IVF0003309.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0003309.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	SGF29 C-terminal domain-containing protein
Location	chr04: 25284783 .. 25289442 (+)
Sequence length	1242
RNA-Seq Expression	IVF0003309.1
Synteny	IVF0003309.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATAATTTTCAGTTGGAAAATAAAAAAGGGCATTGGATGGGAAACCCATAAGCCCATTTTTCAGGTTGATTTTCAATTTTCAATTTTCAATTTTTTGTTTTCTTCCTTCAACAAATTTGGTTGTCATCCCTGGAACAAATTCCCAGCTTCCATCACTGAGCAATGTCGTCCTTCGACATTGACGGAATTTTGGGTAACACGAAGGAGCTCGATCGCTTACGCAAGGAGCAGGAAGTTGTTGTTCTTGAAATTAACAAGATGCACAAGAAACTCCTCGCTAGTGAGTATTCTTTCATTCTTGAACCTTTTGATTGGATCATGTTTTTTCTTTTTTTCTTTTGAGATCATGCTCCTAGGAATTGGCCAAAAGTGAGTATTCTTTCATTCTTAAACCTTTTGATTGGATCATGTTTTTTCTTTTTCTTTCGAGATCATGCTCCCAGGAATTGGCCAAAATGTTCGACTCTTGTTGGTCTGCTGCTTGTTTAATTAGTTTCCTTAGTAGTTTCATTAGTGGACGAAGAAGCAACGGTTGAAATTTGGATGAGGTGATAGTATTTTGGAATTTTAACGAGTTTGGTTTTTTAATCTTTTTTCCTTTTTTGGGAACAATAGTTGAGGTTGAGTTTAATTAAGTGTTTGGCGAGAGGTTTCTGTAAAATTTTGAGCTTGTTTCTGAATGTCCGACATTTATATGAAGCTGGAAGATGAGGATGATACCTCTGCAATTTTAATTGGTTTTGGATTGCTACCTAAAACAAAGAAGTATATAACATTCGGGAGTTTATCAATTTGCTTTCTTTCTGATGCTTTTAGAGCGTTTTATTTTCTATTAGTACTTCCATCTAATTTCCGTTAGTAATTGGCTTTCTCCTTAATATTTGTTTGTTTGCAGCTCCTAAAGTGGTTGAGAAGCCTGGGGATAATTCATTGTCAAAATTGAAGCATTTATATACTCAAGCAAAACAACTTTCAGAGGATGAAGTGAGGTAGTTTCTCTTTTCTTATATGAAATTCATACTTCACAGTTTGTTTACTTTTGTTTTATTATTTCTTTTTTTGTCCATTTGTGTGTGATTAGATACATATAGGTAAAAAATCATTTCTCTACCCCAAGTATGCTTGGATCATCTATTGTAACTAGCATTGAAGTCCATATTATTTTTTATTGCAGTGTTTCCACGACCTTATTGGGGCAACTTGAAACCTTGCTGCCCGGACCTGTGCAACAAAGGAGAAAGATAGGTGTTTCCAAGAATTATTCAACTATACTGTGTTTTACTGATAACTTCCAATAAGCTTTCTGATTCAGGCTATCATAAATGATAAATAAATGATAAATTTGAAGATATGTTATACGCATGATCATGAAAGGAAACTCAACAATATTTTCTTCTACTTCATGAGGGAGTATTACTACTTGGATTAACCACAGGACATGACTTATATGTGTTCTCAGAAAAATAATCATAACCAATAGAAGGGTCACGTTAACAAATATCACAATGGATTGATGATAAGGACCTAAGAGATAATGAGCTCATTCCATGGTAGTCACTTACCTAGAATTTAGTATCTTTCAAGTAGTCTTGACATCCAAACGTGGTCGGGTCAGGTGGGTTGTCCCATAAAATTAGTCGAGATGCATGTAAGGTGTCTTAGACACTCACGAATATTAAAGTGGAGATGATGGGATTGATGTTGATTTTATTGGAAACTTAATATGAATACTAGTTGTCTTTTCTTTCCTTTGTTATTCCTGAGTTTGAAGCTTTCTGCATGTGGGTATGAGTATGTCTATGTTGCTGCATATGGATCATAGGAGAAAGGACATTGACTTTTTTATTTGTTTGCTCAATATATTTTCTCACCTTGGAGGCACCATGGGAGAGGATCTTCTAGAATGGCATTAGATTTACTTATACGACTGCTGTCAGATTTGACTACTTATGGCTGTCAGATTTAAAACAATCATTAATTCCTTACCATCTTTTCCCTTATTAGCAAATTTATAACTGCTGCCTCTCTTGTTAAAATTTTAAAGACAATGTCATGAAGCAATTATCTGTTGATTTACTGATTTGAATCTATGTGGCAGATAAGAAAAGAATGAAGGCAGATTCAGACAATGCTCGTAGTTCACCTGCAATGAGAAACCTCGAGGCTTGTGCTAACATGAAAGATGAACAGGTCTGTATATCATTTTCCAGTTTGCATTTTTTATTTATTCATATTTTCCAAATTTAAACAGACCAAAAACAATTCAATTGCTTTGATTAATTTCAGTAAAGATAGCTATTTAGTAGCATCTACTGTTATATTCAGGTGGCAGCCAGGGTGACACCAGATGGGGCTGAGAAGGACGAATGGTTTATTGTAAAAGTGATACATTTTGACAAGGAGACAAAACTGTGAGTTAAATTATATTTATAAGTTCTTAACAGCATTTTTTCTTCTTTTCGGTGATGGAATTATTTGTGTGCAGGAAGTTAAGTTGAATTATTATTTTTATTTGAAAAGAGGATAAAAAAAACTGATTAGTGGGGTATCTTTCATGGAAAACTCAGATCTCATCATGCCCATTTATTGAAGGTCACATATCAATGTTACCTTCTTACACGCTTCTGCAATATGAATAAGTGACTAGTGTCTCCGCGCCAGTTTCCCTTAATTGTGGAGACGGACTTGGCAGCTCGATGTTATTAACTTATGCATTTCGGTTATGCTACTTGCTTTGTCATTCATTATTGTTTTACGTATTTGATTATGTGTACAGATTTGAGATCTGTTTTTAGCATCATTTGTGAATTTTTAGACCTAGTCAAATCATTTAACACATGCTTAATTGTTATAATCTCTCTTAGATGATATCCTTTTGAAAAGGATTTTCTATACTTCGTTGTTTAATATGTAAAATCTACATGTACAGATTTGAAGTACTAGATGAGGAGCCAGGCGATGAAGATGAAGGTGGAGGGCAAAGGTAAATTTCTGCCCCTGTTAGATTTTTATTTGTTTATCATTTTGCTCGGAATGGATTCTAGAGTTCTAGTTAATTGGAAGTTTCTTCATTCAGTTATGTTTAATTCTATCATATTCAGAAAATACAAGTTGCCAATGTCGGCCATCATATCTTTTCCAAAACGAAACGATCCTTCTACTGTCCCTGAATTCCTACCTGGAAGACGAGTCTTAGCAGTTTATCCAGGAACAACCGCTCTTTATAGGGCAACAGTTGTCAATAGTCATCGCAAGGTCATCATCTCATCCCTACACCTTGTTCTACTATATATACACCAAACTATCTCGATTCTCTTGATGTAAATCTAGACTGTGTTAGCATACATTATACTTATTTATTCTATGTGCAACTTACTGACAAGTAAATTTCTCTTGCAACGAACGGCCTCCTTCCAGAGGAAGACAGACGAGTAAGTACCTCGTATTCTTTTAAGGTTTATCATGTCGTTTCTACTTTGAGCTCTGTTTGTTACCTCTACGGCGACTACGGATTTTGATCCCTTTAACCTCTCATGTAAAATAGTATCTCCTAGACCCTGACTGGCAACGAAATATGGGGGGAAAAATTGACCTTTTCTGCTCTCCATTTTGATCTCTTACAAAGTATAGATGGATGGGTTCAATCAGGCTTTCATTAGAACTTATTTTCTTCATGTTAGAACTCGTTTGTCCCAAATGCACTATGACCTGATCTGCAGCGGTTATTGTGCAGCCATGAGCTTTTTGGGTGAACTTGGGACAACTTTAAGAAGTGGAAAAAGTTTTTTTATTCCATAACAATCAACTTTTGAAATAAGAAAAAAAAAAAAATTAAAGAAACGTTGAAATAAAAATCATTTTAAGAAATGCATACATCTACCAAATGTGCTTGTGAAAGAAGTGCTTTCAAACTATTTTCACGGTTTTCGTTAGTTGTTCTTATATAGTTTCCAATTAAAAATCTCTATTGTAGTTGCTTGTAGGAGTTTGAGGTTTCCCCTTACTTAAAAAAAGTGTTTCTCATCTAAAAAAAAGCCGAATTTCACCAGATGGTTCAATGTGGTTTGATTTCTCTGTTTTATGTTTGTTTCCATCAGTTTTTGATGACCGACTGCGTCCGAAATTTCAATTCGTTTATTTTTCATGACAATTTTCCATGTCAAATAACATGATCTATCCATTCTTCGATATAATGACAACATGAATTCCAAGAAACTGATCTGCTGTACATTTCAAATTCATTCTTACGTTTTGTCTGGACAGCTACTTGTTGGAATTCGACGACGACGAGGAAGACGGGTCCTCGACATTGCCCCAGAGAACAGTACCCTTCCATAAGGTGGTGGCCTTGCCTGAAGGACTTCGCCAGTAAGCTCCCTGTGTTTATATTGTGAATAAAATATAAGGTTGTATGTAAATCGTAGACCAAAAAAGAATCTACTTAATTTGTCTTTAAATTTGAGAGATGATAATGTGTATTGAGTACCTTCACACTTTGCCTTATTAAGCTCTAACAATGGTGAGGTAATTCCCTGATACATAATTAATTATTGGTGTGATCCTTTTTAGTAGTTGAAGGAATCCCAATAATATATCAATCATGTGTGGATGTTCTCTAAATTATAACAATAATAACATCTTGTTTTTCATATGCCAT

