IVF0002284.4 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0002284.4
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	methyl-CpG-binding domain-containing protein 8 isoform X1
Location	chr03: 24993750 .. 25004163 (+)
Sequence length	1154
RNA-Seq Expression	IVF0002284.4
Synteny	IVF0002284.4

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTCTCCCTCCCTTTTTTCCGCAATTTTCAGAATCTCATGCCATATCTATGGCTTCCACAACTATGGTTCCTTCCTCTTCCAACGATAGTTACCGCATGAATCCTCTTCCGATTATAGATCTCCGTCTCCTCTCCCAATCCGAGCTCCATTGTCTTTCCCGTTTCTCCTCCTCCTCATCTTCTTCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATCGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAAAACAAACCTATTCCCGTCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCTTCCTCCTCCACAATTCGCCCTCAATCCTCCGACCGCCTCGATACAGAGAGCGCTCAAATTGTTCATCTCTTTAATCAACTCTTTGTTGGAGATTCTCATTGTGCCGTCAACGATAGTCACGGCGACGGAGATGAAGACCTGGTCCTTGTTAACCATACTTACGATGAATCGGTACCGGATTCTTCTTACGCTATCTTCCAGAGTATTCCTGTGGATGTTATCGATAGCAGTCACGCTCCGATTAAGCGTCGTAGAGGACGACCGCGGAAGGATAGCAATCGGTTTGTTCAGAGCAATGGAAATGCGGCTCCGGAATTCAAAAGCGGAAGCGATAAACCGGCGGGCGCGGCGGCAGAGGAGGAGATCGTAATGGTAATGCTGTGAACCTGGTCGCTTCGACCTACCTTTAGATGTAAGATAAACTGTGGAATTGTTCGTTCTTTAATTTGATTTCTGGTTCTTTGCTATATTTTATATATTATTTGCCTTTTCTTTTCCAAATTTATTGAAATAATTTTTTGAACCTCTCATGAAACAGATAGATATATAGATAGAAAGAAAGAAAATGCTTCGATAACAGTATTTTGATTTTCGATTCTTATTTGTTAACAATAAAAAAATGCAATGTTCGTTATTTATTTAGGTTTTCCAATTTCTTTTTTTCAAATTTTTTTTTTGTTTTGTAAAAAAGTACATTTTTTGTTAATCATCTATTGTGTAATTATTTAGGTTTCCATTTTCTTTTTCTTCCATTGAACGTTGCTTTGTTATTTTCTTTCTCAAAATTTTTATTTTTTAATTTTATTTTCATTTGAAGTGCATGCGTGTATTTTTGCTTTTGTTTTACACTATTGTCATACATGCTGTGCCTCTTCCTATGTGAATTTATATATTTTGGTAATATTTGTTTGTAAATTGTCTGACTTGTTTTTTTTTTTCGTTTTTTACTTATTAGTTTATTGGTTTTTTCATAATTCAACCATTTTGTCTTTGATGTTATAATTTCTTGAAATTTACCACCAGATTTCCTGATTTAATTAGACTCCTTTCATTTATGAGTTCTACCATTAGGGTGATTCGAACTTATGACATTTAGCCAATTAGATATCCCAGATATTTGGTTAACTGTTAGAATCAATCCTTTCCCAACTATAGGTTTCTTGAAATTTTAGTATACCATACCATAGGAGTTAGAAGTACAATAATTCATTTCAAAATAAAAAATGTCACCAAGACTCAACTACCAAAAACACCTCAATTTGAGTAAACTTAGCTCTTATGCAATTAATTAATACTAAGTTGAACTTTTGTTTAAGAAGCTTTTATTAGAAACTAAGCAAATTATTGTAAGAACATAGTAATTTTCGTATAGATGGAGTGTCCATTTAGATGGGCTCAAAGAGAATGAGTTCAAACCATAGGGTTAACATATCCAAGATTTCAAATCCTATAAATTTCAACATAATCAAATATTGCAGGGTAATCGTACGTGAGAAATCTTCATCAACAGGGATATTTTGTGTCCTTGTTTTTCTTCCTTCGCTTGAGCTCCATTTCATCTCTAACGTAAGCTATAATTTCGACGGAATAAGGAGTGTTCACATTACCTGAAAAGATCTTTCAAGTATATTAGGGACAGACCCAGATGTCGACATATCCATACCTTTGCAAAAGTTGGCTTCTGTGTGGAAATTTGAGTTGTCCGCAATCCACTCTAGAATTATTCATCTCTCGAACCTCAGAATTTCTTATAAAATTCCACAACTTCAATCAAATCTTCCATCCATTCTTAAATATCGAGTATCATCAGTAAAATGCAAGAATGGGGATATCCGAACTGTAGTTTTGGTTTCCACTTAATCAAGTTTCAAATTTTGTGATCCTTCGAGTCTTAGATTACTCTCAATTTAGTTCCGGGAGGATTAATCATTCAGGGAAATCTCTTCGTGAAGCAGATAAGTAAAAGCTATACTTTGGACAAAGAAGATGCTATGCAATGATGGTAGTAGGTTGCAGAGAACACCCTATAGAGCAAGGAAGAGTGGGTCATTATTTGTAGTTCAGACTTCCACAAGTTTTATTTGAGGGTCGGAGGAGATGATTTTGACATCGTGACATCTTTAAAGAATTATTTGCATGATTCTTGGGTATTATTTGAGGTTTAATATTGTTGAGCTCTATATTTGCTAGTTCAGTTCGAGGCTGCTCCATATTATTGTTGAAGTCCTGGCTAAATATACAGCTGCACATTTGGGATAATGAGCGGAGTTCTTAAGTCTGAAAAGTTATGGGGCCTGAAAAATTGTCAGTAGTGGAGTCTGCTTTATAATAAGTTAATGAAAACATAAAAGTAATGTTTTTTTTAGTTGTGGGTGGGCCATTAACTCCCTTGATCAAACAAAAAGGGTAGTAACAACTTTATTCCTTCGAGCTCTAACTCCTTGAGCTTGTTGGTTGAATTGTCACTGTGAATGTTAACTCGTAGTATAGGCATCTGGGAATCTGCTGTGGACAATTGGTTGGCTGGAAGATTAAGATTGTGGTGTTGGCGGAAGTTCGGTAGTTGATTGTTTGTGGGAGGAAAATGTCGGAACTAACTTTCAAGTTTCAACAGTACTTGGAAAATGAAATTAAAATGGATGGTAAAGTTGTTGATGAGATGCCCTTGAAATCCGTGAAAAAGTTTTTGCTAAAACTTGGGTGCACCAGATTCGAGGTTCGGTGTCTTCATTGTCCGGCTCTATACTCGTAATAAAACCTACGCCATGGTTTTGGGATGAATTGGATTGGAATAAAGTCAGCTCAGATGAGGTTGAATTATTATTATTATTACTACTACTTTAGTAGTAATATGGACAAATTAACCATATTAGGGTCTTAATGAACTTTGATCTGCTTTTTCAAATTAAGTTTTCGAGCTTTTTGCTAACTAGTGAACTTTATTAGGATAATACTTGGGAGGAGAGATGCACTCATCCATATGATTCCCTGCTCATCACTCACATTAAAAAAGAATTAAAATAATTTAAAAAACAAATAAAAAATTTATCATATGATAAATTAGGATTAGATGGCTTAGTGAAATGTTTGAAGTATTTTTTTTTTTGACTTACAAGACATTAGTCAGAGCACTCAACTAATCATGTTCACTCAAGAGAAAGCTAGGTGAATTGACGGGATTATGTCTCTAAATCACCCCTGAAGAGGTCAACAATGTTTCACGTAATTGCAGAGTACAAAAGCTATTTTTGTGAGGATCAATGTTGGTCCTTTCAAGTGCAATAGAGGGACTAGAACTTTTGGTCGAAAATTATAGTGATTTATTCTATAGGACTTAGTGGTGAGTGAAGAAGTTATGATCAAATGTTCTTACCGCTTCTTGAGTTCAATGGCCTCGCAAAGGATTCAGTTTAGAGCGTGAGGGATAAAAGAACAAAGAAAGGGATCAAACAGAGTGACAGCCCCATAGCGTGAAGAAAAGAAGAAAACGAGAGAAATAAGGGGAGTGAGAACTAGGGATATTTAAATAACCATTTGGACTACCCAACTAAGGGTTGGGTTAGTTTTTTCTTTGGGTTGGGTTGAGTTGATTTTTATTTTTATTATGTTTTTCTGCGTTGAGTTTGGATACATTTTTTAAAATTTGGGTTAATCCAACTCAATTTTAATTTTTAATATTATTAAAATTTATATATTATAACTTGCTTTTTAGGTTAATAAAAAATATACTTAAAAAAAGAAAAGAAAATAAATATATAACCATGACAGTTCAACACAATTGGATCGAAAATCCTATTTTAGTCATTTGTGTTGCTGATTTGACCAATCTGAATATTTCGTTTGGTCTAAAAATCTCCCTAATTCAATTCCAACCCATGTATACCTCTAACAAGGGAAGAAAATATATTAAAAATAAACAAAAGGTCAAATTTTATTTGTACCCAAATATTCACCTAGTTTGTTAAAAAAGAAAGAAACACAATTAATTTGTGGTTCTTATGTTAAGTATAATTGTTTGATATATTCACGCTAGTTTGAACCTAATTGGGGCCAAGAGATATGTGGTATTTTTAAGTAGAAAGTTCGACATGGTTTTTTTTTTTTTGGAAAATAGTGACATGGTATTTTTAATGTGATTTCCTTAGAATGTCTATGTATAAATTTAACGTAAGTATATGTCTGAGAAAGGTTATTTGGAAGCGTGTAGGCCAAGTGTCAGCGTCGATGTGTAAATGTGGGGTCCAGTGTTTTCTAAAGGATTTGAAGTGATGTTTGGATTGGATGCTCGAACAATCCGTACAATGCACTAAGCCATCTCATCCAAGCTTCAAATAACATTTTTTTAAAAAAGAAAAATTGGCTAAAAGAAAATAAGTTGGATAAAACAAAAAAGGAAAGGGGAAAAATCCAGGCACGCTAAATTATTCATACGTTAGAAAATGAGTATTTTAAAAATCAGTAAATTATTGAAATTATTTACCAAAAAATTCATCAAATTTTTTATTGCTCATTTGAATTTTTGGCTAAATAGTTTTATTTTTAGTGCTATCATGACATTTCTCTTTAGAAAGTTAAACAAGAACAAGGTTTGAAATGTGAATGTGGATTGAAGTGTTGAGATCTCAAATTAAAAATAAAAATAAAAATAAATGTAAAAGTAAAAGAAAAAATCATGTTTTGATTATTTTTGGAATTTTTTTTAAAAAAATTTAAAAATTTAAAAAGACATTAAAGTTAAAAGTTTGGAAAATTATTGAACCGCAAAACTATGGAATTATTAAATATAAAAAAAGAATTTAAATTTTATTAATGATAGATACCGATTGATATCGATATCGATGAAATTTGTAAATTTGGTATATTTCGTAAATATTTTAGTTTATTTTATTATATTAGAAGATGCCCCTACAAATTTTACATTTTTTAAATAACTTAACACGTTTATTATTTATATTACATATTAGTACATTTTCTTTTACATTGCATAAATTTTCTTTTATAATATGATGAAAATGTCAAAGCTAAACCTATAGAAATGTAAAATATATCCTCGTGTCGATAAAAGTTTAATAATGTGGAGAAGACATGAATTTTTATGAGCATGCTCTTGTTTGAGACATTAATTTGTGAGAATAAGATTTATTGTTGTAGGGTGTGTCTCCACTAGATTTATTGATAATATTTCATCCCAAATCTACTTCTATTAATTAAAATAAATAATATTAAATATTAGTAGTGAATTGGCGTTTCTATTATATTATAGAATATTTGAGTAAATGGTAACAAAAATATCAACTAATTATCACTCATGTTCACATATTATTGGTTATGAAAAGTTATAACTTACTTTAGTTGTATGTTTATTTGTTCATTTAAATGAGTCTTATTGAGATTTTGAAATATATATATTTAGACATTAACATTTTCATACAAGTGTTATTATATAGTGTTGGATAGAGGTTAGAAATGTTATTATTAGTTAAGAAGATTGCTAGCTGGTAGAGGGCTTAAGTAGAGTATAAGTCGACCTTTCCTAACTATAGTGTTAGGTTAATCGTCAGTTGATCAAAATCGTTCTTTGGCTCAACTCGGTGCTGACCACCGACATGCCAATGTCTTGCTTTGGTTCCATTGTGGTTGGTTACATTGTTTAAATGACCACATTGACAGTTGATCGAGTTTGGTTGACACCAACATGAAGGGAGAACTTCAACGAACTGTTGGAGAGACCAGGAAACATGGTCAAGGAAAAGAGAAAGAAGAAGAAGAGAAGAAAGTATAATGATGGGAGGAGGTAACTACTACAAATGATTGAAAAAAGGGAAATGGAGAGGAAGATAAGATAATGTAGGTAGGAGGTAACTACCACAAAGGATTAGAAAGGCTGGAGCCGGTTTGATGTTATTGCTGATAGCATTAGATACCCTTTTTATAAAAAAAAAACGATACTAATTAAAGTTGACTGGTTAGAGCCTTAACCGGTCTATCGACTCATTTGTTGGTCTCTATTGCTCACCTCTAAAATCACCATCTAGATTGTCTAAACTATGTGTTAGTAGCATTACATATCCATTGACAAATGATAATCATAGAATATAGATAATGCGACTAACAATGAGTTTGTTTAGCCAAGTGATATCTCTCATTAAAATTGGGGTTGGGGCGAGCATGAATTTAAAACTTGAGTCGACCGACAAAAAAGTGACTGAATTGGCTTTGGTCAATTGGTTAGATGTTATATGTATGTTCGGTCGGTTAAGAAGCAATGCTCAAATCGACAAAATCGTTTGTCTTTTGTAAAAGAAACAATACAATACAAAATGCACACAATTAACACTTATCATGATACTCACCTTGGGAAGACTAAAGGTTTATACATATTCATTTGTTTTTCTTAAAATACGATACAATAAAATTTAGGGGTGAGTGTGATAGATAAGAAAAATGAGTTGTCCGATTGAACCAAAGTTAGTCGATTGGAAAGAAGAGGGGTGGATCAAAAGGTCAGTTTGGAGAAATAAAAAATCTCTAAAGTATTTCTAAAGTATTTTAAAGAACTAAACCAACCATCATAGTTGCTCAACTTTTATTCTTTGATAGTCAACGGTTAGTTTGAACATTTACTAAACTGACATTGTTAGCTGAATGATCGAAAAATCGACTCTGACCACCGATGCACATCTTTAATAAAATTAATTTTATTAGCTTTTTAATTAAACAATCAATTTCCACCGTTAAAGTCCATTTAAACGGTTAATTTCACATCAACAACCTCCATATAAAGAGATTTTTATGGGAAAGAAACAAACTTCAAAAAAGCCCAAAACCAAGGGGGTAACGAACACAAAAGGTCCCCTAAGATAGCTTCATCTTACTGGGGAAGTTAGCAAAACTTTTTCTACAATCACCTAAGGAAACAAAAGTATCAAACTAGAGAAACTAGCATCATGACGAGCTACCAATGAGCAACTCGATTTCTATCACGACAACAAAAGAGAAAGAGACATTTCTTAAGTGCATTACCAACACTGAATTATCCAATTATCTAAACCCTTAGCTCTATCAAACTATCTAATTATCCATATATAAAGTCAAAATGTTCACTAATTTTACCTGAACTGAATGGAAGAAACTTTTTCTTGTGCAAACCCTGGGGGTTTCGCCCCCAACTTCAATAGGTGGTTCCATGTTTGGGCCCCAATTATAAGTGTTTTCAACTAATTGTAACCAAACTATGATAGTATTATATTAAGTCTCTATTTGTTATAGTGTTTATTATTTCTTAGTCATTCTATCTTTTTTCTTTGTTACTATTTTCTATATGGACCAGAATACAGACTATTATAACACAAAACTATAACAATCAATTCATATTTCAAACATCCTCTAAGTAACTTGGAATCTCTTGTAGATCAGTAAATTGTAGTTTTCATTGTGAAGCTACAAAGGCATGGCATTAGAAGTGGTTTCTTTTCTATTTTTTGCTGATCTTAAATGGTTATATGCTTGTCTGTTGGTAATATTCTTGTTTCTTGTTTCACATTTTGTTTTTGTTTTCATTTCCTATTTTTGTGAAATGAAAAGTAAAGTTATATGGAGCAATTTGTTTTTACTAAAAAAGAACGATAATTGTTTGATAATTATTTTCTCTTCCGTCGATTGTTGTTTTAAAATATTAAAAATCTATTTACATATTGTTTTTATACAGAATATTCATAATGATTATATGATTATGTTATTTAATTTAACATTTATTAATTATCTCTCAAATTTAAAATATTTTTTCTTAAAAATATCATCCTTTTATTTATGTTTTTCAAATTTCAAAAATAGGAAAGAAGAAGCTGCATAGTGGTCTACTTATATTGTTATCTCTTAATCTTTTTCTATTTTGTTTATAACGGTGTGTTTGGTGACTTTTGTTTTTCTTTTTAATTCAACAATACTTGAATGGGAATTCTAACATCTGATCTTTTGGTTGAGGTAAATGTTAAGAGTGATAAATGGTCAGTCAACTTTAGGTTTTAGCTAGAATGGATGCTCAACCCTACTTTTTGTTACATGATGTTGTCGTATGGTTGATTGGTTAGTTGATTTATTATGATTAATATTTTTTTAATGATAAATTGAAATTAAATGAAAAATAAAATGTAGTTAACGATTTGATCCAATTATCCATTCCTATTCTTGTCCTCACTTATATTTCATTCTCCATCCCTACCAAATTTCTCATTAATTTAGCAGGGATTGGGGTGGGTGTTTCTCATGGGGAATTTTCCCTATTTTGTTTTTGTTTTAAAAAACAAGACAGTTAATTCAAAGAGTTGTTTTGGAATATAACAAAACTGTTGAAAATATTCATGAAAATAACAAAATGTTGATTGTGACAACCCAAATAGACATCTATCATTACTAAAGTGATAGATGATTAATTCTACGAGAAACTACTCAATTATTTTAGTAGAAGGAAATAATTCCTCATCAAATTTAAATATTCAATTTAAACAATATACCTCGAGGAAGCATGTGCTAATCGGAATTTAATGTGAGGAAAATTTCAGAAAGGCACATTGAATGGAACTACCTGGAGGATGTTTGTGGGTTGTTGTACTAGGTCATGAATAAGAAAAGCATCTATAATTATCTTGGTATCCCTTTTGTTGGACACCCTACTTTCTCTGTATTTTGGATCTGTTATAGACTATAGAGTGAGTATTTGCCTGATGAAATAAATGGAAGAAGGCTTGGATTTTCAAGGGAGTGGAGAATAACCCCTAGAGCCCAATCAGTGTTTTCAAAACGTCTCCTCTGTTATTTATCTCTCCAAAATTATAGCTGGAAAACGGGAGAAGATCGATAAGATTTCTTATTACGACTAATGTGATAACCTGAATGATTTGACTAGCTTCTATACACCTTGTTTTTTCCTGCAAGGTAATGCTCAAATGTCTATAATCGCTTTCAAAACTCATTATGTAGCTTGAACTCTTGACTTTCAAAAGCATCTTGCCTTTCAGCCGGGCCTCATCCATGGGTTTTAGCATTCAGAAAGACAATAAAAGACTTGTATGGGATGGGGTGATTTTGGTTATGAAAGCAACTGTTTAACTAATAAGAAATGAGCGGTCCTCATCAACAAATGGATTTAGATGGCTGTGCTACAAAAGGAAGTTCTTTGGAAAGATATAATGAAAGTATTTGCAGATAATATCTGTGGTGTTCGTTGTGATAAATCTAACCTGTGTCCATTACCTAGTAGCGGCTGACTCATGTTTCATAAAGAATCAGTTACTGTTAATTTATCAGTTTGGTGGATTGATTTTTTTAGTCATACGCCCATGTTTACAAAAATTAGTAGCTTTTAGACTACGAGAAAAGTGTTTCCTCTACAAGACATTCCCAGTGACCAAGACAGAAGCGTTTTAATTATTTGATAGAGGTTTTATTTTACTTTATTAGAGCCTCTCCCTTTGCTTAGGTAGGCTCTATTTTGTTTGCCCTTTTACTCTTTCATTTTCTCGATGGAAGTTTGGTTCATTATAGGGGAAGGAAAAAGGAAAAGAAGTACTCTTATGGAAGTTGATTTTGTTTTCTTCATGACCTTACTAATAATGTCTAAAATTCCATTGCAGGATCATAGTTCTTTAGGAGCTCAAGCAGACGAGGGCGGAAATGTAGACTAAAGCTGAAGTGTATAGATTCTTTAGCAATTGGTTAAGATTAACCTAGATCACGAAGGAGAATGATTTTGAATCCTTTTCTAGATAGAATTGGCTGGAAACTTTTGCTCTCACCAGAGAGACGACGAGGGTCTATTGATGCTGATACTCAAATATCTCAAGTCATGGCTCTTACTTACACACCTTGCTGCTTATTGGAGTTGTTAAGATTACAATTTTGGTCACTCAAGTAGGGAAAAAATAGTGTGAATAGTTAGTATCTCATCAAACTGATTTTTAGTTGGACTATCCCTTTGCTCAAACCACTCAAGTGCTTGAGCCAAATTGGGCTGTGTAATTGTAACAAGATTTGTACTCTTCATTTGCTTGAATTTATTTCATTGGAAAATCACTCACTTTGTTC

