF0006510.1 vs. NCBI nr
Match: KAA0060012.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucumis melo var. makuwa] >TYJ97270.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucumis melo var. makuwa]) HSP 1 Score: 427 bits (1098), Expect = 5.52e-150 Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of IVF0006510.1 vs. NCBI nr
Match: XP_038894278.1 (gamma-interferon-responsive lysosomal thiol protein-like [Benincasa hispida]) HSP 1 Score: 393 bits (1010), Expect = 4.36e-137 Identity = 192/226 (84.96%), Postives = 203/226 (89.82%), Query Frame = 0
BLAST of IVF0006510.1 vs. NCBI nr
Match: XP_022998319.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998320.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998321.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998322.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima]) HSP 1 Score: 382 bits (981), Expect = 1.42e-132 Identity = 189/231 (81.82%), Postives = 204/231 (88.31%), Query Frame = 0
BLAST of IVF0006510.1 vs. TAIR 10
Match: AT1G07080.1 (Thioredoxin superfamily protein ) HSP 1 Score: 258.1 bits (658), Expect = 6.7e-69 Identity = 126/214 (58.88%), Postives = 151/214 (70.56%), Query Frame = 0
BLAST of IVF0006510.1 vs. TAIR 10
Match: AT5G01580.1 (gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 195.7 bits (496), Expect = 4.1e-50 Identity = 96/208 (46.15%), Postives = 133/208 (63.94%), Query Frame = 0
BLAST of IVF0006510.1 vs. TAIR 10
Match: AT4G12890.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 183.0 bits (463), Expect = 2.8e-46 Identity = 92/210 (43.81%), Postives = 129/210 (61.43%), Query Frame = 0
BLAST of IVF0006510.1 vs. TAIR 10
Match: AT4G12900.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 180.6 bits (457), Expect = 1.4e-45 Identity = 87/189 (46.03%), Postives = 121/189 (64.02%), Query Frame = 0
BLAST of IVF0006510.1 vs. TAIR 10
Match: AT4G12960.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 172.9 bits (437), Expect = 2.8e-43 Identity = 84/189 (44.44%), Postives = 119/189 (62.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|