mRNA sequence

AAAAATAATTTTCAGTTGGAAAATAAAAAAGGGCATTGGATGGGAAACCCATAAGCCCATTTTTCAGGTTGATTTTCAATTTTCAATTTTCAATTTTTTGTTTTCTTCCTTCAACAAATTTGGTTGTCATCCCTGGAACAAATTCCCAGCTTCCATCACTGAGCAATGTCGTCCTTCGACATTGACGGAATTTTGGGTAACACGAAGGAGCTCGATCGCTTACGCAAGGAGCAGGAAGTTGTTGTTCTTGAAATTAACAAGATGCACAAGAAACTCCTCGCTACTCCTAAAGTGGTTGAGAAGCCTGGGGATAATTCATTGTCAAAATTGAAGCATTTATATACTCAAGCAAAACAACTTTCAGAGGATGAAGTGAGTGTTTCCACGACCTTATTGGGGCAACTTGAAACCTTGCTGCCCGGACCTGTGCAACAAAGGAGAAAGATAGATAAGAAAAGAATGAAGGCAGATTCAGACAATGCTCGTAGTTCACCTGCAATGAGAAACCTCGAGGCTTGTGCTAACATGAAAGATGAACAGGTGGCAGCCAGGGTGACACCAGATGGGGCTGAGAAGGACGAATGGTTTATTGTAAAAGTGATACATTTTGACAAGGAGACAAAACTATTTGAAGTACTAGATGAGGAGCCAGGCGATGAAGATGAAGGTGGAGGGCAAAGAAAATACAAGTTGCCAATGTCGGCCATCATATCTTTTCCAAAACGAAACGATCCTTCTACTGTCCCTGAATTCCTACCTGGAAGACGAGTCTTAGCAGTTTATCCAGGAACAACCGCTCTTTATAGGGCAACAGTTGTCAATAGTCATCGCAAGAGGAAGACAGACGACTACTTGTTGGAATTCGACGACGACGAGGAAGACGGGTCCTCGACATTGCCCCAGAGAACAGTACCCTTCCATAAGGTGGTGGCCTTGCCTGAAGGACTTCGCCAGTAAGCTCCCTGTGTTTATATTGTGAATAAAATATAAGGTTGTATGTAAATCGTAGACCAAAAAAGAATCTACTTAATTTGTCTTTAAATTTGAGAGATGATAATGTGTATTGAGTACCTTCACACTTTGCCTTATTAAGCTCTAACAATGGTGAGGTAATTCCCTGATACATAATTAATTATTGGTGTGATCCTTTTTAGTAGTTGAAGGAATCCCAATAATATATCAATCATGTGTGGATGTTCTCTAAATTATAACAATAATAACATCTTGTTTTTCATATGCCAT

Coding sequence (CDS)

ATGTCGTCCTTCGACATTGACGGAATTTTGGGTAACACGAAGGAGCTCGATCGCTTACGCAAGGAGCAGGAAGTTGTTGTTCTTGAAATTAACAAGATGCACAAGAAACTCCTCGCTACTCCTAAAGTGGTTGAGAAGCCTGGGGATAATTCATTGTCAAAATTGAAGCATTTATATACTCAAGCAAAACAACTTTCAGAGGATGAAGTGAGTGTTTCCACGACCTTATTGGGGCAACTTGAAACCTTGCTGCCCGGACCTGTGCAACAAAGGAGAAAGATAGATAAGAAAAGAATGAAGGCAGATTCAGACAATGCTCGTAGTTCACCTGCAATGAGAAACCTCGAGGCTTGTGCTAACATGAAAGATGAACAGGTGGCAGCCAGGGTGACACCAGATGGGGCTGAGAAGGACGAATGGTTTATTGTAAAAGTGATACATTTTGACAAGGAGACAAAACTATTTGAAGTACTAGATGAGGAGCCAGGCGATGAAGATGAAGGTGGAGGGCAAAGAAAATACAAGTTGCCAATGTCGGCCATCATATCTTTTCCAAAACGAAACGATCCTTCTACTGTCCCTGAATTCCTACCTGGAAGACGAGTCTTAGCAGTTTATCCAGGAACAACCGCTCTTTATAGGGCAACAGTTGTCAATAGTCATCGCAAGAGGAAGACAGACGACTACTTGTTGGAATTCGACGACGACGAGGAAGACGGGTCCTCGACATTGCCCCAGAGAACAGTACCCTTCCATAAGGTGGTGGCCTTGCCTGAAGGACTTCGCCAGTAA

Protein sequence

MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYTQAKQLSEDEVSVSTTLLGQLETLLPGPVQQRRKIDKKRMKADSDNARSSPAMRNLEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLPMSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDEEDGSSTLPQRTVPFHKVVALPEGLRQ

Homology

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BLAST of IVF0003309.1 vs. ExPASy Swiss-Prot
Match: Q8RXY6 (SAGA-associated factor 29 homolog A OS=Arabidopsis thaliana OX=3702 GN=SGF29A PE=1 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 9.9e-101
Identity = 196/270 (72.59%), Postives = 229/270 (84.81%), Query Frame = 0


Query: 2   SSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYTQ 61
           SS DI GIL NTKELDRLRKEQE V++EINKMHKKL ATP++VEKPGD SLSKLK+LY Q
Sbjct: 3   SSPDIAGILDNTKELDRLRKEQEEVLVEINKMHKKLQATPEIVEKPGDISLSKLKNLYIQ 62

Query: 62  AKQLSEDEVSVSTTLLGQLETLLP-GPV-QQRRKID-----KKRMKADSDNARSSPAMRN 121
           AK+LSE EV+VS  LL QL++LLP GP  QQRRK++     +KRMK D+D  R SP+MRN
Sbjct: 63  AKELSESEVTVSNILLTQLDSLLPSGPTGQQRRKLEGNEQKRKRMKVDTDVTRVSPSMRN 122

Query: 122 -LEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRK 181
            +EA A++K EQVAARVT + AEKDEWF+VKVIHFD+ETK  EVLDEEPGD++EGGGQR 
Sbjct: 123 QIEAYASLKGEQVAARVTAEDAEKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEGGGQRT 182

Query: 182 YKLPMSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEF 241
           YKL MS I+ FPKRNDPS+  EF+PG+ VLAVYPGTTALY+ATV+++ RKRK+D+YLLEF
Sbjct: 183 YKLSMSCILPFPKRNDPSSTQEFIPGKHVLAVYPGTTALYKATVISTPRKRKSDEYLLEF 242

Query: 242 DDDEEDGSSTLPQRTVPFHKVVALPEGLRQ 264
           DDDEEDG+  LPQRTVPFHKVVALPEG RQ
Sbjct: 243 DDDEEDGA--LPQRTVPFHKVVALPEGHRQ 270

[Close]

BLAST of IVF0003309.1 vs. ExPASy Swiss-Prot
Match: Q500Z7 (SAGA-associated factor 29 homolog B OS=Arabidopsis thaliana OX=3702 GN=SGF29B PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 6.0e-98
Identity = 194/275 (70.55%), Postives = 226/275 (82.18%), Query Frame = 0


Query: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS DI GIL NTKELDRLRK+QE V++EINKMHKKL A+P++VEKPGD SL+KLK+LY 
Sbjct: 1   MSSPDIVGILENTKELDRLRKDQEEVLVEINKMHKKLQASPEIVEKPGDISLAKLKNLYI 60

Query: 61  QAKQLSEDEVSVSTTLLGQLETLLP-GPV-QQRRKI---------DKKRMKADSDNARSS 120
           QAK+LSE+EV+VS  LL QL+ LLP GP  QQRRK+          +KRMK DSD  R S
Sbjct: 61  QAKELSENEVTVSNILLTQLDLLLPYGPTGQQRRKLGVVAEGNDQKRKRMKVDSDVIRLS 120

Query: 121 PAMRN-LEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEG 180
           P+MRN +EA A++K EQVAARVT + A+KDEWF+VKVIHFD+ETK  EVLDEEPGD++EG
Sbjct: 121 PSMRNQIEAYASLKGEQVAARVTAESADKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEG 180

Query: 181 GGQRKYKLPMSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDD 240
            GQR YKLPM  I+ FPKRNDPS   EF PG+ VLAVYPGTTALY+ATVV++ RKRK+D+
Sbjct: 181 SGQRTYKLPMLCILPFPKRNDPSNTQEFPPGKHVLAVYPGTTALYKATVVSTPRKRKSDE 240

Query: 241 YLLEFDDDEEDGSSTLPQRTVPFHKVVALPEGLRQ 264
           YLLEFDDDEEDG+  LPQRTVPFHKVVALPEG RQ
Sbjct: 241 YLLEFDDDEEDGA--LPQRTVPFHKVVALPEGHRQ 273

[Close]

BLAST of IVF0003309.1 vs. ExPASy Swiss-Prot
Match: Q5ZL38 (SAGA-associated factor 29 OS=Gallus gallus OX=9031 GN=SGF29 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.9e-07
Identity = 75/292 (25.68%), Postives = 128/292 (43.84%), Query Frame = 0


Query: 5   DIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYTQAKQ 64
           ++  +LG+T+E +R R E  ++   I K H+++    K+         +KL+ LYT AK 
Sbjct: 16  ELQRLLGHTQE-ERSRSEHNLI--NIQKTHERMQTENKI----SPYYRTKLRGLYTTAKA 75

Query: 65  LSEDEVSVSTTLLGQLETLLPGPVQQRRKIDKKRMKADSDNARSS--------------- 124
            +E E ++    L ++  +     ++R       + +D++  R +               
Sbjct: 76  DAEAECNILRKALDKIAEIKSLLEERRIAAKIAGIYSDAEPPRKTMRRGVLMTLLQQSAM 135