mRNA sequence

GCTTCTCCCTCCCTTTTTTCCGCAATTTTCAGAATCTCATGCCATATCTATGGCTTCCACAACTATGGTTCCTTCCTCTTCCAACGATAGTTACCGCATGAATCCTCTTCCGATTATAGATCTCCGTCTCCTCTCCCAATCCGAGCTCCATTGTCTTTCCCGTTTCTCCTCCTCCTCATCTTCTTCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATCGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAAAACAAACCTATTCCCGTCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCTTCCTCCTCCACAATTCGCCCTCAATCCTCCGACCGCCTCGATACAGAGAGCGCTCAAATTGTTCATCTCTTTAATCAACTCTTTGTTGGAGATTCTCATTGTGCCGTCAACGATAGTCACGGCGACGGAGATGAAGACCTGGTCCTTGTTAACCATACTTACGATGAATCGGTACCGGATTCTTCTTACGCTATCTTCCAGAGTATTCCTGTGGATGTTATCGATAGCAGTCACGCTCCGATTAAGCGTCGTAGAGGACGACCGCGGAAGGATAGCAATCGGTTTGTTCAGAGCAATGGAAATGCGGCTCCGGAATTCAAAAGCGGAAGCGATAAACCGGCGGGCGCGGCGGCAGAGGAGGAGATCGTAATGGATCATAGTTCTTTAGGAGCTCAAGCAGACGAGGGCGGAAATGTAGACTAAAGCTGAAGTGTATAGATTCTTTAGCAATTGGTTAAGATTAACCTAGATCACGAAGGAGAATGATTTTGAATCCTTTTCTAGATAGAATTGGCTGGAAACTTTTGCTCTCACCAGAGAGACGACGAGGGTCTATTGATGCTGATACTCAAATATCTCAAGTCATGGCTCTTACTTACACACCTTGCTGCTTATTGGAGTTGTTAAGATTACAATTTTGGTCACTCAAGTAGGGAAAAAATAGTGTGAATAGTTAGTATCTCATCAAACTGATTTTTAGTTGGACTATCCCTTTGCTCAAACCACTCAAGTGCTTGAGCCAAATTGGGCTGTGTAATTGTAACAAGATTTGTACTCTTCATTTGCTTGAATTTATTTCATTGGAAAATCACTCACTTTGTTC

Coding sequence (CDS)

ATGGCTTCCACAACTATGGTTCCTTCCTCTTCCAACGATAGTTACCGCATGAATCCTCTTCCGATTATAGATCTCCGTCTCCTCTCCCAATCCGAGCTCCATTGTCTTTCCCGTTTCTCCTCCTCCTCATCTTCTTCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATCGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGAAAACAAACCTATTCCCGTCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCTTCCTCCTCCACAATTCGCCCTCAATCCTCCGACCGCCTCGATACAGAGAGCGCTCAAATTGTTCATCTCTTTAATCAACTCTTTGTTGGAGATTCTCATTGTGCCGTCAACGATAGTCACGGCGACGGAGATGAAGACCTGGTCCTTGTTAACCATACTTACGATGAATCGGTACCGGATTCTTCTTACGCTATCTTCCAGAGTATTCCTGTGGATGTTATCGATAGCAGTCACGCTCCGATTAAGCGTCGTAGAGGACGACCGCGGAAGGATAGCAATCGGTTTGTTCAGAGCAATGGAAATGCGGCTCCGGAATTCAAAAGCGGAAGCGATAAACCGGCGGGCGCGGCGGCAGAGGAGGAGATCGTAATGGATCATAGTTCTTTAGGAGCTCAAGCAGACGAGGGCGGAAATGTAGACTAA

Protein sequence

MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRGRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMDHSSLGAQADEGGNVD

Homology

[Close]

BLAST of IVF0002284.4 vs. ExPASy Swiss-Prot
Match: Q9LME6 (Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=MBD8 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.7e-17
Identity = 80/176 (45.45%), Postives = 99/176 (56.25%), Query Frame = 0