Query: 125 --------PAMRNLEACANM---------KDEQVAARV-TPDGAEKDEWFIVKVIHFDKE 184
                   P  +    C  M           ++VAARV   DG E  +W + +V+ +   
Sbjct: 136 TLPLWIGKPGDKPPPLCGAMPAAGDYVAKPGDKVAARVKAVDGDE--QWILAEVVSYSHA 195

Query: 185 TKLFEVLDEEPGDEDEGGGQRKYKLPMSAIISFPK-RNDPSTVPEFLPGRR--VLAVYPG 244
              +EV      D+ +  G+ ++ L    +I  P+ + +P T PE L  R   VLA+YP 
Sbjct: 196 ANKYEV------DDIDEEGKERHTLSRRRVIPLPQWKANPETDPEALFQREQLVLALYPQ 255

Query: 245 TTALYRATVVNSHRKRKTDDYLLEFDDDE-EDGSSTLPQRTVPFHKVVALPE 260
           TT  YRA ++++  +R  DDY + F+D    DG S  P   V    VVA  E
Sbjct: 256 TTCFYRA-LIHAPPQRPQDDYSVLFEDTSYADGYS--PPLNVAQRYVVACKE 289

[Close]

BLAST of IVF0003309.1 vs. ExPASy Swiss-Prot
Match: Q96ES7 (SAGA-associated factor 29 OS=Homo sapiens OX=9606 GN=SGF29 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.2e-06
Identity = 71/283 (25.09%), Postives = 119/283 (42.05%), Query Frame = 0


Query: 14  KELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYTQAKQLSEDEVSVS 73
           K+    R   E  ++ I K H+++    K+         +KL+ LYT AK  +E E ++ 
Sbjct: 22  KQTQEERSRSEHNLVNIQKTHERMQTENKI----SPYYRTKLRGLYTTAKADAEAECNIL 81

Query: 74  TTLLGQLETLLPGPVQQRRKIDKKRMKADSDNARSS-----------------------P 133
              L ++  +     ++R       +  DS+  R +                       P
Sbjct: 82  RKALDKIAEIKSLLEERRIAAKIAGLYNDSEPPRKTMRRGVLMTLLQQSAMTLPLWIGKP 141

Query: 134 AMRNLEACANM---------KDEQVAARV-TPDGAEKDEWFIVKVIHFDKETKLFEVLDE 193
             +    C  +           ++VAARV   DG E  +W + +V+ +   T  +EV   
Sbjct: 142 GDKPPPLCGAIPASGDYVARPGDKVAARVKAVDGDE--QWILAEVVSYSHATNKYEV--- 201

Query: 194 EPGDEDEGGGQRKYKLPMSAIISFPK-RNDPSTVPE--FLPGRRVLAVYPGTTALYRATV 253
              D+ +  G+ ++ L    +I  P+ + +P T PE  F   + VLA+YP TT  YRA +
Sbjct: 202 ---DDIDEEGKERHTLSRRRVIPLPQWKANPETDPEALFQKEQLVLALYPQTTCFYRA-L 261

Query: 254 VNSHRKRKTDDYLLEFDDDE-EDGSSTLPQRTVPFHKVVALPE 260
           +++  +R  DDY + F+D    DG S  P   V    VVA  E
Sbjct: 262 IHAPPQRPQDDYSVLFEDTSYADGYS--PPLNVAQRYVVACKE 289

[Close]

BLAST of IVF0003309.1 vs. ExPASy Swiss-Prot
Match: Q9DA08 (SAGA-associated factor 29 OS=Mus musculus OX=10090 GN=Sgf29 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05
Identity = 72/283 (25.44%), Postives = 118/283 (41.70%), Query Frame = 0


Query: 14  KELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYTQAKQLSEDEVSVS 73
           K+    R   E  ++ I K H+++    K+         +KL+ LYT AK  +E E ++ 
Sbjct: 22  KQTQEERSRSEHNLVNIQKTHERMQTENKI----SPYYRTKLRGLYTTAKTDAEAECNIL 81

Query: 74  TTLLGQLETLLPGPVQQRRKIDKKRMKADSDNARSS-----------------------P 133
              L ++  +     ++R       +  DS+  R +                       P
Sbjct: 82  RKALDKIAEIKSLLEERRIAAKIAGLYNDSEPPRKTMRRGVLMTLLQQSAMTLPLWIGKP 141

Query: 134 AMRNLEACANM---------KDEQVAARVTPDGAEKDE-WFIVKVIHFDKETKLFEVLDE 193
             +    C  +           ++VAARV     E DE W + +V+ +   T  +EV   
Sbjct: 142 GDKPPPLCGAIPASGDYVAKPGDKVAARV--KAVEGDEQWILAEVVSYSHATNKYEV--- 201

Query: 194 EPGDEDEGGGQRKYKLPMSAIISFPK-RNDPSTVPE--FLPGRRVLAVYPGTTALYRATV 253
              D+ +  G+ ++ L    II  P+ + +P T PE  F   + VLA+YP TT  YRA +
Sbjct: 202 ---DDIDEEGKERHTLSRRRIIPLPQWKANPETDPEALFQKEQLVLALYPQTTCFYRA-L 261

Query: 254 VNSHRKRKTDDYLLEFDDDE-EDGSSTLPQRTVPFHKVVALPE 260
           +++  +R  DDY + F+D    DG S  P   V    VVA  E
Sbjct: 262 IHTPPQRPQDDYSVLFEDTSYADGYS--PPLNVAQRYVVACKE 289

[Close]

BLAST of IVF0003309.1 vs. ExPASy TrEMBL
Match: A0A1S3CML7 (uncharacterized protein LOC103502684 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502684 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 9.8e-144
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60

Query: 61  QAKQLSEDEVSVSTTLLGQLETLLPGPVQQRRKIDKKRMKADSDNARSSPAMRNLEACAN 120
           QAKQLSEDEVSVSTTLLGQLETLLPGPVQQRRKIDKKRMKADSDNARSSPAMRNLEACAN
Sbjct: 61  QAKQLSEDEVSVSTTLLGQLETLLPGPVQQRRKIDKKRMKADSDNARSSPAMRNLEACAN 120

Query: 121 MKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLPMSA 180
           MKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLPMSA
Sbjct: 121 MKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLPMSA 180

Query: 181 IISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDEEDG 240
           IISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDEEDG
Sbjct: 181 IISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDEEDG 240

Query: 241 SSTLPQRTVPFHKVVALPEGLRQ 264
           SSTLPQRTVPFHKVVALPEGLRQ
Sbjct: 241 SSTLPQRTVPFHKVVALPEGLRQ 263

[Close]

BLAST of IVF0003309.1 vs. ExPASy TrEMBL
Match: A0A5D3D5D4 (SAGA-associated factor 29-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00230 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 9.8e-144
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60

Query: 61  QAKQLSEDEVSVSTTLLGQLETLLPGPVQQRRKIDKKRMKADSDNARSSPAMRNLEACAN 120
           QAKQLSEDEVSVSTTLLGQLETLLPGPVQQRRKIDKKRMKADSDNARSSPAMRNLEACAN
Sbjct: 61  QAKQLSEDEVSVSTTLLGQLETLLPGPVQQRRKIDKKRMKADSDNARSSPAMRNLEACAN 120

Query: 121 MKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLPMSA 180
           MKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLPMSA
Sbjct: 121 MKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLPMSA 180

Query: 181 IISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDEEDG 240
           IISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDEEDG
Sbjct: 181 IISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDEEDG 240

Query: 241 SSTLPQRTVPFHKVVALPEGLRQ 264
           SSTLPQRTVPFHKVVALPEGLRQ
Sbjct: 241 SSTLPQRTVPFHKVVALPEGLRQ 263

[Close]

BLAST of IVF0003309.1 vs. ExPASy TrEMBL
Match: A0A6J1JQN7 (uncharacterized protein LOC111486624 OS=Cucurbita maxima OX=3661 GN=LOC111486624 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 4.6e-133
Identity = 250/266 (93.98%), Postives = 254/266 (95.49%), Query Frame = 0


Query: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS DIDGIL NTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 1   MSSLDIDGILVNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60

Query: 61  QAKQLSEDEVSVSTTLLGQLETLLPG--PVQQRRKIDK-KRMKADSDNARSSPAMRNLEA 120
           QAKQLSEDEVSVSTTLLGQLETLLP   P Q RR+I+K KRMKAD DNAR SPAMRNLEA
Sbjct: 61  QAKQLSEDEVSVSTTLLGQLETLLPAGPPGQPRRRIEKAKRMKADPDNARLSPAMRNLEA 120

Query: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180
           CAN+KDEQVAARVTPDGAEKDEWFIVKV+HFDKETKLFEVLDEEPGDEDEGGGQRKYKLP
Sbjct: 121 CANLKDEQVAARVTPDGAEKDEWFIVKVMHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180

Query: 181 MSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240
           MSAII FPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVN HRKRKTDDYLLEFDDDE
Sbjct: 181 MSAIIPFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNGHRKRKTDDYLLEFDDDE 240

Query: 241 EDGSSTLPQRTVPFHKVVALPEGLRQ 264
           EDGSSTLPQRTVPFHKVVALPEGLRQ
Sbjct: 241 EDGSSTLPQRTVPFHKVVALPEGLRQ 266

[Close]

BLAST of IVF0003309.1 vs. ExPASy TrEMBL
Match: A0A6J1EK50 (uncharacterized protein LOC111435081 OS=Cucurbita moschata OX=3662 GN=LOC111435081 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.0e-132
Identity = 249/266 (93.61%), Postives = 254/266 (95.49%), Query Frame = 0


Query: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS DIDGIL NTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 1   MSSLDIDGILVNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60

Query: 61  QAKQLSEDEVSVSTTLLGQLETLLPG--PVQQRRKIDK-KRMKADSDNARSSPAMRNLEA 120
           QAKQLSEDEVSVSTTLLGQLETLLP   P Q RR+I+K KRMKAD DNAR SPAMRNLEA
Sbjct: 61  QAKQLSEDEVSVSTTLLGQLETLLPAGPPGQPRRRIEKAKRMKADPDNARLSPAMRNLEA 120

Query: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180
           CAN+KDEQVAARVTPDGAEKDEWFIVKV+HFDKETKLFEVLDEEPGDEDEGGGQRKYKLP
Sbjct: 121 CANLKDEQVAARVTPDGAEKDEWFIVKVMHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180

Query: 181 MSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240
           MSAII FPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVN HRKRKTDDY+LEFDDDE
Sbjct: 181 MSAIIPFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNGHRKRKTDDYVLEFDDDE 240

Query: 241 EDGSSTLPQRTVPFHKVVALPEGLRQ 264
           EDGSSTLPQRTVPFHKVVALPEGLRQ
Sbjct: 241 EDGSSTLPQRTVPFHKVVALPEGLRQ 266

[Close]

BLAST of IVF0003309.1 vs. ExPASy TrEMBL
Match: A0A0A0LCH2 (SGF29 C-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G840410 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.7e-132
Identity = 249/266 (93.61%), Postives = 257/266 (96.62%), Query Frame = 0


Query: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS DI+GILG+TKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 68  MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 127

Query: 61  QAKQLSEDEVSVSTTLLGQLETLLP-GPV-QQRRKIDK-KRMKADSDNARSSPAMRNLEA 120
           QAKQLSE+EVS+ST LLGQLE+LLP GP    RR+I+K KRMKADSDNARSSPAMRNLEA
Sbjct: 128 QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA 187

Query: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180
           CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP
Sbjct: 188 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 247

Query: 181 MSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240
           MSAIISFPKRNDPST+PEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE
Sbjct: 248 MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 307

Query: 241 EDGSSTLPQRTVPFHKVVALPEGLRQ 264
           EDGSSTLPQR VPFHKVVALPEGLRQ
Sbjct: 308 EDGSSTLPQRIVPFHKVVALPEGLRQ 333

[Close]

BLAST of IVF0003309.1 vs. NCBI nr
Match: XP_008464931.1 (PREDICTED: uncharacterized protein LOC103502684 isoform X1 [Cucumis melo] >XP_008464932.1 PREDICTED: uncharacterized protein LOC103502684 isoform X1 [Cucumis melo] >KAA0057239.1 SAGA-associated factor 29-like protein [Cucumis melo var. makuwa] >TYK18722.1 SAGA-associated factor 29-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 518 bits (1335), Expect = 2.57e-185
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60

Query: 61  QAKQLSEDEVSVSTTLLGQLETLLPGPVQQRRKIDKKRMKADSDNARSSPAMRNLEACAN 120
           QAKQLSEDEVSVSTTLLGQLETLLPGPVQQRRKIDKKRMKADSDNARSSPAMRNLEACAN
Sbjct: 61  QAKQLSEDEVSVSTTLLGQLETLLPGPVQQRRKIDKKRMKADSDNARSSPAMRNLEACAN 120

Query: 121 MKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLPMSA 180
           MKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLPMSA
Sbjct: 121 MKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLPMSA 180