Query: 20  LPIIDLRLLSQSELHCLSRFSSSSSSSSTS--QSNNEDDVLIPKIDRSVFNESAGSRKQT 79
           LP+ID RLLSQSEL  LS+ SS S SSS S   S   DD L PKIDRSVFNESAGSRKQT
Sbjct: 26  LPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQT 85

Query: 80  YSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQLFVGDSHCAVNDSHGDG 139
           + RLRLA R PQ      S   + Q  D    E  Q+  L   LF  DS+ +  +   +G
Sbjct: 86  FLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDEG 145

Query: 140 DEDLVLVNHTYDESVPDSSYAIFQSIPVDVID------SSHAPIKRRRGRPRKDSN 188
           +E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Sbjct: 146 EEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

[Close]

BLAST of IVF0002284.4 vs. ExPASy TrEMBL
Match: A0A1S3BC64 (methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488067 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.0e-120
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMDHSSLGAQADEGGNVD 235
           RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMDHSSLGAQADEGGNVD
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMDHSSLGAQADEGGNVD 234

[Close]

BLAST of IVF0002284.4 vs. ExPASy TrEMBL
Match: A0A5A7VH26 (Methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004810 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 219
           RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 218

[Close]

BLAST of IVF0002284.4 vs. ExPASy TrEMBL
Match: A0A1S3BAU3 (methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488067 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 219
           RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 218

[Close]

BLAST of IVF0002284.4 vs. ExPASy TrEMBL
Match: A0A0A0LPH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368980 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.1e-105
Identity = 210/219 (95.89%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIVHLFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHC VNDS+GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSS  PIKRRRG
Sbjct: 121 LFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKP-AGAAAEEEIVM 219
           RPRKDSNRFVQSNGNAAPEFKSG DKP A AAA+EEIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVM 219

[Close]

BLAST of IVF0002284.4 vs. ExPASy TrEMBL
Match: A0A6J1BV99 (methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005043 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.0e-88
Identity = 185/225 (82.22%), Postives = 200/225 (88.89%), Query Frame = 0


Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMV S SN+S+RMN LPIIDLRLLSQSEL+CLSRF  SSSSSSTSQSN++DDVLIP
Sbjct: 1   MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRF--SSSSSSTSQSNDDDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQF SSSSSS IRPQS +RLD ESA+I+ LF Q
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQSPERLDAESAKIITLFKQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHC V++S+GD DEDLVL+NH YDESVPDSSYAIFQSIPVD+IDSS+APIKRRRG
Sbjct: 121 LFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMDHSSLGA 226
           RPRKDSNRF QSNGNA P  KSG +K    A EEEIVMD SSLGA
Sbjct: 181 RPRKDSNRFPQSNGNAVPNSKSGCEK---RAEEEEIVMDLSSLGA 220

[Close]

BLAST of IVF0002284.4 vs. NCBI nr
Match: XP_008444842.1 (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis melo])

HSP 1 Score: 442 bits (1137), Expect = 4.21e-156
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMDHSSLGAQADEGGNVD 234
           RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMDHSSLGAQADEGGNVD
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVMDHSSLGAQADEGGNVD 234

[Close]

BLAST of IVF0002284.4 vs. NCBI nr
Match: XP_004152634.1 (methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis sativus])

HSP 1 Score: 421 bits (1083), Expect = 7.44e-148
Identity = 226/235 (96.17%), Postives = 228/235 (97.02%), Query Frame = 0


Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIVHLFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHC VNDS+GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSS  PIKRRRG
Sbjct: 121 LFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAA-EEEIVMDHSSLGAQADEGGNVD 234
           RPRKDSNRFVQSNGNAAPEFKSG DKPA AAA +EEIVMDHSSLGAQADEGGNVD
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVMDHSSLGAQADEGGNVD 235

[Close]

BLAST of IVF0002284.4 vs. NCBI nr
Match: XP_008444843.1 (PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis melo] >KAA0065145.1 methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 413 bits (1061), Expect = 1.01e-144
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG
Sbjct: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 218
           RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEEIVM 218

[Close]

BLAST of IVF0002284.4 vs. NCBI nr
Match: XP_004152635.1 (methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis sativus] >KGN62697.1 hypothetical protein Csa_022593 [Cucumis sativus])

HSP 1 Score: 392 bits (1007), Expect = 1.78e-136
Identity = 210/219 (95.89%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60
           MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIP 60

Query: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQ 120
           KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIVHLFNQ
Sbjct: 61  KIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFNQ 120