Query: 181 IISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDEEDG 240
           IISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDEEDG
Sbjct: 181 IISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDEEDG 240

Query: 241 SSTLPQRTVPFHKVVALPEGLRQ 263
           SSTLPQRTVPFHKVVALPEGLRQ
Sbjct: 241 SSTLPQRTVPFHKVVALPEGLRQ 263

[Close]

BLAST of IVF0003309.1 vs. NCBI nr
Match: XP_038905992.1 (SAGA-associated factor 29 homolog A isoform X1 [Benincasa hispida])

HSP 1 Score: 487 bits (1254), Expect = 6.38e-173
Identity = 253/266 (95.11%), Postives = 256/266 (96.24%), Query Frame = 0


Query: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS DIDGIL NTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 1   MSSVDIDGILFNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60

Query: 61  QAKQLSEDEVSVSTTLLGQLETLLPG--PVQQRRKIDK-KRMKADSDNARSSPAMRNLEA 120
           QAKQLSEDEVSVSTTLLGQLE+LLP   P Q RR+I+K KRMKADSDNAR SPAMRNLEA
Sbjct: 61  QAKQLSEDEVSVSTTLLGQLESLLPAGPPGQPRRRIEKPKRMKADSDNARLSPAMRNLEA 120

Query: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180
           CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP
Sbjct: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180

Query: 181 MSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240
           MSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVN HRKRKTDDYLLEFDDDE
Sbjct: 181 MSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNGHRKRKTDDYLLEFDDDE 240

Query: 241 EDGSSTLPQRTVPFHKVVALPEGLRQ 263
           EDGSSTLPQRTVPFHKVVALPEGLRQ
Sbjct: 241 EDGSSTLPQRTVPFHKVVALPEGLRQ 266

[Close]

BLAST of IVF0003309.1 vs. NCBI nr
Match: XP_022989563.1 (uncharacterized protein LOC111486624 [Cucurbita maxima] >XP_023530396.1 uncharacterized protein LOC111792984 [Cucurbita pepo subsp. pepo] >KAG6588935.1 SAGA-associated factor 29-like A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022704.1 SAGA-associated factor 29 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 483 bits (1243), Expect = 3.03e-171
Identity = 250/266 (93.98%), Postives = 254/266 (95.49%), Query Frame = 0


Query: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS DIDGIL NTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 1   MSSLDIDGILVNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60

Query: 61  QAKQLSEDEVSVSTTLLGQLETLLPG--PVQQRRKIDK-KRMKADSDNARSSPAMRNLEA 120
           QAKQLSEDEVSVSTTLLGQLETLLP   P Q RR+I+K KRMKAD DNAR SPAMRNLEA
Sbjct: 61  QAKQLSEDEVSVSTTLLGQLETLLPAGPPGQPRRRIEKAKRMKADPDNARLSPAMRNLEA 120

Query: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180
           CAN+KDEQVAARVTPDGAEKDEWFIVKV+HFDKETKLFEVLDEEPGDEDEGGGQRKYKLP
Sbjct: 121 CANLKDEQVAARVTPDGAEKDEWFIVKVMHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180

Query: 181 MSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240
           MSAII FPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVN HRKRKTDDYLLEFDDDE
Sbjct: 181 MSAIIPFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNGHRKRKTDDYLLEFDDDE 240

Query: 241 EDGSSTLPQRTVPFHKVVALPEGLRQ 263
           EDGSSTLPQRTVPFHKVVALPEGLRQ
Sbjct: 241 EDGSSTLPQRTVPFHKVVALPEGLRQ 266

[Close]

BLAST of IVF0003309.1 vs. NCBI nr
Match: XP_022928184.1 (uncharacterized protein LOC111435081 [Cucurbita moschata])

HSP 1 Score: 482 bits (1240), Expect = 8.68e-171
Identity = 249/266 (93.61%), Postives = 254/266 (95.49%), Query Frame = 0


Query: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS DIDGIL NTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 1   MSSLDIDGILVNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60

Query: 61  QAKQLSEDEVSVSTTLLGQLETLLPG--PVQQRRKIDK-KRMKADSDNARSSPAMRNLEA 120
           QAKQLSEDEVSVSTTLLGQLETLLP   P Q RR+I+K KRMKAD DNAR SPAMRNLEA
Sbjct: 61  QAKQLSEDEVSVSTTLLGQLETLLPAGPPGQPRRRIEKAKRMKADPDNARLSPAMRNLEA 120

Query: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180
           CAN+KDEQVAARVTPDGAEKDEWFIVKV+HFDKETKLFEVLDEEPGDEDEGGGQRKYKLP
Sbjct: 121 CANLKDEQVAARVTPDGAEKDEWFIVKVMHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180

Query: 181 MSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240
           MSAII FPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVN HRKRKTDDY+LEFDDDE
Sbjct: 181 MSAIIPFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNGHRKRKTDDYVLEFDDDE 240

Query: 241 EDGSSTLPQRTVPFHKVVALPEGLRQ 263
           EDGSSTLPQRTVPFHKVVALPEGLRQ
Sbjct: 241 EDGSSTLPQRTVPFHKVVALPEGLRQ 266

[Close]

BLAST of IVF0003309.1 vs. NCBI nr
Match: XP_004141115.1 (SAGA-associated factor 29 homolog A [Cucumis sativus] >XP_011652304.1 SAGA-associated factor 29 homolog A [Cucumis sativus])

HSP 1 Score: 481 bits (1238), Expect = 1.75e-170
Identity = 249/266 (93.61%), Postives = 257/266 (96.62%), Query Frame = 0


Query: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS DI+GILG+TKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 1   MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60

Query: 61  QAKQLSEDEVSVSTTLLGQLETLLP-GPV-QQRRKIDK-KRMKADSDNARSSPAMRNLEA 120
           QAKQLSE+EVS+ST LLGQLE+LLP GP    RR+I+K KRMKADSDNARSSPAMRNLEA
Sbjct: 61  QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA 120

Query: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180
           CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP
Sbjct: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180

Query: 181 MSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240
           MSAIISFPKRNDPST+PEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE
Sbjct: 181 MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240

Query: 241 EDGSSTLPQRTVPFHKVVALPEGLRQ 263
           EDGSSTLPQR VPFHKVVALPEGLRQ
Sbjct: 241 EDGSSTLPQRIVPFHKVVALPEGLRQ 266

[Close]

BLAST of IVF0003309.1 vs. TAIR 10
Match: AT3G27460.1 (SGF29 tudor-like domain )