Query: 121 LFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRRG 180
           LFVGDSHC VNDS+GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSS  PIKRRRG
Sbjct: 121 LFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRRG 180

Query: 181 RPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAA-EEEIVM 218
           RPRKDSNRFVQSNGNAAPEFKSG DKPA AAA +EEIVM
Sbjct: 181 RPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAAAKEEIVM 219

[Close]

BLAST of IVF0002284.4 vs. NCBI nr
Match: XP_038885025.1 (methyl-CpG-binding domain-containing protein 8 isoform X1 [Benincasa hispida])

HSP 1 Score: 384 bits (985), Expect = 5.15e-133
Identity = 210/229 (91.70%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSS-TSQSNNEDDVLI 60
           MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRFSSSSSSSS TSQSNNEDDVLI
Sbjct: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60

Query: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFN 120
           PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV LF 
Sbjct: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120

Query: 121 QLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRR 180
           QLFVGD HCAVNDS+GDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+APIKRRR
Sbjct: 121 QLFVGDPHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180

Query: 181 GRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEE---IVMDHSSLGA 225
           GRPRKDSNRF QSNGNAAPEFKSG DKPA AAAEEE   IVMDHSSLGA
Sbjct: 181 GRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAAEEEEEEIVMDHSSLGA 229

[Close]

BLAST of IVF0002284.4 vs. TAIR 10
Match: AT1G22310.2 (methyl-CPG-binding domain 8 )

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-18
Identity = 80/176 (45.45%), Postives = 99/176 (56.25%), Query Frame = 0


Query: 20  LPIIDLRLLSQSELHCLSRFSSSSSSSSTS--QSNNEDDVLIPKIDRSVFNESAGSRKQT 79
           LP+ID RLLSQSEL  LS+ SS S SSS S   S   DD L PKIDRSVFNESAGSRKQT
Sbjct: 26  LPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQT 85

Query: 80  YSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFNQLFVGDSHCAVNDSHGDG 139
           + RLRLA R PQ      S   + Q  D    E  Q+  L   LF  DS+ +  +   +G
Sbjct: 86  FLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDEG 145

Query: 140 DEDLVLVNHTYDESVPDSSYAIFQSIPVDVID------SSHAPIKRRRGRPRKDSN 188
           +E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Sbjct: 146 EEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

The following BLAST results are available for this feature:

BLAST of IVF0002284.4 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LME6	2.7e-17	45.45	Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of IVF0002284.4 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BC64	1.0e-120	100.00	methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Cucumis melo OX=365...	[more]
A0A5A7VH26	1.1e-111	100.00	Methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo var. m...	[more]
A0A1S3BAU3	1.1e-111	100.00	methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo OX=365...	[more]
A0A0A0LPH8	2.1e-105	95.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368980 PE=4 SV=1	[more]
A0A6J1BV99	1.0e-88	82.22	methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Momordica charantia...	[more]

BLAST of IVF0002284.4 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444842.1	4.21e-156	100.00	PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis me...	[more]
XP_004152634.1	7.44e-148	96.17	methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis sativus]	[more]
XP_008444843.1	1.01e-144	100.00	PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis me...	[more]
XP_004152635.1	1.78e-136	95.89	methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis sativus] >KGN...	[more]
XP_038885025.1	5.15e-133	91.70	methyl-CpG-binding domain-containing protein 8 isoform X1 [Benincasa hispida]	[more]

BLAST of IVF0002284.4 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22310.2	1.9e-18	45.45	methyl-CPG-binding domain 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..234
None	No IPR available	PANTHER	PTHR37701:SF1	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	coord: 5..228
IPR037472	Methyl-CpG-binding domain-containing protein 8	PANTHER	PTHR37701	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	coord: 5..228

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0002284	IVF0002284	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0002284.4-five_prime_utr	IVF0002284.4-five_prime_utr-chr03:24993750..24993798	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0002284.4-exon	IVF0002284.4-exon-chr03:24993750..24994452	exon
IVF0002284.4-exon	IVF0002284.4-exon-chr03:25003713..25004163	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0002284.4-cds	IVF0002284.4-cds-chr03:24993799..24994452	CDS
IVF0002284.4-cds	IVF0002284.4-cds-chr03:25003713..25003763	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0002284.4-three_prime_utr	IVF0002284.4-three_prime_utr-chr03:25003764..25004163	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0002284.4	IVF0002284.4-protein	polypeptide