HSP 1 Score: 367.9 bits (943), Expect = 7.0e-102
Identity = 196/270 (72.59%), Postives = 229/270 (84.81%), Query Frame = 0


Query: 2   SSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYTQ 61
           SS DI GIL NTKELDRLRKEQE V++EINKMHKKL ATP++VEKPGD SLSKLK+LY Q
Sbjct: 3   SSPDIAGILDNTKELDRLRKEQEEVLVEINKMHKKLQATPEIVEKPGDISLSKLKNLYIQ 62

Query: 62  AKQLSEDEVSVSTTLLGQLETLLP-GPV-QQRRKID-----KKRMKADSDNARSSPAMRN 121
           AK+LSE EV+VS  LL QL++LLP GP  QQRRK++     +KRMK D+D  R SP+MRN
Sbjct: 63  AKELSESEVTVSNILLTQLDSLLPSGPTGQQRRKLEGNEQKRKRMKVDTDVTRVSPSMRN 122

Query: 122 -LEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRK 181
            +EA A++K EQVAARVT + AEKDEWF+VKVIHFD+ETK  EVLDEEPGD++EGGGQR 
Sbjct: 123 QIEAYASLKGEQVAARVTAEDAEKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEGGGQRT 182

Query: 182 YKLPMSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEF 241
           YKL MS I+ FPKRNDPS+  EF+PG+ VLAVYPGTTALY+ATV+++ RKRK+D+YLLEF
Sbjct: 183 YKLSMSCILPFPKRNDPSSTQEFIPGKHVLAVYPGTTALYKATVISTPRKRKSDEYLLEF 242

Query: 242 DDDEEDGSSTLPQRTVPFHKVVALPEGLRQ 264
           DDDEEDG+  LPQRTVPFHKVVALPEG RQ
Sbjct: 243 DDDEEDGA--LPQRTVPFHKVVALPEGHRQ 270

[Close]

BLAST of IVF0003309.1 vs. TAIR 10
Match: AT3G27460.2 (SGF29 tudor-like domain )

HSP 1 Score: 367.1 bits (941), Expect = 1.2e-101
Identity = 196/269 (72.86%), Postives = 228/269 (84.76%), Query Frame = 0


Query: 2   SSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYTQ 61
           SS DI GIL NTKELDRLRKEQE V++EINKMHKKL ATP++VEKPGD SLSKLK+LY Q
Sbjct: 3   SSPDIAGILDNTKELDRLRKEQEEVLVEINKMHKKLQATPEIVEKPGDISLSKLKNLYIQ 62

Query: 62  AKQLSEDEVSVSTTLLGQLETLLP-GPV-QQRRKI----DKKRMKADSDNARSSPAMRN- 121
           AK+LSE EV+VS  LL QL++LLP GP  QQRRK+     +KRMK D+D  R SP+MRN 
Sbjct: 63  AKELSESEVTVSNILLTQLDSLLPSGPTGQQRRKLGNEQKRKRMKVDTDVTRVSPSMRNQ 122

Query: 122 LEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKY 181
           +EA A++K EQVAARVT + AEKDEWF+VKVIHFD+ETK  EVLDEEPGD++EGGGQR Y
Sbjct: 123 IEAYASLKGEQVAARVTAEDAEKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEGGGQRTY 182

Query: 182 KLPMSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFD 241
           KL MS I+ FPKRNDPS+  EF+PG+ VLAVYPGTTALY+ATV+++ RKRK+D+YLLEFD
Sbjct: 183 KLSMSCILPFPKRNDPSSTQEFIPGKHVLAVYPGTTALYKATVISTPRKRKSDEYLLEFD 242

Query: 242 DDEEDGSSTLPQRTVPFHKVVALPEGLRQ 264
           DDEEDG+  LPQRTVPFHKVVALPEG RQ
Sbjct: 243 DDEEDGA--LPQRTVPFHKVVALPEGHRQ 269

[Close]

BLAST of IVF0003309.1 vs. TAIR 10
Match: AT5G40550.2 (SGF29 tudor-like domain )

HSP 1 Score: 359.8 bits (922), Expect = 1.9e-99
Identity = 194/272 (71.32%), Postives = 226/272 (83.09%), Query Frame = 0


Query: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS DI GIL NTKELDRLRK+QE V++EINKMHKKL A+P++VEKPGD SL+KLK+LY 
Sbjct: 1   MSSPDIVGILENTKELDRLRKDQEEVLVEINKMHKKLQASPEIVEKPGDISLAKLKNLYI 60

Query: 61  QAKQLSEDEVSVSTTLLGQLETLLP-GPV-QQRRKI------DKKRMKADSDNARSSPAM 120
           QAK+LSE+EV+VS  LL QL+ LLP GP  QQRRK+       +KRMK DSD  R SP+M
Sbjct: 61  QAKELSENEVTVSNILLTQLDLLLPYGPTGQQRRKLGEGNDQKRKRMKVDSDVIRLSPSM 120

Query: 121 RN-LEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQ 180
           RN +EA A++K EQVAARVT + A+KDEWF+VKVIHFD+ETK  EVLDEEPGD++EG GQ
Sbjct: 121 RNQIEAYASLKGEQVAARVTAESADKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEGSGQ 180

Query: 181 RKYKLPMSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLL 240
           R YKLPM  I+ FPKRNDPS   EF PG+ VLAVYPGTTALY+ATVV++ RKRK+D+YLL
Sbjct: 181 RTYKLPMLCILPFPKRNDPSNTQEFPPGKHVLAVYPGTTALYKATVVSTPRKRKSDEYLL 240

Query: 241 EFDDDEEDGSSTLPQRTVPFHKVVALPEGLRQ 264
           EFDDDEEDG+  LPQRTVPFHKVVALPEG RQ
Sbjct: 241 EFDDDEEDGA--LPQRTVPFHKVVALPEGHRQ 270

[Close]

BLAST of IVF0003309.1 vs. TAIR 10
Match: AT5G40550.1 (SGF29 tudor-like domain )

HSP 1 Score: 358.6 bits (919), Expect = 4.3e-99
Identity = 194/275 (70.55%), Postives = 226/275 (82.18%), Query Frame = 0


Query: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS DI GIL NTKELDRLRK+QE V++EINKMHKKL A+P++VEKPGD SL+KLK+LY 
Sbjct: 1   MSSPDIVGILENTKELDRLRKDQEEVLVEINKMHKKLQASPEIVEKPGDISLAKLKNLYI 60

Query: 61  QAKQLSEDEVSVSTTLLGQLETLLP-GPV-QQRRKI---------DKKRMKADSDNARSS 120
           QAK+LSE+EV+VS  LL QL+ LLP GP  QQRRK+          +KRMK DSD  R S
Sbjct: 61  QAKELSENEVTVSNILLTQLDLLLPYGPTGQQRRKLGVVAEGNDQKRKRMKVDSDVIRLS 120

Query: 121 PAMRN-LEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEG 180
           P+MRN +EA A++K EQVAARVT + A+KDEWF+VKVIHFD+ETK  EVLDEEPGD++EG
Sbjct: 121 PSMRNQIEAYASLKGEQVAARVTAESADKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEG 180

Query: 181 GGQRKYKLPMSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDD 240
            GQR YKLPM  I+ FPKRNDPS   EF PG+ VLAVYPGTTALY+ATVV++ RKRK+D+
Sbjct: 181 SGQRTYKLPMLCILPFPKRNDPSNTQEFPPGKHVLAVYPGTTALYKATVVSTPRKRKSDE 240

Query: 241 YLLEFDDDEEDGSSTLPQRTVPFHKVVALPEGLRQ 264
           YLLEFDDDEEDG+  LPQRTVPFHKVVALPEG RQ
Sbjct: 241 YLLEFDDDEEDGA--LPQRTVPFHKVVALPEGHRQ 273

The following BLAST results are available for this feature:

BLAST of IVF0003309.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXY6	9.9e-101	72.59	SAGA-associated factor 29 homolog A OS=Arabidopsis thaliana OX=3702 GN=SGF29A PE...	[more]
Q500Z7	6.0e-98	70.55	SAGA-associated factor 29 homolog B OS=Arabidopsis thaliana OX=3702 GN=SGF29B PE...	[more]
Q5ZL38	4.9e-07	25.68	SAGA-associated factor 29 OS=Gallus gallus OX=9031 GN=SGF29 PE=2 SV=1	[more]
Q96ES7	9.2e-06	25.09	SAGA-associated factor 29 OS=Homo sapiens OX=9606 GN=SGF29 PE=1 SV=1	[more]
Q9DA08	1.6e-05	25.44	SAGA-associated factor 29 OS=Mus musculus OX=10090 GN=Sgf29 PE=2 SV=1	[more]

BLAST of IVF0003309.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CML7	9.8e-144	100.00	uncharacterized protein LOC103502684 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3D5D4	9.8e-144	100.00	SAGA-associated factor 29-like protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1JQN7	4.6e-133	93.98	uncharacterized protein LOC111486624 OS=Cucurbita maxima OX=3661 GN=LOC111486624...	[more]
A0A6J1EK50	1.0e-132	93.61	uncharacterized protein LOC111435081 OS=Cucurbita moschata OX=3662 GN=LOC1114350...	[more]
A0A0A0LCH2	1.7e-132	93.61	SGF29 C-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G8...	[more]

BLAST of IVF0003309.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464931.1	2.57e-185	100.00	PREDICTED: uncharacterized protein LOC103502684 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_038905992.1	6.38e-173	95.11	SAGA-associated factor 29 homolog A isoform X1 [Benincasa hispida]	[more]
XP_022989563.1	3.03e-171	93.98	uncharacterized protein LOC111486624 [Cucurbita maxima] >XP_023530396.1 uncharac...	[more]
XP_022928184.1	8.68e-171	93.61	uncharacterized protein LOC111435081 [Cucurbita moschata]	[more]
XP_004141115.1	1.75e-170	93.61	SAGA-associated factor 29 homolog A [Cucumis sativus] >XP_011652304.1 SAGA-assoc...	[more]

BLAST of IVF0003309.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27460.1	7.0e-102	72.59	SGF29 tudor-like domain	[more]
AT3G27460.2	1.2e-101	72.86	SGF29 tudor-like domain	[more]
AT5G40550.2	1.9e-99	71.32	SGF29 tudor-like domain	[more]
AT5G40550.1	4.3e-99	70.55	SGF29 tudor-like domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010750	SGF29 tudor-like domain	PFAM	PF07039	DUF1325	coord: 123..258 e-value: 5.6E-31 score: 107.4
IPR010750	SGF29 tudor-like domain	PROSITE	PS51518	SGF29_C	coord: 116..263 score: 38.845879
None	No IPR available	GENE3D	2.30.30.140		coord: 187..262 e-value: 1.7E-18 score: 68.3
None	No IPR available	GENE3D	2.30.30.140		coord: 124..186 e-value: 2.0E-11 score: 45.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..104
None	No IPR available	PANTHER	PTHR21539:SF0	SAGA-ASSOCIATED FACTOR 29	coord: 6..263
IPR037802	SAGA-associated factor 29	PANTHER	PTHR21539	UNCHARACTERIZED	coord: 6..263

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0003309	IVF0003309	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0003309.1-five_prime_utr	IVF0003309.1-five_prime_utr-chr04:25284783..25284947	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0003309.1-exon	IVF0003309.1-exon-chr04:25284783..25285065	exon
IVF0003309.1-exon	IVF0003309.1-exon-chr04:25285681..25285774	exon
IVF0003309.1-exon	IVF0003309.1-exon-chr04:25285960..25286030	exon
IVF0003309.1-exon	IVF0003309.1-exon-chr04:25286884..25286975	exon
IVF0003309.1-exon	IVF0003309.1-exon-chr04:25287111..25287196	exon
IVF0003309.1-exon	IVF0003309.1-exon-chr04:25287715..25287768	exon
IVF0003309.1-exon	IVF0003309.1-exon-chr04:25287887..25288040	exon
IVF0003309.1-exon	IVF0003309.1-exon-chr04:25288203..25288216	exon
IVF0003309.1-exon	IVF0003309.1-exon-chr04:25289049..25289442	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0003309.1-cds	IVF0003309.1-cds-chr04:25284948..25285065	CDS
IVF0003309.1-cds	IVF0003309.1-cds-chr04:25285681..25285774	CDS
IVF0003309.1-cds	IVF0003309.1-cds-chr04:25285960..25286030	CDS
IVF0003309.1-cds	IVF0003309.1-cds-chr04:25286884..25286975	CDS
IVF0003309.1-cds	IVF0003309.1-cds-chr04:25287111..25287196	CDS
IVF0003309.1-cds	IVF0003309.1-cds-chr04:25287715..25287768	CDS
IVF0003309.1-cds	IVF0003309.1-cds-chr04:25287887..25288040	CDS
IVF0003309.1-cds	IVF0003309.1-cds-chr04:25288203..25288216	CDS
IVF0003309.1-cds	IVF0003309.1-cds-chr04:25289049..25289157	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0003309.1-three_prime_utr	IVF0003309.1-three_prime_utr-chr04:25289158..25289442	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0003309.1	IVF0003309.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000124	SAGA complex